The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028347	Novosphingobium sp. THN1 chromosome, complete genome	3487514	2599648	2626303	3487514	terminase,head	Aeromonas_phage(26.32%)	33	NA	NA
AXU20691.1|2599648_2600230_-	glycoside hydrolase	NA	A0A2H4JDB4	uncultured_Caudovirales_phage	46.7	8.7e-39
AXU19701.1|2600259_2600649_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19702.1|2600650_2601328_-	hypothetical protein	NA	Q6UIZ8	Burkholderia_virus	44.9	8.1e-20
AXU20692.1|2601327_2601909_-	DUF2612 domain-containing protein	NA	K4HYS2	Acinetobacter_phage	38.1	6.5e-26
AXU19703.1|2601956_2603165_-	hypothetical protein	NA	H9C0X9	Aeromonas_phage	42.5	1.3e-73
AXU19704.1|2603161_2603500_-	hypothetical protein	NA	A0A2R3UAP1	Myoviridae_environmental_samples	42.7	7.9e-16
AXU19705.1|2604178_2605048_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19706.1|2605044_2605335_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19707.1|2605331_2605946_-	hypothetical protein	NA	E2GM21	Acinetobacter_phage	31.6	1.7e-16
AXU19708.1|2605945_2606362_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19709.1|2606334_2607384_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19710.1|2607416_2607551_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
AXU19711.1|2608067_2608511_-	hypothetical protein	NA	H9C0W6	Aeromonas_phage	39.2	2.7e-24
AXU19712.1|2608523_2610014_-	hypothetical protein	NA	A0A077KGV4	Edwardsiella_phage	38.1	3.1e-72
AXU19713.1|2610007_2610565_-	hypothetical protein	NA	A6N3B1	Burkholderia_virus	35.1	3.8e-07
AXU19714.1|2610531_2610939_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19715.1|2611141_2611588_-	hypothetical protein	NA	A0A077KC03	Edwardsiella_phage	42.7	5.2e-15
AXU19716.1|2611610_2612093_-	DUF4054 domain-containing protein	NA	H9C0W0	Aeromonas_phage	53.5	2.6e-20
AXU19717.1|2612097_2612496_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19718.1|2612523_2613627_-	DUF2184 domain-containing protein	NA	A0A219YBB0	Aeromonas_phage	44.3	1.2e-73
AXU19719.1|2613633_2614323_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19720.1|2614327_2615596_-	hypothetical protein	NA	A0A219YCD3	Aeromonas_phage	34.7	6.8e-52
AXU19721.1|2615750_2616728_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19722.1|2616739_2619130_-	hypothetical protein	NA	Q4ZC48	Staphylococcus_virus	22.7	5.1e-08
AXU20693.1|2619172_2619877_-|head	phage head morphogenesis protein	head	A0A077KGU5	Edwardsiella_phage	47.1	2.1e-39
AXU19723.1|2619951_2621478_-	hypothetical protein	NA	A0A2R3UAL5	Myoviridae_environmental_samples	44.4	3.1e-104
AXU19724.1|2621544_2621727_+	hypothetical protein	NA	NA	NA	NA	NA
AXU19725.1|2621723_2623190_-|terminase	PBSX family phage terminase large subunit	terminase	A0A173H0R0	Pseudoalteromonas_phage	50.3	4.5e-132
AXU19726.1|2623186_2623711_-|terminase	terminase small subunit	terminase	A0A2I7RB14	Vibrio_phage	50.7	2.5e-32
AXU19727.1|2623707_2623959_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19728.1|2623961_2624555_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19729.1|2624539_2624791_-	hypothetical protein	NA	NA	NA	NA	NA
AXU19730.1|2625100_2626303_-	hypothetical protein	NA	A0A2D1GN57	Marinobacter_phage	33.8	4.4e-53
>prophage 2
CP028347	Novosphingobium sp. THN1 chromosome, complete genome	3487514	2634936	2640685	3487514		Sinorhizobium_phage(16.67%)	9	NA	NA
AXU19743.1|2634936_2636079_+	hypothetical protein	NA	A0A076G8D7	Sinorhizobium_phage	36.4	7.5e-18
AXU19744.1|2636081_2636846_+	YqaJ-like viral recombinase	NA	A0A2L0HJW4	Mycobacterium_phage	40.9	7.2e-49
AXU19745.1|2636842_2637538_+	hypothetical protein	NA	A0A1P8VVD8	Erythrobacter_phage	48.7	3.5e-58
AXU19746.1|2637552_2638194_+	hypothetical protein	NA	G9FH01	Rhodococcus_phage	41.3	8.7e-32
AXU19747.1|2638195_2638405_+	hypothetical protein	NA	NA	NA	NA	NA
AXU19748.1|2638555_2638894_+	hypothetical protein	NA	NA	NA	NA	NA
AXU19749.1|2638905_2639823_+	hypothetical protein	NA	A0A0A8IL76	Aurantimonas_phage	36.7	8.1e-39
AXU19750.1|2640209_2640446_+	hypothetical protein	NA	NA	NA	NA	NA
AXU19751.1|2640442_2640685_+	hypothetical protein	NA	A0A1V0E8D1	Vibrio_phage	57.9	2.1e-07
>prophage 3
CP028347	Novosphingobium sp. THN1 chromosome, complete genome	3487514	3472060	3480068	3487514		Burkholderia_virus(14.29%)	13	NA	NA
AXU20372.1|3472060_3473296_-	hypothetical protein	NA	C5IHJ8	Burkholderia_virus	37.4	1.6e-34
