The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	6936	55393	5015823	transposase,holin,protease	Ralstonia_phage(28.57%)	46	NA	NA
AXM30738.1|6936_7773_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AXM30739.1|7959_8766_+	M48 family peptidase	NA	NA	NA	NA	NA
AXM30740.1|9042_10236_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AXM30741.1|10389_11058_+	energy transducer TonB	NA	NA	NA	NA	NA
AXM30742.1|11142_11904_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AXM30743.1|11950_12373_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AXM30744.1|12376_12790_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AXM30745.1|13085_13853_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AXM30746.1|13863_14133_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30747.1|14207_15668_-	cardiolipin synthase	NA	NA	NA	NA	NA
AXM30748.1|16314_17325_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	37.8	9.5e-49
AXM30749.1|17596_18799_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AXM30750.1|18940_21079_+	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	40.9	5.3e-65
AXM34196.1|21289_21583_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30751.1|21699_22245_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30752.1|22358_23339_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	55.8	1.6e-88
AXM30753.1|23386_24553_-	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA	NA
AXM30754.1|24699_25266_-	DUF1295 domain-containing protein	NA	NA	NA	NA	NA
AXM30755.1|26740_27958_+	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA	NA
AXM30756.1|28585_29608_-	sugar kinase	NA	NA	NA	NA	NA
AXM30757.1|30188_31442_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30758.1|31515_32313_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM30759.1|32300_33278_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30760.1|33362_33557_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30761.1|34159_34822_-	DUF938 domain-containing protein	NA	NA	NA	NA	NA
AXM30762.1|34975_35770_-	EcsC family protein	NA	NA	NA	NA	NA
AXM34197.1|35937_36411_+	SRPBCC domain-containing protein	NA	NA	NA	NA	NA
AXM30763.1|38741_39698_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM30764.1|39745_40657_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM30765.1|41143_41542_-	host attachment protein	NA	NA	NA	NA	NA
AXM30766.1|41633_42326_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30767.1|42495_42966_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
AXM30768.1|42977_43160_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30769.1|44432_44744_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30770.1|44998_45946_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.4	4.3e-43
AXM30771.1|46086_47145_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM30772.1|47283_47565_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30773.1|47605_47878_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30774.1|47969_48155_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30775.1|48238_49219_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.5	3.7e-98
AXM30776.1|49925_50813_+	TIGR01777 family protein	NA	NA	NA	NA	NA
AXM30777.1|51118_51436_+	ATP-binding protein	NA	NA	NA	NA	NA
AXM30778.1|51895_52747_-	histidine biosynthesis protein HisIE	NA	NA	NA	NA	NA
AXM30779.1|52988_54425_+	Do family serine endopeptidase	NA	W5SAB9	Pithovirus	30.7	1.5e-10
AXM30780.1|54541_54904_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30781.1|54907_55393_+|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 2
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	84951	142296	5015823	transposase	Acidithiobacillus_phage(25.0%)	41	NA	NA
AXM30809.1|84951_86328_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
AXM30810.1|86493_88047_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30811.1|90260_90602_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34199.1|90786_93345_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AXM30812.1|93363_93624_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30813.1|93683_94446_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM30814.1|94453_96178_-	AarF/ABC1/UbiB kinase family protein	NA	A0A0P0CRE2	Ostreococcus_lucimarinus_virus	28.7	1.7e-34
AXM30815.1|96188_96401_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30816.1|96418_97360_+	DUF808 domain-containing protein	NA	NA	NA	NA	NA
AXM30817.1|97552_98917_+	glycoside hydrolase family 10 protein	NA	NA	NA	NA	NA
AXM30818.1|98913_100542_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AXM30819.1|101015_102599_+	glycogen synthase GlgA	NA	NA	NA	NA	NA
AXM30820.1|102595_104830_+	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA	NA
AXM30821.1|104832_106590_+	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
AXM30822.1|106646_108536_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
AXM30823.1|108532_111142_+	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
AXM30824.1|111164_111350_+	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
AXM30825.1|111464_113627_+	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
AXM30826.1|113643_114276_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
AXM30827.1|115077_116124_-	methylamine utilization protein	NA	NA	NA	NA	NA
AXM30828.1|117519_118476_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM30829.1|118516_118807_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30830.1|118803_119769_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM34200.1|123374_123833_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30831.1|123832_124165_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30832.1|124181_124442_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30833.1|125765_127175_+	FAD-binding protein	NA	NA	NA	NA	NA
AXM30834.1|127523_127955_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30835.1|128229_128565_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30836.1|129004_130294_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.2	2.1e-40
AXM30837.1|130301_130553_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30838.1|130912_131893_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	55.0	1.0e-87
AXM30839.1|131841_132228_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30840.1|132358_132682_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30841.1|132623_132866_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30842.1|133241_134207_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM30843.1|135878_137255_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	56.9	8.3e-80
AXM30844.1|137856_138549_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	24.2	4.4e-05
AXM30845.1|138560_139832_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30846.1|140855_141278_-	HEAT repeat domain-containing protein	NA	NA	NA	NA	NA
AXM30847.1|141339_142296_+|transposase	IS30-like element IS1112a family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.9	6.2e-42
>prophage 3
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	176994	264290	5015823	transposase,protease,tRNA	Leptospira_phage(10.0%)	54	NA	NA
AXM30866.1|176994_177960_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM30867.1|182359_183427_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXM34204.1|183382_183580_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30868.1|183561_183657_-	xylosidase	NA	NA	NA	NA	NA
AXM30869.1|183632_184160_-	xylosidase	NA	NA	NA	NA	NA
AXM30870.1|184982_187166_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
AXM30871.1|187177_190528_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
AXM30872.1|190524_193641_-	DUF3416 domain-containing protein	NA	NA	NA	NA	NA
AXM34205.1|195568_196603_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
AXM34206.1|199300_199480_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30873.1|199482_199809_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30874.1|199824_199992_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30875.1|200074_201550_+|transposase	IS5-like element ISXoo5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	67.1	1.4e-101
AXM30876.1|203158_204679_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AXM30877.1|204695_204974_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34207.1|205163_205502_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AXM30878.1|206114_208100_+	beta-N-acetylglucosaminidase	NA	NA	NA	NA	NA
AXM30879.1|208731_209694_+|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM30880.1|210099_210912_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30881.1|211104_211716_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30882.1|212132_212990_-	polyamine aminopropyltransferase	NA	A0A1C9C533	Heterosigma_akashiwo_virus	31.5	2.9e-14
AXM30883.1|213227_215114_+	arginine decarboxylase	NA	NA	NA	NA	NA
AXM30884.1|217445_220169_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	30.2	6.3e-71
AXM34208.1|220236_222390_+	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	28.2	2.6e-27
AXM30885.1|222386_224078_+	DUF2875 domain-containing protein	NA	NA	NA	NA	NA
AXM30886.1|224613_226518_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AXM30887.1|226778_226958_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30888.1|227091_227559_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30889.1|227716_228676_+	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA	NA
AXM30890.1|228660_229278_+	YdcF family protein	NA	NA	NA	NA	NA
AXM30891.1|229320_229740_+	isopropylmalate/homocitrate/citramalate synthase	NA	NA	NA	NA	NA
AXM30892.1|229992_230898_-	lipid A hydroxylase LpxO	NA	S4VR59	Pandoravirus	39.5	2.6e-37
AXM30893.1|231146_232031_-	malonyl-[acyl-carrier protein] O-methyltransferase BioC	NA	NA	NA	NA	NA
AXM30894.1|232094_232877_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXM34209.1|232921_233683_-	pimeloyl-[acyl-carrier protein] methyl ester esterase	NA	NA	NA	NA	NA
AXM30895.1|233846_234176_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30896.1|234494_235586_+	DUF4380 domain-containing protein	NA	NA	NA	NA	NA
AXM30897.1|235654_237253_+	glucan biosynthesis protein D	NA	NA	NA	NA	NA
AXM30898.1|237417_238662_-	GAF domain-containing protein	NA	NA	NA	NA	NA
AXM30899.1|239113_239743_-	thymidine kinase	NA	A0A023W530	Serratia_phage	55.0	2.6e-52
AXM30900.1|239949_241926_+	ATP-dependent DNA helicase Rep	NA	A7KV33	Bacillus_phage	37.2	1.1e-112
AXM30901.1|243313_243979_-	DUF480 domain-containing protein	NA	NA	NA	NA	NA
AXM30902.1|244265_245276_+	5'-nucleotidase, lipoprotein e(P4) family	NA	NA	NA	NA	NA
AXM30903.1|245272_246004_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
AXM30904.1|246357_247887_-	tryptophan 7-halogenase	NA	M4T1E3	Cyanophage	28.7	1.3e-46
AXM30905.1|247996_251029_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30906.1|251327_254366_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30907.1|254530_255583_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AXM30908.1|255751_255997_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30909.1|255995_256961_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30910.1|256960_259624_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
AXM30911.1|259820_260801_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AXM30912.1|261441_261660_-	DUF465 domain-containing protein	NA	NA	NA	NA	NA
AXM34210.1|263105_264290_-|transposase	IS256-like element IS1113 family transposase	transposase	A0A218MNI5	uncultured_virus	45.4	1.0e-41
>prophage 4
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	268443	349965	5015823	transposase,tail	Arthrobacter_phage(18.75%)	60	NA	NA
AXM30918.1|268443_269400_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.2	4.8e-42
AXM34212.1|271499_272537_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
AXM30919.1|274230_275076_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.7	3.7e-06
AXM34214.1|275235_276441_+	acyl-CoA desaturase	NA	NA	NA	NA	NA
AXM34213.1|276493_276826_+	calcium-dependent protein kinase 21	NA	NA	NA	NA	NA
AXM34215.1|276874_277612_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.1	1.5e-19
AXM30920.1|277608_279081_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
AXM30921.1|279367_280549_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AXM30922.1|280620_281904_+	ergothioneine biosynthesis protein EgtB	NA	NA	NA	NA	NA
AXM30923.1|281900_282887_+	L-histidine N(alpha)-methyltransferase	NA	NA	NA	NA	NA
AXM30924.1|282931_284209_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AXM30925.1|284205_284826_-	transcriptional regulator	NA	A0A0K1LLP9	Caulobacter_phage	41.9	1.9e-07
AXM30926.1|284968_288676_-	indolepyruvate ferredoxin oxidoreductase family protein	NA	NA	NA	NA	NA
AXM30927.1|288870_289233_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30928.1|289767_290685_+	AEC family transporter	NA	NA	NA	NA	NA
AXM30929.1|291037_291670_+	ParA family protein	NA	A0A142F1W4	Mycobacterium_phage	36.6	1.6e-09
AXM30930.1|291685_292162_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AXM30931.1|292165_292738_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AXM30932.1|292734_294750_+	phospholipase D family protein	NA	NA	NA	NA	NA
AXM30933.1|295034_295463_+	hotdog fold thioesterase	NA	NA	NA	NA	NA
AXM30934.1|295582_296386_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AXM30935.1|296445_297435_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AXM30936.1|297848_299921_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AXM30937.1|300115_300727_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
AXM30938.1|301880_302687_-	META domain-containing protein	NA	NA	NA	NA	NA
AXM30939.1|302823_303621_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
AXM30940.1|303842_305252_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AXM34216.1|305529_305868_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AXM30941.1|305857_307333_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	32.2	2.0e-31
AXM30942.1|307603_308659_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXM30943.1|308651_310079_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AXM34217.1|310700_311180_+	superoxide dismutase family protein	NA	I3XM75	Mamestra_brassicae_nuclear_polyhedrosis_virus	40.6	6.1e-14
AXM34218.1|311250_311883_+	superoxide dismutase family protein	NA	M1ICI8	Paramecium_bursaria_Chlorella_virus	41.0	7.8e-17
AXM30944.1|312165_313131_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM30945.1|313218_313755_-	microcystin-dependent protein	NA	A0A0U4JYA4	Arthrobacter_phage	32.1	1.2e-10
AXM30946.1|313813_314341_-|tail	phage tail protein	tail	A0A218M5J0	Arthrobacter_phage	33.1	1.2e-15
AXM30947.1|314409_314955_-	microcystin-dependent protein	NA	A0A0U4JXW2	Arthrobacter_phage	32.9	1.9e-11
AXM30948.1|321309_322545_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXM30949.1|324110_327524_+	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA	NA
AXM30950.1|327520_331594_+	exodeoxyribonuclease V subunit beta	NA	S5MMD7	Bacillus_phage	22.5	4.1e-10
AXM30951.1|331781_334034_+	exodeoxyribonuclease V subunit alpha	NA	A0A0K2FLP8	Brevibacillus_phage	21.7	6.7e-10
AXM30952.1|334128_334410_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A222YWE2	Escherichia_phage	40.7	3.1e-10
AXM30953.1|334427_334718_+	addiction module antidote protein, HigA family	NA	M9MUN2	Rhodococcus_phage	53.8	1.5e-15
AXM30954.1|335656_337051_+	type III secretion system effector protein	NA	NA	NA	NA	NA
AXM30955.1|337153_337252_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30956.1|337500_337833_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30957.1|337973_338168_-	hypothetical protein	NA	NA	NA	NA	NA
AXM30958.1|338168_338393_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30959.1|338530_338965_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
AXM30960.1|338967_339444_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXM30961.1|339436_339769_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34219.1|339867_340563_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30962.1|340559_341318_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30963.1|341526_341775_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXM30964.1|341936_342203_+	hypothetical protein	NA	NA	NA	NA	NA
AXM30965.1|344019_344883_+	DUF2884 family protein	NA	NA	NA	NA	NA
AXM30966.1|345131_345560_-	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
AXM30967.1|345661_346120_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXM30968.1|347586_348543_-|transposase	IS30-like element IS1112 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.3	6.9e-41
AXM30969.1|348645_349965_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	578052	694371	5015823	transposase,integrase,tRNA	Ralstonia_phage(17.65%)	100	556184:556205	590914:590935
556184:556205	attL	GGGGTTTTTCAGGGGCGACTAT	NA	NA	NA	NA
AXM31109.1|578052_579195_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.8	5.3e-96
AXM34239.1|579226_579490_+	xanthomonadin biosynthesis protein	NA	NA	NA	NA	NA
AXM31110.1|581312_582188_+|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	48.2	1.2e-55
AXM31111.1|582418_584257_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AXM34240.1|584431_584698_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
AXM31112.1|584723_585269_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
AXM31113.1|585740_587048_+	MFS transporter	NA	NA	NA	NA	NA
AXM31114.1|587186_588446_+	HD-GYP domain-containing protein	NA	NA	NA	NA	NA
AXM31115.1|588687_590064_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
AXM31116.1|590393_590927_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXM31117.1|590937_592314_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.8	8.6e-77
590914:590935	attR	ATAGTCGCCCCTGAAAAACCCC	NA	NA	NA	NA
AXM31118.1|592312_592531_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31119.1|592548_592707_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AXM31120.1|592771_593782_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A0E3FNQ3	Synechococcus_phage	32.2	4.5e-14
AXM31121.1|594010_595681_-	peptide synthase	NA	NA	NA	NA	NA
AXM31122.1|595999_596383_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
AXM31123.1|596604_597507_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AXM31124.1|597503_600005_-	helicase SNF2	NA	NA	NA	NA	NA
AXM31125.1|600006_601638_-	site-specific DNA-methyltransferase	NA	A0A2K5B2C1	Erysipelothrix_phage	37.5	1.7e-63
AXM31126.1|601634_602798_-	Fic family protein	NA	NA	NA	NA	NA
AXM31127.1|602869_603886_-	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
AXM31128.1|603987_604308_-	DUF4156 domain-containing protein	NA	NA	NA	NA	NA
AXM31129.1|604693_605155_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31130.1|605181_605658_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
AXM31131.1|605999_607223_-	MFS transporter	NA	NA	NA	NA	NA
AXM31132.1|607327_607939_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31133.1|608040_608790_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31134.1|608980_610327_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXM31135.1|610311_611754_-	sensor histidine kinase	NA	NA	NA	NA	NA
AXM31136.1|611803_613531_-	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA	NA
AXM31137.1|613889_614486_+	Ax21 family protein	NA	NA	NA	NA	NA
AXM31138.1|614808_615834_-	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AXM31139.1|615849_616365_-	protein-export chaperone SecB	NA	NA	NA	NA	NA
AXM31140.1|616474_616909_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AXM31141.1|616984_617407_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34241.1|617435_617906_-	thioesterase	NA	NA	NA	NA	NA
AXM31142.1|619858_620068_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31143.1|620077_621445_+	VOC family protein	NA	NA	NA	NA	NA
AXM31144.1|621734_624875_-	AcrB/AcrD/AcrF family protein	NA	NA	NA	NA	NA
AXM31145.1|625008_628257_-	acriflavine resistance protein B	NA	NA	NA	NA	NA
AXM31146.1|628349_629594_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXM31147.1|629853_631170_+	amidohydrolase	NA	NA	NA	NA	NA
AXM31148.1|631928_632744_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	35.8	7.4e-36
AXM34242.1|633211_634396_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	2.9e-41
AXM31149.1|634537_635773_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM31150.1|635841_636231_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31151.1|636227_636431_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31152.1|636619_637576_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM31153.1|637611_638577_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM31154.1|639815_640538_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.6	1.2e-16
AXM31155.1|640548_641985_+	DUF3526 domain-containing protein	NA	NA	NA	NA	NA
AXM31156.1|641984_643253_+	DUF3526 domain-containing protein	NA	NA	NA	NA	NA
AXM31157.1|643342_645484_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXM31158.1|645568_646234_-	DUF2894 domain-containing protein	NA	NA	NA	NA	NA
AXM31159.1|646230_646905_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31160.1|646901_649559_-	DUF802 domain-containing protein	NA	NA	NA	NA	NA
AXM31161.1|649569_650319_-	DUF3348 domain-containing protein	NA	NA	NA	NA	NA
AXM31162.1|650645_650858_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31163.1|651299_651521_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31164.1|651530_651845_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
AXM31165.1|652305_653625_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM31166.1|653876_655625_-	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	34.5	4.2e-44
AXM31167.1|655714_656677_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
AXM31168.1|657439_658202_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31169.1|658970_659417_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	45.2	1.0e-23
