assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	1	125822-125911	1	CRISPRCasFinder	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	TGTGCGTTAGCACTTTAAGCAACAGAAT	28	1	2	125850-125883|125850-125883	CP016106.1_3016681-3016648|CP016106.1_3974629-3974596	NA	1	1	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA,NA|226aa|down_7|CP016106.1_158135_158813_+	NA|208aa|up_9|CP016106.1_116263_116887_+	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|316aa|up_8|CP016106.1_116964_117912_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|114aa|up_7|CP016106.1_117932_118274_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|278aa|up_6|CP016106.1_118393_119227_+	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase	NA|289aa|up_5|CP016106.1_119214_120081_+	PRK13637, cbiO, energy-coupling factor transporter ATPase	NA|268aa|up_4|CP016106.1_120074_120878_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|244aa|up_3|CP016106.1_120909_121641_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|144aa|up_2|CP016106.1_121760_122192_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|131aa|up_1|CP016106.1_122220_122613_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|251aa|up_0|CP016106.1_123071_123824_+	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD	NA|395aa|down_0|CP016106.1_136292_137477_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|784aa|down_1|CP016106.1_137849_140201_+	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|180aa|down_2|CP016106.1_140222_140762_+	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|280aa|down_3|CP016106.1_153821_154661_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|394aa|down_4|CP016106.1_154657_155839_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|301aa|down_5|CP016106.1_156142_157045_+	PRK05805, PRK05805, phosphate butyryltransferase; Validated	NA|360aa|down_6|CP016106.1_157066_158146_+	PRK03011, PRK03011, butyrate kinase; Provisional	NA|226aa|down_7|CP016106.1_158135_158813_+	NA	NA|72aa|down_8|CP016106.1_158855_159071_+	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]	NA|360aa|down_9|CP016106.1_159099_160179_+	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	2	132707-132791	2	CRISPRCasFinder	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	TGTGTGTTAGCACTTTAAGCAAC	23	1	2	132730-132768|132730-132768	CP016106.1_3016686-3016648|CP016106.1_3974634-3974596	NA	1	1	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA,NA|226aa|down_7|CP016106.1_158135_158813_+	NA|208aa|up_9|CP016106.1_116263_116887_+	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|316aa|up_8|CP016106.1_116964_117912_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|114aa|up_7|CP016106.1_117932_118274_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|278aa|up_6|CP016106.1_118393_119227_+	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase	NA|289aa|up_5|CP016106.1_119214_120081_+	PRK13637, cbiO, energy-coupling factor transporter ATPase	NA|268aa|up_4|CP016106.1_120074_120878_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|244aa|up_3|CP016106.1_120909_121641_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|144aa|up_2|CP016106.1_121760_122192_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|131aa|up_1|CP016106.1_122220_122613_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|251aa|up_0|CP016106.1_123071_123824_+	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD	NA|395aa|down_0|CP016106.1_136292_137477_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|784aa|down_1|CP016106.1_137849_140201_+	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|180aa|down_2|CP016106.1_140222_140762_+	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|280aa|down_3|CP016106.1_153821_154661_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|394aa|down_4|CP016106.1_154657_155839_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|301aa|down_5|CP016106.1_156142_157045_+	PRK05805, PRK05805, phosphate butyryltransferase; Validated	NA|360aa|down_6|CP016106.1_157066_158146_+	PRK03011, PRK03011, butyrate kinase; Provisional	NA|226aa|down_7|CP016106.1_158135_158813_+	NA	NA|72aa|down_8|CP016106.1_158855_159071_+	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]	NA|360aa|down_9|CP016106.1_159099_160179_+	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	3	141242-141320	3	CRISPRCasFinder	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	TGTTTATAATGTGGATAATATTTAA	25	0	0	NA	NA	NA	1	1	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA,NA|226aa|down_4|CP016106.1_158135_158813_+	NA|278aa|up_9|CP016106.1_118393_119227_+	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase	NA|289aa|up_8|CP016106.1_119214_120081_+	PRK13637, cbiO, energy-coupling factor transporter ATPase	NA|268aa|up_7|CP016106.1_120074_120878_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|244aa|up_6|CP016106.1_120909_121641_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|144aa|up_5|CP016106.1_121760_122192_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|131aa|up_4|CP016106.1_122220_122613_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|251aa|up_3|CP016106.1_123071_123824_+	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD	NA|395aa|up_2|CP016106.1_136292_137477_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|784aa|up_1|CP016106.1_137849_140201_+	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|180aa|up_0|CP016106.1_140222_140762_+	