assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003402895.1_ASM340289v1	CP031552	Pasteurella multocida strain TB168 chromosome, complete genome	1	209135-210002	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3-cas2,cas1,cas6f,cas7f,cas5f	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Unclear	TTTCTAAGCCATCTACACGATGGTGAAC,TTTCTAAGCCATCTACACGATGGTGAAC,TTTCTAAGCCATCTACACGATGGTGAAC	28,28,28	0	0	NA	NA	NA:NA:NA	14,14,14	14	Unclear	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|197aa|up_3|CP031552.1_202038_202629_-,NA|604aa|down_3|CP031552.1_212784_214596_+,NA|206aa|down_8|CP031552.1_222670_223288_+	NA|108aa|up_9|CP031552.1_197425_197749_-	TIGR02011, Protein_yfhF	NA|129aa|up_8|CP031552.1_197818_198205_-	PRK11325, PRK11325, scaffold protein; Provisional	NA|405aa|up_7|CP031552.1_198436_199651_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|155aa|up_6|CP031552.1_199698_200163_-	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|239aa|up_5|CP031552.1_200241_200958_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|268aa|up_4|CP031552.1_201171_201975_+	PRK10757, PRK10757, inositol-1-monophosphatase	NA|197aa|up_3|CP031552.1_202038_202629_-	NA	NA|619aa|up_2|CP031552.1_202769_204626_-	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	cas3-cas2|1107aa|up_1|CP031552.1_204683_208004_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|327aa|up_0|CP031552.1_207984_208965_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas6f|187aa|down_0|CP031552.1_210142_210703_-	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	cas7f|336aa|down_1|CP031552.1_210705_211713_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|321aa|down_2|CP031552.1_211715_212678_-	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	NA|604aa|down_3|CP031552.1_212784_214596_+	NA	NA|955aa|down_4|CP031552.1_214604_217469_+	PRK11054, helD, DNA helicase IV; Provisional	NA|403aa|down_5|CP031552.1_217863_219072_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|223aa|down_6|CP031552.1_219510_220179_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|402aa|down_7|CP031552.1_220291_221497_-	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|206aa|down_8|CP031552.1_222670_223288_+	NA	NA|524aa|down_9|CP031552.1_223341_224913_+	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX
GCA_003402895.1_ASM340289v1	CP031552	Pasteurella multocida strain TB168 chromosome, complete genome	2	231282-231434	2	CRISPRCasFinder	no	cas5f,cas8f	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Type I-F	TTATGACATTTATTTCTGGTTTTTA	25	0	0	NA	NA	NA	2	2	TypeI-F	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|206aa|up_6|CP031552.1_222670_223288_+,NA|75aa|up_4|CP031552.1_224974_225199_-,NA|486aa|up_3|CP031552.1_225316_226774_-,NA|88aa|down_8|CP031552.1_244275_244539_+,NA|282aa|down_9|CP031552.1_250430_251276_+	NA|403aa|up_9|CP031552.1_217863_219072_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|223aa|up_8|CP031552.1_219510_220179_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|402aa|up_7|CP031552.1_220291_221497_-	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|206aa|up_6|CP031552.1_222670_223288_+	NA	NA|524aa|up_5|CP031552.1_223341_224913_+	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX	NA|75aa|up_4|CP031552.1_224974_225199_-	NA	NA|486aa|up_3|CP031552.1_225316_226774_-	NA	NA|373aa|up_2|CP031552.1_226734_227853_-	pfam06527, TniQ, TniQ	NA|296aa|up_1|CP031552.1_227810_228698_-	pfam05621, TniB, Bacterial TniB protein	NA|643aa|up_0|CP031552.1_228697_230626_-	pfam00665, rve, Integrase core domain	cas8f|445aa|down_0|CP031552.1_231468_232803_-	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	NA|720aa|down_1|CP031552.1_233033_235193_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|683aa|down_2|CP031552.1_235326_237375_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|371aa|down_3|CP031552.1_237556_238669_+	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|90aa|down_4|CP031552.1_238807_239077_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|968aa|down_5|CP031552.1_239243_242147_-	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|172aa|down_6|CP031552.1_242188_242704_-	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ	NA|164aa|down_7|CP031552.1_242719_243211_-	COG3721, HugX, Putative heme iron utilization protein [Inorganic ion transport and metabolism]	NA|88aa|down_8|CP031552.1_244275_244539_+	NA	NA|282aa|down_9|CP031552.1_250430_251276_+	NA
GCA_003402895.1_ASM340289v1	CP031552	Pasteurella multocida strain TB168 chromosome, complete genome	3	765822-767169	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Unclear	TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC	28,28,28	3	3	766930-766961|766990-767021|767050-767081	CP031552.1_1091580-1091549|CP031552.1_981218-981187|CP031552.1_1726888-1726857	I-F:I-F:I-F	22,22,21	22	Unclear	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA,NA	NA|529aa|up_9|CP031552.1_753928_755515_-	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|456aa|up_8|CP031552.1_755873_757241_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|204aa|up_7|CP031552.1_757268_757880_-	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|309aa|up_6|CP031552.1_758065_758992_+	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|481aa|up_5|CP031552.1_759029_760472_+	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|340aa|up_4|CP031552.1_760497_761517_+	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|475aa|up_3|CP031552.1_761745_763170_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|136aa|up_2|CP031552.1_763285_763693_+	