assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003410375.1_ASM341037v1	CP031003	Lactobacillus curvatus strain TMW 1.1928 chromosome, complete genome	1	926931-928288	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	Type II-A,Type II-C,Type II-B	GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC,GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC,GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	36,36,36	0	0	NA	NA	NA:NA:NA	20,20,20	20	TypeII-A,TypeII-C,TypeII-B	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|101aa|down_6|CP031003.1_935358_935661_+	NA|77aa|up_9|CP031003.1_915787_916018_+	pfam11184, DUF2969, Protein of unknown function (DUF2969)	NA|400aa|up_8|CP031003.1_916111_917311_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|101aa|up_7|CP031003.1_917330_917633_+	cd06848, GCS_H, Glycine cleavage H-protein	NA|345aa|up_6|CP031003.1_918024_919059_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|230aa|up_5|CP031003.1_919051_919741_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|up_4|CP031003.1_919760_920582_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	cas9|1369aa|up_3|CP031003.1_920710_924817_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|up_2|CP031003.1_925047_925953_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|107aa|up_1|CP031003.1_925915_926236_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|224aa|up_0|CP031003.1_926232_926904_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|357aa|down_0|CP031003.1_928337_929407_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|261aa|down_1|CP031003.1_929777_930560_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|434aa|down_2|CP031003.1_930572_931874_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|413aa|down_3|CP031003.1_931854_933093_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|164aa|down_4|CP031003.1_933079_933571_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|468aa|down_5|CP031003.1_933567_934971_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|101aa|down_6|CP031003.1_935358_935661_+	NA	NA|174aa|down_7|CP031003.1_935661_936183_+	pfam02632, BioY, BioY family	NA|277aa|down_8|CP031003.1_936212_937043_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|459aa|down_9|CP031003.1_937280_938657_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]
GCA_003410375.1_ASM341037v1	CP031003	Lactobacillus curvatus strain TMW 1.1928 chromosome, complete genome	2	929530-929631	2	CRISPRCasFinder	no	cas9,cas1,cas2,csn2	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	Type II-A,Type II-C,Type II-B	GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	36	0	0	NA	NA	NA	1	1	TypeII-A,TypeII-C,TypeII-B	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|101aa|down_5|CP031003.1_935358_935661_+	NA|400aa|up_9|CP031003.1_916111_917311_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|101aa|up_8|CP031003.1_917330_917633_+	cd06848, GCS_H, Glycine cleavage H-protein	NA|345aa|up_7|CP031003.1_918024_919059_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|230aa|up_6|CP031003.1_919051_919741_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|up_5|CP031003.1_919760_920582_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	cas9|1369aa|up_4|CP031003.1_920710_924817_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|up_3|CP031003.1_925047_925953_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|107aa|up_2|CP031003.1_925915_926236_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|224aa|up_1|CP031003.1_926232_926904_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|357aa|up_0|CP031003.1_928337_929407_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|261aa|down_0|CP031003.1_929777_930560_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|434aa|down_1|CP031003.1_930572_931874_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|413aa|down_2|CP031003.1_931854_933093_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|164aa|down_3|CP031003.1_933079_933571_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|468aa|down_4|CP031003.1_933567_934971_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|101aa|down_5|CP031003.1_935358_935661_+	NA	NA|174aa|down_6|CP031003.1_935661_936183_+	pfam02632, BioY, BioY family	NA|277aa|down_7|CP031003.1_936212_937043_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|459aa|down_8|CP031003.1_937280_938657_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|269aa|down_9|CP031003.1_938601_939408_+	cd17533, REC_LytTR_AgrA-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AgrA
GCA_003410375.1_ASM341037v1	CP031003	Lactobacillus curvatus strain TMW 1.1928 chromosome, complete genome	3	1314264-1314657	2,3	PILER-CR,CRISPRCasFinder	no	DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	GAATCATCCCCATGTATATGGGGAGCAC,GAATCATCCCCATGTATATGGGGAGCAC	28,28	0	0	NA	NA	NA:NA	6,6	6	TypeI-E	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	NA|114aa|up_7|CP031003.1_1306910_1307252_-,NA|130aa|up_3|CP031003.1_1309679_1310069_-,NA|82aa|up_1|CP031003.1_1310982_1311228_-,NA	NA|150aa|up_9|CP031003.1_1304127_1304577_-	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|744aa|up_8|CP031003.1_1304589_1306821_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|114aa|up_7|CP031003.1_1306910_1307252_-	NA	NA|252aa|up_6|CP031003.1_1307288_1308044_-	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional	NA|316aa|up_5|CP031003.1_1308056_1309004_-	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|169aa|up_4|CP031003.1_1309034_1309541_-	pfam11217, DUF3013, Protein of unknown function (DUF3013)	NA|130aa|up_3|CP031003.1_1309679_1310069_-	NA	