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|280aa|down_0|CP016106.1_153821_154661_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|394aa|down_1|CP016106.1_154657_155839_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|301aa|down_2|CP016106.1_156142_157045_+	PRK05805, PRK05805, phosphate butyryltransferase; Validated	NA|360aa|down_3|CP016106.1_157066_158146_+	PRK03011, PRK03011, butyrate kinase; Provisional	NA|226aa|down_4|CP016106.1_158135_158813_+	NA	NA|72aa|down_5|CP016106.1_158855_159071_+	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]	NA|360aa|down_6|CP016106.1_159099_160179_+	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated	NA|251aa|down_7|CP016106.1_160178_160931_+	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	NA|186aa|down_8|CP016106.1_160931_161489_+	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase	NA|449aa|down_9|CP016106.1_161658_163005_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4	143254-143343	4	CRISPRCasFinder	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	TGTGCGTTAGCACTTTAAGCAACAGAAT	28	1	2	143282-143315|143282-143315	CP016106.1_3016681-3016648|CP016106.1_3974629-3974596	NA	1	1	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA,NA|226aa|down_4|CP016106.1_158135_158813_+	NA|278aa|up_9|CP016106.1_118393_119227_+	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase	NA|289aa|up_8|CP016106.1_119214_120081_+	PRK13637, cbiO, energy-coupling factor transporter ATPase	NA|268aa|up_7|CP016106.1_120074_120878_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|244aa|up_6|CP016106.1_120909_121641_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|144aa|up_5|CP016106.1_121760_122192_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|131aa|up_4|CP016106.1_122220_122613_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|251aa|up_3|CP016106.1_123071_123824_+	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD	NA|395aa|up_2|CP016106.1_136292_137477_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|784aa|up_1|CP016106.1_137849_140201_+	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|180aa|up_0|CP016106.1_140222_140762_+	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|280aa|down_0|CP016106.1_153821_154661_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|394aa|down_1|CP016106.1_154657_155839_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|301aa|down_2|CP016106.1_156142_157045_+	PRK05805, PRK05805, phosphate butyryltransferase; Validated	NA|360aa|down_3|CP016106.1_157066_158146_+	PRK03011, PRK03011, butyrate kinase; Provisional	NA|226aa|down_4|CP016106.1_158135_158813_+	NA	NA|72aa|down_5|CP016106.1_158855_159071_+	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]	NA|360aa|down_6|CP016106.1_159099_160179_+	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated	NA|251aa|down_7|CP016106.1_160178_160931_+	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	NA|186aa|down_8|CP016106.1_160931_161489_+	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase	NA|449aa|down_9|CP016106.1_161658_163005_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	5	148709-148793	5	CRISPRCasFinder	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	TGTGTGTTAGCACTTTAAGCAAC	23	1	2	148732-148770|148732-148770	CP016106.1_3016686-3016648|CP016106.1_3974634-3974596	NA	1	1	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA,NA|226aa|down_4|CP016106.1_158135_158813_+	NA|278aa|up_9|CP016106.1_118393_119227_+	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase	NA|289aa|up_8|CP016106.1_119214_120081_+	PRK13637, cbiO, energy-coupling factor transporter ATPase	NA|268aa|up_7|CP016106.1_120074_120878_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|244aa|up_6|CP016106.1_120909_121641_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|144aa|up_5|CP016106.1_121760_122192_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|131aa|up_4|CP016106.1_122220_122613_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|251aa|up_3|CP016106.1_123071_123824_+	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD	NA|395aa|up_2|CP016106.1_136292_137477_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|784aa|up_1|CP016106.1_137849_140201_+	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|180aa|up_0|CP016106.1_140222_140762_+	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|280aa|down_0|CP016106.1_153821_154661_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|394aa|down_1|CP016106.1_154657_155839_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|301aa|down_2|CP016106.1_156142_157045_+	PRK05805, PRK05805, phosphate butyryltransferase; Validated	NA|360aa|down_3|CP016106.1_157066_158146_+	PRK03011, PRK03011, butyrate kinase; Provisional	NA|226aa|down_4|CP016106.1_158135_158813_+	NA	NA|72aa|down_5|CP016106.1_158855_159071_+	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]	NA|360aa|down_6|CP016106.1_159099_160179_+	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated	NA|251aa|down_7|CP016106.1_160178_160931_+	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	NA|186aa|down_8|CP016106.1_160931_161489_+	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase	NA|449aa|down_9|CP016106.1_161658_163005_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	7	1267432-1268313	1,7,1	PILER-CR,CRISPRCasFinder,CRT	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	GTTTTATATTAACTAAGTGGTATGTAAAG,GTTTTATATTAACTAAGTGGTATGTAAAG,GTTTTATATTAACTAAGTGGTATGTAAAG	29,29,29	0	0	NA	NA	I-A:I-A:I-A	13,13,13	13	