assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003429445.1_ASM342944v1	CP023470	Salmonella enterica subsp. enterica strain BAA-1672 chromosome, complete genome	1	2294590-2294680	1	CRISPRCasFinder	no		c2c9_V-U4,cas3,DEDDh,DinG,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	CGTCGCCATCCGGCAGTCACAAAACAGTACCCG	33	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DEDDh,DinG,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,cas14j	NA|74aa|up_0|CP023470.1_2294294_2294516_+,NA|36aa|down_5|CP023470.1_2300361_2300469_-	NA|265aa|up_9|CP023470.1_2283540_2284335_+	COG3735, COG3735, Uncharacterized protein conserved in bacteria [Function unknown]	NA|160aa|up_8|CP023470.1_2284536_2285016_+	PRK10670, PRK10670, Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA|551aa|up_7|CP023470.1_2285132_2286785_-	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed	NA|407aa|up_6|CP023470.1_2286956_2288177_+	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters	NA|559aa|up_5|CP023470.1_2288391_2290068_+	PRK10669, PRK10669, putative cation:proton antiport protein; Provisional	NA|435aa|up_4|CP023470.1_2290116_2291421_-	PRK15074, PRK15074, inosine/guanosine kinase; Provisional	NA|324aa|up_3|CP023470.1_2291573_2292545_+	PRK10162, PRK10162, acetyl esterase	NA|321aa|up_2|CP023470.1_2292541_2293504_-	PRK00035, hemH, ferrochelatase; Reviewed	NA|215aa|up_1|CP023470.1_2293733_2294378_-	PRK00279, adk, adenylate kinase; Reviewed	NA|74aa|up_0|CP023470.1_2294294_2294516_+	NA	NA|625aa|down_0|CP023470.1_2294735_2296610_-	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|202aa|down_1|CP023470.1_2296720_2297326_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|110aa|down_2|CP023470.1_2297325_2297655_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|643aa|down_3|CP023470.1_2297700_2299629_-	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|184aa|down_4|CP023470.1_2299742_2300294_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|36aa|down_5|CP023470.1_2300361_2300469_-	NA	NA|126aa|down_6|CP023470.1_2300446_2300824_-	PRK10527, PRK10527, DUF454 family protein	NA|172aa|down_7|CP023470.1_2300904_2301420_+	PRK10093, PRK10093, primosomal replication protein N''; Provisional	NA|56aa|down_8|CP023470.1_2301433_2301601_+	PRK11038, PRK11038, hypothetical protein; Provisional	NA|308aa|down_9|CP023470.1_2301670_2302594_+	pfam04754, Transposase_31, Putative transposase, YhgA-like
GCA_003429445.1_ASM342944v1	CP023470	Salmonella enterica subsp. enterica strain BAA-1672 chromosome, complete genome	2	2783332-2783544	1,2,1	CRT,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	c2c9_V-U4,cas3,DEDDh,DinG,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,GTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACACC	29,27,30	0	0	NA	NA	I-E:I-E:I-E	3,3,2	3	TypeI-E	c2c9_V-U4,cas3,DEDDh,DinG,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,cas14j	NA,NA	NA|209aa|up_9|CP023470.1_2774578_2775205_-	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|254aa|up_8|CP023470.1_2775198_2775960_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_7|CP023470.1_2775940_2776990_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_6|CP023470.1_2776986_2777466_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_5|CP023470.1_2777465_2778176_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_4|CP023470.1_2778194_2778506_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|119aa|up_3|CP023470.1_2778696_2779053_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_2|CP023470.1_2779070_2779676_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_1|CP023470.1_2779662_2781102_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_0|CP023470.1_2781111_2782020_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	cas2|98aa|down_0|CP023470.1_2783627_2783921_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|down_1|CP023470.1_2783950_2784841_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|235aa|down_2|CP023470.1_2784840_2785545_-	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|242aa|down_3|CP023470.1_2785544_2786270_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|355aa|down_4|CP023470.1_2786279_2787344_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|201aa|down_5|CP023470.1_2787360_2787963_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|512aa|down_6|CP023470.1_2787979_2789515_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|CP023470.1_2789872_2792572_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|318aa|down_8|CP023470.1_2792951_2793905_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_9|CP023470.1_2793992_2794727_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
