The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031555	Thalassospira indica strain PB8BT chromosome, complete genome	4701725	254759	262027	4701725		Bacillus_virus(16.67%)	9	NA	NA
AXO13022.1|254759_255305_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.1	5.0e-12
AXO13023.1|255381_256260_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	26.4	3.2e-16
AXO16654.1|256396_257086_+	LysE family translocator	NA	NA	NA	NA	NA
AXO13024.1|257107_257539_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13025.1|257528_258332_-	molybdopterin-synthase adenylyltransferase MoeB	NA	A0A291ATS8	Pandoravirus	34.5	1.0e-08
AXO16655.1|258558_259509_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	54.2	9.5e-83
AXO16656.1|259712_260168_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
AXO13026.1|260261_260726_-	dUTP diphosphatase	NA	A0A1Q1PNN8	Noumeavirus	58.8	1.6e-38
AXO13027.1|260800_262027_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.2	6.8e-33
>prophage 2
CP031555	Thalassospira indica strain PB8BT chromosome, complete genome	4701725	1112977	1194533	4701725	protease,portal,plate,integrase,capsid,tRNA,tail,terminase	Burkholderia_phage(22.22%)	82	1103410:1103427	1204732:1204749
1103410:1103427	attL	GCGCAATGTGCCGGGCAT	NA	NA	NA	NA
AXO13713.1|1112977_1113943_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AXO13714.1|1113997_1114921_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.3	7.7e-13
AXO13715.1|1115086_1115614_+	peroxiredoxin	NA	NA	NA	NA	NA
AXO13716.1|1115796_1116333_+	alkyl hydroperoxide reductase	NA	NA	NA	NA	NA
AXO13717.1|1116415_1117918_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AXO13718.1|1117928_1118369_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AXO13719.1|1118447_1119413_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXO13720.1|1119597_1120269_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXO13721.1|1120159_1121656_+	sensor histidine kinase	NA	NA	NA	NA	NA
AXO13722.1|1121652_1122735_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXO13723.1|1122774_1123581_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXO13724.1|1123735_1124938_-	aspartate transaminase	NA	NA	NA	NA	NA
AXO13725.1|1125254_1127390_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
AXO13726.1|1127469_1128438_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
AXO16732.1|1128662_1129556_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXO13727.1|1129645_1130515_+	putative hydro-lyase	NA	NA	NA	NA	NA
AXO13728.1|1130532_1131585_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXO16733.1|1131625_1132162_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AXO13729.1|1132158_1133439_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AXO13730.1|1133566_1134250_+	DUF2848 domain-containing protein	NA	NA	NA	NA	NA
AXO13731.1|1134296_1135571_+|tRNA	glutamyl-tRNA amidotransferase	tRNA	NA	NA	NA	NA
AXO13732.1|1135621_1136587_-	oxidoreductase	NA	NA	NA	NA	NA
AXO13733.1|1136720_1137506_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXO13734.1|1138786_1139821_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXO13735.1|1139969_1140440_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	40.6	1.4e-18
AXO13736.1|1141327_1142716_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A218MLZ2	uncultured_virus	28.4	7.0e-18
AXO13737.1|1143638_1144571_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXO13738.1|1144883_1145834_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	43.6	7.0e-70
AXO13739.1|1146179_1146665_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AXO13740.1|1146741_1148511_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13741.1|1148507_1148957_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13742.1|1148937_1150377_-	CHASE2 domain-containing protein	NA	NA	NA	NA	NA
AXO13743.1|1150727_1151201_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