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA,NA|52aa|down_1|CP016106.1_1269502_1269658_+,NA|84aa|down_2|CP016106.1_1269903_1270155_+,NA|38aa|down_3|CP016106.1_1270475_1270589_+,NA|70aa|down_4|CP016106.1_1270796_1271006_+,NA|128aa|down_5|CP016106.1_1271374_1271758_-,NA|110aa|down_6|CP016106.1_1271884_1272214_+,NA|106aa|down_7|CP016106.1_1273610_1273928_-,NA|190aa|down_8|CP016106.1_1274219_1274789_-	NA|271aa|up_9|CP016106.1_1254536_1255349_+	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA)	NA|442aa|up_8|CP016106.1_1255552_1256878_+	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase	NA|360aa|up_7|CP016106.1_1257090_1258170_+	pfam02618, YceG, YceG-like family	NA|225aa|up_6|CP016106.1_1258341_1259016_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|416aa|up_5|CP016106.1_1259002_1260250_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|557aa|up_4|CP016106.1_1260321_1261992_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|95aa|up_3|CP016106.1_1262088_1262373_-	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK	NA|506aa|up_2|CP016106.1_1262395_1263913_-	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|274aa|up_1|CP016106.1_1264037_1264859_-	sd00006, TPR, Tetratricopeptide repeat	NA|476aa|up_0|CP016106.1_1265049_1266477_+	NF033435, S-layer_Clost, S-layer protein SlpA	NA|75aa|down_0|CP016106.1_1268599_1268824_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|52aa|down_1|CP016106.1_1269502_1269658_+	NA	NA|84aa|down_2|CP016106.1_1269903_1270155_+	NA	NA|38aa|down_3|CP016106.1_1270475_1270589_+	NA	NA|70aa|down_4|CP016106.1_1270796_1271006_+	NA	NA|128aa|down_5|CP016106.1_1271374_1271758_-	NA	NA|110aa|down_6|CP016106.1_1271884_1272214_+	NA	NA|106aa|down_7|CP016106.1_1273610_1273928_-	NA	NA|190aa|down_8|CP016106.1_1274219_1274789_-	NA	NA|130aa|down_9|CP016106.1_1275231_1275621_+	pfam03965, Penicillinase_R, Penicillinase repressor
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	8	1474779-1475331	2,8,2	PILER-CR,CRISPRCasFinder,CRT	no	DinG	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Type IV-A	GTTTTATATTAACTAAGTGGTATGTAAAT,GTTTTATATTAACTAAGTGGTATGTAAAT,GTTTTATATTAACTAAGTGGTATGTAAAT	29,29,29	0	0	NA	NA	I-A:I-A:I-A	6,8,7	8	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|183aa|up_4|CP016106.1_1469923_1470472_-,NA|51aa|up_0|CP016106.1_1474346_1474499_+,NA|80aa|down_4|CP016106.1_1482477_1482717_+,NA|59aa|down_5|CP016106.1_1482887_1483064_-,NA|45aa|down_9|CP016106.1_1485690_1485825_+	NA|260aa|up_9|CP016106.1_1464239_1465019_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|195aa|up_8|CP016106.1_1465122_1465707_-	pfam00882, Zn_dep_PLPC, Zinc dependent phospholipase C	NA|477aa|up_7|CP016106.1_1465906_1467337_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|315aa|up_6|CP016106.1_1467654_1468599_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|329aa|up_5|CP016106.1_1468869_1469856_-	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only]	NA|183aa|up_4|CP016106.1_1469923_1470472_-	NA	NA|143aa|up_3|CP016106.1_1470623_1471052_+	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ	NA|217aa|up_2|CP016106.1_1471136_1471787_+	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	NA|452aa|up_1|CP016106.1_1471904_1473260_-	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA	NA|51aa|up_0|CP016106.1_1474346_1474499_+	NA	NA|578aa|down_0|CP016106.1_1475656_1477390_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|282aa|down_1|CP016106.1_1477629_1478475_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|745aa|down_2|CP016106.1_1478505_1480740_-	cd01948, EAL, EAL domain	NA|270aa|down_3|CP016106.1_1481523_1482333_+	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|80aa|down_4|CP016106.1_1482477_1482717_+	NA	NA|59aa|down_5|CP016106.1_1482887_1483064_-	NA	NA|225aa|down_6|CP016106.1_1483568_1484243_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|185aa|down_7|CP016106.1_1484462_1485017_-	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases	NA|122aa|down_8|CP016106.1_1485094_1485460_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|45aa|down_9|CP016106.1_1485690_1485825_+	NA
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	9	1583666-1583959	3,9,3	PILER-CR,CRISPRCasFinder,CRT	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	GTTTTATATTAACTATATGGAATGTAAAT,GTTTTATATTAACTATATGGAATGTAAAT,GTTTTATATTAACTATATGGAATGTAAAT	29,29,29	0	0	NA	NA	I-A:I-A:I-A	3,4,4	4	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|190aa|up_7|CP016106.1_1573556_1574126_+,NA|61aa|up_4|CP016106.1_1577075_1577258_-,NA|91aa|down_0|CP016106.1_1584126_1584399_-,NA|323aa|down_5|CP016106.1_1588881_1589850_+	NA|195aa|up_9|CP016106.1_1571915_1572500_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|300aa|up_8|CP016106.1_1572652_1573552_+	TIGR02163, Ferredoxin-type_protein_NapH_homolog, ferredoxin-type protein, NapH/MauN family	NA|190aa|up_7|CP016106.1_1573556_1574126_+	NA	NA|216aa|up_6|CP016106.1_1574292_1574940_-	pfam02589, LUD_dom, LUD domain	NA|305aa|up_5|CP016106.1_1575329_1576244_-	pfam11155, DUF2935, Domain of unknown function (DUF2935)	NA|61aa|up_4|CP016106.1_1577075_1577258_-	NA	NA|283aa|up_3|CP016106.1_1577668_1578517_-	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|276aa|up_2|CP016106.1_1578535_1579363_-	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|299aa|up_1|CP016106.1_1579337_1580234_-	pfam10728, DUF2520, Domain of unknown function (DUF2520)	NA|698aa|up_0|CP016106.1_1580913_1583007_+	cd01948, EAL, EAL domain	NA|91aa|down_0|CP016106.1_1584126_1584399_-	NA	NA|273aa|down_1|CP016106.1_1584617_1585436_+	cd04782, HTH_BltR, Helix-Turn-Helix DNA binding domain of the BltR transcription regulator	NA|707aa|down_2|CP016106.1_1585568_1587689_-	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|76aa|down_3|CP016106.1_1587714_1587942_-	pfam04023, FeoA, FeoA domain	NA|147aa|down_4|CP016106.1_1588268_1588709_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|323aa|down_5|CP016106.1_1588881_1589850_+	NA	NA|403aa|down_6|CP016106.1_1590326_1591535_+	PRK13354, PRK13354, tyrosyl-tRNA synthetase; Provisional	NA|294aa|down_7|CP016106.1_1591595_1592477_-	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins	NA|305aa|down_8|CP016106.1_1592892_1593807_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|182aa|down_9|CP016106.1_1594029_1594575_+	cd01046, Rubrerythrin_like, rubrerythrin-like, diiron-binding domain
