The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031609	Escherichia coli strain S10 chromosome, complete genome	4821441	2726086	2735528	4821441		Enterobacteria_phage(85.71%)	10	NA	NA
AXO84263.1|2726086_2727013_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	1.3e-23
AXO84264.1|2727017_2727749_+	ABC transporter permease	NA	NA	NA	NA	NA
AXO84265.1|2727729_2727837_-	protein YohO	NA	NA	NA	NA	NA
AXO84266.1|2727896_2728628_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.0	2.8e-111
AXO84267.1|2728849_2730535_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
AXO84268.1|2730531_2731251_+	two-component system response regulator YehT	NA	NA	NA	NA	NA
AXO84269.1|2731297_2731768_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
AXO84270.1|2731808_2732270_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
AXO84271.1|2732394_2734395_-	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	95.4	0.0e+00
AXO84272.1|2734391_2735528_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.4	4.2e-162
>prophage 2
CP031609	Escherichia coli strain S10 chromosome, complete genome	4821441	3675967	3731167	4821441	lysis,holin,tail,terminase,capsid,head,tRNA,integrase,portal	Enterobacteria_phage(58.18%)	67	3726073:3726088	3729275:3729290
AXO85083.1|3675967_3676699_+	helix-turn-helix-type transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	50.5	3.5e-53
AXO85084.1|3676919_3677324_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
AXO85085.1|3678026_3678350_+	anti-adapter protein IraM	NA	Q20GJ2	Phage_258-320	66.4	4.0e-41
AXO85086.1|3678452_3678605_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	1.6e-21
AXO85087.1|3678798_3678951_-	hypothetical protein	NA	NA	NA	NA	NA
AXO85088.1|3679116_3683571_-	ATP-binding protein	NA	A0A2H4PQV1	Staphylococcus_phage	33.1	4.8e-44
AXO86233.1|3684102_3684390_-	hypothetical protein	NA	NA	NA	NA	NA
AXO85089.1|3684432_3685473_-|tail	tail fiber domain-containing protein	tail	A0A0E3M4A9	Enterobacteria_phage	82.0	8.3e-157
AXO85090.1|3685485_3685755_-	hypothetical protein	NA	NA	NA	NA	NA
AXO85091.1|3685754_3688112_-|tail	phage tail protein	tail	A0A1X7QGG5	Escherichia_phage	50.1	1.7e-117
AXO85092.1|3688176_3688776_-	Ail/Lom family protein	NA	A0A291AWV3	Escherichia_phage	99.5	3.0e-111
AXO85093.1|3688845_3692259_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	97.2	0.0e+00
AXO85094.1|3692319_3692991_-|tail	tail assembly protein	tail	A0A2R9YJH6	Escherichia_phage	97.3	4.9e-102
AXO85095.1|3692888_3693632_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	98.0	5.9e-149
AXO85096.1|3693637_3694336_-|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	98.7	2.1e-132
AXO85097.1|3694335_3694665_-|tail	phage tail protein	tail	A0A2R9YJM0	Escherichia_phage	99.1	5.6e-59
AXO85098.1|3694661_3697223_-|tail	phage tail tape measure protein	tail	A0A0K2FI43	Enterobacteria_phage	99.3	0.0e+00
AXO85099.1|3697215_3697650_-|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	100.0	6.9e-65
AXO85100.1|3697631_3698054_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	100.0	6.7e-73
AXO86234.1|3698069_3698810_-|tail	phage tail protein	tail	A0A0K2FJ05	Enterobacteria_phage	99.6	5.0e-132
AXO85101.1|3698817_3699213_-|tail	phage tail protein	tail	A0A0K2FIF4	Enterobacteria_phage	99.2	1.1e-69
AXO85102.1|3699798_3700152_-|tail	phage tail protein	tail	A0A2R9YJJ5	Escherichia_phage	99.1	9.9e-62