AXO16734.1|1151304_1154547_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
AXO13744.1|1154643_1155810_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	32.9	5.4e-48
AXO13745.1|1156178_1156634_+	GatB/YqeY domain-containing protein	NA	NA	NA	NA	NA
AXO13746.1|1156794_1158684_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	37.6	5.4e-98
AXO13747.1|1158800_1160879_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	36.2	4.2e-35
AXO16735.1|1161229_1162189_-|integrase	site-specific integrase	integrase	G8DH71	Emiliania_huxleyi_virus	44.7	1.5e-75
AXO13748.1|1162314_1162506_-	hypothetical protein	NA	NA	NA	NA	NA
AXO16736.1|1162502_1162874_-	hypothetical protein	NA	A0A291AUQ6	Sinorhizobium_phage	44.9	3.0e-24
AXO13749.1|1163351_1164230_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13750.1|1164493_1164706_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13751.1|1164724_1165360_-	hypothetical protein	NA	A0A291AUT5	Sinorhizobium_phage	60.7	3.5e-73
AXO16737.1|1165360_1168000_-	bifunctional DNA primase/helicase	NA	A0A077K8T2	Ralstonia_phage	45.5	5.3e-216
AXO13752.1|1167996_1168278_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13753.1|1168280_1168544_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13754.1|1168880_1169189_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AXO13755.1|1169222_1169624_+	XRE family transcriptional regulator	NA	Q8W6N2	Burkholderia_virus	38.8	1.0e-06
AXO13756.1|1169729_1169972_-	transcriptional regulator	NA	NA	NA	NA	NA
AXO13757.1|1169975_1170491_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13758.1|1170537_1171077_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXO13759.1|1171236_1171965_+	hypothetical protein	NA	A0A0R6PJV6	Moraxella_phage	68.9	2.7e-29
AXO13760.1|1171965_1172940_-	phage late control D family protein	NA	A0A2H4JAV0	uncultured_Caudovirales_phage	39.6	5.0e-63
AXO13761.1|1172936_1173356_-	oxidoreductase	NA	A0A1S5NTH4	Burkholderia_phage	47.4	3.5e-29
AXO13762.1|1173357_1175742_-|tail	phage tail tape measure protein	tail	A0A2H4JE61	uncultured_Caudovirales_phage	40.2	5.1e-93
AXO13763.1|1175935_1176250_-|tail	phage tail assembly protein	tail	V9IQX8	Stenotrophomonas_phage	39.4	1.3e-09
AXO13764.1|1176314_1176830_-|tail	phage major tail tube protein	tail	A0A1S5NNH7	Burkholderia_phage	39.6	1.2e-23
AXO13765.1|1176872_1178045_-|tail	phage tail protein	tail	A0A2H4JCP8	uncultured_Caudovirales_phage	66.4	2.4e-152
AXO13766.1|1178051_1178729_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
AXO13767.1|1178744_1179668_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13768.1|1180267_1180462_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13769.1|1181033_1181930_-	hypothetical protein	NA	A0A0A7RTP0	Clostridium_phage	52.0	3.0e-38
AXO13770.1|1181926_1182562_-|tail	phage tail protein I	tail	A0A077KER5	Ralstonia_phage	40.3	9.6e-31
AXO13771.1|1182558_1183488_-|plate	baseplate assembly protein	plate	A0A0F7LCQ9	Escherichia_phage	45.5	4.5e-61
AXO13772.1|1183484_1183832_-	hypothetical protein	NA	D4HTV2	Vibrio_phage	50.0	8.3e-21
AXO13773.1|1183836_1184130_-	PaaR repeat-containing protein	NA	K4ICQ1	Acidithiobacillus_phage	50.5	1.7e-19
AXO13774.1|1184129_1184600_-|plate	phage baseplate assembly protein V	plate	V5YUM9	Pseudomonas_phage	34.1	1.1e-10
AXO13775.1|1184676_1185141_-	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	39.2	1.6e-19
AXO13776.1|1185140_1185626_-	hypothetical protein	NA	R4JET5	Burkholderia_phage	28.4	8.1e-06
AXO13777.1|1185739_1186123_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13778.1|1186119_1186569_-	lytic transglycosylase domain-containing protein	NA	K7RVN3	Vibrio_phage	55.1	2.1e-32
AXO13779.1|1186609_1186792_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13780.1|1186821_1187016_-	hypothetical protein	NA	NA	NA	NA	NA
AXO13781.1|1187018_1187219_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JT40	Escherichia_phage	48.6	4.2e-09