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	10	1674043-1674267	10	CRISPRCasFinder	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	GTTTTAGATTAACTATATGGAATGTAAAT	29	0	0	NA	NA	I-A	3	3	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|134aa|up_9|CP016106.1_1669164_1669566_+,NA|121aa|up_8|CP016106.1_1669559_1669922_+,NA|146aa|up_6|CP016106.1_1670339_1670777_+,NA|59aa|up_5|CP016106.1_1670769_1670946_+,NA|40aa|up_1|CP016106.1_1673331_1673451_+,NA|54aa|up_0|CP016106.1_1673599_1673761_+,NA|493aa|down_9|CP016106.1_1683679_1685158_+	NA|134aa|up_9|CP016106.1_1669164_1669566_+	NA	NA|121aa|up_8|CP016106.1_1669559_1669922_+	NA	NA|142aa|up_7|CP016106.1_1669921_1670347_+	pfam04883, HK97-gp10_like, Bacteriophage HK97-gp10, putative tail-component	NA|146aa|up_6|CP016106.1_1670339_1670777_+	NA	NA|59aa|up_5|CP016106.1_1670769_1670946_+	NA	NA|437aa|up_4|CP016106.1_1670947_1672258_+	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain	NA|157aa|up_3|CP016106.1_1672275_1672746_+	pfam09393, DUF2001, Phage tail tube protein	NA|147aa|up_2|CP016106.1_1672816_1673257_+	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC	NA|40aa|up_1|CP016106.1_1673331_1673451_+	NA	NA|54aa|up_0|CP016106.1_1673599_1673761_+	NA	NA|258aa|down_0|CP016106.1_1674395_1675169_+	pfam09851, SHOCT, Short C-terminal domain	NA|790aa|down_1|CP016106.1_1675235_1677605_+	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain	NA|232aa|down_2|CP016106.1_1677620_1678316_+	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|652aa|down_3|CP016106.1_1678308_1680264_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|87aa|down_4|CP016106.1_1680277_1680538_+	pfam10844, DUF2577, Protein of unknown function (DUF2577)	NA|140aa|down_5|CP016106.1_1680542_1680962_+	pfam10934, DUF2634, Protein of unknown function (DUF2634)	NA|350aa|down_6|CP016106.1_1680962_1682012_+	pfam04865, Baseplate_J, Baseplate J-like protein	NA|206aa|down_7|CP016106.1_1682004_1682622_+	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313)	NA|343aa|down_8|CP016106.1_1682637_1683666_+	pfam12571, DUF3751, Phage tail-collar fibre protein	NA|493aa|down_9|CP016106.1_1683679_1685158_+	NA
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	11	1812743-1813822	4,11,4	PILER-CR,CRISPRCasFinder,CRT	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	GTTTTATATTAACTAAGTGGTATGTAAAT,GTTTTATATTAACTAAGTGGTATGTAAAT,GTTTTATATTAACTAAGTGGTATGTAAAT	29,29,29	0	0	NA	NA	I-A:I-A:I-A	13,16,16	16	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA,NA|96aa|down_0|CP016106.1_1814230_1814518_+,NA|33aa|down_1|CP016106.1_1814542_1814641_+,NA|59aa|down_6|CP016106.1_1820891_1821068_-,NA|341aa|down_7|CP016106.1_1821642_1822665_+,NA|258aa|down_9|CP016106.1_1823571_1824345_+	NA|200aa|up_9|CP016106.1_1796275_1796875_-	COG4110, COG4110, Uncharacterized protein involved in stress response [General function prediction only]	NA|266aa|up_8|CP016106.1_1796977_1797775_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|329aa|up_7|CP016106.1_1798084_1799071_-	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|577aa|up_6|CP016106.1_1799554_1801285_+	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|172aa|up_5|CP016106.1_1801809_1802325_+	pfam13787, HXXEE, Protein of unknown function with HXXEE motif	NA|825aa|up_4|CP016106.1_1803130_1805605_+	PRK00451, PRK00451, aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA|486aa|up_3|CP016106.1_1805604_1807062_+	PRK04366, PRK04366, aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA|786aa|up_2|CP016106.1_1807480_1809838_+	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7	NA|106aa|up_1|CP016106.1_1809923_1810241_-	pfam06865, DUF1255, Protein of unknown function (DUF1255)	NA|424aa|up_0|CP016106.1_1810824_1812096_-	cd01303, GDEase, Guanine deaminase (GDEase)	NA|96aa|down_0|CP016106.1_1814230_1814518_+	NA	NA|33aa|down_1|CP016106.1_1814542_1814641_+	NA	NA|184aa|down_2|CP016106.1_1815056_1815608_-	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain	NA|321aa|down_3|CP016106.1_1815798_1816761_+	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|615aa|down_4|CP016106.1_1817055_1818900_+	cd08579, GDPD_memb_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases	NA|195aa|down_5|CP016106.1_1819204_1819789_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|59aa|down_6|CP016106.1_1820891_1821068_-	NA	NA|341aa|down_7|CP016106.1_1821642_1822665_+	NA	NA|296aa|down_8|CP016106.1_1822678_1823566_+	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component	NA|258aa|down_9|CP016106.1_1823571_1824345_+	NA