AXM31170.1|659724_659940_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AXM31171.1|660219_661284_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	57.1	8.6e-101
AXM31172.1|661362_661719_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AXM31173.1|661946_664118_+	beta-glucosidase	NA	NA	NA	NA	NA
AXM31174.1|664780_665746_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM31175.1|666261_667497_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM31176.1|667912_668875_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM31177.1|669654_670617_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM31178.1|671250_671577_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31179.1|671612_672791_-	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA	NA
AXM31180.1|672957_673914_-|transposase	IS30 family transposase IS1112b	transposase	Q9MBM9	Staphylococcus_prophage	35.8	3.7e-42
AXM31181.1|674023_674458_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31182.1|675018_675300_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31183.1|675503_676266_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31184.1|676325_677642_-	amino acid permease	NA	NA	NA	NA	NA
AXM31185.1|677638_678415_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31186.1|679091_680054_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM31187.1|680273_681071_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31188.1|681226_682324_-	dipeptide epimerase	NA	NA	NA	NA	NA
AXM34243.1|682320_683733_-	NlpC-P60 family protein	NA	NA	NA	NA	NA
AXM31189.1|683956_684763_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
AXM31190.1|684825_685794_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM31191.1|686015_686762_+	D-alanyl-D-alanine dipeptidase	NA	NA	NA	NA	NA
AXM34244.1|687068_687266_+	CPXCG motif-containing cysteine-rich protein	NA	NA	NA	NA	NA
AXM31192.1|687476_687854_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34245.1|688079_688421_+	EF-hand domain-containing protein	NA	NA	NA	NA	NA
AXM31193.1|688315_688540_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31194.1|688533_689490_+|transposase	IS30 family transposase IS1112b	transposase	Q9MBM9	Staphylococcus_prophage	35.8	3.7e-42
AXM31195.1|689546_689771_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31196.1|689685_690126_+	EF-hand domain-containing protein	NA	NA	NA	NA	NA
AXM31197.1|690163_690916_+	HAD family hydrolase	NA	NA	NA	NA	NA
AXM31198.1|691041_692010_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM31199.1|692213_692789_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34246.1|692883_693531_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31200.1|693573_694371_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	763925	819804	5015823	transposase,protease	Erwinia_phage(25.0%)	43	NA	NA
AXM31243.1|763925_764688_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31244.1|764931_765936_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31245.1|765974_766904_-	GAF domain-containing protein	NA	NA	NA	NA	NA
AXM31246.1|767451_770340_-	insulinase family protein	NA	NA	NA	NA	NA
AXM31247.1|770594_773219_+	PAS domain S-box protein	NA	G3MA91	Bacillus_virus	28.6	1.9e-08
AXM34256.1|773744_773972_-	chemotaxis protein	NA	NA	NA	NA	NA
AXM31248.1|773971_774328_-	histidine kinase	NA	NA	NA	NA	NA
AXM34257.1|774453_775944_-	endoglucanase	NA	H2DE45	Erwinia_phage	32.3	7.7e-47
AXM31249.1|776151_777639_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	56.7	1.0e-123
AXM31250.1|778913_779711_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31251.1|779891_781541_+	peptidase M20	NA	NA	NA	NA	NA
AXM31252.1|781468_781729_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31253.1|781854_782618_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31254.1|783344_785282_+	glucans biosynthesis glucosyltransferase MdoH	NA	NA	NA	NA	NA
AXM31255.1|785433_786102_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXM31256.1|786106_787159_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	33.6	1.8e-18
AXM31257.1|787189_787927_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXM31258.1|787957_788872_+	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
AXM31259.1|789422_790223_-	DUF481 domain-containing protein	NA	NA	NA	NA	NA
AXM31260.1|790781_791747_+	YafY family transcriptional regulator	NA	NA	NA	NA	NA
AXM31261.1|791855_792425_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31262.1|792812_793124_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31263.1|793191_795285_+	S9 family peptidase	NA	NA	NA	NA	NA
AXM31264.1|795358_795799_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31265.1|796124_797309_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AXM31266.1|797488_799624_+	oligopeptidase B	NA	F2Y2Z7	Organic_Lake_phycodnavirus	26.1	2.1e-29
AXM34258.1|799967_800366_+	DUF454 domain-containing protein	NA	NA	NA	NA	NA
AXM31267.1|800423_800660_+	sugar transporter	NA	NA	NA	NA	NA
AXM31268.1|800649_801504_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
AXM31269.1|801491_802172_+	DUF484 family protein	NA	NA	NA	NA	NA
AXM34259.1|802377_803295_+	tyrosine recombinase XerC	NA	A0A142F2H8	Mycobacterium_phage	28.1	2.2e-12
AXM31270.1|803810_804362_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AXM31271.1|804503_805871_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A2H5BJT2	Erwinia_phage	29.1	6.2e-43
AXM31272.1|806044_806668_-	HAD family hydrolase	NA	NA	NA	NA	NA
AXM31273.1|806967_807687_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31274.1|807858_809871_-	M1 family peptidase	NA	NA	NA	NA	NA
AXM31275.1|809992_810883_-	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA	NA
AXM31276.1|811055_811817_-	ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE	NA	NA	NA	NA	NA
AXM31277.1|813561_814638_+	HlyD family secretion protein	NA	NA	NA	NA	NA
AXM31278.1|815888_816389_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXM31279.1|816385_816841_+	nucleoside deaminase	NA	NA	NA	NA	NA
AXM31280.1|817981_818780_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31281.1|818835_819804_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
>prophage 7
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	836374	911058	5015823	transposase,tRNA	Acidithiobacillus_phage(15.38%)	48	NA	NA
AXM31292.1|836374_837337_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM31293.1|838043_839420_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.2	1.9e-79
AXM31294.1|841113_842253_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AXM31295.1|842249_843665_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	50.6	4.3e-15
AXM31296.1|843775_844057_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31297.1|844165_845371_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.6	6.0e-66
AXM31298.1|846437_846716_+	DUF493 family protein	NA	NA	NA	NA	NA
AXM31299.1|846703_847402_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
AXM31300.1|847416_848430_+	lipoyl synthase	NA	NA	NA	NA	NA
AXM31301.1|848829_851013_+	PDZ domain-containing protein	NA	A0A0R6PIZ1	Moraxella_phage	31.6	2.8e-82
AXM34262.1|851304_852159_-	endonuclease	NA	NA	NA	NA	NA
AXM31302.1|852331_853387_+	bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase	NA	A0A1B0V161	Roseobacter_phage	47.1	1.3e-80
AXM31303.1|853509_854913_+	nicotinate phosphoribosyltransferase	NA	A0A218M332	Acidovorax_phage	51.5	8.1e-131
AXM31304.1|857170_857932_+	DUF2242 domain-containing protein	NA	NA	NA	NA	NA
AXM31305.1|858056_858437_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AXM31306.1|858608_859946_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31307.1|859966_860908_+	decarboxylating 6-phosphogluconate dehydrogenase	NA	M4SJX8	Cyanophage	44.9	5.9e-69
AXM31308.1|861246_862299_-	oxidoreductase	NA	NA	NA	NA	NA
AXM34263.1|862458_862821_+	BON domain-containing protein	NA	NA	NA	NA	NA
AXM31309.1|863106_864918_+	PAS domain S-box protein	NA	A0A2K9L0Z8	Tupanvirus	28.3	3.5e-09
AXM31310.1|864914_865355_+	response regulator	NA	NA	NA	NA	NA
AXM31311.1|865358_866861_+	hybrid sensor histidine kinase/response regulator	NA	A0A2K9L5I4	Tupanvirus	26.2	1.1e-08
AXM31312.1|866952_867468_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AXM31313.1|867636_868374_-	pteridine reductase	NA	NA	NA	NA	NA
AXM34264.1|868441_869626_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXM31314.1|871061_872297_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM31315.1|873028_875719_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM31316.1|875869_876403_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34265.1|876487_878767_+	glycoside hydrolase family 2 protein	NA	L0N6M2	Herpes_simplex_virus	28.6	5.5e-20
AXM31317.1|881334_882501_+	DUF1624 domain-containing protein	NA	NA	NA	NA	NA
AXM31318.1|882715_883483_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXM31319.1|883527_884805_+	glucose/galactose MFS transporter	NA	NA	NA	NA	NA
AXM31320.1|884845_885913_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXM31321.1|885919_886948_+	SIS domain-containing protein	NA	NA	NA	NA	NA
AXM31322.1|886950_888105_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
AXM31323.1|888524_889130_-	poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA	NA	NA	NA	NA
AXM31324.1|889126_890380_-	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA	NA
AXM31325.1|890381_892280_-	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA	NA	NA	NA	NA
AXM31326.1|892281_894324_-	poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA	NA	NA	NA	NA	NA
AXM31327.1|894949_895180_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31328.1|895641_896607_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM31329.1|900615_901378_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34266.1|902211_903444_-|tRNA	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	tRNA	K4IEX3	Salmonella_phage	41.7	2.0e-72
AXM31330.1|905090_905888_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31331.1|905942_906695_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31332.1|906705_908082_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
AXM31333.1|909191_909458_-|transposase	transposase	transposase	NA	NA	NA	NA
AXM31334.1|910101_911058_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
>prophage 8
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1036624	1096573	5015823	transposase,tRNA	Tupanvirus(16.67%)	57	NA	NA
AXM31427.1|1036624_1037387_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31428.1|1037422_1038070_+	Hemin transport protein	NA	NA	NA	NA	NA
AXM31429.1|1038224_1039023_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31430.1|1039223_1039577_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31431.1|1040541_1041381_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.6	2.6e-28
AXM34275.1|1042472_1043363_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
AXM31432.1|1043703_1046187_-	oxidoreductase	NA	NA	NA	NA	NA
AXM31433.1|1046183_1046783_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.7	2.3e-26
AXM31434.1|1046907_1047561_+	arylesterase	NA	NA	NA	NA	NA
AXM31435.1|1047619_1048366_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	33.6	2.0e-27
AXM31436.1|1048508_1049780_+	sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	27.2	1.3e-10
AXM31437.1|1050353_1051055_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31438.1|1051237_1051618_+	diacylglycerol kinase	NA	NA	NA	NA	NA
AXM31439.1|1051713_1052352_+	LemA family protein	NA	A0A0C5K8T5	Enterococcus_phage	25.4	2.5e-07
AXM31440.1|1052689_1053580_+	YgcG family protein	NA	NA	NA	NA	NA
AXM31441.1|1053579_1054071_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31442.1|1054125_1055016_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AXM31443.1|1055012_1055807_+	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	67.8	3.0e-106
AXM31444.1|1055873_1056161_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31445.1|1056157_1056652_+	dihydrofolate reductase	NA	A0A1B2IBQ4	Erwinia_phage	46.9	3.0e-24
AXM31446.1|1056705_1057662_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	S4TNS0	Salmonella_phage	25.3	1.3e-07
AXM31447.1|1057690_1058074_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AXM31448.1|1058110_1058899_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
AXM34276.1|1059155_1060124_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
AXM31449.1|1060147_1061539_-	chaperone SurA	NA	NA	NA	NA	NA
AXM34277.1|1061535_1063977_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
AXM31450.1|1064104_1065013_-	histone deacetylase family protein	NA	A0A2K9L2T7	Tupanvirus	30.8	3.4e-37
AXM31451.1|1065050_1065608_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
AXM31452.1|1065611_1066190_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31453.1|1066488_1067697_+	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA	NA
AXM31454.1|1067693_1068875_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
AXM31455.1|1069002_1069815_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXM34278.1|1070451_1071417_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM31456.1|1072500_1073397_+	gallate dioxygenase	NA	NA	NA	NA	NA
AXM31457.1|1073833_1074835_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXM31458.1|1075019_1076498_-	acyl-CoA synthetase	NA	A0A2H4PQM9	Staphylococcus_phage	27.8	1.4e-40
AXM31459.1|1076700_1078170_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AXM31460.1|1078253_1079081_-	p-hydroxycinnamoyl CoA hydratase/lyase	NA	NA	NA	NA	NA
AXM31461.1|1079126_1079600_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXM31462.1|1079727_1080135_-	EF-hand domain-containing protein	NA	NA	NA	NA	NA
AXM31463.1|1080334_1081057_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31464.1|1081139_1082045_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
AXM31465.1|1082239_1083349_+	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AXM31466.1|1083670_1084714_-	23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM	NA	NA	NA	NA	NA
AXM31467.1|1084750_1085311_-	nucleoside deaminase	NA	NA	NA	NA	NA
AXM31468.1|1085310_1085721_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31469.1|1088229_1088439_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AXM31470.1|1088643_1089406_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31471.1|1090118_1090304_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31472.1|1090496_1092236_-|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	54.8	9.9e-179
AXM31473.1|1092379_1092586_+	cellulose biosynthesis protein	NA	NA	NA	NA	NA
AXM31474.1|1092640_1093282_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AXM31475.1|1093283_1093520_+	DUF2007 domain-containing protein	NA	NA	NA	NA	NA
AXM31476.1|1093634_1094099_-	response regulator	NA	NA	NA	NA	NA
AXM31477.1|1094095_1094926_-	hybrid sensor histidine kinase/response regulator	NA	A0A2K9L5I4	Tupanvirus	38.5	3.4e-12
AXM31478.1|1094922_1095721_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34279.1|1095774_1096573_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1191441	1202268	5015823	transposase	Burkholderia_phage(28.57%)	9	NA	NA
AXM31570.1|1191441_1192398_+|transposase	IS30 family transposase IS1112	transposase	Q9MBM9	Staphylococcus_prophage	35.4	3.1e-41
AXM31571.1|1193798_1194884_-	DUF3396 domain-containing protein	NA	E5E3X8	Burkholderia_phage	37.9	4.0e-61
AXM31572.1|1194880_1195951_-	DUF3396 domain-containing protein	NA	E5E3X8	Burkholderia_phage	36.6	9.7e-60
AXM31573.1|1195958_1196654_-	VRR-NUC domain-containing protein	NA	Q8W6S1	Burkholderia_virus	46.1	2.8e-36
AXM31574.1|1196650_1197100_-	PAAR domain-containing protein	NA	A4JWV5	Burkholderia_virus	34.1	3.3e-09
AXM31575.1|1197187_1197370_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34287.1|1197429_1200384_-	glycine dehydrogenase (aminomethyl-transferring)	NA	M4QFZ1	Prochlorococcus_phage	50.1	8.1e-258
AXM31576.1|1200851_1201034_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34288.1|1201464_1202268_+	sulfotransferase	NA	M4QPS9	Synechococcus_phage	27.7	9.0e-26
>prophage 10
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1219567	1298597	5015823	transposase,plate	Microcystis_virus(33.33%)	56	NA	NA
AXM31588.1|1219567_1220366_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31589.1|1220420_1221617_+	sensor histidine kinase	NA	NA	NA	NA	NA
AXM31590.1|1221616_1222258_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXM31591.1|1222608_1223790_+	polyketide cyclase	NA	NA	NA	NA	NA
AXM31592.1|1223853_1224258_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AXM31593.1|1224260_1224935_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
AXM31594.1|1224998_1225796_-	D-alanyl-D-alanine carboxypeptidase family protein	NA	NA	NA	NA	NA
AXM31595.1|1225926_1226106_-	Arc family DNA-binding protein	NA	NA	NA	NA	NA
AXM31596.1|1226102_1226387_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31597.1|1227003_1228206_+	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AXM31598.1|1228405_1228948_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31599.1|1229222_1229963_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31600.1|1230162_1231041_+	M15 family peptidase	NA	A8ATW4	Listeria_phage	35.5	1.3e-06
AXM31601.1|1231150_1231411_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
AXM31602.1|1231470_1232952_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31603.1|1236700_1237684_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
AXM31604.1|1237680_1238511_+	OmpA family protein	NA	NA	NA	NA	NA
AXM31605.1|1238563_1239637_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AXM31606.1|1243546_1246612_+	DNA repair protein	NA	NA	NA	NA	NA
AXM31607.1|1246759_1247719_-	sulfatase modifying factor 1	NA	NA	NA	NA	NA
AXM34292.1|1247786_1248353_+	DNA repair protein	NA	NA	NA	NA	NA
AXM31608.1|1248409_1249366_-	sulfatase modifying factor 1	NA	A0A7H6	Microcystis_virus	30.5	1.2e-16
AXM31609.1|1249551_1252215_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.3	3.0e-41
AXM31610.1|1252214_1253111_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXM31611.1|1253107_1253572_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXM34293.1|1253595_1254075_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXM31612.1|1254161_1255904_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
AXM31613.1|1255985_1256531_+	DUF2345 domain-containing protein	NA	NA	NA	NA	NA
AXM31614.1|1256517_1259583_+	DNA repair protein	NA	NA	NA	NA	NA
AXM31615.1|1259635_1260598_-	sulfatase modifying factor 1	NA	A0A7H6	Microcystis_virus	30.5	1.2e-16
AXM31616.1|1260783_1263453_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.3	5.1e-41
AXM31617.1|1263449_1264274_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXM31618.1|1264266_1264881_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXM34294.1|1265354_1266152_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34295.1|1266742_1267291_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXM31619.1|1267290_1269522_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
AXM31620.1|1269502_1269892_+	DUF2345 domain-containing protein	NA	NA	NA	NA	NA
AXM31621.1|1271159_1272262_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	4.5e-44
AXM31622.1|1272230_1272446_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31623.1|1273077_1276119_-	calcium-binding protein	NA	NA	NA	NA	NA
AXM31624.1|1276143_1278681_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
AXM31625.1|1278691_1279480_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AXM31626.1|1280345_1281425_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31627.1|1281421_1282900_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31628.1|1282959_1285419_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
AXM31629.1|1285977_1286955_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31630.1|1286951_1289669_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
AXM31631.1|1289679_1290468_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AXM31632.1|1290467_1291802_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AXM31633.1|1291953_1292562_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AXM31634.1|1292948_1293437_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31635.1|1293483_1293984_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AXM31636.1|1293987_1295484_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AXM31637.1|1295625_1296123_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AXM31638.1|1296270_1296759_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AXM31639.1|1296761_1298597_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
>prophage 11
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1345338	1416241	5015823	transposase,protease	Tupanvirus(11.11%)	47	NA	NA
AXM31665.1|1345338_1346736_-|protease	serine protease	protease	NA	NA	NA	NA
AXM31666.1|1347164_1349135_+	oligopeptide transporter, OPT family	NA	NA	NA	NA	NA
AXM31667.1|1349640_1350003_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31668.1|1350259_1351105_+	transporter	NA	NA	NA	NA	NA
AXM34306.1|1351371_1353492_+	S9 family peptidase	NA	NA	NA	NA	NA
AXM31669.1|1355606_1356068_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31670.1|1356199_1356925_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXM31671.1|1357757_1359899_+	outer protein P	NA	NA	NA	NA	NA
AXM31672.1|1360015_1362148_+	outer protein P	NA	NA	NA	NA	NA
AXM34307.1|1362375_1363614_-	type III secretion system effector protein	NA	NA	NA	NA	NA
AXM31673.1|1363889_1364078_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31674.1|1364439_1366545_-	catalase HPII	NA	A0A2K9L572	Tupanvirus	48.1	5.1e-137
AXM31675.1|1367650_1368619_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM31676.1|1368818_1370138_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM31677.1|1370229_1371210_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM31678.1|1371347_1374188_+	DUF2339 domain-containing protein	NA	NA	NA	NA	NA