AXO13782.1|1187218_1187677_-	hypothetical protein	NA	E5E3W6	Burkholderia_phage	36.5	9.7e-17
AXO13783.1|1187781_1188441_-|terminase	terminase	terminase	K4NX86	Burkholderia_phage	41.7	2.5e-34
AXO13784.1|1188440_1189448_-|capsid	phage major capsid protein, P2 family	capsid	E5E3S4	Burkholderia_phage	51.0	9.0e-100
AXO16738.1|1189491_1190277_-|capsid	phage capsid protein	capsid	E5E3S5	Burkholderia_phage	47.1	4.5e-54
AXO13785.1|1190426_1192211_+	oxidoreductase	NA	A4JWU9	Burkholderia_virus	56.6	1.5e-185
AXO13786.1|1192212_1193226_+|portal	phage portal protein	portal	E5E3X1	Burkholderia_phage	56.5	4.2e-105
AXO13787.1|1193699_1194533_-	DNA adenine methylase	NA	A0A219VHB5	Ochrobactrum_phage	59.9	1.1e-87
1204732:1204749	attR	GCGCAATGTGCCGGGCAT	NA	NA	NA	NA
>prophage 3
CP031555	Thalassospira indica strain PB8BT chromosome, complete genome	4701725	2542509	2552703	4701725	tRNA	uncultured_Mediterranean_phage(80.0%)	12	NA	NA
AXO14878.1|2542509_2543379_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	38.2	1.3e-38
AXO14879.1|2543397_2544234_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	50.9	4.5e-44
AXO14880.1|2544338_2545382_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.9	2.7e-30
AXO14881.1|2545556_2545793_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	42.1	8.8e-06
AXO14882.1|2545828_2546227_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
AXO14883.1|2546223_2547225_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	56.0	2.7e-64
AXO14884.1|2547325_2548600_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.6	2.6e-104
AXO14885.1|2548612_2549380_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	37.1	9.8e-38
AXO14886.1|2549376_2550030_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	45.3	1.1e-32
AXO14887.1|2550114_2551167_+	LysM peptidoglycan-binding domain-containing protein	NA	V5R8R0	Arthrobacter_phage	39.5	3.1e-10
AXO14888.1|2551226_2552090_-	ATP-binding protein	NA	NA	NA	NA	NA
AXO14889.1|2552325_2552703_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	51.7	2.2e-19
>prophage 4
CP031555	Thalassospira indica strain PB8BT chromosome, complete genome	4701725	3257241	3265819	4701725	transposase	Enterobacteria_phage(33.33%)	7	NA	NA
AXO15473.1|3257241_3258531_+|transposase	ISL3-like element ISPpu12 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	40.4	9.5e-86
AXO15474.1|3258798_3259356_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A218MN57	uncultured_virus	44.5	8.1e-34
AXO15475.1|3259362_3260244_-	glucose-1-phosphate thymidylyltransferase	NA	K7QKA7	Escherichia_phage	59.5	1.8e-91
AXO15476.1|3260236_3261148_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	34.9	1.1e-32
AXO15477.1|3261140_3262211_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.1	6.0e-94
AXO15478.1|3262390_3263869_-	hypothetical protein	NA	NA	NA	NA	NA
AXO15479.1|3263995_3265819_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	39.3	3.9e-109
>prophage 5
CP031555	Thalassospira indica strain PB8BT chromosome, complete genome	4701725	3473309	3480263	4701725		Pseudomonas_phage(33.33%)	9	NA	NA
AXO15646.1|3473309_3474104_+	DUF5131 family protein	NA	R9TNA8	Rhizobium_phage	43.7	1.3e-53
AXO15647.1|3474075_3474987_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA	NA
AXO15648.1|3475253_3475724_-	helix-turn-helix domain-containing protein	NA	K4ICM4	Acidithiobacillus_phage	39.3	1.1e-18
AXO15649.1|3475860_3476349_-	ribokinase	NA	A0A1D9CA16	Salinivibrio_phage	41.2	5.3e-13
AXO15650.1|3476524_3476989_-	cell wall hydrolase	NA	A0A1B0VMI2	Pseudomonas_phage	44.0	1.6e-22
AXO15651.1|3476981_3477305_-	hypothetical protein	NA	NA	NA	NA	NA
AXO15652.1|3477391_3477814_-	DoxX family protein	NA	NA	NA	NA	NA
AXO15653.1|3478141_3478447_-	hypothetical protein	NA	F4YXP2	Roseobacter_phage	36.8	5.4e-08
AXO15654.1|3478754_3480263_-	hypothetical protein	NA	F0V710	Pseudomonas_phage	36.1	2.4e-24