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	12	2123288-2123514	5,5	CRT,PILER-CR	no	csa3	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Type I-A	AAACTTTACATACCACATAGTTGATATAAAAC,GTTTTATATCAACTATGTGGTATGTAAAG	32,29	0	0	NA	NA	I-A:I-A	3,3	3	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|55aa|up_6|CP016106.1_2118098_2118263_+,NA|133aa|up_4|CP016106.1_2119794_2120193_-,NA|59aa|up_1|CP016106.1_2122324_2122501_+,NA|55aa|down_1|CP016106.1_2125049_2125214_-,NA|45aa|down_5|CP016106.1_2127854_2127989_-	NA|113aa|up_9|CP016106.1_2113700_2114039_+	pfam12650, DUF3784, Domain of unknown function (DUF3784)	NA|479aa|up_8|CP016106.1_2114445_2115882_-	PRK14328, PRK14328, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|479aa|up_7|CP016106.1_2116129_2117566_-	NF033435, S-layer_Clost, S-layer protein SlpA	NA|55aa|up_6|CP016106.1_2118098_2118263_+	NA	NA|184aa|up_5|CP016106.1_2118393_2118945_-	pfam17099, TrpP, Tryptophan transporter TrpP	NA|133aa|up_4|CP016106.1_2119794_2120193_-	NA	NA|162aa|up_3|CP016106.1_2120548_2121034_-	pfam08239, SH3_3, Bacterial SH3 domain	NA|61aa|up_2|CP016106.1_2121764_2121947_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|59aa|up_1|CP016106.1_2122324_2122501_+	NA	NA|67aa|up_0|CP016106.1_2122726_2122927_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|282aa|down_0|CP016106.1_2123980_2124826_+	pfam13026, DUF3887, Protein of unknown function (DUF3887)	NA|55aa|down_1|CP016106.1_2125049_2125214_-	NA	NA|111aa|down_2|CP016106.1_2125754_2126087_-	pfam02627, CMD, Carboxymuconolactone decarboxylase family	NA|214aa|down_3|CP016106.1_2126330_2126972_-	COG5658, COG5658, Predicted integral membrane protein [Function unknown]	csa3|99aa|down_4|CP016106.1_2126952_2127249_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|45aa|down_5|CP016106.1_2127854_2127989_-	NA	NA|251aa|down_6|CP016106.1_2128204_2128957_-	PRK10621, PRK10621, hypothetical protein; Provisional	NA|552aa|down_7|CP016106.1_2129015_2130671_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|360aa|down_8|CP016106.1_2131943_2133023_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|219aa|down_9|CP016106.1_2133106_2133763_-	COG1309, AcrR, Transcriptional regulator [Transcription]
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	13	2174402-2176933	6,12,6	PILER-CR,CRISPRCasFinder,CRT	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	GTTTTATATTAACTATATGGAATGTAAAT,ATTTACATTCCATATAGTTAATATAAAAC,ATTTACATTCCATATAGTTAATATAAAAC	29,29,29	1	1	2175815-2175850	CP016106.1_2747820-2747785	I-A:I-A:I-A	38,38,38	38	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|95aa|up_0|CP016106.1_2173948_2174233_-,NA|206aa|down_7|CP016106.1_2185552_2186170_-,NA|567aa|down_8|CP016106.1_2186339_2188040_-,NA|188aa|down_9|CP016106.1_2188436_2189000_-	NA|180aa|up_9|CP016106.1_2165403_2165943_-	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate	NA|442aa|up_8|CP016106.1_2165963_2167289_-	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA	NA|208aa|up_7|CP016106.1_2167285_2167909_-	pfam13189, Cytidylate_kin2, Cytidylate kinase-like family	NA|270aa|up_6|CP016106.1_2168000_2168810_+	cd04782, HTH_BltR, Helix-Turn-Helix DNA binding domain of the BltR transcription regulator	NA|121aa|up_5|CP016106.1_2169243_2169606_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|186aa|up_4|CP016106.1_2169955_2170513_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|233aa|up_3|CP016106.1_2170770_2171469_+	TIGR03502, lipase_Pla1_cef, extracellular lipase, Pla-1/cef family	NA|156aa|up_2|CP016106.1_2172484_2172952_+	pfam11188, DUF2975, Protein of unknown function (DUF2975)	NA|72aa|up_1|CP016106.1_2172962_2173178_+	COG3655, COG3655, Predicted transcriptional regulator [Transcription]	NA|95aa|up_0|CP016106.1_2173948_2174233_-	NA	NA|291aa|down_0|CP016106.1_2177763_2178636_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|193aa|down_1|CP016106.1_2179029_2179608_-	pfam06962, rRNA_methylase, Putative rRNA methylase	NA|239aa|down_2|CP016106.1_2179665_2180382_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|362aa|down_3|CP016106.1_2180572_2181658_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|220aa|down_4|CP016106.1_2181812_2182472_-	pfam03154, Atrophin-1, Atrophin-1 family	NA|431aa|down_5|CP016106.1_2182688_2183981_-	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|398aa|down_6|CP016106.1_2183998_2185192_-	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|206aa|down_7|CP016106.1_2185552_2186170_-	NA	NA|567aa|down_8|CP016106.1_2186339_2188040_-	NA	NA|188aa|down_9|CP016106.1_2188436_2189000_-	NA
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	14	2482699-2483122	13,7,7	CRISPRCasFinder,CRT,PILER-CR	no	c2c9_V-U4	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Type V-U4	ATTTACATTCCATATAGTTAATCTAAAAC,ATTTACATTCCATATAGTTAATCTAAAAC,GTTTTAGATTAACTATATGGAATGTAAAT	29,29,29	0	0	NA	NA	I-A:I-A:I-A	6,6,5	6	TypeV-U4	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|138aa|up_7|CP016106.1_2477427_2477841_+,NA|67aa|up_6|CP016106.1_2477859_2478060_+,NA|155aa|up_4|CP016106.1_2480420_2480885_+,NA|54aa|up_3|CP016106.1_2481208_2481370_-,NA|132aa|up_2|CP016106.1_2481421_2481817_-,NA|51aa|up_0|CP016106.1_2482355_2482508_-,NA|51aa|down_1|CP016106.1_2484504_2484657_-,NA|111aa|down_2|CP016106.1_2484930_2485263_-,NA|85aa|down_3|CP016106.1_2485289_2485544_-	NA|53aa|up_9|CP016106.1_2476833_2476992_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|78aa|up_8|CP016106.1_2477210_2477444_+	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|138aa|up_7|CP016106.1_2477427_2477841_+	NA	NA|67aa|up_6|CP016106.1_2477859_2478060_+	NA	NA|552aa|up_5|CP016106.1_2478299_2479955_-	cd09302, Jacalin_like, Jacalin-like lectin domain	NA|155aa|up_4|CP016106.1_2480420_2480885_+	NA	NA|54aa|up_3|CP016106.1_2481208_2481370_-	