assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003429305.1_ASM342930v1	CP031759	Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete sequence	1	230261-230360	1	CRISPRCasFinder	no		cas3,DEDDh,WYL,DinG,csx1,RT,csa3	Orphan	GTAGCAGCGATTTTATATCGCGACC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,WYL,DinG,csx1,RT,csa3	NA,NA	NA|74aa|up_9|CP031759.1_219033_219255_+	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]	NA|71aa|up_8|CP031759.1_219275_219488_-	pfam04102, SlyX, SlyX	NA|338aa|up_7|CP031759.1_219484_220498_-	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|288aa|up_6|CP031759.1_220655_221519_+	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|157aa|up_5|CP031759.1_221595_222066_-	PRK11718, PRK11718, sigma D regulator	NA|355aa|up_4|CP031759.1_222534_223599_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|616aa|up_3|CP031759.1_223677_225525_-	cd09599, M1_LTA4H, Peptidase M1 family including Leukotriene A4 hydrolase catalytic domain	NA|340aa|up_2|CP031759.1_225705_226725_+	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase	NA|331aa|up_1|CP031759.1_226711_227704_+	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|395aa|up_0|CP031759.1_229070_230255_+	PRK00049, PRK00049, elongation factor Tu; Reviewed	NA|339aa|down_0|CP031759.1_230595_231612_+	pfam16868, NMT1_3, NMT1-like family	NA|698aa|down_1|CP031759.1_231648_233742_+	TIGR02123, conserved_inner_membrane_protein, TRAP transporter, 4TM/12TM fusion protein	NA|104aa|down_2|CP031759.1_236694_237006_+	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed	NA|201aa|down_3|CP031759.1_237685_238288_+	PRK05319, rplD, 50S ribosomal protein L4; Provisional	NA|101aa|down_4|CP031759.1_238284_238587_+	PRK05738, rplW, 50S ribosomal protein L23; Reviewed	NA|275aa|down_5|CP031759.1_238604_239429_+	PRK09374, rplB, 50S ribosomal protein L2; Validated	NA|93aa|down_6|CP031759.1_239445_239724_+	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed	NA|111aa|down_7|CP031759.1_239736_240069_+	PRK00565, rplV, 50S ribosomal protein L22; Reviewed	NA|234aa|down_8|CP031759.1_240081_240783_+	PRK00310, rpsC, 30S ribosomal protein S3; Reviewed	NA|138aa|down_9|CP031759.1_240796_241210_+	PRK09203, rplP, 50S ribosomal protein L16; Reviewed
GCA_003429305.1_ASM342930v1	CP031759	Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete sequence	2	713552-713890	1	PILER-CR	no		cas3,DEDDh,WYL,DinG,csx1,RT,csa3	Orphan	TGGTGGGTTGTACTGGACTTAAACCAGTGACCCTCGCCTTG	41	1	2	713686-713756|713686-713756	CP031759.1_713145-713215|CP031759.1_713257-713327	NA	3	3	Orphan	cas3,DEDDh,WYL,DinG,csx1,RT,csa3	NA|99aa|up_7|CP031759.1_702655_702952_-,NA	NA|336aa|up_9|CP031759.1_701057_702065_+	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|146aa|up_8|CP031759.1_702161_702599_+	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|99aa|up_7|CP031759.1_702655_702952_-	NA	NA|254aa|up_6|CP031759.1_703052_703814_+	cd18109, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH	NA|1130aa|up_5|CP031759.1_703878_707268_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|242aa|up_4|CP031759.1_707286_708012_+	pfam04354, ZipA_C, ZipA, C-terminal FtsZ-binding domain	NA|673aa|up_3|CP031759.1_708077_710096_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|171aa|up_2|CP031759.1_710100_710613_+	pfam11143, DUF2919, Protein of unknown function (DUF2919)	NA|147aa|up_1|CP031759.1_710614_711055_+	pfam01641, SelR, SelR domain	NA|544aa|up_0|CP031759.1_711078_712710_-	