The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031367	Arcobacter trophiarum LMG 25534 chromosome, complete genome	1915613	283132	293597	1915613	tRNA	Klosneuvirus(16.67%)	8	NA	NA
AXK48196.1|283132_285688_-|tRNA	alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	35.9	1.0e-75
AXK48197.1|285885_286203_+	thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	36.6	3.8e-12
AXK48198.1|286413_287343_+	thioredoxin reductase	NA	G3MA85	Bacillus_virus	42.0	3.1e-54
AXK48199.1|287346_288120_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
AXK48200.1|288133_289480_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.7	2.6e-54
AXK48201.1|289479_290445_+	radical SAM protein, TIGR01212 family	NA	A0A2H4PQV5	Staphylococcus_phage	31.2	1.6e-13
AXK48202.1|290530_291427_-	transcriptional regulator, LysR family	NA	NA	NA	NA	NA
AXK48203.1|291542_293597_+	UvrD/REP family helicase	NA	A7KV33	Bacillus_phage	36.5	5.0e-105
>prophage 2
CP031367	Arcobacter trophiarum LMG 25534 chromosome, complete genome	1915613	518047	551822	1915613	transposase,protease	Shigella_phage(57.14%)	33	NA	NA
AXK48427.1|518047_518884_-|transposase	IS3 family transposase orfB	transposase	U5P429	Shigella_phage	50.4	8.4e-67
AXK48428.1|518931_519216_-|transposase	IS3 family transposase orfA	transposase	U5P4I9	Shigella_phage	52.4	4.4e-12
AXK48429.1|519639_520320_-	phosphate ABC transporter, ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.9	1.9e-16
AXK48430.1|520312_521185_-	phosphate ABC transporter, permease protein	NA	NA	NA	NA	NA
AXK48431.1|521181_522018_-	phosphate ABC transporter, permease protein	NA	NA	NA	NA	NA
AXK48432.1|522021_522840_-	phosphate ABC transporter, periplasmic phosphate-binding protein	NA	NA	NA	NA	NA
AXK48433.1|522997_523621_+	GATase1_PfpI_2 domain-containing protein	NA	NA	NA	NA	NA
AXK48434.1|523767_525126_+|transposase	transposase, IS4 family	transposase	NA	NA	NA	NA
AXK48435.1|525492_526053_+	SH3 domain-containing protein	NA	NA	NA	NA	NA
AXK48436.1|526049_526871_+	peptidase, M48 family	NA	NA	NA	NA	NA
AXK48437.1|526885_528694_+	hypothetical protein	NA	NA	NA	NA	NA
AXK48438.1|528746_529424_+	hypothetical protein	NA	NA	NA	NA	NA
AXK48439.1|529561_531382_+	hypothetical protein	NA	NA	NA	NA	NA
AXK48440.1|531382_532642_-	putative membrane protein	NA	NA	NA	NA	NA
AXK48441.1|532645_532906_-	transcriptional regulator, XRE family	NA	NA	NA	NA	NA
AXK48442.1|533066_533585_+	hypothetical protein	NA	NA	NA	NA	NA
AXK48443.1|533598_534693_+	hypothetical protein	NA	NA	NA	NA	NA
AXK48444.1|534758_535889_+	hypothetical protein	NA	NA	NA	NA	NA
AXK48445.1|535901_536165_+	hypothetical protein	NA	NA	NA	NA	NA
AXK48446.1|536166_537417_+	FtsK/SpoIIIE family protein	NA	A0A127AW94	Bacillus_phage	24.8	2.9e-07
AXK48447.1|537546_538221_+	hypothetical protein	NA	NA	NA	NA	NA
AXK48448.1|538211_539318_+	DUF262 domain-containing protein	NA	NA	NA	NA	NA
AXK48449.1|540167_540542_+	putative membrane protein	NA	NA	NA	NA	NA
AXK48450.1|540550_541066_-	peptide deformylase	NA	NA	NA	NA	NA
AXK48451.1|541074_541659_-|protease	serine protease ClpP	protease	A0A223W000	Agrobacterium_phage	57.1	3.0e-55
AXK48452.1|541673_542975_-	trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)	NA	NA	NA	NA	NA
AXK48453.1|543069_544200_-	polyphosphate kinase 2	NA	NA	NA	NA	NA
AXK48454.1|544196_545141_-	polyphosphate kinase 2	NA	NA	NA	NA	NA
AXK48455.1|545164_546313_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AXK48456.1|546312_547515_-	saccharopine dehydrogenase-like protein	NA	NA	NA	NA	NA
AXK48457.1|548696_549470_-	hypothetical protein	NA	NA	NA	NA	NA
AXK48458.1|550653_550938_+|transposase	IS3 family transposase orfA	transposase	U5P4I9	Shigella_phage	52.4	4.4e-12
AXK48459.1|550985_551822_+|transposase	IS3 family transposase orfB	transposase	U5P429	Shigella_phage	50.4	8.4e-67
>prophage 3
CP031367	Arcobacter trophiarum LMG 25534 chromosome, complete genome	1915613	1337760	1350604	1915613		uncultured_virus(25.0%)	12	NA	NA
AXK49249.1|1337760_1339248_-	type I restriction/modification system, methylation subunit	NA	A0A1V0SLK8	Klosneuvirus	29.0	8.0e-36