NA	NA|132aa|up_2|CP016106.1_2481421_2481817_-	NA	NA|122aa|up_1|CP016106.1_2481869_2482235_-	smart01040, Bro-N, BRO family, N-terminal domain	NA|51aa|up_0|CP016106.1_2482355_2482508_-	NA	NA|283aa|down_0|CP016106.1_2483388_2484237_-	pfam09851, SHOCT, Short C-terminal domain	NA|51aa|down_1|CP016106.1_2484504_2484657_-	NA	NA|111aa|down_2|CP016106.1_2484930_2485263_-	NA	NA|85aa|down_3|CP016106.1_2485289_2485544_-	NA	c2c9_V-U4|144aa|down_4|CP016106.1_2485692_2486124_-	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|64aa|down_5|CP016106.1_2486821_2487013_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|125aa|down_6|CP016106.1_2487117_2487492_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|163aa|down_7|CP016106.1_2488295_2488784_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|63aa|down_8|CP016106.1_2489819_2490008_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|117aa|down_9|CP016106.1_2490169_2490520_+	pfam12676, DUF3796, Protein of unknown function (DUF3796)
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	15	2644626-2644783	8	PILER-CR	no	cas3,cas5,cas7,cas6	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Unclear	AGGTTTAAGATTAACTAAGTGGATTTCA	28	0	0	NA	NA	NA	2	2	Unclear	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA,NA|489aa|down_3|CP016106.1_2649205_2650672_-	NA|448aa|up_9|CP016106.1_2637082_2638426_-	pfam06898, YqfD, Putative stage IV sporulation protein YqfD	NA|79aa|up_8|CP016106.1_2638438_2638675_-	pfam07873, YabP, YabP family	NA|188aa|up_7|CP016106.1_2638887_2639451_-	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|166aa|up_6|CP016106.1_2639643_2640141_-	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family	NA|148aa|up_5|CP016106.1_2640251_2640695_-	pfam09424, YqeY, Yqey-like protein	NA|60aa|up_4|CP016106.1_2640724_2640904_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|117aa|up_3|CP016106.1_2641066_2641417_-	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides	NA|433aa|up_2|CP016106.1_2641459_2642758_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|253aa|up_1|CP016106.1_2642759_2643518_-	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional	NA|316aa|up_0|CP016106.1_2643536_2644484_-	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	cas3|803aa|down_0|CP016106.1_2644924_2647333_-	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas5|266aa|down_1|CP016106.1_2647359_2648157_-	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|338aa|down_2|CP016106.1_2648172_2649186_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	NA|489aa|down_3|CP016106.1_2649205_2650672_-	NA	cas6|246aa|down_4|CP016106.1_2650676_2651414_-	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	NA|370aa|down_5|CP016106.1_2651671_2652781_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|256aa|down_6|CP016106.1_2652810_2653578_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|458aa|down_7|CP016106.1_2653765_2655139_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|312aa|down_8|CP016106.1_2655174_2656110_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|385aa|down_9|CP016106.1_2657075_2658230_-	PRK10767, PRK10767, chaperone protein DnaJ; Provisional
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	16	2743947-2744172	14,8,9	CRISPRCasFinder,CRT,PILER-CR	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	TTTACATACCACATAGTTAATATAAAA,TTTACATACCACATAGTTAATATAAAAC,GTTTTATATTAACTATGTGGTATGTAAA	27,28,28	0	0	NA	NA	I-A:I-A:I-A	3,3,2	3	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|39aa|up_2|CP016106.1_2742455_2742572_-,NA|187aa|up_0|CP016106.1_2743255_2743816_-,NA|59aa|down_0|CP016106.1_2744621_2744798_-,NA|61aa|down_2|CP016106.1_2745799_2745982_-,NA|53aa|down_3|CP016106.1_2747141_2747300_-,NA|35aa|down_7|CP016106.1_2750550_2750655_-	NA|206aa|up_9|CP016106.1_2735205_2735823_-	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313)	NA|350aa|up_8|CP016106.1_2735815_2736865_-	pfam04865, Baseplate_J, Baseplate J-like protein	NA|140aa|up_7|CP016106.1_2736865_2737285_-	pfam10934, DUF2634, Protein of unknown function (DUF2634)	NA|87aa|up_6|CP016106.1_2737289_2737550_-	pfam10844, DUF2577, Protein of unknown function (DUF2577)	NA|653aa|up_5|CP016106.1_2737563_2739522_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|232aa|up_4|CP016106.1_2739514_2740210_-	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|746aa|up_3|CP016106.1_2740221_2742459_-	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain	NA|39aa|up_2|CP016106.1_2742455_2742572_-	NA	NA|190aa|up_1|CP016106.1_2742642_2743212_-	PRK07418, PRK07418, acetolactate synthase large subunit	NA|187aa|up_0|CP016106.1_2743255_2743816_-	NA	NA|59aa|down_0|CP016106.1_2744621_2744798_-	NA	NA|273aa|down_1|CP016106.1_2744860_2745679_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|61aa|down_2|CP016106.1_2745799_2745982_-	NA	NA|53aa|down_3|CP016106.1_2747141_2747300_-	NA	NA|268aa|down_4|CP016106.1_2747361_2748165_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|57aa|down_5|CP016106.1_2748293_2748464_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|251aa|down_6|CP016106.1_2748766_2749519_-	pfam09851, SHOCT, Short C-terminal domain	NA|35aa|down_7|CP016106.1_2750550_2750655_-	NA	NA|147aa|down_8|CP016106.1_2751497_2751938_-	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC	NA|157aa|down_9|CP016106.1_2752009_2752480_-	pfam09393, DUF2001, Phage tail tube protein