AXM31679.1|1374184_1375543_+	DUF3999 domain-containing protein	NA	NA	NA	NA	NA
AXM31680.1|1375606_1375834_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31681.1|1375876_1377052_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
AXM31682.1|1377048_1377693_+	HAD family hydrolase	NA	NA	NA	NA	NA
AXM31683.1|1377949_1379416_+	pyruvate kinase	NA	NA	NA	NA	NA
AXM31684.1|1380012_1381017_+	fructose-bisphosphate aldolase class I	NA	A0A0K0KVJ8	Prochlorococcus_phage	48.2	3.9e-79
AXM31685.1|1381218_1381758_-	O-acetyl-ADP-ribose deacetylase	NA	A0A0K1L687	Scale_drop_disease_virus	42.6	9.9e-29
AXM31686.1|1381953_1382460_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
AXM31687.1|1382484_1382730_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31688.1|1382766_1383726_-	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	49.0	3.8e-79
AXM31689.1|1383742_1384948_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AXM31690.1|1385115_1386099_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXM31691.1|1386109_1386391_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31692.1|1386801_1387053_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31693.1|1387460_1388657_-	sensor histidine kinase	NA	NA	NA	NA	NA
AXM31694.1|1388978_1389416_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
AXM31695.1|1389553_1391614_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM31696.1|1391613_1393206_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
AXM31697.1|1393341_1394067_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA	NA
AXM31698.1|1394063_1395785_-	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA	NA
AXM31699.1|1395893_1397741_-	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA	NA
AXM31700.1|1397921_1398830_+	sulfate adenylyltransferase subunit 2	NA	NA	NA	NA	NA
AXM31701.1|1398829_1400806_+	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	30.6	5.6e-29
AXM31702.1|1401240_1402311_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXM31703.1|1402307_1405433_+	AcrB/AcrD/AcrF family protein	NA	S5VTK5	Leptospira_phage	22.8	7.0e-74
AXM31704.1|1405784_1408454_+	M1 family peptidase	NA	A0A0P0IY26	Acinetobacter_phage	48.3	1.8e-240
AXM31705.1|1409333_1410299_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM34308.1|1410993_1411131_+	acetyltransferase	NA	NA	NA	NA	NA
AXM31706.1|1411646_1412558_+	RNA methyltransferase	NA	NA	NA	NA	NA
AXM31707.1|1414419_1414725_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31708.1|1415284_1416241_-|transposase	IS30 family transposase IS1112b	transposase	Q9MBM9	Staphylococcus_prophage	35.8	3.7e-42
>prophage 12
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1420753	1488014	5015823	transposase,protease,tRNA	Ralstonia_phage(50.0%)	54	NA	NA
AXM31711.1|1420753_1421551_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31712.1|1423381_1423657_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34310.1|1423916_1424258_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
AXM31713.1|1424315_1426178_-	SLC13 family permease	NA	NA	NA	NA	NA
AXM31714.1|1426253_1427012_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AXM31715.1|1427027_1427321_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31716.1|1427313_1428108_-	thiazole synthase	NA	NA	NA	NA	NA
AXM31717.1|1428643_1428844_-	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
AXM31718.1|1429034_1430819_+	autotransporter domain-containing esterase	NA	NA	NA	NA	NA
AXM31719.1|1431083_1431308_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31720.1|1435284_1435677_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31721.1|1435767_1436160_+	histone-like nucleoid-structuring protein	NA	NA	NA	NA	NA
AXM31722.1|1436192_1436991_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31723.1|1437862_1438625_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31724.1|1438622_1439006_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
AXM31725.1|1439009_1439972_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM31726.1|1440081_1441047_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM31727.1|1441191_1442160_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.5e-99
AXM31728.1|1442710_1444843_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
AXM31729.1|1445144_1445908_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31730.1|1446032_1446998_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM31731.1|1447523_1448492_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.1e-99
AXM31732.1|1448828_1450043_+|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
AXM31733.1|1450130_1451450_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM31734.1|1451540_1451732_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31735.1|1451699_1452713_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AXM31736.1|1452746_1452980_-	DUF378 domain-containing protein	NA	NA	NA	NA	NA
AXM31737.1|1453453_1453747_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31738.1|1454111_1454300_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31739.1|1454356_1455120_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31740.1|1455244_1456210_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM31741.1|1456509_1456959_-	DUF4442 domain-containing protein	NA	NA	NA	NA	NA
AXM31742.1|1457214_1458072_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	41.8	1.3e-11
AXM31743.1|1458276_1458888_+	DUF998 domain-containing protein	NA	NA	NA	NA	NA
AXM31744.1|1458960_1461603_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.7	2.7e-172
AXM31745.1|1462116_1462752_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31746.1|1462774_1463803_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
AXM31747.1|1463799_1464699_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA	NA
AXM31748.1|1464755_1465172_+	ribosome silencing factor	NA	NA	NA	NA	NA
AXM31749.1|1465183_1466299_+	J domain-containing protein	NA	NA	NA	NA	NA
AXM31750.1|1466624_1466834_-	DUF839 domain-containing protein	NA	NA	NA	NA	NA
AXM31751.1|1467388_1467859_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
AXM31752.1|1469274_1472388_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM31753.1|1472686_1473485_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31754.1|1473769_1474738_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM31755.1|1474950_1476270_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM31756.1|1476348_1477083_-	SIMPL domain-containing protein	NA	NA	NA	NA	NA
AXM31757.1|1477221_1477794_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AXM31758.1|1477793_1479293_+	ribonuclease G	NA	NA	NA	NA	NA
AXM31759.1|1479440_1483361_+	TIGR02099 family protein	NA	NA	NA	NA	NA
AXM34311.1|1483366_1484119_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31760.1|1484217_1485663_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
AXM31761.1|1485919_1486501_-	ribosome-associated protein	NA	NA	NA	NA	NA
AXM34312.1|1486646_1488014_+|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
>prophage 13
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1624805	1693793	5015823	transposase	Acinetobacter_phage(40.0%)	44	NA	NA
AXM34325.1|1624805_1625888_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM34326.1|1628678_1629215_-	hypothetical protein	NA	A0A2I2L3Z7	Orpheovirus	33.8	4.0e-14
AXM31865.1|1630728_1631754_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM31866.1|1631897_1632695_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31867.1|1632682_1633171_-	BrxE family protein	NA	NA	NA	NA	NA
AXM31868.1|1633202_1633523_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31869.1|1633857_1634457_+	transcriptional regulator	NA	NA	NA	NA	NA
AXM31870.1|1634453_1635377_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
AXM34327.1|1635456_1635705_-	hypothetical protein	NA	NA	NA	NA	NA
AXM31871.1|1636392_1636635_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31872.1|1637059_1637569_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31873.1|1643763_1644042_-	oxidative damage protection protein	NA	NA	NA	NA	NA
AXM31874.1|1644065_1645139_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AXM31875.1|1645617_1647234_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
AXM31876.1|1647438_1648155_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXM31877.1|1648312_1649251_+	hydroxyproline-2-epimerase	NA	NA	NA	NA	NA
AXM31878.1|1649250_1650513_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AXM31879.1|1650509_1650755_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AXM31880.1|1650726_1652061_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXM31881.1|1652057_1652966_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
AXM31882.1|1653176_1654793_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AXM31883.1|1654789_1655989_+	aminopeptidase P family protein	NA	NA	NA	NA	NA
AXM31884.1|1656106_1657939_+	DUF885 family protein	NA	NA	NA	NA	NA
AXM31885.1|1657935_1659801_+	DUF885 family protein	NA	NA	NA	NA	NA
AXM34328.1|1659863_1661450_+	amino acid permease	NA	NA	NA	NA	NA
AXM31886.1|1661439_1663779_+	S9 family peptidase	NA	NA	NA	NA	NA
AXM31887.1|1663775_1664063_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31888.1|1664118_1664310_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31889.1|1664276_1664516_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31890.1|1665152_1665497_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31891.1|1665493_1665790_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31892.1|1665996_1667568_-	peptidase S53	NA	A0A1V0SLL0	Klosneuvirus	37.6	2.3e-70
AXM31893.1|1668031_1670389_+	Tat pathway signal protein	NA	NA	NA	NA	NA
AXM31894.1|1670889_1673727_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	26.1	2.4e-49
AXM31895.1|1673965_1678330_+	carbohydrate-binding protein	NA	NA	NA	NA	NA
AXM31896.1|1678326_1679913_+	glycosyl hydrolase family 43	NA	NA	NA	NA	NA
AXM31897.1|1680234_1682580_+	S9 family peptidase	NA	NA	NA	NA	NA
AXM31898.1|1682619_1682832_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31899.1|1683076_1683508_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM34329.1|1683492_1684086_+	hypothetical protein	NA	A0A0P0I887	Acinetobacter_phage	33.0	2.1e-11
AXM31900.1|1687408_1689784_+	glycoside hydrolase family 127 protein	NA	NA	NA	NA	NA
AXM31901.1|1689898_1690697_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31902.1|1691536_1692502_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM31903.1|1692836_1693793_+|transposase	IS30 family transposase IS1112b	transposase	Q9MBM9	Staphylococcus_prophage	35.8	3.7e-42
>prophage 14
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1701488	1764852	5015823	transposase,plate	Ralstonia_phage(42.86%)	49	NA	NA
AXM31910.1|1701488_1702454_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM31911.1|1702818_1702998_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31912.1|1703437_1704400_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM31913.1|1704652_1705636_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	7.5e-99
AXM34330.1|1706075_1706333_+	stress-induced protein	NA	NA	NA	NA	NA
AXM31914.1|1707631_1708867_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM31915.1|1709623_1710394_-	phosphopantetheinyl transferase	NA	NA	NA	NA	NA
AXM31916.1|1710763_1712056_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
AXM31917.1|1712039_1713302_-	TIGR03862 family flavoprotein	NA	NA	NA	NA	NA
AXM31918.1|1713313_1713745_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
AXM31919.1|1713803_1714169_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31920.1|1714268_1715030_+	sulfurtransferase	NA	NA	NA	NA	NA
AXM31921.1|1715251_1715899_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXM31922.1|1716002_1716765_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM31923.1|1717291_1720993_-	ribonuclease E/G	NA	NA	NA	NA	NA
AXM31924.1|1721403_1722390_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AXM31925.1|1722422_1724213_-	DUF3300 domain-containing protein	NA	NA	NA	NA	NA
AXM31926.1|1724561_1724822_-	zinc transporter ZupT	NA	NA	NA	NA	NA
AXM31927.1|1724848_1725082_-	zinc transporter ZupT	NA	NA	NA	NA	NA
AXM31928.1|1725097_1725520_-	energy transducer TonB	NA	NA	NA	NA	NA
AXM31929.1|1725516_1725873_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
AXM31930.1|1725961_1726561_+	Fe-S biogenesis protein NfuA	NA	NA	NA	NA	NA
AXM31931.1|1726574_1728398_+	transmembrane repetitive protein	NA	NA	NA	NA	NA
AXM31932.1|1729055_1731890_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34332.1|1731920_1732664_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34331.1|1734568_1735525_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.6	6.2e-42
AXM31933.1|1735980_1737357_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
AXM31934.1|1737599_1738562_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM34333.1|1738718_1739465_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31935.1|1739482_1741474_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31936.1|1741526_1742483_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM31937.1|1742502_1743738_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM31938.1|1743886_1744855_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXM31939.1|1745054_1746374_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM34334.1|1747690_1748197_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AXM31940.1|1748189_1749704_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AXM31941.1|1749803_1750307_+	Hcp1 family type VI secretion system effector	NA	NA	NA	NA	NA
AXM31942.1|1750342_1751176_+	ImpE protein	NA	NA	NA	NA	NA
AXM31943.1|1751163_1751667_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AXM31944.1|1751670_1753548_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AXM31945.1|1753511_1754522_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AXM31946.1|1754554_1757260_+	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	29.3	1.5e-80
AXM31947.1|1757448_1757946_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31948.1|1758179_1758506_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31949.1|1758894_1759353_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31950.1|1759617_1761555_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	28.6	3.4e-39
AXM31951.1|1761563_1762103_+	hypothetical protein	NA	NA	NA	NA	NA
AXM31952.1|1762099_1763518_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AXM31953.1|1763514_1764852_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 15
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1874550	1886325	5015823	tRNA	Pseudomonas_phage(22.22%)	14	NA	NA
AXM34353.1|1874550_1876227_+	2-polyprenylphenol 6-hydroxylase	NA	E5EQ95	Micromonas_sp._RCC1109_virus	27.2	3.3e-38
AXM32026.1|1876315_1876957_+	LexA repressor 2	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
AXM32027.1|1877129_1878164_+	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	60.7	6.2e-112
AXM32028.1|1878212_1878416_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32029.1|1878466_1878955_+	recombination regulator RecX	NA	NA	NA	NA	NA
AXM32030.1|1879056_1881705_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.6	3.7e-84
AXM32031.1|1881844_1882057_+	carbon storage regulator	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
AXM32032.1|1882659_1883187_+	helix-turn-helix domain-containing protein	NA	A0A1W6JTD5	Pseudomonas_phage	57.4	1.2e-34
AXM32033.1|1883574_1883874_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32034.1|1883896_1884124_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32035.1|1884059_1884755_+	DNA helicase	NA	E5DV83	Deep-sea_thermophilic_phage	41.0	5.6e-16
AXM32036.1|1884759_1885509_+	isopentenyl transferase	NA	NA	NA	NA	NA
AXM32037.1|1885752_1885983_+	hypothetical protein	NA	D5LH07	Escherichia_phage	63.8	4.7e-20
AXM32038.1|1886025_1886325_+	endolysin	NA	A0A1W6JT17	Escherichia_phage	66.7	1.5e-15
>prophage 16
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1911415	1969965	5015823	transposase,tRNA	Staphylococcus_prophage(16.67%)	46	NA	NA
AXM32058.1|1911415_1912390_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.2	6.0e-32
AXM32059.1|1912458_1912824_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32060.1|1913716_1914283_-	elongation factor P-like protein YeiP	NA	NA	NA	NA	NA
AXM32061.1|1914404_1915175_-	SDR family NAD(P)-dependent oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	3.4e-14
AXM32062.1|1915313_1916210_-	hydroxymethylglutaryl-CoA lyase	NA	A0A1V0SKU2	Klosneuvirus	32.7	8.5e-33
AXM32063.1|1916280_1916670_-	VOC family protein	NA	NA	NA	NA	NA
AXM32064.1|1916666_1917464_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXM32065.1|1917578_1917827_+	ferrous iron transport protein A	NA	NA	NA	NA	NA
AXM32066.1|1917823_1919683_+	ferrous iron transporter B	NA	NA	NA	NA	NA
AXM32067.1|1919684_1919939_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32068.1|1919998_1920223_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32069.1|1920250_1920559_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34358.1|1920792_1921995_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AXM32070.1|1921991_1922711_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
AXM32071.1|1922763_1923526_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32072.1|1923936_1924653_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
AXM32073.1|1924892_1926017_+	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	32.2	7.8e-44
AXM32074.1|1926016_1926460_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32075.1|1926468_1929711_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
AXM32076.1|1929707_1930184_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
AXM32077.1|1930200_1931121_+	phosphoglycerate mutase	NA	NA	NA	NA	NA
AXM32078.1|1931117_1932857_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	27.8	1.3e-42
AXM32079.1|1933403_1934723_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32080.1|1936386_1937343_+|transposase	IS30 family transposase IS1112a	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
AXM32081.1|1937637_1938015_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32082.1|1938175_1938877_-|transposase	DDE transposase	transposase	A9YX10	Burkholderia_phage	32.9	1.9e-16
AXM32083.1|1941684_1942632_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
AXM32084.1|1942885_1944010_+	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.7	9.4e-05
AXM32085.1|1944214_1945732_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	39.9	2.3e-86
AXM32086.1|1945873_1947010_+	two-component system response regulator	NA	NA	NA	NA	NA
AXM32087.1|1947011_1947350_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32088.1|1947374_1949552_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	32.8	3.0e-47
AXM32089.1|1949563_1950433_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXM32090.1|1950609_1952292_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.8	7.1e-33
AXM32091.1|1952941_1955710_-	aconitate hydratase AcnA	NA	NA	NA	NA	NA
AXM32092.1|1955857_1956106_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AXM32093.1|1956102_1956513_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
AXM32094.1|1956578_1959170_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
AXM32095.1|1959523_1960339_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AXM34359.1|1960994_1963238_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AXM32096.1|1963346_1964423_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AXM32097.1|1964419_1965016_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AXM32098.1|1965012_1965879_-	chemotaxis protein CheR	NA	NA	NA	NA	NA
AXM32099.1|1966133_1968524_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	58.3	7.8e-09
AXM34360.1|1968602_1968947_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32100.1|1969166_1969965_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	1986780	2061253	5015823	transposase	uncultured_Caudovirales_phage(16.67%)	49	NA	NA
AXM32107.1|1986780_1987746_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM32108.1|1987870_1988633_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32109.1|1989058_1991401_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	61.7	1.2e-09
AXM32110.1|1991414_1992176_-	transporter	NA	NA	NA	NA	NA
AXM32111.1|1992491_1993178_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	36.2	2.8e-12
AXM32112.1|1995282_1997292_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
AXM32113.1|1997325_1997691_-	response regulator	NA	W8CYM9	Bacillus_phage	39.3	2.7e-14
AXM32114.1|1997687_1997996_-	STAS domain-containing protein	NA	NA	NA	NA	NA
AXM32115.1|1998096_1999119_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
AXM32116.1|1999115_1999898_-	ParA family protein	NA	Q8JL10	Natrialba_phage	37.7	1.0e-13
AXM32117.1|1999899_2000874_-	flagellar motor protein MotD	NA	NA	NA	NA	NA
AXM32118.1|2000880_2001621_-	flagellar motor protein	NA	NA	NA	NA	NA
AXM32119.1|2001709_2002063_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34363.1|2002059_2002575_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM32120.1|2002597_2002990_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM32121.1|2003141_2003849_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	51.2	8.4e-52
AXM32122.1|2003924_2004125_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32123.1|2004273_2006079_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM32124.1|2006333_2006786_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32125.1|2007280_2007469_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
AXM34364.1|2007835_2010877_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM32126.1|2011035_2012034_+	ParA family protein	NA	H2BD62	Pseudomonas_phage	41.4	8.5e-42