cd17589, REC_TPR, phosphoacceptor receiver (REC) domain of uncharacterized tetratricopeptide repeat (TPR)-containing response regulators	NA|530aa|down_0|CP031759.1_716181_717771_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|307aa|down_1|CP031759.1_717875_718796_-	PRK13674, PRK13674, GTP cyclohydrolase I FolE2	NA|774aa|down_2|CP031759.1_719117_721439_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|240aa|down_3|CP031759.1_721445_722165_-	PRK11173, PRK11173, two-component response regulator; Provisional	NA|174aa|down_4|CP031759.1_722272_722794_-	pfam13689, DUF4154, Domain of unknown function (DUF4154)	NA|541aa|down_5|CP031759.1_722790_724413_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|343aa|down_6|CP031759.1_724577_725606_-	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA|242aa|down_7|CP031759.1_725691_726417_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|91aa|down_8|CP031759.1_727687_727960_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|324aa|down_9|CP031759.1_728024_728996_-	PRK10888, PRK10888, octaprenyl diphosphate synthase; Provisional
GCA_003429305.1_ASM342930v1	CP031759	Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete sequence	3	2483083-2483194	2	CRISPRCasFinder	no		cas3,DEDDh,WYL,DinG,csx1,RT,csa3	Orphan	TCGGAGTAGGAGCTGCTTTACGCAGCGATCT	31	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,WYL,DinG,csx1,RT,csa3	NA|76aa|up_6|CP031759.1_2476436_2476664_-,NA|144aa|up_0|CP031759.1_2482132_2482564_-,NA|176aa|down_4|CP031759.1_2488539_2489067_-,NA|177aa|down_5|CP031759.1_2489137_2489668_-,NA|77aa|down_8|CP031759.1_2493726_2493957_+	NA|658aa|up_9|CP031759.1_2472898_2474872_-	PRK11054, helD, DNA helicase IV; Provisional	NA|177aa|up_8|CP031759.1_2475584_2476115_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|104aa|up_7|CP031759.1_2476104_2476416_-	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown]	NA|76aa|up_6|CP031759.1_2476436_2476664_-	NA	NA|293aa|up_5|CP031759.1_2477050_2477929_-	PRK13362, PRK13362, protoheme IX farnesyltransferase; Provisional	NA|120aa|up_4|CP031759.1_2477942_2478302_-	TIGR02847, Cytochrome_bo3_ubiquinol_oxidase_subunit_4, cytochrome o ubiquinol oxidase subunit IV	NA|207aa|up_3|CP031759.1_2478301_2478922_-	TIGR02842, Cytochrome_bo3_ubiquinol_oxidase_subunit_3, cytochrome o ubiquinol oxidase, subunit III	NA|661aa|up_2|CP031759.1_2478925_2480908_-	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I	NA|303aa|up_1|CP031759.1_2480910_2481819_-	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional	NA|144aa|up_0|CP031759.1_2482132_2482564_-	NA	NA|152aa|down_0|CP031759.1_2483240_2483696_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|169aa|down_1|CP031759.1_2483777_2484284_+	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator	NA|595aa|down_2|CP031759.1_2484297_2486082_+	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)	NA|720aa|down_3|CP031759.1_2486228_2488388_-	pfam10459, Peptidase_S46, Peptidase S46	NA|176aa|down_4|CP031759.1_2488539_2489067_-	NA	NA|177aa|down_5|CP031759.1_2489137_2489668_-	NA	NA|689aa|down_6|CP031759.1_2489664_2491731_-	pfam09994, DUF2235, Uncharacterized alpha/beta hydrolase domain (DUF2235)	NA|532aa|down_7|CP031759.1_2491978_2493574_+	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|77aa|down_8|CP031759.1_2493726_2493957_+	NA	NA|254aa|down_9|CP031759.1_2494082_2494844_-	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E