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	17	2744318-2744542	10,15,9	PILER-CR,CRISPRCasFinder,CRT	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	TTTTATATTAACTATGTGGTATGTAAA,TTTACATACCACATAGTTAATATAAAA,TTTACATACCACATAGTTAATATAAAA	27,27,27	0	0	NA	NA	I-A:I-A:I-A	3,3,3	3	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|39aa|up_2|CP016106.1_2742455_2742572_-,NA|187aa|up_0|CP016106.1_2743255_2743816_-,NA|59aa|down_0|CP016106.1_2744621_2744798_-,NA|61aa|down_2|CP016106.1_2745799_2745982_-,NA|53aa|down_3|CP016106.1_2747141_2747300_-,NA|35aa|down_7|CP016106.1_2750550_2750655_-	NA|206aa|up_9|CP016106.1_2735205_2735823_-	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313)	NA|350aa|up_8|CP016106.1_2735815_2736865_-	pfam04865, Baseplate_J, Baseplate J-like protein	NA|140aa|up_7|CP016106.1_2736865_2737285_-	pfam10934, DUF2634, Protein of unknown function (DUF2634)	NA|87aa|up_6|CP016106.1_2737289_2737550_-	pfam10844, DUF2577, Protein of unknown function (DUF2577)	NA|653aa|up_5|CP016106.1_2737563_2739522_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|232aa|up_4|CP016106.1_2739514_2740210_-	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|746aa|up_3|CP016106.1_2740221_2742459_-	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain	NA|39aa|up_2|CP016106.1_2742455_2742572_-	NA	NA|190aa|up_1|CP016106.1_2742642_2743212_-	PRK07418, PRK07418, acetolactate synthase large subunit	NA|187aa|up_0|CP016106.1_2743255_2743816_-	NA	NA|59aa|down_0|CP016106.1_2744621_2744798_-	NA	NA|273aa|down_1|CP016106.1_2744860_2745679_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|61aa|down_2|CP016106.1_2745799_2745982_-	NA	NA|53aa|down_3|CP016106.1_2747141_2747300_-	NA	NA|268aa|down_4|CP016106.1_2747361_2748165_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|57aa|down_5|CP016106.1_2748293_2748464_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|251aa|down_6|CP016106.1_2748766_2749519_-	pfam09851, SHOCT, Short C-terminal domain	NA|35aa|down_7|CP016106.1_2750550_2750655_-	NA	NA|147aa|down_8|CP016106.1_2751497_2751938_-	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC	NA|157aa|down_9|CP016106.1_2752009_2752480_-	pfam09393, DUF2001, Phage tail tube protein
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	18	2746146-2746898	16,10,11	CRISPRCasFinder,CRT,PILER-CR	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	ATTTACATTCCATATAGTTAATCTAAAAC,ATTTACATTCCATATAGTTAATCTAAAAC,GTTTTAGATTAACTATATGGAATGTAAAT	29,29,29	0	0	NA	NA	I-A:I-A:I-A	11,11,10	11	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|39aa|up_5|CP016106.1_2742455_2742572_-,NA|187aa|up_3|CP016106.1_2743255_2743816_-,NA|59aa|up_2|CP016106.1_2744621_2744798_-,NA|61aa|up_0|CP016106.1_2745799_2745982_-,NA|53aa|down_0|CP016106.1_2747141_2747300_-,NA|35aa|down_4|CP016106.1_2750550_2750655_-,NA|62aa|down_8|CP016106.1_2753807_2753993_-,NA|146aa|down_9|CP016106.1_2753976_2754414_-	NA|87aa|up_9|CP016106.1_2737289_2737550_-	pfam10844, DUF2577, Protein of unknown function (DUF2577)	NA|653aa|up_8|CP016106.1_2737563_2739522_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|232aa|up_7|CP016106.1_2739514_2740210_-	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|746aa|up_6|CP016106.1_2740221_2742459_-	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain	NA|39aa|up_5|CP016106.1_2742455_2742572_-	NA	NA|190aa|up_4|CP016106.1_2742642_2743212_-	PRK07418, PRK07418, acetolactate synthase large subunit	NA|187aa|up_3|CP016106.1_2743255_2743816_-	NA	NA|59aa|up_2|CP016106.1_2744621_2744798_-	NA	NA|273aa|up_1|CP016106.1_2744860_2745679_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|61aa|up_0|CP016106.1_2745799_2745982_-	NA	NA|53aa|down_0|CP016106.1_2747141_2747300_-	NA	NA|268aa|down_1|CP016106.1_2747361_2748165_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|57aa|down_2|CP016106.1_2748293_2748464_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|251aa|down_3|CP016106.1_2748766_2749519_-	pfam09851, SHOCT, Short C-terminal domain	NA|35aa|down_4|CP016106.1_2750550_2750655_-	NA	NA|147aa|down_5|CP016106.1_2751497_2751938_-	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC	NA|157aa|down_6|CP016106.1_2752009_2752480_-	pfam09393, DUF2001, Phage tail tube protein	NA|437aa|down_7|CP016106.1_2752496_2753807_-	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain	NA|62aa|down_8|CP016106.1_2753807_2753993_-	NA	NA|146aa|down_9|CP016106.1_2753976_2754414_-	NA
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	19	2749637-2750258	17,11,12	CRISPRCasFinder,CRT,PILER-CR	no		cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Orphan	ATTTACATTCCATATAGTTAATCTAAAAC,ATTTACATTCCATATAGTTAATCTAAAAC,GTTTTAGATTAACTATATGGAATGTAAAT	29,29,29	0	0	NA	NA	I-A:I-A:I-A	9,9,8	9	Orphan	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|39aa|up_9|CP016106.1_2742455_2742572_-,NA|187aa|up_7|CP016106.1_2743255_2743816_-,NA|59aa|up_6|CP016106.1_2744621_2744798_-,NA|61aa|up_4|CP016106.1_2745799_2745982_-,NA|53aa|up_3|CP016106.1_2747141_2747300_-,NA|35aa|down_0|CP016106.1_2750550_2750655_-,NA|62aa|down_4|CP016106.1_2753807_2753993_-,NA|146aa|down_5|CP016106.1_2753976_2754414_-,NA|121aa|down_7|CP016106.1_2754831_2755194_-,NA|134aa|down_8|CP016106.1_2755187_2755589_-	NA|39aa|up_9|CP016106.1_2742455_2742572_-	NA	NA|190aa|up_8|CP016106.1_2742642_2743212_-	PRK07418, PRK07418, acetolactate synthase large subunit	NA|187aa|up_7|CP016106.1_2743255_2743816_-	NA	NA|59aa|up_6|CP016106.1_2744621_2744798_-	NA	NA|273aa|up_5|CP016106.1_2744860_2745679_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|61aa|up_4|CP016106.1_2745799_2745982_-	NA	NA|53aa|up_3|CP016106.1_2747141_2747300_-	NA	