AXM32127.1|2011996_2013211_+|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
AXM32128.1|2013392_2014349_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM32129.1|2014607_2014985_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32130.1|2014926_2015232_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32131.1|2015228_2015645_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA	NA
AXM32132.1|2016749_2018069_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32133.1|2018296_2018611_-	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
AXM32134.1|2018543_2019503_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32135.1|2019657_2020047_+	type VI secretion protein	NA	NA	NA	NA	NA
AXM32136.1|2027701_2028631_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXM32137.1|2028627_2031465_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32138.1|2031489_2032224_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32139.1|2034303_2035260_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM32140.1|2035505_2036894_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32141.1|2037093_2038062_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM34365.1|2038728_2039865_-	carbohydrate porin	NA	NA	NA	NA	NA
AXM32142.1|2040183_2041926_-	PTS fructose transporter subunit EIIBC	NA	NA	NA	NA	NA
AXM32143.1|2042084_2043041_-	1-phosphofructokinase family hexose kinase	NA	NA	NA	NA	NA
AXM32144.1|2043037_2045554_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	28.5	6.3e-09
AXM32145.1|2045714_2046710_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXM32146.1|2047416_2048382_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM32147.1|2049357_2052528_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AXM32148.1|2052540_2053845_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXM32149.1|2053859_2054519_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXM32150.1|2054796_2059821_+	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
AXM32151.1|2060088_2060328_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32152.1|2060269_2061253_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.2	1.6e-96
>prophage 18
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	2087995	2141065	5015823	transposase,protease,tRNA	Bacillus_virus(11.11%)	44	NA	NA
AXM32167.1|2087995_2089315_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32168.1|2089821_2091024_+	HlyD family secretion protein	NA	NA	NA	NA	NA
AXM32169.1|2091020_2092607_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
AXM32170.1|2092593_2094105_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32171.1|2094250_2095498_+	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.3	1.2e-24
AXM32172.1|2095433_2095802_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
AXM32173.1|2095817_2096648_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AXM34367.1|2096803_2097214_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34368.1|2097468_2098833_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AXM32174.1|2098984_2099986_-	magnesium and cobalt transport protein CorA	NA	NA	NA	NA	NA
AXM32175.1|2100001_2101282_-	DUF4105 domain-containing protein	NA	NA	NA	NA	NA
AXM32176.1|2101278_2102157_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AXM32177.1|2102251_2102770_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32178.1|2102769_2103255_-	endoribonuclease YbeY	NA	NA	NA	NA	NA
AXM32179.1|2103309_2103972_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32180.1|2104383_2105370_-	PhoH family protein	NA	W8D063	Erwinia_phage	47.7	2.5e-46
AXM32181.1|2105793_2107248_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AXM32182.1|2109183_2110170_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	56.0	1.3e-29
AXM32183.1|2110699_2111344_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AXM32184.1|2111343_2112603_+	cytochrome b	NA	NA	NA	NA	NA
AXM34369.1|2112610_2113354_+	cytochrome c1	NA	NA	NA	NA	NA
AXM32185.1|2113746_2114382_+	stringent starvation protein A	NA	NA	NA	NA	NA
AXM32186.1|2114460_2114901_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	46.2	9.3e-25
AXM32187.1|2114933_2115260_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32188.1|2115470_2115887_-	DUF3301 domain-containing protein	NA	NA	NA	NA	NA
AXM32189.1|2120379_2121345_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM34370.1|2121925_2123110_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
AXM32190.1|2123513_2124482_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.5e-99
AXM32191.1|2124883_2125840_+|transposase	IS30 family transposase IS1112b	transposase	Q9MBM9	Staphylococcus_prophage	35.8	3.7e-42
AXM34371.1|2126100_2126289_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
AXM32192.1|2126773_2127052_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
AXM32193.1|2127039_2127330_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AXM34372.1|2127931_2128111_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32194.1|2128333_2128468_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32195.1|2128974_2129376_-	histone-like nucleoid-structuring protein	NA	NA	NA	NA	NA
AXM32196.1|2129789_2130140_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32197.1|2130468_2131560_-	ribonuclease D	NA	NA	NA	NA	NA
AXM32198.1|2131831_2133667_+	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	33.1	5.6e-23
AXM32199.1|2133983_2134730_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32200.1|2134947_2136210_+	virulence factor	NA	NA	NA	NA	NA
AXM32201.1|2136505_2137843_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	36.2	1.3e-37
AXM32202.1|2137988_2139056_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AXM32203.1|2139080_2140568_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AXM32204.1|2140564_2141065_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
>prophage 19
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	2182649	2223476	5015823	transposase,tRNA	Streptococcus_phage(25.0%)	35	NA	NA
AXM32236.1|2182649_2183448_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32237.1|2184435_2185404_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
AXM32238.1|2185540_2186860_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32239.1|2187083_2187572_+	general stress protein	NA	NA	NA	NA	NA
AXM32240.1|2187943_2188207_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32241.1|2189078_2189978_-	M23 family peptidase	NA	A0A075BS18	Microcystis_phage	41.2	2.6e-13
AXM32242.1|2189917_2191267_-	dihydroorotase	NA	NA	NA	NA	NA
AXM32243.1|2191263_2191545_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
AXM32244.1|2191635_2192664_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
AXM32245.1|2192806_2193868_+	peptidase S41	NA	NA	NA	NA	NA
AXM32246.1|2193935_2195186_-	MFS transporter	NA	NA	NA	NA	NA
AXM32247.1|2195182_2195620_-	SufE family protein	NA	NA	NA	NA	NA
AXM32248.1|2196117_2197548_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.5	1.1e-42
AXM32249.1|2197718_2198213_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32250.1|2198525_2199551_+	N-acetylornithine carbamoyltransferase	NA	NA	NA	NA	NA
AXM32251.1|2199622_2200864_+	argininosuccinate synthase	NA	NA	NA	NA	NA
AXM32252.1|2201105_2201558_+	N-acetyltransferase	NA	NA	NA	NA	NA
AXM32253.1|2201563_2202664_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
AXM32254.1|2202703_2204047_+	acetylglutamate kinase	NA	NA	NA	NA	NA
AXM32255.1|2204659_2205610_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
AXM32256.1|2205733_2207029_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AXM32257.1|2207025_2207394_+	cupin domain-containing protein	NA	NA	NA	NA	NA
AXM32258.1|2207393_2207654_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32259.1|2207667_2208822_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	37.2	1.0e-46
AXM32260.1|2209091_2210336_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	45.1	2.5e-91
AXM32261.1|2210703_2212617_+	CocE/NonD family hydrolase	NA	NA	NA	NA	NA
AXM32262.1|2212597_2213863_-	MFS transporter	NA	NA	NA	NA	NA
AXM32263.1|2214083_2214194_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AXM32264.1|2214572_2214836_-	cytochrome D ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AXM32265.1|2214884_2215985_-	cytochrome D ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AXM34377.1|2216136_2217873_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	26.2	8.2e-16
AXM32266.1|2217869_2219555_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	25.2	3.6e-16
AXM32267.1|2219723_2221022_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32268.1|2221028_2221994_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM32269.1|2222099_2223476_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
>prophage 20
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	2332080	2377897	5015823	transposase,protease,tRNA	uncultured_Mediterranean_phage(11.11%)	33	NA	NA
AXM32348.1|2332080_2333217_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
AXM32349.1|2333213_2333672_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AXM32350.1|2333922_2334243_+|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	1.0e-12
AXM32351.1|2334386_2336669_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	44.5	4.3e-174
AXM32352.1|2336949_2337168_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AXM34382.1|2337248_2338001_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AXM32353.1|2339428_2340550_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXM32354.1|2340607_2341576_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.5	5.9e-64
AXM32355.1|2341859_2344220_+	DNA translocase FtsK	NA	G1D482	Mycobacterium_virus	45.8	2.5e-84
AXM32356.1|2344382_2346311_+	DUF3857 domain-containing protein	NA	NA	NA	NA	NA
AXM34383.1|2346417_2347047_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
AXM32357.1|2347159_2351326_-	type III effector	NA	NA	NA	NA	NA
AXM34384.1|2351562_2352939_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.3	6.8e-74
AXM32358.1|2352970_2353297_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32359.1|2353293_2353701_-	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	49.1	5.7e-21
AXM32360.1|2353732_2354083_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32361.1|2354079_2355411_-	voltage-gated chloride channel protein	NA	A0A1X9I5Z9	Streptococcus_phage	35.2	1.5e-41
AXM32362.1|2355731_2356937_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AXM32363.1|2357094_2359467_-	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
AXM32364.1|2359491_2360124_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXM32365.1|2360343_2360769_+	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	41.7	1.1e-19
AXM32366.1|2360787_2361993_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AXM32367.1|2362003_2362792_+	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA	NA
AXM32368.1|2362788_2363649_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AXM32369.1|2363719_2364358_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32370.1|2364354_2365575_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AXM32371.1|2365585_2366983_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AXM32372.1|2367297_2368518_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AXM32373.1|2368714_2369773_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM32374.1|2370363_2370666_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32375.1|2374040_2375360_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32376.1|2375478_2376954_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.5	1.6e-76
AXM32377.1|2376931_2377897_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	2477878	2545237	5015823	transposase,tRNA	Xanthomonas_phage(62.5%)	49	NA	NA
AXM32450.1|2477878_2478937_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM32451.1|2478988_2479555_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXM32452.1|2479551_2480781_-	sensor histidine kinase	NA	NA	NA	NA	NA
AXM32453.1|2480898_2482164_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
AXM32454.1|2482144_2482876_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AXM32455.1|2483016_2484180_-	MFS transporter	NA	NA	NA	NA	NA
AXM32456.1|2484342_2485299_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.1	3.7e-42
AXM32457.1|2485858_2485993_-	aspartate racemase	NA	NA	NA	NA	NA
AXM34394.1|2486183_2487053_-	DMT family transporter	NA	NA	NA	NA	NA
AXM32458.1|2487088_2488141_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
AXM32459.1|2488137_2489193_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AXM32460.1|2489198_2489972_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXM32461.1|2489968_2490253_-	DUF4190 domain-containing protein	NA	NA	NA	NA	NA
AXM32462.1|2490841_2492374_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AXM32463.1|2493676_2496184_+	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA	NA
AXM32464.1|2496180_2497149_+	homoserine kinase	NA	NA	NA	NA	NA
AXM34395.1|2500095_2500410_-	EthD family reductase	NA	NA	NA	NA	NA
AXM32465.1|2500571_2501876_+	threonine synthase	NA	NA	NA	NA	NA
AXM32466.1|2501978_2502722_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32467.1|2503986_2505399_+|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L6G5	Tupanvirus	28.2	3.0e-40
AXM32468.1|2505904_2506703_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32469.1|2507016_2507343_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXM32470.1|2507352_2508267_+	ATP phosphoribosyltransferase	NA	NA	NA	NA	NA
AXM32471.1|2508263_2509559_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
AXM32472.1|2509555_2510647_+	histidinol-phosphate transaminase	NA	NA	NA	NA	NA
AXM32473.1|2510643_2511771_+	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase	NA	NA	NA	NA	NA
AXM32474.1|2511767_2512370_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
AXM32475.1|2512366_2513101_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA	NA
AXM32476.1|2513094_2513871_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA	NA
AXM32477.1|2513860_2514481_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA	NA
AXM32478.1|2515066_2518921_-	avirulence protein	NA	NA	NA	NA	NA
AXM32479.1|2519144_2519444_-	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	91.3	1.9e-45
AXM32480.1|2519447_2519642_-	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	79.0	1.3e-18
AXM32481.1|2519910_2523321_-	Avirulence protein AvrBs3	NA	NA	NA	NA	NA
AXM34396.1|2528201_2528954_-	ATP-binding protein	NA	NA	NA	NA	NA
AXM32482.1|2529231_2531097_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32483.1|2531086_2531812_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32484.1|2531918_2532875_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM32485.1|2532875_2533620_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32486.1|2533753_2533966_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32487.1|2534087_2534270_+	antitoxin	NA	NA	NA	NA	NA
AXM32488.1|2534394_2534631_-	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	95.5	2.6e-18
AXM32489.1|2534893_2534992_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32490.1|2535033_2535813_+	pectate lyase	NA	NA	NA	NA	NA
AXM32491.1|2536343_2539640_+	avirulence protein	NA	NA	NA	NA	NA
AXM32492.1|2539908_2540103_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	79.0	1.3e-18
AXM32493.1|2540106_2540406_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	91.3	1.9e-45
AXM32494.1|2540629_2544385_+	avirulence protein	NA	NA	NA	NA	NA
AXM32495.1|2544474_2545237_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	2550384	2617202	5015823	transposase	uncultured_Caudovirales_phage(25.0%)	55	NA	NA
AXM32499.1|2550384_2550606_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AXM32500.1|2550602_2551274_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	38.9	5.2e-27
AXM32501.1|2552452_2553415_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM32502.1|2554227_2555184_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM32503.1|2556235_2557135_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.4	9.7e-37
AXM32504.1|2557301_2557808_+	glyoxalase	NA	NA	NA	NA	NA
AXM32505.1|2558282_2558915_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AXM32506.1|2558914_2560771_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
AXM32507.1|2560767_2562267_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32508.1|2562209_2562674_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AXM32509.1|2562670_2563450_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AXM32510.1|2563741_2564782_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AXM32511.1|2564778_2566548_-	lipid A export permease/ATP-binding protein MsbA	NA	W8CYL7	Bacillus_phage	28.0	9.4e-52
AXM32512.1|2566544_2567009_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AXM32513.1|2567012_2567675_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AXM32514.1|2567703_2570112_-	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA	NA
AXM32515.1|2570365_2571331_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM32516.1|2572541_2572724_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32517.1|2572724_2573459_-	lipoprotein-releasing system ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	34.5	1.0e-31
AXM32518.1|2573451_2574693_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
AXM32519.1|2574716_2575169_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32520.1|2575119_2575368_-	succinate dehydrogenase assembly factor 2 family protein	NA	NA	NA	NA	NA
AXM32521.1|2575478_2576261_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
AXM32522.1|2576277_2576487_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32523.1|2576490_2578281_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
AXM32524.1|2578315_2578702_-	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA	NA
AXM32525.1|2578698_2579094_-	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA	NA
AXM32526.1|2579153_2579420_-	DUF1674 domain-containing protein	NA	NA	NA	NA	NA
AXM32527.1|2579363_2580236_+	folate-binding protein	NA	NA	NA	NA	NA
AXM32528.1|2580364_2581462_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	30.1	2.2e-22
AXM32529.1|2581893_2583324_+	glucose-6-phosphate dehydrogenase	NA	A0A222YYZ2	Synechococcus_phage	34.5	2.2e-67
AXM32530.1|2583320_2584328_+	glucokinase	NA	NA	NA	NA	NA
AXM32531.1|2584324_2585044_+	6-phosphogluconolactonase	NA	NA	NA	NA	NA
AXM32532.1|2585146_2587063_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
AXM32533.1|2587118_2587778_+	keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	NA	NA	NA	NA	NA
AXM32534.1|2587998_2589375_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.5	1.3e-77
AXM32535.1|2589408_2590172_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32536.1|2590214_2590418_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32537.1|2591433_2591814_+	response regulator	NA	NA	NA	NA	NA
AXM32538.1|2592028_2595424_+	PAS domain S-box protein	NA	A0A1V0SGX0	Hokovirus	27.8	2.9e-25
AXM32539.1|2596418_2599379_-|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
AXM34397.1|2600374_2600731_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AXM32540.1|2600994_2602299_-	arsenical efflux pump membrane protein ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	58.9	2.0e-128
AXM32541.1|2602317_2603043_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	3.1e-86
AXM32542.1|2603039_2603453_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	68.2	8.6e-41
AXM32543.1|2603463_2603994_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	42.6	1.8e-27
AXM32544.1|2603990_2604338_-	transcriptional regulator	NA	NA	NA	NA	NA
AXM34398.1|2605548_2607129_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AXM32545.1|2607412_2608432_+|transposase	transposase	transposase	NA	NA	NA	NA
AXM32546.1|2608482_2609958_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	65.7	4.3e-98
AXM32547.1|2610208_2611423_+|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.1e-54
AXM32548.1|2611504_2613733_-	peptidase S8 and S53, subtilisin, kexin, sedolisin	NA	NA	NA	NA	NA
AXM34399.1|2613729_2614854_-	AAA family ATPase	NA	R4TQL5	Phaeocystis_globosa_virus	32.3	2.6e-15
AXM32549.1|2615427_2615832_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32550.1|2615882_2617202_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	2735818	2876388	5015823	transposase,tRNA	uncultured_Mediterranean_phage(26.09%)	100	NA	NA
AXM32616.1|2735818_2737213_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	39.5	4.5e-81
AXM32617.1|2737214_2737472_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32618.1|2737468_2737774_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32619.1|2737770_2738097_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32620.1|2738817_2739480_+	carbonate dehydratase	NA	NA	NA	NA	NA
AXM34410.1|2739568_2740099_+	3-hydroxyanthranilate 3,4-dioxygenase	NA	NA	NA	NA	NA
AXM32621.1|2740111_2740759_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32622.1|2742299_2743571_+	kynureninase	NA	NA	NA	NA	NA
AXM32623.1|2743742_2745110_+	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
AXM32624.1|2745413_2746859_+	exodeoxyribonuclease I	NA	NA	NA	NA	NA
AXM32625.1|2746855_2747542_+	DUF2461 domain-containing protein	NA	NA	NA	NA	NA
AXM32626.1|2747514_2748534_+	aldo/keto reductase	NA	NA	NA	NA	NA
AXM32627.1|2748575_2749136_+	DUF2939 domain-containing protein	NA	NA	NA	NA	NA
AXM32628.1|2749156_2750113_-	5'-nucleotidase	NA	NA	NA	NA	NA
AXM34411.1|2750280_2751057_-	NAD(+) kinase	NA	NA	NA	NA	NA
AXM32629.1|2751540_2753676_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
AXM32630.1|2753672_2753864_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32631.1|2755637_2756144_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXM32632.1|2756184_2756712_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXM32633.1|2756708_2757200_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AXM32634.1|2757223_2757799_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