AXU20373.1|3473299_3473500_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20374.1|3473554_3474400_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20375.1|3474432_3474837_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20376.1|3475231_3475594_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20377.1|3475596_3476085_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20378.1|3476165_3476780_-	hypothetical protein	NA	A0A139ZPI6	Marinitoga_camini_virus	29.7	4.2e-07
AXU20379.1|3476871_3477126_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20769.1|3477204_3477423_+	hypothetical protein	NA	A0A1X9HVT2	Ruegeria_phage	53.3	7.3e-07
AXU20380.1|3477392_3477527_+	hypothetical protein	NA	A0A2I7R7I1	Vibrio_phage	68.8	7.1e-05
AXU20381.1|3477625_3478990_+	hypothetical protein	NA	R9TSA8	Rhizobium_phage	35.8	7.3e-44
AXU20382.1|3478992_3479454_+	hypothetical protein	NA	A0A240F4S6	Ochrobactrum_phage	49.6	2.2e-24
AXU20770.1|3479477_3480068_+	methyltransferase	NA	A0A076GD02	Sinorhizobium_phage	60.8	2.0e-62
>prophage 1
CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1161559	26083	99104	1161559	transposase,integrase	Bacillus_phage(23.08%)	50	26413:26428	35120:35135
AXU20790.1|26083_26918_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
26413:26428	attL	GCCTCGCCCAGCGCCG	NA	NA	NA	NA
AXU20791.1|27689_28070_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20792.1|28486_28759_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20793.1|29337_30570_+|integrase	integrase	integrase	A0A221SAN4	Ralstonia_phage	32.4	6.8e-41
AXU20794.1|30566_31112_+	hypothetical protein	NA	A0A221SAN4	Ralstonia_phage	36.7	2.7e-13
AXU20795.1|31606_31924_+	transcriptional regulator	NA	NA	NA	NA	NA
AXU21560.1|33208_33700_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AXU20796.1|36476_38039_+	RNA-binding protein	NA	A0A1J0GW83	Streptomyces_phage	21.3	2.5e-11
35120:35135	attR	CGGCGCTGGGCGAGGC	NA	NA	NA	NA
AXU20797.1|38824_40051_+	RNA-splicing ligase RtcB	NA	A0A191ZBU8	Erwinia_phage	61.3	2.3e-142
AXU20798.1|40201_40537_-	hypothetical protein	NA	NA	NA	NA	NA
AXU21561.1|41874_42243_+	single-stranded DNA-binding protein	NA	A0A1W6DXL3	Salmonella_phage	40.6	1.1e-15
AXU20799.1|42610_44350_-	hypothetical protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	23.7	2.9e-13
AXU20800.1|45136_45355_-	hypothetical protein	NA	NA	NA	NA	NA
AXU21562.1|45464_46043_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20801.1|46110_46734_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20802.1|46742_48746_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20803.1|49097_49571_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20804.1|49803_50214_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20805.1|50180_52760_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	34.1	1.2e-18
AXU21563.1|54078_55074_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.9	2.6e-14
AXU20806.1|56102_56459_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
AXU20807.1|57670_58609_+	nucleotidyltransferase	NA	NA	NA	NA	NA
AXU20808.1|58697_59600_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	47.7	5.8e-66
AXU20809.1|61140_61635_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20810.1|61712_62252_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20811.1|62353_63244_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20812.1|64545_67161_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20813.1|67448_67736_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20814.1|67737_68706_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20815.1|68940_70377_+	sugar transferase	NA	NA	NA	NA	NA
AXU20816.1|70529_70925_-	hypothetical protein	NA	H7BW61	unidentified_phage	36.6	2.6e-10
AXU20817.1|71358_71820_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20818.1|72239_73064_-	AAA family ATPase	NA	U5N3V8	Enterobacteria_phage	42.2	3.0e-45
AXU21564.1|73060_74428_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
AXU20819.1|74439_74772_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20820.1|76166_77522_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
AXU20821.1|78265_79630_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20822.1|79645_81295_-	GMC oxidoreductase	NA	NA	NA	NA	NA
AXU20823.1|81528_82092_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20824.1|82630_83974_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20825.1|84182_85196_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20826.1|85251_86133_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20827.1|86158_86644_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20828.1|86640_87096_-	oligosaccharide biosynthesis protein Alg14	NA	NA	NA	NA	NA