NA|268aa|up_2|CP016106.1_2747361_2748165_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|57aa|up_1|CP016106.1_2748293_2748464_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|251aa|up_0|CP016106.1_2748766_2749519_-	pfam09851, SHOCT, Short C-terminal domain	NA|35aa|down_0|CP016106.1_2750550_2750655_-	NA	NA|147aa|down_1|CP016106.1_2751497_2751938_-	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC	NA|157aa|down_2|CP016106.1_2752009_2752480_-	pfam09393, DUF2001, Phage tail tube protein	NA|437aa|down_3|CP016106.1_2752496_2753807_-	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain	NA|62aa|down_4|CP016106.1_2753807_2753993_-	NA	NA|146aa|down_5|CP016106.1_2753976_2754414_-	NA	NA|142aa|down_6|CP016106.1_2754406_2754832_-	pfam04883, HK97-gp10_like, Bacteriophage HK97-gp10, putative tail-component	NA|121aa|down_7|CP016106.1_2754831_2755194_-	NA	NA|134aa|down_8|CP016106.1_2755187_2755589_-	NA	NA|78aa|down_9|CP016106.1_2755598_2755832_-	TIGR03752, conj_TIGR03752, integrating conjugative element protein, PFL_4705 family
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	24	3270646-3271067	22,12,13	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Unclear	ATTTACATACCACTTAGTTAATATAAAAC,TATTTACATACCACTTAGTTAATATAAAAC,GTTTTATATTAACTAAGTGGTATGTAAATA	29,30,30	0	0	NA	NA	I-A:I-A:I-A	6,4,2	6	Unclear	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|67aa|up_7|CP016106.1_3263548_3263749_+,NA|257aa|up_1|CP016106.1_3268931_3269702_+,NA	NA|740aa|up_9|CP016106.1_3257895_3260115_-	cd01948, EAL, EAL domain	NA|885aa|up_8|CP016106.1_3260390_3263045_-	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|67aa|up_7|CP016106.1_3263548_3263749_+	NA	NA|197aa|up_6|CP016106.1_3263955_3264546_-	PRK08305, spoVFB, dipicolinate synthase subunit B; Reviewed	NA|292aa|up_5|CP016106.1_3264548_3265424_-	PRK08306, PRK08306, dipicolinate synthase subunit DpsA	NA|464aa|up_4|CP016106.1_3265499_3266891_-	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA	NA|379aa|up_3|CP016106.1_3266894_3268031_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|182aa|up_2|CP016106.1_3268062_3268608_-	pfam02632, BioY, BioY family	NA|257aa|up_1|CP016106.1_3268931_3269702_+	NA	NA|143aa|up_0|CP016106.1_3270156_3270585_-	PRK10562, PRK10562, putative acetyltransferase; Provisional	cas2|89aa|down_0|CP016106.1_3272086_3272353_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|327aa|down_1|CP016106.1_3272355_3273336_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|190aa|down_2|CP016106.1_3273338_3273908_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|774aa|down_3|CP016106.1_3273904_3276226_-	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas5|234aa|down_4|CP016106.1_3276236_3276938_-	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|305aa|down_5|CP016106.1_3276939_3277854_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8b2|617aa|down_6|CP016106.1_3277855_3279706_-	pfam09706, Cas_CXXC_CXXC, CRISPR-associated protein (Cas_CXXC_CXXC)	cas6|246aa|down_7|CP016106.1_3279711_3280449_-	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	WYL|296aa|down_8|CP016106.1_3280526_3281414_-	pfam13280, WYL, WYL domain	NA|639aa|down_9|CP016106.1_3281722_3283639_-	pfam02687, FtsX, FtsX-like permease family
GCA_003482325.1_ASM348232v1	CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	25	3271084-3271903	14,13,23	PILER-CR,CRT,CRISPRCasFinder	no	cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	Unclear	GTTTTATATTAACTAAGTGGTATGTAAAT,ATTTACATACCACTTAGTTAATATAAAAC,ATTTACATACCACTTAGTTAATATAAAAC	29,29,29	0	0	NA	NA	I-A:I-A:I-A	12,12,11	12	Unclear	cas14k,csa3,WYL,cas3,DEDDh,DinG,cas14j,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	NA|67aa|up_7|CP016106.1_3263548_3263749_+,NA|257aa|up_1|CP016106.1_3268931_3269702_+,NA	NA|740aa|up_9|CP016106.1_3257895_3260115_-	cd01948, EAL, EAL domain	NA|885aa|up_8|CP016106.1_3260390_3263045_-	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|67aa|up_7|CP016106.1_3263548_3263749_+	NA	NA|197aa|up_6|CP016106.1_3263955_3264546_-	PRK08305, spoVFB, dipicolinate synthase subunit B; Reviewed	NA|292aa|up_5|CP016106.1_3264548_3265424_-	PRK08306, PRK08306, dipicolinate synthase subunit DpsA	NA|464aa|up_4|CP016106.1_3265499_3266891_-	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA	NA|379aa|up_3|CP016106.1_3266894_3268031_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|182aa|up_2|CP016106.1_3268062_3268608_-	pfam02632, BioY, BioY family	NA|257aa|up_1|CP016106.1_3268931_3269702_+	NA	NA|143aa|up_0|CP016106.1_3270156_3270585_-	PRK10562, PRK10562, putative acetyltransferase; Provisional	cas2|89aa|down_0|CP016106.1_3272086_3272353_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|327aa|down_1|CP016106.1_3272355_3273336_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|190aa|down_2|CP016106.1_3273338_3273908_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|774aa|down_3|CP016106.1_3273904_3276226_-	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas5|234aa|down_4|CP016106.1_3276236_3276938_-	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|305aa|down_5|CP016106.1_3276939_3277854_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8b2|617aa|down_6|CP016106.1_3277855_3279706_-	pfam09706, Cas_CXXC_CXXC, CRISPR-associated protein (Cas_CXXC_CXXC)	cas6|246aa|down_7|CP016106.1_3279711_3280449_-	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	WYL|296aa|down_8|CP016106.1_3280526_3281414_-	pfam13280, WYL, WYL domain	NA|639aa|down_9|CP016106.1_3281722_3283639_-	pfam02687, FtsX, FtsX-like permease family