AXM32635.1|2757875_2758829_-	DUF1684 domain-containing protein	NA	NA	NA	NA	NA
AXM32636.1|2758917_2759790_-	sulfurtransferase	NA	NA	NA	NA	NA
AXM34412.1|2759786_2760554_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
AXM32637.1|2760738_2761437_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
AXM32638.1|2761600_2762383_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXM32639.1|2762391_2762772_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32640.1|2762768_2763479_+	endonuclease III	NA	NA	NA	NA	NA
AXM32641.1|2764790_2765339_-	carbonic anhydrase	NA	NA	NA	NA	NA
AXM32642.1|2765465_2766229_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32643.1|2767062_2768313_+	porin	NA	NA	NA	NA	NA
AXM34413.1|2768447_2769521_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4SNR3	Cyanophage	38.4	5.0e-48
AXM32644.1|2769706_2770798_+	phosphate ABC transporter substrate-binding protein PstS	NA	E3SKK5	Synechococcus_phage	39.7	1.1e-47
AXM32645.1|2770910_2771885_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AXM32646.1|2771884_2772754_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
AXM32647.1|2772776_2773607_+	phosphate ABC transporter ATP-binding protein PstB	NA	W8CYL7	Bacillus_phage	32.6	5.5e-18
AXM32648.1|2773735_2774446_+	phosphate transport system regulatory protein PhoU	NA	NA	NA	NA	NA
AXM32649.1|2774578_2774974_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32650.1|2775251_2775893_+	ribonuclease T	NA	NA	NA	NA	NA
AXM32651.1|2775963_2777283_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32652.1|2777519_2778581_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34414.1|2778631_2779816_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.4	1.0e-41
AXM32653.1|2780065_2781454_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32654.1|2784071_2784434_+	recombinase	NA	NA	NA	NA	NA
AXM32655.1|2784514_2785483_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	30.3	1.4e-28
AXM32656.1|2785577_2787422_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AXM32657.1|2787618_2787972_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
AXM32658.1|2788103_2789249_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	46.2	2.2e-86
AXM34415.1|2789318_2790389_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AXM32659.1|2790554_2790986_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AXM32660.1|2791109_2792606_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AXM32661.1|2792565_2792880_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32662.1|2792950_2793658_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32663.1|2795825_2796794_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
AXM32664.1|2797397_2798774_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
AXM32665.1|2798933_2799890_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM32666.1|2800503_2802846_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32667.1|2802870_2803599_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32668.1|2803627_2806462_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32669.1|2806458_2807388_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXM32670.1|2807396_2810159_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.6	3.3e-43
AXM32671.1|2811724_2814316_-	avirulence protein	NA	NA	NA	NA	NA
AXM32672.1|2814355_2814745_-	type VI secretion protein	NA	NA	NA	NA	NA
AXM32673.1|2814899_2815859_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32674.1|2815791_2816106_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
AXM32675.1|2817620_2818577_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.7	1.4e-41
AXM32676.1|2820025_2821147_-	phytase	NA	NA	NA	NA	NA
AXM34416.1|2823413_2823839_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM34417.1|2824031_2824664_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AXM32677.1|2825060_2825823_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32678.1|2826103_2827135_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM32679.1|2827141_2828935_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AXM32680.1|2828931_2829216_-	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	57.0	1.4e-18
AXM34418.1|2829206_2829389_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34419.1|2829447_2829933_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32681.1|2829991_2830498_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	41.1	4.8e-25
AXM32682.1|2830494_2831115_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
AXM32683.1|2831355_2833260_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.8	1.0e-112
AXM32684.1|2834504_2835824_+|transposase	IS701-like element ISXo15 family transposase	transposase	NA	NA	NA	NA
AXM32685.1|2836112_2839427_+	avirulence protein	NA	NA	NA	NA	NA
AXM32686.1|2842619_2846222_+	Avirulence protein AvrBs3	NA	NA	NA	NA	NA
AXM32687.1|2846490_2846685_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	80.6	2.5e-19
AXM32688.1|2846688_2846988_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	90.2	2.5e-45
AXM32689.1|2847211_2850517_+	avirulence protein	NA	NA	NA	NA	NA
AXM34420.1|2850590_2850686_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32690.1|2851886_2852900_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXM32691.1|2852999_2853584_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
AXM32692.1|2853647_2854616_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.9e-99
AXM32693.1|2855169_2856519_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.6	4.5e-94
AXM32694.1|2856525_2857290_+	energy transducer TonB	NA	NA	NA	NA	NA
AXM34421.1|2857650_2858118_+	energy transducer TonB	NA	NA	NA	NA	NA
AXM34422.1|2858304_2859406_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.2	1.6e-36
AXM32695.1|2863192_2864407_-|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.7	6.2e-55
AXM32696.1|2864753_2865953_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AXM32697.1|2866101_2866284_+	cold shock domain-containing protein	NA	NA	NA	NA	NA
AXM32698.1|2868297_2869254_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM32699.1|2871449_2872415_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM32700.1|2872415_2873169_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32701.1|2873999_2874968_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.5e-99
AXM32702.1|2875152_2876388_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	2952537	3019501	5015823	transposase,protease,coat	Bacillus_virus(22.22%)	52	NA	NA
AXM32757.1|2952537_2953503_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM32758.1|2954948_2955197_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32759.1|2955391_2956154_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32760.1|2956151_2956886_-	class A beta-lactamase-related serine hydrolase	NA	NA	NA	NA	NA
AXM32761.1|2956936_2958517_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
AXM32762.1|2958523_2959717_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXM32763.1|2959727_2961245_-	multidrug RND transporter	NA	NA	NA	NA	NA
AXM32764.1|2961241_2961682_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXM32765.1|2961803_2962655_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXM32766.1|2962715_2964959_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	34.7	1.1e-81
AXM32767.1|2965414_2965951_-	bacterioferritin	NA	NA	NA	NA	NA
AXM34431.1|2966046_2968464_+	penicillin acylase family protein	NA	NA	NA	NA	NA
AXM32768.1|2969396_2969750_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32769.1|2969843_2971970_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXM32770.1|2971972_2972185_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32771.1|2972346_2973453_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA	NA
AXM32772.1|2973521_2975216_-	asparagine synthase B	NA	E5ERH5	Ostreococcus_lucimarinus_virus	38.6	2.5e-86
AXM32773.1|2975510_2976641_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AXM32774.1|2976645_2977146_-	GNAT family N-acetyltransferase	NA	A0A1X9I687	Streptococcus_phage	41.7	2.3e-27
AXM32775.1|2977142_2977499_-	arsenate reductase	NA	NA	NA	NA	NA
AXM32776.1|2977961_2979158_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AXM32777.1|2979174_2981784_-	bifunctional uridylyltransferase/uridylyl-removing protein	NA	NA	NA	NA	NA
AXM32778.1|2981780_2982557_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
AXM34432.1|2982876_2983401_+	SCPU domain-containing protein	NA	NA	NA	NA	NA
AXM32779.1|2983409_2984180_+	molecular chaperone	NA	NA	NA	NA	NA
AXM32780.1|2984196_2986548_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
AXM32781.1|2986544_2987579_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
AXM32782.1|2987625_2987958_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32783.1|2987960_2988686_+	molecular chaperone	NA	NA	NA	NA	NA
AXM32784.1|2989061_2989865_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
AXM32785.1|2990034_2990913_+	elongation factor Ts	NA	NA	NA	NA	NA
AXM32786.1|2991040_2991418_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
AXM32787.1|2991474_2992197_+	UMP kinase	NA	NA	NA	NA	NA
AXM32788.1|2992377_2992935_+	ribosome recycling factor	NA	NA	NA	NA	NA
AXM32789.1|2992952_2993714_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	32.6	3.6e-16
AXM32790.1|2993710_2994538_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AXM32791.1|2994540_2995731_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AXM32792.1|2995757_2997104_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
AXM32793.1|2997100_2999554_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AXM32794.1|2999922_3000936_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AXM32795.1|3000932_3001394_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AXM32796.1|3001417_3002209_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AXM34433.1|3002247_3003504_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AXM32797.1|3003500_3004241_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	38.0	1.6e-24
AXM32798.1|3004698_3008289_+	DNA polymerase III subunit alpha	NA	A0A291AVA6	Streptomyces_phage	36.6	4.4e-181
AXM32799.1|3008464_3009424_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
AXM32800.1|3010263_3012444_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM32801.1|3012443_3013181_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.6	3.5e-08
AXM32802.1|3013177_3014590_+	DUF3526 domain-containing protein	NA	NA	NA	NA	NA
AXM32803.1|3014526_3015870_+	DUF3526 domain-containing protein	NA	NA	NA	NA	NA
AXM32804.1|3016605_3017982_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
AXM32805.1|3018124_3019501_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
>prophage 25
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3028816	3080344	5015823	transposase,tRNA	Acidithiobacillus_phage(28.57%)	46	NA	NA
AXM32809.1|3028816_3030292_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	67.8	3.7e-102
AXM32810.1|3030334_3030730_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA	NA
AXM32811.1|3030769_3032146_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	6.6e-77
AXM34437.1|3033781_3034456_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	24.5	1.9e-08
AXM32812.1|3034460_3035237_+	VUT family protein	NA	R4TNY5	Halovirus	27.2	1.9e-09
AXM32813.1|3036509_3038447_+	DUF885 family protein	NA	NA	NA	NA	NA
AXM32814.1|3038628_3039606_-	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
AXM32815.1|3039602_3041000_-	S-methylmethionine permease	NA	NA	NA	NA	NA
AXM32816.1|3041271_3042330_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM32817.1|3043093_3043543_+	DUF2147 domain-containing protein	NA	NA	NA	NA	NA
AXM32818.1|3043767_3045852_+|tRNA	methionine--tRNA ligase	tRNA	NA	NA	NA	NA
AXM32819.1|3046094_3046691_+	HAD family hydrolase	NA	NA	NA	NA	NA
AXM32820.1|3046692_3047121_+	Rnf electron transport complex subunit RnfB	NA	NA	NA	NA	NA
AXM32821.1|3047333_3047516_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32822.1|3047739_3048522_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32823.1|3048607_3048976_+	DUF4345 domain-containing protein	NA	NA	NA	NA	NA
AXM32824.1|3049034_3049598_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AXM32825.1|3049582_3050428_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34438.1|3050653_3051652_+	acyl-CoA desaturase	NA	G4YAW5	Emiliania_huxleyi_virus	30.6	2.3e-18
AXM32826.1|3051648_3052899_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXM32827.1|3052823_3053783_+	DUF1365 domain-containing protein	NA	NA	NA	NA	NA
AXM32828.1|3053779_3055075_+	class I SAM-dependent methyltransferase	NA	A0A2I2L5L3	Orpheovirus	32.4	3.9e-39
AXM32829.1|3055071_3055617_+	DUF2878 domain-containing protein	NA	NA	NA	NA	NA
AXM32830.1|3055613_3056396_+	DUF1295 domain-containing protein	NA	NA	NA	NA	NA
AXM32831.1|3056413_3057484_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXM32832.1|3057646_3057994_-	RidA family protein	NA	NA	NA	NA	NA
AXM32833.1|3058974_3061539_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
AXM32834.1|3062162_3063533_-	virulence factor family protein	NA	NA	NA	NA	NA
AXM32835.1|3063602_3063797_-	oxidoreductase-like protein	NA	NA	NA	NA	NA
AXM32836.1|3063856_3064465_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32837.1|3064500_3065103_-	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA	NA
AXM32838.1|3065376_3065832_-	PA2169 family four-helix-bundle protein	NA	NA	NA	NA	NA
AXM32839.1|3066047_3066224_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32840.1|3066272_3066380_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXM32841.1|3066394_3067606_-	MFS transporter	NA	NA	NA	NA	NA
AXM32842.1|3067826_3068945_+	alkene reductase	NA	NA	NA	NA	NA
AXM32843.1|3069015_3069393_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34439.1|3069835_3070126_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32844.1|3070414_3070750_-	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
AXM32845.1|3070864_3071914_+	cation transporter	NA	NA	NA	NA	NA
AXM32846.1|3073585_3074059_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AXM32847.1|3074198_3075575_+	heat-shock protein Hsp70	NA	NA	NA	NA	NA
AXM32848.1|3075764_3075950_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32849.1|3076928_3077727_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32850.1|3077843_3079163_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32851.1|3079375_3080344_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.9e-99
>prophage 26
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3106553	3143645	5015823	transposase,protease	Tupanvirus(33.33%)	28	NA	NA
AXM32874.1|3106553_3107873_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM32875.1|3107973_3108930_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM32876.1|3109024_3110401_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.2	1.9e-79
AXM32877.1|3110629_3111865_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM32878.1|3111960_3112458_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
AXM32879.1|3112632_3113967_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	F5CA72	Streptococcus_phi-m46.1-like_phage	26.8	1.7e-29
AXM32880.1|3114125_3114848_+	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
AXM32881.1|3114996_3115719_-	DNA repair protein RecO	NA	NA	NA	NA	NA
AXM32882.1|3115942_3116842_-	GTPase Era	NA	NA	NA	NA	NA
AXM32883.1|3116838_3117519_-	ribonuclease III	NA	A0A2K9L5P0	Tupanvirus	29.4	9.9e-18
AXM32884.1|3117508_3117886_-	DUF4845 domain-containing protein	NA	NA	NA	NA	NA
AXM32885.1|3117916_3118717_-	signal peptidase I	NA	NA	NA	NA	NA
AXM32886.1|3118823_3120629_-	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	40.5	6.1e-22
AXM32887.1|3120794_3122381_-|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	30.0	6.5e-28
AXM32888.1|3122490_3123390_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32889.1|3123386_3124007_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
AXM32890.1|3124243_3126325_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXM34443.1|3126541_3127507_-	cation transporter	NA	NA	NA	NA	NA
AXM34444.1|3127745_3128648_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AXM32891.1|3128807_3129980_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXM32892.1|3129979_3130777_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXM32893.1|3130773_3131955_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXM32894.1|3131965_3133471_-	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA	NA
AXM32895.1|3133609_3134995_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXM32896.1|3138854_3139208_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32897.1|3139374_3141306_-	alpha-L-fucosidase	NA	NA	NA	NA	NA
AXM32898.1|3142638_3142812_+	MFS transporter	NA	NA	NA	NA	NA
AXM32899.1|3142882_3143645_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3215903	3375920	5015823	transposase,tRNA	Staphylococcus_prophage(19.23%)	104	NA	NA
AXM32942.1|3215903_3216860_-|transposase	IS30 family transposase IS1112a	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
AXM34448.1|3217011_3217395_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32943.1|3218300_3219545_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXM32944.1|3219541_3219820_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32945.1|3219897_3220299_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32946.1|3220352_3220580_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32947.1|3220581_3220953_-	biotin/lipoyl-binding protein	NA	NA	NA	NA	NA
AXM32948.1|3220949_3221216_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32949.1|3221517_3222474_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM32950.1|3222840_3224304_+	glycoside hydrolase family 125 protein	NA	NA	NA	NA	NA
AXM32951.1|3224439_3226782_+	alpha-mannosidase	NA	NA	NA	NA	NA
AXM32952.1|3227061_3228903_+	beta-galactosidase	NA	NA	NA	NA	NA
AXM34449.1|3228952_3231484_-	type III secretion system effector protein XopK	NA	NA	NA	NA	NA
AXM32953.1|3231565_3231901_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32954.1|3232101_3232302_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32955.1|3232359_3232680_-	R body protein RebB-like protein	NA	NA	NA	NA	NA
AXM32956.1|3233059_3234163_+	exo-alpha-sialidase	NA	NA	NA	NA	NA
AXM34450.1|3234305_3236264_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32957.1|3236373_3237105_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
AXM32958.1|3237101_3238166_-	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase	NA	NA	NA	NA	NA
AXM32959.1|3242814_3244134_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM34451.1|3244266_3245349_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM32960.1|3245360_3245984_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXM32961.1|3246234_3246711_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
AXM32962.1|3246744_3247947_-	chemotaxis protein	NA	NA	NA	NA	NA
AXM32963.1|3247954_3254881_-	response regulator	NA	W8CYM9	Bacillus_phage	31.1	2.9e-11
AXM32964.1|3254994_3257031_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	42.1	2.1e-23
AXM32965.1|3257070_3257601_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
AXM32966.1|3257600_3257963_-	response regulator	NA	A0A220YL79	Alteromonas_virus	26.8	9.0e-10
AXM32967.1|3257980_3258382_-	response regulator	NA	NA	NA	NA	NA
AXM32968.1|3258631_3259582_+	glutathione synthase	NA	NA	NA	NA	NA
AXM32969.1|3259578_3260454_+	energy transducer TonB	NA	NA	NA	NA	NA
AXM34452.1|3260748_3261699_-	ADP-ribosylglycohydrolase family protein	NA	A0A1S6UB21	Serratia_phage	48.8	1.4e-65
AXM32970.1|3261661_3262381_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
AXM32971.1|3262394_3264422_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	33.2	2.7e-95
AXM32972.1|3264623_3265148_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32973.1|3265160_3267605_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
AXM32974.1|3267846_3269949_+	glycosyltransferase	NA	NA	NA	NA	NA
AXM34453.1|3270281_3271724_-	hypothetical protein	NA	NA	NA	NA	NA
AXM32975.1|3272013_3274200_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA	NA
AXM32976.1|3274489_3274570_+	pyrroloquinoline quinone precursor peptide PqqA	NA	NA	NA	NA	NA
AXM32977.1|3274653_3275553_+	pyrroloquinoline quinone biosynthesis protein PqqB	NA	NA	NA	NA	NA
AXM32978.1|3275549_3276302_+	pyrroloquinoline-quinone synthase	NA	NA	NA	NA	NA
AXM32979.1|3276298_3276577_+	pyrroloquinoline quinone biosynthesis peptide chaperone PqqD	NA	NA	NA	NA	NA
AXM32980.1|3276573_3277692_+	pyrroloquinoline quinone biosynthesis protein PqqE	NA	NA	NA	NA	NA
AXM32981.1|3277754_3278267_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32982.1|3278695_3280210_+	PhoPQ-regulated protein	NA	NA	NA	NA	NA
AXM32983.1|3281651_3284306_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM32984.1|3284526_3288648_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SDF7	Indivirus	28.5	5.6e-47
AXM32985.1|3288749_3289295_+	DNA starvation/stationary phase protection protein	NA	A0A2H4N7L5	Lake_Baikal_phage	32.4	1.5e-16
AXM32986.1|3289851_3291648_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.5	1.5e-81
AXM32987.1|3291786_3292284_+	hypothetical protein	NA	NA	NA	NA	NA
AXM32988.1|3292362_3292767_+	response regulator	NA	NA	NA	NA	NA
AXM32989.1|3293397_3294072_-	7-cyano-7-deazaguanine synthase	NA	A0A088F6S9	Vibrio_phage	34.7	6.4e-25
AXM32990.1|3294450_3295827_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	1.4e-58
AXM32991.1|3295893_3296656_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM32992.1|3296707_3297943_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM32993.1|3298062_3298746_-	7-carboxy-7-deazaguanine synthase QueE	NA	J9PV61	Bacillus_phage	39.5	1.5e-37