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|349aa|up_1|CP031552.1_763761_764808_+	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|322aa|up_0|CP031552.1_764804_765770_+	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	cas3|443aa|down_0|CP031552.1_767316_768645_-	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|238aa|down_1|CP031552.1_768756_769470_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|235aa|down_2|CP031552.1_769517_770222_-	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|968aa|down_3|CP031552.1_770497_773401_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_4|CP031552.1_773481_774141_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|190aa|down_5|CP031552.1_774204_774774_+	pfam04220, YihI, Der GTPase activator (YihI)	NA|143aa|down_6|CP031552.1_774779_775208_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|456aa|down_7|CP031552.1_775231_776599_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|223aa|down_8|CP031552.1_776639_777308_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|112aa|down_9|CP031552.1_777403_777739_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCA_003402895.1_ASM340289v1	CP031552	Pasteurella multocida strain TB168 chromosome, complete genome	4	817418-817570	4	CRISPRCasFinder	no		cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Orphan	TAAAAACTAGAAATAAATGTCATAA	25	0	0	NA	NA	NA	2	2	Orphan	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA,NA|486aa|down_4|CP031552.1_822078_823536_+,NA|75aa|down_5|CP031552.1_823653_823878_+,NA|219aa|down_7|CP031552.1_825564_826221_-	NA|355aa|up_9|CP031552.1_801594_802659_+	PRK09354, recA, recombinase A; Provisional	NA|152aa|up_8|CP031552.1_802768_803224_+	PRK00117, recX, recombination regulator RecX; Reviewed	NA|422aa|up_7|CP031552.1_803318_804584_-	COG3071, HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|468aa|up_6|CP031552.1_804596_806000_-	COG2959, HemX, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|249aa|up_5|CP031552.1_806040_806787_-	COG1587, HemD, Uroporphyrinogen-III synthase [Coenzyme metabolism]	NA|309aa|up_4|CP031552.1_806803_807730_-	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|839aa|up_3|CP031552.1_807884_810401_+	COG3072, CyaA, Adenylate cyclase [Nucleotide transport and metabolism]	NA|210aa|up_2|CP031552.1_810416_811046_+	PRK10403, PRK10403, nitrate/nitrite response regulator protein NarP	NA|587aa|up_1|CP031552.1_811195_812956_+	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|1301aa|up_0|CP031552.1_813033_816936_+	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|221aa|down_0|CP031552.1_817574_818237_+	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	NA|643aa|down_1|CP031552.1_818226_820155_+	pfam00665, rve, Integrase core domain	NA|296aa|down_2|CP031552.1_820154_821042_+	pfam05621, TniB, Bacterial TniB protein	NA|373aa|down_3|CP031552.1_820999_822118_+	pfam06527, TniQ, TniQ	NA|486aa|down_4|CP031552.1_822078_823536_+	NA	NA|75aa|down_5|CP031552.1_823653_823878_+	NA	NA|524aa|down_6|CP031552.1_823939_825511_-	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX	NA|219aa|down_7|CP031552.1_825564_826221_-	NA	NA|402aa|down_8|CP031552.1_827356_828562_+	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|223aa|down_9|CP031552.1_828674_829343_-	COG1309, AcrR, Transcriptional regulator [Transcription]
GCA_003402895.1_ASM340289v1	CP031552	Pasteurella multocida strain TB168 chromosome, complete genome	5	1184038-1184190	5	CRISPRCasFinder	no		cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Orphan	TAAAAACTAGAAATAAATGTCATAA	25	0	0	NA	NA	NA	2	2	Orphan	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|229aa|up_1|CP031552.1_1179504_1180191_+,NA|486aa|down_4|CP031552.1_1188698_1190156_+,NA|75aa|down_5|CP031552.1_1190273_1190498_+,NA|219aa|down_7|CP031552.1_1192184_1192841_-	NA|330aa|up_9|CP031552.1_1170909_1171899_+	cd13547, PBP2_Fbp_like_2, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|363aa|up_8|CP031552.1_1171913_1173002_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|565aa|up_7|CP031552.1_1173004_1174699_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|353aa|up_6|CP031552.1_1174720_1175779_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|155aa|up_5|CP031552.1_1175964_1176429_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|228aa|up_4|CP031552.1_1176549_1177233_-	PRK14118, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA|424aa|up_3|CP031552.1_1177373_1178645_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|281aa|up_2|CP031552.1_1178641_1179484_+	COG2861, COG2861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|229aa|up_1|CP031552.1_1179504_1180191_+	NA	NA|854aa|up_0|CP031552.1_1180297_1182859_-	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|221aa|down_0|CP031552.1_1184194_1184857_+	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	NA|643aa|down_1|CP031552.1_1184846_1186775_+	pfam00665, rve, Integrase core domain	NA|296aa|down_2|CP031552.1_1186774_1187662_+	pfam05621, TniB, Bacterial TniB protein	NA|373aa|down_3|CP031552.1_1187619_1188738_+	pfam06527, TniQ, TniQ	NA|486aa|down_4|CP031552.1_1188698_1190156_+	NA	NA|75aa|down_5|CP031552.1_1190273_1190498_+	NA	NA|524aa|down_6|CP031552.1_1190559_1192131_-	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX	NA|219aa|down_7|CP031552.1_1192184_1192841_-	NA	NA|402aa|down_8|CP031552.1_1193976_1195182_+	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|223aa|down_9|CP031552.1_1195294_1195963_-	COG1309, AcrR, Transcriptional regulator [Transcription]