AXO85103.1|3700163_3700562_-	DNA-packaging protein FI	NA	A0A0K2FIR1	Enterobacteria_phage	96.2	2.5e-61
AXO85104.1|3700603_3701629_-|capsid	minor capsid protein E	capsid	C6ZCY2	Enterobacteria_phage	98.8	1.9e-190
AXO85105.1|3701684_3702017_-|head	head decoration protein	head	C6ZCY1	Enterobacteria_phage	100.0	2.2e-55
AXO85106.1|3702026_3703346_-	S49 family peptidase	NA	A0A2I6TC87	Escherichia_phage	97.9	1.3e-231
AXO85107.1|3703326_3704928_-|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	99.4	3.8e-310
AXO85108.1|3704924_3705131_-|head,tail	Lambda prophage-derived head-to-tail joining protein W	head,tail	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
AXO85109.1|3705127_3707053_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	99.7	0.0e+00
AXO85110.1|3707027_3707573_-|terminase	terminase small subunit	terminase	A0A0K2FIG2	Enterobacteria_phage	99.4	6.2e-95
AXO85111.1|3707957_3708098_+	hypothetical protein	NA	NA	NA	NA	NA
AXO85112.1|3708196_3708571_-	hypothetical protein	NA	M1FPD9	Enterobacteria_phage	87.9	5.6e-55
AXO85113.1|3708609_3709074_-|lysis	lysis protein	lysis	M1FJ79	Enterobacteria_phage	89.6	6.5e-69
AXO85114.1|3709070_3709547_-	lysozyme	NA	K7PKV2	Enterobacteria_phage	94.9	5.6e-84
AXO85115.1|3709533_3709851_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	86.1	3.3e-40
AXO85116.1|3710160_3710850_-	antitermination protein	NA	I6PDF8	Cronobacter_phage	48.1	8.4e-57
AXO85117.1|3710846_3710987_-	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	71.1	1.3e-09
AXO85118.1|3710983_3711346_-	crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	94.9	1.6e-59
AXO85119.1|3711342_3711633_-	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	94.8	6.7e-48
AXO85120.1|3711625_3711796_-	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	66.0	5.3e-13
AXO85121.1|3711795_3712251_-	hypothetical protein	NA	I6PD71	Cronobacter_phage	66.2	4.5e-59
AXO85122.1|3712247_3712349_-	hypothetical protein	NA	NA	NA	NA	NA
AXO85123.1|3712698_3713742_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXO85124.1|3714091_3715618_-	recombinase family protein	NA	Q3HQV4	Burkholderia_phage	30.8	3.6e-31
AXO85125.1|3715873_3716206_-	multidrug SMR transporter	NA	NA	NA	NA	NA
AXO85126.1|3716273_3716576_-	protein ren	NA	M1FPD5	Enterobacteria_phage	97.8	4.7e-44
AXO85127.1|3716572_3717274_-	Replication protein P	NA	M1FJ72	Enterobacteria_phage	97.4	2.7e-127
AXO85128.1|3717270_3718290_-	Replication protein O	NA	A0A0M5M7Y1	Salmonella_phage	63.8	2.0e-110
AXO85129.1|3718286_3718826_-	regulator	NA	M9NZI6	Enterobacteria_phage	66.7	8.9e-62
AXO85130.1|3718856_3719084_-	transcriptional regulator	NA	Q76H55	Enterobacteria_phage	69.0	3.8e-22
AXO85131.1|3719194_3719887_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	86.1	2.5e-109
AXO85132.1|3719993_3721601_+	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	49.0	6.9e-94
AXO85133.1|3722188_3722395_+	cell division inhibitor protein	NA	K7P6H3	Enterobacteria_phage	85.1	3.5e-27
AXO85134.1|3722470_3722767_+	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	99.0	8.1e-49
AXO85135.1|3722772_3723558_+	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
AXO85136.1|3723554_3724235_+	exonuclease	NA	A0A0P0ZCD4	Stx2-converting_phage	99.1	1.9e-130
AXO86235.1|3724231_3724393_+	DUF1317 family protein	NA	A0A1U8QQC1	Enterobacteria_phage	96.0	7.7e-22
AXO85137.1|3724385_3724943_+	phage N-6-adenine-methyltransferase	NA	E5AGF8	Erwinia_phage	62.9	3.2e-62