AXM32994.1|3298788_3299607_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AXM32995.1|3299613_3300132_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AXM32996.1|3300189_3301509_-	protein TolB	NA	NA	NA	NA	NA
AXM32997.1|3301768_3302809_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AXM32998.1|3302798_3303248_-	protein TolR	NA	NA	NA	NA	NA
AXM32999.1|3303404_3304184_-	protein TolQ	NA	NA	NA	NA	NA
AXM33000.1|3304195_3304654_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AXM33001.1|3304706_3305744_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	28.2	2.7e-06
AXM33002.1|3305872_3307780_-	potassium transporter Kup	NA	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	34.1	3.4e-79
AXM33003.1|3307979_3308564_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AXM33004.1|3308721_3309246_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AXM33005.1|3309360_3310089_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXM33006.1|3310178_3310856_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXM33007.1|3310955_3311483_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXM33008.1|3311994_3313761_-|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
AXM33009.1|3313918_3314695_+	DUF3011 domain-containing protein	NA	NA	NA	NA	NA
AXM33010.1|3315192_3315486_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AXM33011.1|3315926_3317165_+	MFS transporter	NA	NA	NA	NA	NA
AXM33012.1|3319748_3321305_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33013.1|3322690_3324085_+	DNA repair protein RadA	NA	NA	NA	NA	NA
AXM33014.1|3325455_3326412_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33015.1|3328113_3330669_+	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.8	1.3e-30
AXM33016.1|3332548_3333347_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34454.1|3334390_3336214_-	RHS repeat protein	NA	NA	NA	NA	NA
AXM33017.1|3336484_3337441_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33018.1|3337516_3338485_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.1e-99
AXM34455.1|3338399_3339098_+	hypothetical protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	46.8	8.6e-25
AXM33019.1|3339149_3340118_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM33020.1|3340246_3340609_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33021.1|3340675_3341995_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33022.1|3342194_3343163_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM33023.1|3343299_3344619_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33024.1|3347238_3348195_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33025.1|3353391_3353673_-|transposase	transposase	transposase	NA	NA	NA	NA
AXM33026.1|3355243_3355819_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33027.1|3355822_3360517_-	type IV secretion protein Rhs	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	48.6	1.5e-24
AXM33028.1|3360660_3362280_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33029.1|3362303_3364550_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	31.3	4.4e-54
AXM34456.1|3364774_3366472_-	M61 family peptidase	NA	NA	NA	NA	NA
AXM33030.1|3366821_3367157_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AXM33031.1|3367156_3367783_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AXM33032.1|3367785_3369786_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AXM33033.1|3369785_3370721_-	ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AXM33034.1|3371234_3372185_-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA	NA
AXM33035.1|3372273_3372774_-	lipoprotein signal peptidase	NA	NA	NA	NA	NA
AXM33036.1|3373088_3375920_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SGW1	Hokovirus	22.2	4.1e-41
>prophage 28
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3426552	3439000	5015823	transposase	uncultured_marine_virus(33.33%)	9	NA	NA
AXM33078.1|3426552_3427872_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33079.1|3428432_3428603_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33080.1|3428723_3429938_-|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.7	8.2e-55
AXM33081.1|3429936_3430209_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33082.1|3430109_3431078_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXM33083.1|3431617_3434380_-	type IV secretion protein Rhs	NA	NA	NA	NA	NA
AXM33084.1|3434403_3435360_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33085.1|3436875_3438195_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33086.1|3438237_3439000_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 29
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3479836	3520133	5015823	transposase,tRNA	Staphylococcus_prophage(18.18%)	35	NA	NA
AXM33112.1|3479836_3480808_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.5	1.2e-32
AXM33113.1|3480859_3481270_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AXM33114.1|3481368_3482094_-	OmpA family protein	NA	G3M9Z0	Bacillus_virus	33.9	1.4e-09
AXM34462.1|3482103_3482283_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33115.1|3482510_3483965_-	deoxyribodipyrimidine photo-lyase	NA	A0A1V0S949	Catovirus	31.7	5.7e-47
AXM33116.1|3484031_3485462_-	replicative DNA helicase	NA	O80281	Escherichia_phage	53.4	8.5e-120
AXM33117.1|3485683_3486238_-	NADPH-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	35.3	1.1e-19
AXM33118.1|3486454_3488395_-	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1B1ISV2	uncultured_Mediterranean_phage	30.5	4.4e-26
AXM33119.1|3488570_3489209_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AXM34463.1|3491442_3492606_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXM33120.1|3492763_3493555_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AXM33121.1|3493700_3493916_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33122.1|3493915_3494683_+	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AXM33123.1|3494744_3495575_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AXM33124.1|3495647_3496076_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33125.1|3496207_3496687_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AXM33126.1|3496937_3497153_-	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	59.7	6.5e-16
AXM33127.1|3497380_3497866_+	DUF456 domain-containing protein	NA	NA	NA	NA	NA
AXM33128.1|3499427_3499631_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33129.1|3500408_3500867_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AXM33130.1|3501272_3501779_-	transcriptional repressor	NA	NA	NA	NA	NA
AXM33131.1|3501792_3503196_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
AXM34464.1|3504381_3505113_-	nitrilase	NA	NA	NA	NA	NA
AXM33132.1|3505186_3506143_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.6	6.2e-42
AXM33133.1|3506616_3507429_+	peptidase C1	NA	NA	NA	NA	NA
AXM33134.1|3507491_3508460_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM33135.1|3508659_3509979_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33136.1|3511461_3511845_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33137.1|3512360_3513173_+	peptidase C1	NA	NA	NA	NA	NA
AXM33138.1|3513233_3514292_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	7.6e-73
AXM33139.1|3514286_3515456_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.8	8.3e-97
AXM33140.1|3515632_3516016_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33141.1|3516750_3517563_+	peptidase C1	NA	NA	NA	NA	NA
AXM33142.1|3517633_3518953_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33143.1|3519074_3520133_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 30
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3556618	3632163	5015823	transposase	uncultured_Caudovirales_phage(22.22%)	60	NA	NA
AXM33166.1|3556618_3557587_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM34471.1|3558416_3558965_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXM33167.1|3559958_3560906_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXM33168.1|3560902_3563326_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	29.0	2.4e-37
AXM34472.1|3563335_3564748_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
AXM33169.1|3564737_3565424_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXM33170.1|3565384_3566245_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXM34473.1|3566299_3568702_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	29.2	3.5e-41
AXM33171.1|3569737_3570595_-	pirin family protein	NA	NA	NA	NA	NA
AXM33172.1|3570826_3572899_+	carbon starvation protein A	NA	NA	NA	NA	NA
AXM33173.1|3572898_3573123_+	putative selenoprotein	NA	NA	NA	NA	NA
AXM33174.1|3573153_3573342_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33175.1|3573660_3574338_-	HAD family hydrolase	NA	NA	NA	NA	NA
AXM33176.1|3574716_3575682_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM33177.1|3578191_3579676_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.9	1.1e-13
AXM33178.1|3579958_3580495_-	single-stranded DNA-binding protein	NA	A0A1B1W281	Salmonella_phage	58.5	3.6e-31
AXM33179.1|3580770_3581769_+	octaprenyl-diphosphate synthase	NA	NA	NA	NA	NA
AXM33180.1|3581953_3582748_-	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AXM33181.1|3582844_3583018_-	AsmA family protein	NA	NA	NA	NA	NA
AXM33182.1|3583064_3584471_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
AXM33183.1|3584451_3585807_-	endonuclease domain-containing protein	NA	NA	NA	NA	NA
AXM33184.1|3585803_3586262_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33185.1|3586245_3588855_-	bifunctional aspartate kinase/diaminopimelate decarboxylase	NA	NA	NA	NA	NA
AXM33186.1|3589954_3590836_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AXM33187.1|3591934_3592534_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AXM33188.1|3592686_3593121_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AXM33189.1|3593623_3594571_-	aspartate carbamoyltransferase catalytic subunit	NA	NA	NA	NA	NA
AXM33190.1|3594584_3595052_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
AXM33191.1|3595044_3595611_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
AXM33192.1|3596875_3597448_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AXM33193.1|3597515_3598472_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33194.1|3599090_3600221_-	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA	NA
AXM33195.1|3600334_3601372_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA	NA
AXM33196.1|3601735_3602428_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AXM33197.1|3602471_3603332_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AXM33198.1|3605366_3605792_+	DNA-binding protein	NA	NA	NA	NA	NA
AXM33199.1|3605897_3606539_+	M23 family peptidase	NA	NA	NA	NA	NA
AXM33200.1|3606596_3606938_+	DUF3861 family protein	NA	NA	NA	NA	NA
AXM33201.1|3606995_3607538_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33202.1|3607593_3608190_+	DUF1439 domain-containing protein	NA	NA	NA	NA	NA
AXM33203.1|3608307_3608688_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33204.1|3608794_3609013_-	peptidase	NA	NA	NA	NA	NA
AXM33205.1|3609117_3609585_-	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA	NA
AXM33206.1|3609756_3610215_+	SUF system Fe-S cluster assembly regulator	NA	NA	NA	NA	NA
AXM33207.1|3610230_3611688_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
AXM33208.1|3611945_3612710_+	Fe-S cluster assembly ATPase SufC	NA	W5SAS9	Pithovirus	28.9	1.6e-11
AXM33209.1|3612709_3613972_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
AXM33210.1|3613968_3615213_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	41.9	2.3e-92
AXM33211.1|3615456_3615996_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXM33212.1|3615992_3616322_+	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA	NA
AXM33213.1|3618257_3619223_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM33214.1|3620487_3621642_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA	NA
AXM33215.1|3621641_3622964_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA	NA
AXM34474.1|3622990_3624031_+	dihydrorhizobitoxine desaturase	NA	NA	NA	NA	NA
AXM34475.1|3624048_3624909_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
AXM33216.1|3624943_3625543_+	LysE family translocator	NA	NA	NA	NA	NA
AXM33217.1|3625609_3626545_+	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
AXM34476.1|3626610_3627963_+	glutamine synthetase	NA	NA	NA	NA	NA
AXM34477.1|3628054_3629239_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	6.5e-41
AXM33218.1|3630927_3632163_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
>prophage 31
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3641813	3717640	5015823	transposase,tRNA	Acinetobacter_phage(33.33%)	51	NA	NA
AXM33223.1|3641813_3643289_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	66.4	2.9e-99
AXM33224.1|3643371_3644190_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXM33225.1|3645300_3646146_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	31.7	8.6e-11
AXM33226.1|3646169_3646595_-	YcxB family protein	NA	NA	NA	NA	NA
AXM33227.1|3646867_3648784_-	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	30.7	8.6e-67
AXM34478.1|3649914_3650871_-|transposase	IS30-like element IS1112a family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.2	4.8e-42
AXM33228.1|3652872_3653313_+	VOC family protein	NA	NA	NA	NA	NA
AXM33229.1|3653586_3655974_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	32.9	9.2e-10
AXM33230.1|3656306_3658706_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	33.3	4.9e-11
AXM33231.1|3659804_3661514_+	Kef family K(+) transporter	NA	NA	NA	NA	NA
AXM33232.1|3662923_3663685_+	4-hydroxy-2-oxovalerate aldolase	NA	NA	NA	NA	NA
AXM33233.1|3663685_3665827_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXM33234.1|3666062_3667289_+	siderophore biosynthesis protein PvsA	NA	NA	NA	NA	NA
AXM34479.1|3667285_3669088_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AXM33235.1|3669084_3670281_+	MFS transporter	NA	NA	NA	NA	NA
AXM33236.1|3670258_3672028_+	iron transporter	NA	NA	NA	NA	NA
AXM33237.1|3672024_3673221_+	type III PLP-dependent enzyme	NA	NA	NA	NA	NA
AXM34480.1|3673395_3674130_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA	NA
AXM33238.1|3674126_3674717_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
AXM33239.1|3674713_3675760_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA	NA
AXM33240.1|3675756_3676278_-	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA	NA
AXM33241.1|3676791_3677403_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
AXM34481.1|3677399_3677999_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33242.1|3677998_3678592_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33243.1|3680364_3682242_-	TonB-dependent vitamin B12 receptor	NA	A0A0P0I887	Acinetobacter_phage	29.5	4.9e-06
AXM33244.1|3685299_3685449_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33245.1|3685479_3686391_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33246.1|3686515_3689101_-	ATP-dependent chaperone ClpB	NA	A0A1C3S747	Escherichia_phage	35.4	3.8e-126
AXM33247.1|3689546_3689852_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
AXM33248.1|3689881_3690157_+	glutathione transferase	NA	NA	NA	NA	NA
AXM33249.1|3690842_3691640_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33250.1|3692334_3693549_-|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
AXM34482.1|3693968_3694376_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
AXM34483.1|3694716_3696207_+	MATE family efflux transporter	NA	NA	NA	NA	NA
AXM33251.1|3696832_3697240_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
AXM33252.1|3697363_3698143_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AXM33253.1|3698243_3698756_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AXM33254.1|3698799_3699057_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
AXM33255.1|3699166_3699964_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33256.1|3699954_3701025_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AXM34484.1|3702597_3703974_-	signal recognition particle protein	NA	NA	NA	NA	NA
AXM33257.1|3705323_3705503_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33258.1|3705533_3706325_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
AXM33259.1|3706612_3707662_-	galactose mutarotase	NA	NA	NA	NA	NA
AXM33260.1|3707909_3709493_+	alpha-N-arabinofuranosidase	NA	NA	NA	NA	NA
AXM33261.1|3709479_3709668_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33262.1|3709990_3710956_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM33263.1|3711646_3712534_-	HutD family protein	NA	NA	NA	NA	NA
AXM33264.1|3714236_3714569_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
AXM33265.1|3714768_3716262_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
AXM33266.1|3716581_3717640_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 32
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3746797	3826008	5015823	transposase,protease	Xanthomonas_phage(57.14%)	54	NA	NA
AXM33297.1|3746797_3748033_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM33298.1|3748454_3749843_-	amino acid permease	NA	NA	NA	NA	NA
AXM33299.1|3750598_3751540_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AXM33300.1|3751853_3752618_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AXM33301.1|3752810_3754193_+	amino acid permease	NA	NA	NA	NA	NA
AXM33302.1|3754632_3756030_+|protease	serine protease	protease	NA	NA	NA	NA
AXM33303.1|3756276_3756462_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33304.1|3756592_3756991_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33305.1|3757135_3758140_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AXM33306.1|3758177_3759695_-	tryptophan 7-halogenase	NA	A0A1D7SEI2	Cyanophage	32.3	8.1e-52
AXM33307.1|3759735_3760782_-	cupin-like domain-containing protein	NA	NA	NA	NA	NA
AXM34490.1|3760792_3761545_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AXM33308.1|3761620_3761857_+	transcriptional regulator	NA	NA	NA	NA	NA
AXM33309.1|3761876_3765023_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM33310.1|3766081_3768088_-	M1 family peptidase	NA	NA	NA	NA	NA
AXM33311.1|3768307_3768754_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AXM33312.1|3770781_3771948_-	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	42.1	5.8e-74
AXM33313.1|3771949_3772522_-	DUF1190 domain-containing protein	NA	A0A191ZBZ0	Erwinia_phage	27.7	1.1e-09
AXM33314.1|3772534_3772939_-	DUF350 domain-containing protein	NA	NA	NA	NA	NA
AXM33315.1|3772976_3773648_-	DUF2491 family protein	NA	NA	NA	NA	NA
AXM33316.1|3773650_3774733_-	potassium channel protein	NA	NA	NA	NA	NA
AXM33317.1|3774758_3775532_-	PspA/IM30 family protein	NA	NA	NA	NA	NA
AXM33318.1|3775544_3775961_-	DUF2170 family protein	NA	NA	NA	NA	NA
AXM33319.1|3776141_3776741_-	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AXM33320.1|3776907_3777450_+	shikimate kinase	NA	NA	NA	NA	NA
AXM34491.1|3777446_3778559_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AXM33321.1|3778860_3779112_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33322.1|3779126_3780191_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AXM33323.1|3781662_3785379_+	avirulence protein	NA	NA	NA	NA	NA
AXM33324.1|3785647_3785842_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	80.6	2.5e-19
AXM33325.1|3785845_3786145_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	92.4	6.4e-46
AXM33326.1|3786368_3790817_+	avirulence protein	NA	NA	NA	NA	NA
AXM33327.1|3791085_3791280_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	82.3	3.9e-20
AXM33328.1|3791283_3791583_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	92.4	1.4e-45
AXM33329.1|3791722_3795217_+	Avirulence protein AvrBs3	NA	NA	NA	NA	NA
AXM33330.1|3795485_3795680_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	92.2	2.5e-19
AXM33331.1|3795683_3795983_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	93.5	9.9e-47
AXM33332.1|3796206_3799215_+	avirulence protein	NA	NA	NA	NA	NA
AXM33333.1|3799483_3799678_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	92.2	2.5e-19
AXM33334.1|3799681_3799981_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	93.5	9.9e-47
AXM33335.1|3800204_3804332_+	avirulence protein	NA	NA	NA	NA	NA
AXM33336.1|3804505_3804727_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AXM33337.1|3804723_3805395_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	36.8	3.1e-24
AXM33338.1|3805416_3806286_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.0	1.2e-28
AXM33339.1|3806782_3808237_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33340.1|3810247_3811537_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
AXM33341.1|3814927_3815377_-	azurin	NA	NA	NA	NA	NA
AXM33342.1|3816819_3817323_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33343.1|3817347_3817773_-	cytochrome C biogenesis protein CcdA	NA	NA	NA	NA	NA
AXM33344.1|3817769_3819353_-	flavin monoamine oxidase family protein	NA	NA	NA	NA	NA
AXM33345.1|3820913_3821531_+	hydrolase	NA	NA	NA	NA	NA
AXM33346.1|3821777_3823004_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.1	4.0e-17
AXM33347.1|3823076_3823949_+	ion transporter	NA	NA	NA	NA	NA
AXM33348.1|3825209_3826008_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 33
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3829163	3900629	5015823	transposase	Ralstonia_phage(12.5%)	58	NA	NA
AXM33351.1|3829163_3830144_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.5	3.7e-98
AXM34492.1|3830577_3831465_+	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	32.7	1.2e-31
AXM33352.1|3831507_3832305_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34493.1|3832530_3832920_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33353.1|3832999_3833677_+	DNA-binding response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	27.4	7.4e-05
AXM33354.1|3834139_3835459_+	sensor histidine kinase	NA	NA	NA	NA	NA