AXK49250.1|1339435_1340491_-	Fic domain-containing protein	NA	D7RWK9	Brochothrix_phage	30.7	5.9e-25
AXK49251.1|1340487_1342143_-	HNH endonuclease	NA	NA	NA	NA	NA
AXK49252.1|1342139_1344527_-	type I restriction/modification system, restriction subunit	NA	A0A291AXA8	Shigella_phage	23.3	2.0e-12
AXK49253.1|1344658_1346290_-	60 kD chaperonin (cpn60)	NA	A0A240F779	uncultured_virus	64.2	2.2e-172
AXK49254.1|1346289_1346547_-	10 kD chaperonin (cpn10)	NA	A0A221S322	uncultured_virus	42.6	5.1e-15
AXK49255.1|1346667_1347540_-	geranyl diphosphate synthase / farnesyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	26.0	1.4e-11
AXK49256.1|1347540_1347870_-	YbaB/EbfC DNA-binding family protein	NA	NA	NA	NA	NA
AXK49257.1|1347862_1348246_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
AXK49258.1|1348324_1348873_+	peptidyl-prolyl cis-trans isomerase B (WD40 domain-containing)	NA	A0A2H4UTF4	Bodo_saltans_virus	44.8	4.0e-25
AXK49259.1|1348889_1349369_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA	NA
AXK49260.1|1349410_1350604_-	exodeoxyribonuclease VII, large subunit	NA	A0A1V0SD82	Indivirus	36.9	1.5e-45
>prophage 4
CP031367	Arcobacter trophiarum LMG 25534 chromosome, complete genome	1915613	1458839	1469504	1915613	transposase	Shigella_phage(33.33%)	8	NA	NA
AXK49359.1|1458839_1460117_-	enolase	NA	A0A1X9I5Z8	Streptococcus_phage	55.3	2.0e-120
AXK49360.1|1460428_1461265_-|transposase	IS3 family transposase orfB	transposase	U5P429	Shigella_phage	50.4	8.4e-67
AXK49361.1|1461312_1461597_-|transposase	IS3 family transposase orfA	transposase	U5P4I9	Shigella_phage	52.4	4.4e-12
AXK49362.1|1461800_1464770_-	DNA mismatch repair ATPase	NA	A0A1V0SDQ0	Indivirus	34.5	5.9e-147
AXK49363.1|1464769_1465189_-	heme-binding domain-containing protein	NA	NA	NA	NA	NA
AXK49364.1|1465190_1465517_-	thioredoxin	NA	NA	NA	NA	NA
AXK49365.1|1465549_1467103_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	24.9	5.6e-08
AXK49366.1|1467452_1469504_-	integral membrane ATP-dependent zinc metallopeptidase (extracellular domain)	NA	H8ZJI5	Ostreococcus_tauri_virus	39.4	4.1e-99
>prophage 5
CP031367	Arcobacter trophiarum LMG 25534 chromosome, complete genome	1915613	1676105	1683042	1915613	tRNA	Campylobacter_virus(33.33%)	9	NA	NA
AXK49560.1|1676105_1676792_+	7-cyano-7-deazaguanine synthase	NA	A0A0E3JIZ6	Enterobacteria_phage	33.8	9.7e-29
AXK49561.1|1676793_1677321_+	6-carboxy-5,6,7,8-tetrahydropterin synthase	NA	D5GVR0	Campylobacter_virus	49.7	1.5e-42
AXK49562.1|1677307_1678072_+	7-carboxy-7-deazaguanine synthase	NA	D5GV09	Campylobacter_virus	44.8	1.5e-54
AXK49563.1|1678129_1678873_+	3-oxoacyl-[acp] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	28.6	3.2e-17
AXK49564.1|1678964_1679195_+	acyl carrier protein	NA	M4QDG5	Prochlorococcus_phage	66.1	1.4e-08
AXK49565.1|1679311_1680571_+	beta-ketoacyl-[acp] synthase II (KASII)	NA	NA	NA	NA	NA
AXK49566.1|1680618_1681554_+	acetyl-CoA carboxylase, carboxyltransferase, alpha subunit	NA	NA	NA	NA	NA
AXK49567.1|1681576_1681924_-	histidine triad nucleotide-binding protein, Hint/PKCI branch	NA	NA	NA	NA	NA
AXK49568.1|1682049_1683042_+|tRNA	phenylalanyl-tRNA synthetase, alpha subunit	tRNA	A0A2I2L4E3	Orpheovirus	33.7	4.2e-33
>prophage 6
CP031367	Arcobacter trophiarum LMG 25534 chromosome, complete genome	1915613	1873788	1880811	1915613		Clostridium_phage(16.67%)	8	NA	NA
AXK49746.1|1873788_1874226_+	DNA-binding ferritin-like protein	NA	A0A0A7RTZ1	Clostridium_phage	35.0	2.5e-14
AXK49747.1|1874315_1875467_+	drug resistance transporter, Bcr/CflA family	NA	S4TR35	Salmonella_phage	25.0	8.1e-20
AXK49748.1|1875482_1876562_-	sulfite reductase, iron-sulfur subunit	NA	NA	NA	NA	NA
AXK49749.1|1876573_1877995_-	sulfate adenylyltransferase, GTPase subunit CysN	NA	A0A1V0SGC3	Hokovirus	24.0	9.0e-29
AXK49750.1|1877978_1878890_-	sulfate adenylyltransferase, subunit CysD	NA	NA	NA	NA	NA
AXK49751.1|1878906_1879608_-	phosphoadenosine phosphosulfate reductase	NA	M4W6M9	Bacillus_phage	35.1	7.4e-08
AXK49752.1|1879616_1879847_-	DUF2061 domain-containing protein	NA	A0A1B0XTK5	Freshwater_phage	45.2	4.1e-08
AXK49753.1|1879878_1880811_-	cysteine synthase	NA	A0A1X9I5K7	Streptococcus_phage	54.7	1.7e-81