AXO85138.1|3724953_3725235_+	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
AXO85139.1|3725333_3725552_+	TraR/DksA family transcriptional regulator	NA	M1FQT7	Enterobacteria_phage	94.4	7.0e-34
AXO85140.1|3725599_3725839_+	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	87.3	5.3e-35
AXO85141.1|3725978_3726215_+	excisionase	NA	NA	NA	NA	NA
3726073:3726088	attL	AAATGATGGCCCCACC	NA	NA	NA	NA
AXO85142.1|3726204_3727347_+|integrase	integrase	integrase	Q77Z02	Phage_21	100.0	3.6e-206
AXO85143.1|3727460_3728711_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	3.8e-23
AXO85144.1|3728882_3729536_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
3729275:3729290	attR	AAATGATGGCCCCACC	NA	NA	NA	NA
AXO85145.1|3729545_3730007_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AXO85146.1|3730060_3731167_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 3
CP031609	Escherichia coli strain S10 chromosome, complete genome	4821441	4463102	4518267	4821441	tRNA,transposase,protease	Bacillus_phage(30.77%)	52	NA	NA
AXO85766.1|4463102_4464128_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AXO85767.1|4464433_4465228_+	hypothetical protein	NA	NA	NA	NA	NA
AXO85768.1|4465137_4465416_+	hypothetical protein	NA	NA	NA	NA	NA
AXO85769.1|4465431_4465911_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AXO85770.1|4465947_4467600_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
AXO85771.1|4467596_4467782_-	hypothetical protein	NA	NA	NA	NA	NA
AXO85772.1|4467817_4469038_+	MFS transporter	NA	NA	NA	NA	NA
AXO85773.1|4469275_4470952_+	Kef family K(+) transporter	NA	NA	NA	NA	NA
AXO85774.1|4471084_4472065_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AXO85775.1|4472328_4473676_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	52.4	1.0e-74
AXO85776.1|4473789_4475094_-	inosine/guanosine kinase	NA	NA	NA	NA	NA
AXO85777.1|4475245_4476205_+	acetyl esterase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	25.4	9.4e-14
AXO85778.1|4476201_4477164_-	ferrochelatase	NA	NA	NA	NA	NA
AXO85779.1|4477295_4477940_-	adenylate kinase	NA	NA	NA	NA	NA
AXO85780.1|4478120_4479995_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	38.0	1.0e-117
AXO85781.1|4480104_4480710_-	recombination protein RecR	NA	NA	NA	NA	NA
AXO85782.1|4480709_4481039_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AXO85783.1|4481091_4483023_-	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	41.5	5.1e-43
AXO85784.1|4483151_4483703_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	47.3	3.7e-31
AXO85785.1|4483770_4483878_-	adenine phosphoribosyltransferase	NA	NA	NA	NA	NA
AXO85786.1|4483855_4484233_-	DUF454 family protein	NA	NA	NA	NA	NA
AXO85787.1|4484302_4484830_+	primosomal replication protein N''	NA	NA	NA	NA	NA
AXO85788.1|4484843_4485008_+	DUF2496 domain-containing protein	NA	NA	NA	NA	NA
AXO85789.1|4485046_4488409_-	mechanosensitive channel MscK	NA	NA	NA	NA	NA
AXO85790.1|4488414_4488606_+	hypothetical protein	NA	NA	NA	NA	NA
AXO85791.1|4488536_4489184_-	transcriptional regulator	NA	NA	NA	NA	NA
AXO85792.1|4489325_4490519_+	MexE family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXO85793.1|4490541_4493691_+	multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.9	4.7e-54
AXO85794.1|4494236_4494611_+	Hha toxicity modulator TomB	NA	NA	NA	NA	NA
AXO85795.1|4494636_4494855_+	hemolysin expression-modulating protein Hha	NA	NA	NA	NA	NA