AXM33355.1|3835568_3836534_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM33356.1|3836622_3837386_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34494.1|3837773_3838775_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AXM33357.1|3839130_3839427_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33358.1|3840649_3841885_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM34496.1|3843965_3844739_+	endonuclease	NA	NA	NA	NA	NA
AXM34495.1|3844752_3845583_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AXM33359.1|3845653_3846430_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXM33360.1|3846440_3847133_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AXM33361.1|3847132_3847747_+	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	2.1e-19
AXM33362.1|3848089_3848674_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33363.1|3848670_3849993_-	TonB family protein	NA	NA	NA	NA	NA
AXM33364.1|3849982_3850348_-	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA	NA
AXM34497.1|3850447_3851809_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXM33365.1|3851826_3852525_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	35.0	9.8e-29
AXM33366.1|3852547_3853210_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33367.1|3853190_3854030_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXM33368.1|3854029_3854704_-	iron-containing redox enzyme family protein	NA	NA	NA	NA	NA
AXM33369.1|3854700_3856200_-	long-chain acyl-CoA synthetase	NA	NA	NA	NA	NA
AXM34498.1|3856196_3856844_-	thermostable hemolysin	NA	NA	NA	NA	NA
AXM33370.1|3859350_3860526_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33371.1|3860655_3863370_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM33372.1|3863689_3864682_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
AXM33373.1|3864684_3865401_+	M23 family peptidase	NA	A0A0M5M794	Arthrobacter_phage	34.2	2.7e-05
AXM33374.1|3866219_3868220_-	transketolase	NA	NA	NA	NA	NA
AXM33375.1|3868446_3869727_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
AXM33376.1|3869924_3870242_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33377.1|3870537_3872295_-	protein BatD	NA	NA	NA	NA	NA
AXM33378.1|3872291_3874109_-	VWA domain-containing protein	NA	NA	NA	NA	NA
AXM33379.1|3874105_3875113_-	VWA domain-containing protein	NA	NA	NA	NA	NA
AXM33380.1|3875109_3875571_-	DUF4381 domain-containing protein	NA	NA	NA	NA	NA
AXM33381.1|3875573_3876536_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AXM33382.1|3876556_3877576_-	MoxR family ATPase	NA	NA	NA	NA	NA
AXM33383.1|3878198_3879233_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXM33384.1|3879303_3880539_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXM33385.1|3880681_3881479_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33386.1|3881550_3883500_-	type IV pilus secretin PilQ family protein	NA	NA	NA	NA	NA
AXM33387.1|3883519_3884053_-	fimbrial protein	NA	NA	NA	NA	NA
AXM33388.1|3884049_3884715_-	fimbrial protein	NA	NA	NA	NA	NA
AXM33389.1|3884711_3885470_-	fimbrial protein	NA	NA	NA	NA	NA
AXM33390.1|3885469_3886528_-	pilus assembly protein PilM	NA	NA	NA	NA	NA
AXM33391.1|3886650_3889173_+	penicillin-binding protein 1A	NA	NA	NA	NA	NA
AXM33392.1|3889240_3890197_-|transposase	IS30 family transposase IS1112b	transposase	Q9MBM9	Staphylococcus_prophage	35.8	3.7e-42
AXM33393.1|3890541_3891192_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34499.1|3891568_3892858_-	citrate synthase	NA	NA	NA	NA	NA
AXM33394.1|3893071_3893314_-	50S ribosomal protein L31 type B	NA	NA	NA	NA	NA
AXM33395.1|3893385_3894324_-	nucleoside hydrolase	NA	NA	NA	NA	NA
AXM33396.1|3894449_3896603_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
AXM33397.1|3896623_3897004_-	RidA family protein	NA	NA	NA	NA	NA
AXM33398.1|3897083_3899255_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.8	2.8e-13
AXM33399.1|3899383_3899683_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AXM33400.1|3899830_3900629_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 34
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	3959823	4109409	5015823	transposase,integrase,protease	Ralstonia_phage(17.86%)	114	3959261:3959320	4026306:4026370
3959261:3959320	attL	CCTAAGAACCTGTTCACGATCTCCTGAGCAGCAGTGCCAGGAACGCCAGGTGGATGAACT	NA	NA	NA	NA
AXM33444.1|3959823_3961059_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXM33445.1|3962047_3963649_+	rhamnogalacturonase B	NA	NA	NA	NA	NA
AXM34507.1|3964265_3965012_-	cellulase	NA	NA	NA	NA	NA
AXM33446.1|3965484_3966243_-	cellulase	NA	NA	NA	NA	NA
AXM33447.1|3966759_3967275_-	peptide deformylase	NA	NA	NA	NA	NA
AXM34508.1|3967596_3968019_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	61.9	5.2e-41
AXM33448.1|3968790_3970659_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
AXM33449.1|3970697_3971651_+	MoxR family ATPase	NA	NA	NA	NA	NA
AXM33450.1|3971656_3972613_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AXM33451.1|3972605_3974558_+	DUF3488 domain-containing protein	NA	NA	NA	NA	NA
AXM33452.1|3974554_3975088_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33453.1|3975207_3975558_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
AXM33454.1|3975659_3976253_-	recombination protein RecR	NA	NA	NA	NA	NA
AXM33455.1|3976350_3976671_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AXM33456.1|3976677_3978774_-	DNA polymerase III subunit gamma/tau	NA	E7DN81	Pneumococcus_phage	40.7	4.1e-46
AXM33457.1|3979335_3979782_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AXM33458.1|3979778_3980024_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AXM33459.1|3980020_3980518_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AXM33460.1|3980542_3980902_-	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AXM33461.1|3980919_3981951_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AXM33462.1|3981950_3982700_-	MBL fold metallo-hydrolase	NA	A0A0A0RUN7	Bacillus_phage	26.0	2.4e-09
AXM33463.1|3982699_3983449_-	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA	NA
AXM33464.1|3983469_3984519_+	lipopolysaccharide heptosyltransferase family protein	NA	NA	NA	NA	NA
AXM33465.1|3984729_3985134_-	hypothetical protein	NA	A0A1C9C5K8	Heterosigma_akashiwo_virus	35.9	5.0e-17
AXM34509.1|3985244_3985931_+|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	51.8	2.3e-54
AXM33466.1|3986029_3986995_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM33467.1|3987077_3987635_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33468.1|3987696_3987960_-	PAAR domain-containing protein	NA	A4JWV5	Burkholderia_virus	43.4	7.5e-06
AXM33469.1|3987956_3989651_-	DUF2875 domain-containing protein	NA	NA	NA	NA	NA
AXM33470.1|3989647_3991855_-	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	28.2	2.0e-19
AXM33471.1|3991916_3992180_-	PAAR domain-containing protein	NA	A4JWV5	Burkholderia_virus	43.4	7.5e-06
AXM33472.1|3992176_3993871_-	DUF2875 domain-containing protein	NA	NA	NA	NA	NA
AXM33473.1|3993867_3996072_-	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	29.7	5.9e-19
AXM33474.1|3996391_3998089_-	DUF2875 domain-containing protein	NA	NA	NA	NA	NA
AXM34510.1|3998085_4000236_-	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	28.2	2.6e-27
AXM33475.1|4000303_4003027_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	30.3	9.7e-72
AXM33476.1|4003422_4003623_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33477.1|4004515_4005145_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33478.1|4005402_4005618_+	hypothetical protein	NA	A0A1W6JTB0	Pseudomonas_phage	65.8	3.6e-06
AXM33479.1|4005971_4006676_+	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
AXM33480.1|4007111_4007846_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	40.4	8.7e-36
AXM33481.1|4007854_4008307_-	ribonuclease HI	NA	A0A1Q2U2R0	Vibrio_phage	55.4	2.8e-40
AXM33482.1|4008334_4008991_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33483.1|4009003_4009771_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AXM33484.1|4009767_4010946_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AXM33485.1|4011644_4013615_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AXM33486.1|4014446_4014719_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	64.0	2.2e-21
AXM33487.1|4014932_4017404_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.2	1.7e-224
AXM33488.1|4017547_4018834_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.9	9.0e-137
AXM33489.1|4018958_4019585_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
AXM33490.1|4019677_4020970_-	trigger factor	NA	NA	NA	NA	NA
AXM33491.1|4024287_4025049_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33492.1|4025192_4026200_-	isocitrate dehydrogenase	NA	NA	NA	NA	NA
AXM33493.1|4026463_4027429_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
4026306:4026370	attR	CCTAAGAACCTGTTCACGATCTCCTGAGCAGCAGTGCCAGGAACGCCAGGTGGATGAACTGCAAG	NA	NA	NA	NA
AXM33494.1|4027429_4028183_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33495.1|4028333_4028729_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
AXM33496.1|4028725_4029034_-	glutaredoxin 3	NA	A0A2L0UZG6	Agrobacterium_phage	43.2	4.7e-07
AXM33497.1|4029183_4030830_+	M48 family peptidase	NA	NA	NA	NA	NA
AXM33498.1|4031010_4031700_+	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	36.2	3.4e-34
AXM33499.1|4031757_4033101_+	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	33.8	3.8e-29
AXM34511.1|4033216_4035319_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
AXM33500.1|4035490_4037017_+	exopolyphosphatase	NA	NA	NA	NA	NA
AXM33501.1|4037221_4038358_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AXM33502.1|4038338_4038881_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AXM33503.1|4039528_4040272_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
AXM34512.1|4040451_4040871_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34513.1|4041939_4042764_-	DUF455 family protein	NA	NA	NA	NA	NA
AXM33504.1|4042902_4044369_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	39.7	1.4e-85
AXM33505.1|4044399_4045146_-	CvpA family protein	NA	NA	NA	NA	NA
AXM33506.1|4045360_4046443_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AXM33507.1|4046510_4047809_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AXM33508.1|4048780_4049425_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
AXM33509.1|4049516_4051667_-	S46 family peptidase	NA	NA	NA	NA	NA
AXM33510.1|4053878_4056212_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM34514.1|4056726_4057749_+	L-threonine 3-dehydrogenase	NA	NA	NA	NA	NA
AXM33511.1|4057818_4058532_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34515.1|4058885_4059920_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	3.4e-25
AXM33512.1|4059927_4060881_-	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA	NA
AXM33513.1|4060877_4061738_-	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA	NA
AXM33514.1|4061741_4062839_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXM33515.1|4062929_4064138_+	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	26.5	1.3e-20
AXM33516.1|4064140_4064533_+	HNH endonuclease	NA	NA	NA	NA	NA
AXM33517.1|4064483_4065344_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AXM33518.1|4065363_4065873_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33519.1|4066065_4067163_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34516.1|4067410_4067605_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33520.1|4067578_4068601_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
AXM33521.1|4068808_4070848_+	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA	NA
AXM33522.1|4070946_4072317_+	MFS transporter	NA	NA	NA	NA	NA
AXM33523.1|4072521_4073284_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33524.1|4074903_4075545_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34517.1|4076777_4077506_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	37.5	1.4e-06
AXM33525.1|4077551_4078514_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
AXM33526.1|4078618_4079381_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33527.1|4079375_4079618_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
AXM33528.1|4080166_4080628_+	cell wall hydrolase	NA	NA	NA	NA	NA
AXM33529.1|4080604_4080886_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33530.1|4080888_4081857_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM33531.1|4083253_4084052_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33532.1|4084293_4084908_+	glutathione S-transferase	NA	NA	NA	NA	NA
AXM33533.1|4084990_4085977_-	malate dehydrogenase	NA	NA	NA	NA	NA
AXM33534.1|4086092_4086587_-	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	52.3	5.5e-26
AXM33535.1|4086831_4088661_+	translational GTPase TypA	NA	NA	NA	NA	NA
AXM33536.1|4088679_4089150_+	DUF2127 domain-containing protein	NA	NA	NA	NA	NA
AXM33537.1|4090072_4091200_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AXM33538.1|4091300_4092683_-	3-deoxy-7-phosphoheptulonate synthase class II	NA	NA	NA	NA	NA
AXM33539.1|4092930_4095054_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM33540.1|4095582_4096101_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AXM33541.1|4098424_4099660_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM33542.1|4100273_4101164_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33543.1|4103763_4105083_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM34518.1|4105827_4106751_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.1	5.8e-37
AXM33544.1|4106938_4107736_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33545.1|4108646_4109409_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 35
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	4112410	4182095	5015823	transposase,protease	Acinetobacter_phage(16.67%)	49	NA	NA
AXM33547.1|4112410_4113174_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33548.1|4113240_4114455_+|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
AXM33549.1|4115825_4116623_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33550.1|4117595_4118480_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33551.1|4118626_4119223_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AXM34519.1|4119222_4120581_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
AXM33552.1|4120947_4121511_-	adenylate kinase	NA	A0A1B4XWI3	Tenacibaculum_phage	31.4	3.6e-13
AXM33553.1|4121670_4122927_+	6-phosphofructokinase	NA	NA	NA	NA	NA
AXM34520.1|4124607_4125099_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34521.1|4125383_4125557_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33554.1|4125553_4126519_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM33555.1|4128760_4129243_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33556.1|4129439_4129976_+	inorganic pyrophosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	53.6	3.6e-47
AXM33557.1|4130122_4131238_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
AXM33558.1|4131764_4132721_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33559.1|4132910_4135880_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	24.9	8.7e-42
AXM33560.1|4135925_4136819_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AXM33561.1|4139706_4141584_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
AXM33562.1|4142860_4143862_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AXM33563.1|4143905_4145627_+	acetolactate synthase 2 catalytic subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	32.9	6.1e-64
AXM33564.1|4145610_4145868_+	acetolactate synthase	NA	NA	NA	NA	NA
AXM33565.1|4145943_4147068_+	threonine dehydratase	NA	NA	NA	NA	NA
AXM33566.1|4147064_4148627_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	24.4	4.3e-08
AXM33567.1|4148957_4150031_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
AXM33568.1|4150847_4151495_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AXM33569.1|4151562_4153011_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
AXM34522.1|4153131_4154016_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXM33570.1|4155007_4155973_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM33571.1|4156141_4156603_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33572.1|4156872_4157526_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXM34523.1|4157654_4158311_+	protein-L-isoaspartate O-methyltransferase	NA	NA	NA	NA	NA
AXM33573.1|4158331_4159711_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33574.1|4159983_4161300_-	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AXM33575.1|4161376_4162297_+	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase	NA	NA	NA	NA	NA
AXM33576.1|4162530_4163865_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
AXM33577.1|4163845_4164958_-	glycosyltransferase	NA	NA	NA	NA	NA
AXM33578.1|4164967_4165165_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AXM33579.1|4165290_4165824_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33580.1|4166450_4167086_-	transcriptional regulator	NA	NA	NA	NA	NA
AXM33581.1|4169792_4172465_-	M1 family peptidase	NA	A0A0P0IY26	Acinetobacter_phage	28.0	7.5e-77
AXM33582.1|4172791_4174084_-	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	37.7	4.9e-74
AXM33583.1|4174421_4174607_-	DUF2065 family protein	NA	NA	NA	NA	NA
AXM33584.1|4174900_4175764_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AXM34524.1|4175763_4176891_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AXM33585.1|4177520_4177907_-	response regulator	NA	W8CYM9	Bacillus_phage	31.8	9.6e-10
AXM33586.1|4178146_4179046_-	J domain-containing protein	NA	A0A2L0UZR4	Agrobacterium_phage	27.7	5.9e-18
AXM33587.1|4179456_4179933_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
AXM33588.1|4180095_4180578_+	peroxiredoxin	NA	A0A1D8KSL1	Synechococcus_phage	36.2	3.1e-21
AXM33589.1|4181296_4182095_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 36
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	4214327	4283880	5015823	transposase,tRNA	Enterobacteria_phage(12.5%)	47	NA	NA
AXM33614.1|4214327_4215293_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM33615.1|4215404_4217696_+	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA	NA
AXM33616.1|4217823_4218498_+	type I-C CRISPR-associated protein Cas5	NA	NA	NA	NA	NA
AXM33617.1|4218494_4220339_+	type I-C CRISPR-associated protein Cas8c/Csd1	NA	NA	NA	NA	NA
AXM33618.1|4220335_4221202_+	type I-C CRISPR-associated protein Cas7/Csd2	NA	NA	NA	NA	NA
AXM33619.1|4221221_4221854_+	CRISPR-associated protein Cas4	NA	NA	NA	NA	NA
AXM33620.1|4221856_4222891_+	type I-C CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
AXM33621.1|4222905_4223196_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
AXM33622.1|4230486_4231326_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AXM33623.1|4231936_4233094_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA	NA
AXM33624.1|4233129_4235292_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM33625.1|4235667_4236243_+	nicotinamide riboside transporter PnuC	NA	NA	NA	NA	NA
AXM33626.1|4236348_4237077_+	UTRA domain-containing protein	NA	NA	NA	NA	NA
AXM33627.1|4237507_4238347_-	glycosyltransferase	NA	NA	NA	NA	NA
AXM33628.1|4238343_4240656_-	type II secretion system protein GspD	NA	A7BJX1	Enterobacteria_phage	23.5	5.2e-10
AXM33629.1|4240652_4241462_-	general secretion pathway protein GspN	NA	NA	NA	NA	NA
AXM33630.1|4241451_4242105_-	general secretion pathway protein GspM	NA	NA	NA	NA	NA
AXM33631.1|4242088_4243210_-	general secretion pathway protein GspL	NA	NA	NA	NA	NA
AXM33632.1|4243206_4244058_-	general secretion pathway protein GspK	NA	NA	NA	NA	NA
AXM33633.1|4244054_4244690_-	type II secretion system protein J	NA	NA	NA	NA	NA
AXM33634.1|4244686_4245103_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
AXM33635.1|4245099_4245609_-	type II secretion system protein GspH	NA	NA	NA	NA	NA
AXM34527.1|4245618_4246050_-	type II secretion system protein GspG	NA	NA	NA	NA	NA
AXM33636.1|4246317_4247535_-	type II secretion system F family protein	NA	NA	NA	NA	NA
AXM33637.1|4247534_4247714_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33638.1|4247710_4249450_-	type II secretion system protein GspE	NA	NA	NA	NA	NA
AXM33639.1|4251670_4255468_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33640.1|4255924_4256188_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33641.1|4256445_4260498_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	57.1	3.4e-121
AXM33642.1|4260896_4261694_-	DsbC family protein	NA	NA	NA	NA	NA
AXM33643.1|4262146_4263118_-	site-specific tyrosine recombinase XerD	NA	G1JX48	Mycobacterium_phage	27.9	6.4e-18
AXM33644.1|4263544_4264012_+	RDD family protein	NA	NA	NA	NA	NA
AXM34528.1|4264426_4265533_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
AXM33645.1|4265529_4266612_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
AXM33646.1|4266719_4268192_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.2	6.2e-49
AXM33647.1|4268191_4268497_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33648.1|4268537_4268963_+	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
AXM33649.1|4269170_4272113_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	34.8	8.4e-130
AXM33650.1|4272120_4272423_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33651.1|4273049_4274150_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.3	2.1e-41
AXM33652.1|4274336_4274651_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
AXM33653.1|4274717_4276037_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33654.1|4276173_4277142_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
AXM33655.1|4277341_4278661_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33656.1|4278980_4280021_+	pectate lyase	NA	NA	NA	NA	NA
AXM34529.1|4280287_4282333_-	lytic murein transglycosylase	NA	A0A0H3V0Q1	Geobacillus_virus	36.7	8.2e-15
AXM33657.1|4282560_4283880_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 37