AXU20829.1|87098_88196_-	oxidoreductase	NA	NA	NA	NA	NA
AXU20830.1|90750_92943_-	hypothetical protein	NA	A0A2H4JA46	uncultured_Caudovirales_phage	29.6	5.0e-18
AXU20831.1|93079_93796_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20832.1|93882_94074_-	hypothetical protein	NA	NA	NA	NA	NA
AXU21565.1|96393_97496_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	27.0	1.9e-10
AXU21566.1|98084_99104_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1161559	183112	247733	1161559	transposase	Shigella_phage(22.22%)	49	NA	NA
AXU20892.1|183112_184260_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	47.1	4.1e-64
AXU20893.1|184276_187183_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20894.1|187110_188319_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20895.1|188210_188717_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20896.1|190418_191813_-	transporter	NA	NA	NA	NA	NA
AXU20897.1|194897_195953_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20898.1|196033_196633_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXU20899.1|196726_196966_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20900.1|197182_198190_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AXU20901.1|199533_200007_+	carbon monoxide dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	35.9	8.7e-13
AXU20902.1|200003_202376_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AXU20903.1|203189_203771_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AXU20904.1|203816_205064_-	MFS transporter	NA	NA	NA	NA	NA
AXU20905.1|205045_205699_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20906.1|205735_206848_-	12-oxophytodienoate reductase	NA	NA	NA	NA	NA
AXU20907.1|207093_208446_+	amidohydrolase family protein	NA	NA	NA	NA	NA
AXU20908.1|208195_209587_+	cytochrome P450	NA	NA	NA	NA	NA
AXU20909.1|209586_210669_+	cytochrome P450	NA	NA	NA	NA	NA
AXU20910.1|210793_211546_+	hypothetical protein	NA	Q06VL0	Trichoplusia_ni_ascovirus	27.2	8.7e-07
AXU20911.1|211538_212291_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20912.1|212346_213099_+	short-chain dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.6	8.2e-13
AXU20913.1|213118_214108_-	amidohydrolase	NA	NA	NA	NA	NA
AXU20914.1|214109_214877_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20915.1|214880_215333_-	limonene-1,2-epoxide hydrolase	NA	NA	NA	NA	NA
AXU20916.1|215416_215803_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20917.1|215862_216195_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20918.1|216355_216943_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20919.1|216899_218183_-	branched-chain alpha-keto acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
AXU20920.1|219214_220447_-	3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha	NA	NA	NA	NA	NA
AXU20921.1|220650_221106_+	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AXU20922.1|221250_223527_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20923.1|223844_226277_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20924.1|226276_228337_+	dehydrogenase	NA	A0A0M4JT37	Mollivirus	29.7	6.5e-44
AXU20925.1|228415_229168_-	short chain dehydrogenase	NA	A0A0M4JSW6	Mollivirus	29.4	4.8e-13
AXU20926.1|229313_229931_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20927.1|233942_235090_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	47.1	4.1e-64
AXU20928.1|235404_236241_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXU20929.1|236205_236388_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20930.1|236861_237314_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AXU20931.1|237310_237667_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AXU20932.1|237698_239219_+|transposase	transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	39.2	2.2e-97
AXU20933.1|239300_240542_-	hypothetical protein	NA	NA	NA	NA	NA
AXU20934.1|240642_241638_-	membrane dipeptidase	NA	NA	NA	NA	NA
AXU20935.1|242020_242383_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20936.1|243251_243935_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20937.1|243958_244525_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20938.1|244558_246286_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20939.1|246416_246620_+	hypothetical protein	NA	NA	NA	NA	NA
AXU20940.1|246667_247733_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	37.2	3.1e-34