AXO85796.1|4495026_4495578_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
AXO85797.1|4495693_4496164_+	hypothetical protein	NA	NA	NA	NA	NA
AXO86267.1|4496327_4497878_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AXO85798.1|4497919_4498273_-	DUF1428 family protein	NA	NA	NA	NA	NA
AXO85799.1|4498573_4498963_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA	NA
AXO85800.1|4498993_4499566_-	lipoprotein	NA	NA	NA	NA	NA
AXO85801.1|4499782_4500643_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
AXO85802.1|4500691_4501978_-	ammonia channel	NA	NA	NA	NA	NA
AXO85803.1|4502007_4502346_-	nitrogen regulatory protein P-II 2	NA	NA	NA	NA	NA
AXO85804.1|4502526_4504308_-	SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.9	8.9e-42
AXO85805.1|4504300_4506073_-	SmdA family multidrug ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.1	2.0e-49
AXO85806.1|4506102_4506561_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AXO85807.1|4506713_4507532_-	HMP-PP phosphatase	NA	NA	NA	NA	NA
AXO85808.1|4507631_4509332_+	SgrR family transcriptional regulator	NA	NA	NA	NA	NA
AXO85809.1|4509396_4510092_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	68.0	1.9e-88
AXO85810.1|4510143_4510542_-	long-chain acyl-CoA thioesterase FadM	NA	NA	NA	NA	NA
AXO85811.1|4510635_4511007_-	hypothetical protein	NA	NA	NA	NA	NA
AXO85812.1|4511157_4513029_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AXO85813.1|4513220_4513493_-	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.1e-20
AXO85814.1|4513701_4516056_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	52.4	1.6e-224
AXO85815.1|4516243_4517518_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.4	8.7e-132
AXO85816.1|4517643_4518267_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	63.9	2.9e-64
>prophage 1
CP031610	Escherichia coli strain S10 plasmid pIncAC2-1502318, complete sequence	160292	100078	114758	160292	transposase,integrase	Salmonella_phage(33.33%)	16	95551:95564	116945:116958
95551:95564	attL	ATCCGAGCTGGCGC	NA	NA	NA	NA
AXO86397.1|100078_101083_-|transposase	IS110 family transposase IS4321	transposase	NA	NA	NA	NA
AXO86398.1|101161_104134_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	73.1	0.0e+00
AXO86399.1|104136_104694_-	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	81.3	5.8e-48
AXO86400.1|104731_105055_-|transposase	transposase	transposase	NA	NA	NA	NA
AXO86401.1|104999_106013_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AXO86402.1|106157_106655_+	trimethoprim-resistant dihydrofolate reductase DfrA12	NA	A0A0A0PL85	Bacillus_phage	40.9	7.5e-23
AXO86403.1|106766_107057_+	DUF1010 domain-containing protein	NA	NA	NA	NA	NA
AXO86404.1|107062_107854_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
AXO86405.1|108017_108365_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AXO86406.1|108358_109198_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
AXO86407.1|109602_111144_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
AXO86408.1|111476_112133_+	quinolone resistance pentapeptide repeat protein QnrA1	NA	NA	NA	NA	NA
AXO86409.1|112332_113172_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
AXO86410.1|113101_113281_-	hypothetical protein	NA	NA	NA	NA	NA
AXO86411.1|113299_113572_+	hypothetical protein	NA	NA	NA	NA	NA
AXO86412.1|113753_114758_-|transposase	IS110 family transposase IS4321	transposase	NA	NA	NA	NA
116945:116958	attR	ATCCGAGCTGGCGC	NA	NA	NA	NA