NA|169aa|up_2|CP031003.1_1310417_1310924_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|82aa|up_1|CP031003.1_1310982_1311228_-	NA	NA|357aa|up_0|CP031003.1_1312617_1313687_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	DEDDh|301aa|down_0|CP031003.1_1314685_1315588_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|319aa|down_1|CP031003.1_1315584_1316541_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|225aa|down_2|CP031003.1_1316542_1317217_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|240aa|down_3|CP031003.1_1317232_1317952_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|357aa|down_4|CP031003.1_1317932_1319003_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|201aa|down_5|CP031003.1_1319002_1319605_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|571aa|down_6|CP031003.1_1319614_1321327_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|944aa|down_7|CP031003.1_1321329_1324161_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|307aa|down_8|CP031003.1_1326518_1327439_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|145aa|down_9|CP031003.1_1327800_1328235_-	cd07251, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family
GCA_003410375.1_ASM341037v1	CP031003	Lactobacillus curvatus strain TMW 1.1928 chromosome, complete genome	4	1324389-1326185	4,2,3	CRISPRCasFinder,CRT,PILER-CR	no	DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	GAATCATCCCCATATACATGGGGAGTAC,GAATCATCCCCATATACATGGGGAGTAC,GAATCATCCCCATATACATGGGGAGTAC	28,28,28	0	0	NA	NA	NA:NA:NA	29,29,28	29	TypeI-E	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	NA|82aa|up_9|CP031003.1_1310982_1311228_-,NA|120aa|down_2|CP031003.1_1328398_1328758_+,NA|138aa|down_3|CP031003.1_1328846_1329260_+,NA|63aa|down_4|CP031003.1_1329256_1329445_-	NA|82aa|up_9|CP031003.1_1310982_1311228_-	NA	NA|357aa|up_8|CP031003.1_1312617_1313687_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	DEDDh|301aa|up_7|CP031003.1_1314685_1315588_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|319aa|up_6|CP031003.1_1315584_1316541_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|225aa|up_5|CP031003.1_1316542_1317217_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|240aa|up_4|CP031003.1_1317232_1317952_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|357aa|up_3|CP031003.1_1317932_1319003_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|201aa|up_2|CP031003.1_1319002_1319605_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|571aa|up_1|CP031003.1_1319614_1321327_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|944aa|up_0|CP031003.1_1321329_1324161_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|307aa|down_0|CP031003.1_1326518_1327439_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|145aa|down_1|CP031003.1_1327800_1328235_-	cd07251, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|120aa|down_2|CP031003.1_1328398_1328758_+	NA	NA|138aa|down_3|CP031003.1_1328846_1329260_+	NA	NA|63aa|down_4|CP031003.1_1329256_1329445_-	NA	NA|116aa|down_5|CP031003.1_1329519_1329867_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|247aa|down_6|CP031003.1_1329987_1330728_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|177aa|down_7|CP031003.1_1330717_1331248_-	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|81aa|down_8|CP031003.1_1331314_1331557_-	COG1837, COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only]	NA|92aa|down_9|CP031003.1_1331566_1331842_-	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed
GCA_003410375.1_ASM341037v1	CP031003	Lactobacillus curvatus strain TMW 1.1928 chromosome, complete genome	5	1970256-1970328	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TTAATTTTACAATCTACCATAAA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,cas6e,cas5,cas7,cse2gr11,cas8e	NA|424aa|up_7|CP031003.1_1957969_1959241_+,NA|436aa|up_6|CP031003.1_1959583_1960891_-,NA	NA|258aa|up_9|CP031003.1_1956097_1956871_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|288aa|up_8|CP031003.1_1957087_1957951_+	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam)	NA|424aa|up_7|CP031003.1_1957969_1959241_+	NA	NA|436aa|up_6|CP031003.1_1959583_1960891_-	NA	NA|518aa|up_5|CP031003.1_1961089_1962643_-	PRK00074, guaA, GMP synthase; Reviewed	NA|310aa|up_4|CP031003.1_1962804_1963734_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|357aa|up_3|CP031003.1_1964286_1965356_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|756aa|up_2|CP031003.1_1965496_1967764_-	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	NA|197aa|up_1|CP031003.1_1968173_1968764_-	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|310aa|up_0|CP031003.1_1969244_1970174_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|156aa|down_0|CP031003.1_1970453_1970921_+	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|176aa|down_1|CP031003.1_1971265_1971793_-	pfam08279, HTH_11, HTH domain	NA|357aa|down_2|CP031003.1_1972257_1973327_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|567aa|down_3|CP031003.1_1973316_1975017_-	COG5617, COG5617, Predicted integral membrane protein [Function unknown]	NA|307aa|down_4|CP031003.1_1975313_1976234_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|764aa|down_5|CP031003.1_1976430_1978722_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|117aa|down_6|CP031003.1_1979020_1979371_-	PRK14220, PRK14220, fluoride efflux transporter CrcB	NA|136aa|down_7|CP031003.1_1979370_1979778_-	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB)	NA|301aa|down_8|CP031003.1_1981970_1982873_+	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|155aa|down_9|CP031003.1_1982923_1983388_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein