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	4305843	4316471	5015823		Enterobacteria_phage(42.86%)	10	NA	NA
AXM33677.1|4305843_4307190_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.9	2.6e-33
AXM33678.1|4307236_4308640_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.6	2.5e-47
AXM33679.1|4308756_4309665_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.7	2.4e-27
AXM33680.1|4309661_4310219_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.1	1.0e-44
AXM33681.1|4310215_4311103_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	58.2	2.2e-94
AXM33682.1|4311158_4312214_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.0	4.3e-84
AXM33683.1|4312439_4313186_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
AXM33684.1|4313185_4314127_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
AXM33685.1|4314349_4315168_+	ABC transporter permease	NA	NA	NA	NA	NA
AXM33686.1|4315157_4316471_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	3.8e-13
>prophage 38
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	4415263	4461361	5015823	transposase,protease	Bacillus_phage(16.67%)	39	NA	NA
AXM33772.1|4415263_4417171_+|protease	protease	protease	A0A1B0T6A2	Bacillus_phage	31.0	3.0e-19
AXM33773.1|4417299_4417836_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33774.1|4418001_4418268_+	DUF3297 family protein	NA	NA	NA	NA	NA
AXM33775.1|4418410_4418596_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34542.1|4418681_4419443_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AXM33776.1|4419439_4420384_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.3	3.4e-24
AXM33777.1|4420630_4422268_-	Na+/H+ antiporter	NA	NA	NA	NA	NA
AXM33778.1|4422506_4422686_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33779.1|4422735_4423164_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34543.1|4423873_4424326_+	fasciclin domain-containing protein	NA	NA	NA	NA	NA
AXM33780.1|4424965_4426414_-	DUF4130 domain-containing protein	NA	NA	NA	NA	NA
AXM33781.1|4426420_4427665_-	putative DNA modification/repair radical SAM protein	NA	NA	NA	NA	NA
AXM33782.1|4427862_4428681_-	dioxygenase	NA	NA	NA	NA	NA
AXM33783.1|4428778_4429057_-	DoxX family membrane protein	NA	NA	NA	NA	NA
AXM33784.1|4429172_4429742_+	flavodoxin family protein	NA	NA	NA	NA	NA
AXM33785.1|4429881_4430877_+	aldo/keto reductase	NA	NA	NA	NA	NA
AXM33786.1|4430900_4431089_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33787.1|4431117_4431813_+	glycosyltransferase	NA	NA	NA	NA	NA
AXM34544.1|4431963_4434033_+	M13 family peptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	26.9	8.4e-60
AXM33788.1|4434371_4435229_-	DUF2236 domain-containing protein	NA	NA	NA	NA	NA
AXM34545.1|4435758_4436445_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33789.1|4436776_4438372_-	APC family permease	NA	NA	NA	NA	NA
AXM33790.1|4439851_4441183_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.0	6.1e-19
AXM33791.1|4441457_4442672_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AXM34546.1|4442704_4442959_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33792.1|4442980_4443175_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33793.1|4444486_4445284_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM33794.1|4447149_4447422_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33795.1|4447409_4449224_-	methyltransferase	NA	NA	NA	NA	NA
AXM33796.1|4449344_4449725_+	response regulator	NA	NA	NA	NA	NA
AXM33797.1|4449693_4449960_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33798.1|4449959_4451240_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXM33799.1|4451386_4451602_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33800.1|4452356_4453766_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AXM33801.1|4453756_4454773_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AXM33802.1|4456205_4457594_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM33803.1|4457891_4458848_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33804.1|4458923_4459892_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	2.5e-99
AXM33805.1|4460041_4461361_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 39
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	4477446	4519625	5015823	transposase,integrase,tRNA	Acinetobacter_phage(21.43%)	43	4475835:4475850	4527729:4527744
4475835:4475850	attL	GATCAGCACGCCCAGC	NA	NA	NA	NA
AXM33821.1|4477446_4478425_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	1.9e-38
AXM33822.1|4479482_4479953_-	bacterioferritin	NA	NA	NA	NA	NA
AXM34547.1|4480295_4480511_-	bacterioferritin	NA	NA	NA	NA	NA
AXM33823.1|4480591_4481209_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AXM33824.1|4481757_4482150_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
AXM33825.1|4482153_4482582_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
AXM34548.1|4482767_4483421_+	demethoxyubiquinone hydroxylase family protein	NA	NA	NA	NA	NA
AXM33826.1|4483697_4484012_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AXM33827.1|4484171_4484966_-	S-adenosylmethionine decarboxylase proenzyme	NA	NA	NA	NA	NA
AXM33828.1|4485103_4485796_+	CRP-like protein Clp	NA	NA	NA	NA	NA
AXM33829.1|4486116_4486833_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AXM33830.1|4486825_4487623_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	52.9	7.5e-65
AXM33831.1|4487759_4488797_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	44.1	7.2e-76
AXM33832.1|4488914_4489544_-	flavin reductase family protein	NA	NA	NA	NA	NA
AXM33833.1|4489540_4489699_-	molybdopterin biosynthesis protein	NA	NA	NA	NA	NA
AXM33834.1|4489695_4490277_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	59.3	3.2e-65
AXM33835.1|4490982_4491807_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33836.1|4491706_4492808_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.5	1.1e-39
AXM33837.1|4493412_4495644_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
AXM34549.1|4495833_4497546_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33838.1|4497694_4499071_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	1.9e-79
AXM33839.1|4499365_4500322_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.1	4.5e-40
AXM34550.1|4503627_4503873_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33840.1|4503869_4504142_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33841.1|4504138_4504345_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33842.1|4504302_4504566_+	hypothetical protein	NA	V9IQX6	Stenotrophomonas_phage	71.4	7.2e-17
AXM33843.1|4504478_4505753_+|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	50.3	1.4e-110
AXM33844.1|4506012_4506810_-	endonuclease	NA	NA	NA	NA	NA
AXM33845.1|4506806_4508081_-	DNA cytosine methyltransferase	NA	A0A191SB20	Nostoc_phage	37.4	8.3e-58
AXM33846.1|4508161_4508572_-	DNA mismatch endonuclease Vsr	NA	I6NSG0	Burkholderia_phage	52.0	7.0e-35
AXM33847.1|4509884_4510043_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33848.1|4510039_4510342_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33849.1|4510348_4511434_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
AXM33850.1|4511435_4511696_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33851.1|4511692_4512172_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33852.1|4512185_4512905_-	P-type DNA transfer protein VirB5	NA	NA	NA	NA	NA
AXM33853.1|4513255_4513540_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33854.1|4513536_4514376_-	helix-turn-helix domain-containing protein	NA	R9TPU9	Vibrio_phage	40.0	8.0e-09
AXM33855.1|4514372_4514606_-	plasmid-related protein	NA	NA	NA	NA	NA
AXM33856.1|4514844_4515939_-|integrase	site-specific integrase	integrase	A0A1L7DQ84	Ralstonia_phage	36.9	2.6e-52
AXM33857.1|4516688_4517009_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33858.1|4517201_4519076_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.5	1.8e-37
AXM33859.1|4519184_4519625_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
4527729:4527744	attR	GATCAGCACGCCCAGC	NA	NA	NA	NA
>prophage 40
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	4531625	4592751	5015823	transposase,tRNA	Staphylococcus_prophage(22.22%)	47	NA	NA
AXM33869.1|4531625_4532549_-|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
AXM33870.1|4532942_4533455_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.0	2.6e-18
AXM33871.1|4533587_4534724_+	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	57.1	1.7e-09
AXM33872.1|4534795_4535938_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
AXM33873.1|4535980_4536454_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
AXM33874.1|4536494_4537217_+	DUF4339 domain-containing protein	NA	NA	NA	NA	NA
AXM33875.1|4537258_4538533_+	RDD family protein	NA	NA	NA	NA	NA
AXM33876.1|4538715_4541208_+	DNA topoisomerase I	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	35.1	1.9e-114
AXM33877.1|4541218_4541782_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
AXM33878.1|4542005_4542779_+	DUF4124 domain-containing protein	NA	NA	NA	NA	NA
AXM33879.1|4542775_4543450_+	DUF4124 domain-containing protein	NA	NA	NA	NA	NA
AXM33880.1|4543611_4544388_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXM33881.1|4544494_4544710_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33882.1|4544895_4546797_-	signal peptide peptidase SppA	NA	A0A291AUM2	Sinorhizobium_phage	28.3	8.1e-09
AXM33883.1|4546881_4548258_-	MATE family efflux transporter	NA	NA	NA	NA	NA
AXM33884.1|4548766_4549612_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33885.1|4549942_4550545_-	DUF3106 domain-containing protein	NA	NA	NA	NA	NA
AXM33886.1|4550528_4551554_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33887.1|4552019_4554242_+	primosomal protein N'	NA	NA	NA	NA	NA
AXM33888.1|4554644_4555160_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AXM33889.1|4556615_4557581_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM33890.1|4557765_4558098_+	divalent-cation tolerance protein CutA	NA	NA	NA	NA	NA
AXM33891.1|4558103_4560428_+	cytochrome C biogenesis protein	NA	NA	NA	NA	NA
AXM33892.1|4560566_4560827_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33893.1|4560747_4560942_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33894.1|4561261_4561708_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AXM33895.1|4561806_4562292_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AXM34552.1|4562324_4562732_+	four helix bundle protein	NA	NA	NA	NA	NA
AXM33896.1|4562767_4564135_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AXM33897.1|4564273_4564639_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34553.1|4564635_4565028_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33898.1|4565096_4565531_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33899.1|4566133_4566520_+	hypothetical protein	NA	NA	NA	NA	NA
AXM33900.1|4566506_4567448_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AXM33901.1|4567594_4568110_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33902.1|4568253_4568631_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AXM34554.1|4569341_4570187_+	DUF3426 domain-containing protein	NA	NA	NA	NA	NA
AXM33903.1|4570293_4570566_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXM33904.1|4571250_4572216_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM33905.1|4572212_4572407_-	hypothetical protein	NA	NA	NA	NA	NA
AXM33906.1|4572561_4573938_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.2	1.9e-79
AXM33907.1|4573948_4574905_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33908.1|4575013_4575280_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34555.1|4575273_4576230_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM33909.1|4578706_4589431_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	35.6	3.6e-37
AXM33910.1|4589452_4591195_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	A0A0R6PI85	Moraxella_phage	25.7	4.3e-33
AXM33911.1|4591431_4592751_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 41
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	4735777	4855845	5015823	transposase,tRNA	Ralstonia_phage(13.33%)	90	NA	NA
AXM34009.1|4735777_4736782_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AXM34570.1|4737244_4737439_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34010.1|4738189_4738765_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
AXM34011.1|4738823_4740347_-	catalase	NA	A0A2K9L0T1	Tupanvirus	48.0	2.2e-97
AXM34012.1|4741037_4741508_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXM34571.1|4741469_4741658_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34013.1|4742718_4742985_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34014.1|4743065_4744034_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM34015.1|4744418_4746551_-	ATP-dependent DNA helicase DinG	NA	NA	NA	NA	NA
AXM34572.1|4747012_4747399_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34016.1|4747400_4748252_-	shikimate dehydrogenase	NA	NA	NA	NA	NA
AXM34017.1|4748304_4749186_+	TolB-like protein	NA	NA	NA	NA	NA
AXM34018.1|4749808_4752343_-	iron-uptake factor	NA	NA	NA	NA	NA
AXM34019.1|4752576_4753329_+	DNA/RNA non-specific endonuclease	NA	H6X497	Enterobacteria_phage	33.9	5.6e-22
AXM34020.1|4753456_4754371_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXM34021.1|4755643_4756636_-	porphobilinogen synthase	NA	NA	NA	NA	NA
AXM34022.1|4757300_4757759_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34023.1|4757858_4759649_-	DUF885 domain-containing protein	NA	NA	NA	NA	NA
AXM34024.1|4759857_4762095_-	S9 family peptidase	NA	NA	NA	NA	NA
AXM34025.1|4762519_4763209_-	glutathione S-transferase	NA	NA	NA	NA	NA
AXM34573.1|4763598_4766613_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXM34026.1|4766796_4767498_+	peptidase	NA	NA	NA	NA	NA
AXM34027.1|4767487_4768501_+	cupin-like domain-containing protein	NA	NA	NA	NA	NA
AXM34028.1|4768511_4770077_+	tryptophan 7-halogenase	NA	E3SL43	Synechococcus_phage	28.8	7.3e-40
AXM34029.1|4770216_4771227_+	energy transducer TonB	NA	NA	NA	NA	NA
AXM34030.1|4771636_4772830_-	ABC transporter permease	NA	NA	NA	NA	NA
AXM34031.1|4772826_4773573_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.9	1.5e-19
AXM34032.1|4773604_4775206_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXM34033.1|4775266_4775467_-	transcriptional regulator	NA	NA	NA	NA	NA
AXM34574.1|4775463_4776051_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34034.1|4776536_4776809_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA	NA
AXM34035.1|4776874_4777864_+	cation transporter	NA	NA	NA	NA	NA
AXM34036.1|4777948_4778710_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AXM34037.1|4778812_4779808_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	31.0	9.4e-25
AXM34575.1|4779825_4780617_+	ABC transporter permease	NA	NA	NA	NA	NA
AXM34038.1|4780619_4781369_+	DUF3800 domain-containing protein	NA	A0A1W6JTE9	Pseudomonas_phage	44.4	4.3e-54
AXM34576.1|4781487_4782426_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
AXM34039.1|4782425_4782608_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34040.1|4782852_4784088_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM34577.1|4784140_4785307_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34041.1|4787940_4789042_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	4.7e-41
AXM34042.1|4789164_4790121_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
AXM34043.1|4790860_4791623_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34044.1|4791683_4792481_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34045.1|4792833_4793118_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34046.1|4795464_4796574_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
AXM34047.1|4796604_4796799_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34048.1|4796808_4797453_+	SCP2 domain-containing protein	NA	NA	NA	NA	NA
AXM34049.1|4797449_4799123_+	ubiquinone biosynthesis protein UbiB	NA	E5EQY1	Bathycoccus_sp._RCC1105_virus	28.6	3.1e-28
AXM34050.1|4799236_4799626_+	cupin domain-containing protein	NA	NA	NA	NA	NA
AXM34051.1|4799850_4800603_+	pseudouridylate synthase	NA	NA	NA	NA	NA
AXM34052.1|4800698_4801241_-	DUF2059 domain-containing protein	NA	NA	NA	NA	NA
AXM34053.1|4801333_4801765_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AXM34054.1|4801767_4802397_+	acyltransferase	NA	NA	NA	NA	NA
AXM34055.1|4803033_4805202_+	peptidyl-dipeptidase Dcp	NA	NA	NA	NA	NA
AXM34056.1|4805328_4807491_-	type III secretion system effector protein	NA	NA	NA	NA	NA
AXM34057.1|4808317_4809283_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM34058.1|4809475_4810957_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	66.0	2.7e-100
AXM34578.1|4811393_4811759_-	L-rhamnose mutarotase	NA	NA	NA	NA	NA
AXM34059.1|4811755_4813057_-	L-fucose:H+ symporter permease	NA	NA	NA	NA	NA
AXM34060.1|4813237_4814014_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AXM34061.1|4814142_4814906_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34062.1|4815306_4815891_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34579.1|4816083_4819533_-	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
AXM34063.1|4819673_4819874_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34064.1|4820280_4822923_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34580.1|4823026_4825426_-	NdvB protein	NA	NA	NA	NA	NA
AXM34065.1|4825428_4826811_-	MFS transporter	NA	NA	NA	NA	NA
AXM34066.1|4826968_4827553_+	gluconokinase	NA	NA	NA	NA	NA
AXM34067.1|4828445_4830200_+	polyvinylalcohol dehydrogenase	NA	A0A0M4JT37	Mollivirus	35.6	7.3e-81
AXM34068.1|4830507_4830813_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34581.1|4830715_4831156_-	3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AXM34069.1|4831175_4831604_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34070.1|4833098_4834418_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM34071.1|4837289_4838258_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXM34072.1|4839540_4840860_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM34073.1|4840947_4841172_-|transposase	transposase	transposase	NA	NA	NA	NA
AXM34074.1|4841152_4842388_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
AXM34075.1|4844069_4845026_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.4	1.0e-39
AXM34076.1|4845870_4846836_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXM34077.1|4846853_4847411_+	N-acetyltransferase	NA	NA	NA	NA	NA
AXM34078.1|4847429_4847717_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34079.1|4848101_4848896_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.8	1.7e-08
AXM34080.1|4848895_4849645_+	ABC transporter permease	NA	NA	NA	NA	NA
AXM34081.1|4849656_4850208_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
AXM34082.1|4850204_4850867_+	organic solvent ABC transporter	NA	NA	NA	NA	NA
AXM34083.1|4850856_4851147_+	STAS domain-containing protein	NA	NA	NA	NA	NA
AXM34084.1|4851157_4852216_+	VacJ family lipoprotein	NA	NA	NA	NA	NA
AXM34085.1|4854014_4854778_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXM34086.1|4854882_4855845_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 42
CP031463	Xanthomonas oryzae pv. oryzae strain PX086 chromosome, complete genome	5015823	4943223	4988585	5015823	transposase,protease	Acidithiobacillus_phage(25.0%)	32	NA	NA
AXM34149.1|4943223_4944189_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
AXM34587.1|4944364_4945780_-	amino acid permease	NA	NA	NA	NA	NA
AXM34150.1|4945996_4946206_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34151.1|4946270_4948595_+	DNA recombination protein RmuC	NA	NA	NA	NA	NA
AXM34588.1|4948952_4949363_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34589.1|4949740_4950286_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	33.9	2.6e-16
AXM34152.1|4950381_4951758_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	1.1e-76
AXM34153.1|4952794_4953922_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
AXM34154.1|4954777_4956118_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34155.1|4956334_4957027_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AXM34590.1|4957150_4957471_+	DUF1820 family protein	NA	NA	NA	NA	NA
AXM34156.1|4957470_4958463_+	D-2-hydroxyacid dehydrogenase family protein	NA	M1HUT5	Acanthocystis_turfacea_Chlorella_virus	27.4	8.5e-10
AXM34157.1|4958769_4960293_-	PDZ domain-containing protein	NA	A0A0R6PIZ1	Moraxella_phage	29.2	1.7e-25
AXM34158.1|4960397_4961633_-	peptidase M23	NA	NA	NA	NA	NA
AXM34159.1|4961793_4962450_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34160.1|4962600_4964412_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
AXM34161.1|4964559_4964910_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AXM34162.1|4965088_4966408_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXM34163.1|4967820_4969002_-	hypothetical protein	NA	NA	NA	NA	NA
AXM34164.1|4969099_4972531_-	ATP-binding protein	NA	NA	NA	NA	NA
AXM34165.1|4972678_4973377_-	DUF4194 domain-containing protein	NA	NA	NA	NA	NA
AXM34166.1|4973360_4974833_-	DUF3375 domain-containing protein	NA	NA	NA	NA	NA
AXM34167.1|4974829_4975417_-	DUF4276 family protein	NA	NA	NA	NA	NA
AXM34168.1|4975416_4976613_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AXM34169.1|4976686_4977316_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	48.9	1.2e-46
AXM34170.1|4977996_4978524_+	TolC family protein	NA	NA	NA	NA	NA
AXM34171.1|4978520_4979087_+	FUSC family protein	NA	NA	NA	NA	NA
AXM34172.1|4979362_4980724_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	26.9	8.3e-32
AXM34173.1|4980985_4981942_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.7	2.4e-41
AXM34591.1|4984031_4984238_+	hypothetical protein	NA	NA	NA	NA	NA
AXM34174.1|4984218_4985337_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AXM34175.1|4987208_4988585_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	5.4e-79
