assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003516145.1_ASM351614v1	CP026671	Leptospira borgpetersenii serovar Ceylonica strain Piyasena chromosome 1, complete sequence	1	631476-631572	1	CRISPRCasFinder	no		cas3,WYL,cas2,cas1,cas6e,cas7,cse2gr11,cas8e,Cas9_archaeal,csa3,DinG	Orphan	CCGCGACGACCATAGAGAGTCGTG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,cas2,cas1,cas6e,cas7,cse2gr11,cas8e,Cas9_archaeal,csa3,DinG	NA|75aa|up_7|CP026671.1_621213_621438_+,NA|64aa|up_6|CP026671.1_621710_621902_+,NA|134aa|up_0|CP026671.1_630879_631281_+,NA	NA|427aa|up_9|CP026671.1_617185_618466_-	PRK13789, PRK13789, phosphoribosylamine--glycine ligase; Provisional	NA|883aa|up_8|CP026671.1_618455_621104_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|75aa|up_7|CP026671.1_621213_621438_+	NA	NA|64aa|up_6|CP026671.1_621710_621902_+	NA	NA|525aa|up_5|CP026671.1_621979_623554_-	cd02518, GT2_SpsF, SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat	NA|513aa|up_4|CP026671.1_623528_625067_-	TIGR04321, hypothetical_protein_TresaDRAFT_0163, spiro-SPASM protein	NA|345aa|up_3|CP026671.1_625116_626151_-	TIGR04142, PCisTranLspir, putative peptidyl-prolyl cis-trans isomerase, LIC12922 family	NA|692aa|up_2|CP026671.1_626211_628287_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|695aa|up_1|CP026671.1_628471_630556_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|134aa|up_0|CP026671.1_630879_631281_+	NA	NA|406aa|down_0|CP026671.1_631637_632855_-	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|605aa|down_1|CP026671.1_633033_634848_+	cd11477, SLC5sbd_u1, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|207aa|down_2|CP026671.1_635484_636105_-	pfam11845, DUF3365, Protein of unknown function (DUF3365)	NA|250aa|down_3|CP026671.1_636310_637060_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|down_4|CP026671.1_637138_637660_+	cd16962, RuvC, Crossover junction endodeoxyribonuclease RuvC	NA|306aa|down_5|CP026671.1_637820_638738_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|167aa|down_6|CP026671.1_638935_639436_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|603aa|down_7|CP026671.1_639702_641511_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|205aa|down_8|CP026671.1_641775_642390_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|287aa|down_9|CP026671.1_642621_643482_+	cd00586, 4HBT, 4-hydroxybenzoyl-CoA thioesterase (4HBT)
GCA_003516145.1_ASM351614v1	CP026671	Leptospira borgpetersenii serovar Ceylonica strain Piyasena chromosome 1, complete sequence	2	1088257-1088727	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas7,cse2gr11,cas8e,cas3	cas3,WYL,cas2,cas1,cas6e,cas7,cse2gr11,cas8e,Cas9_archaeal,csa3,DinG	Type I-E	CGGTTCAACCCCACGCATGTGGGGAATAG,CGGTTCAACCCCACGCATGTGGGGAATAG,CGGTTCAACCCCACGCATGTGGGGAATAG	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	7,7,6	7	TypeI-E	cas3,WYL,cas2,cas1,cas6e,cas7,cse2gr11,cas8e,Cas9_archaeal,csa3,DinG	NA|81aa|up_5|CP026671.1_1085338_1085581_+,NA|60aa|up_4|CP026671.1_1085954_1086134_+,NA|64aa|up_3|CP026671.1_1086184_1086376_-,NA|65aa|up_1|CP026671.1_1086742_1086937_-,NA|67aa|down_2|CP026671.1_1090081_1090282_-,NA|182aa|down_4|CP026671.1_1090935_1091481_+,NA|86aa|down_5|CP026671.1_1091500_1091758_+	NA|219aa|up_9|CP026671.1_1078929_1079586_-	PRK11752, PRK11752, putative S-transferase; Provisional	NA|1058aa|up_8|CP026671.1_1079684_1082858_-	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|345aa|up_7|CP026671.1_1082861_1083896_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|455aa|up_6|CP026671.1_1083892_1085257_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|81aa|up_5|CP026671.1_1085338_1085581_+	NA	NA|60aa|up_4|CP026671.1_1085954_1086134_+	NA	NA|64aa|up_3|CP026671.1_1086184_1086376_-	NA	NA|107aa|up_2|CP026671.1_1086398_1086719_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|65aa|up_1|CP026671.1_1086742_1086937_-	NA	NA|384aa|up_0|CP026671.1_1087009_1088161_+	COG4299, COG4299, Uncharacterized protein conserved in bacteria [Function unknown]	cas2|140aa|down_0|CP026671.1_1088768_1089188_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|295aa|down_1|CP026671.1_1089120_1090005_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	NA|67aa|down_2|CP026671.1_1090081_1090282_-	NA	NA|115aa|down_3|CP026671.1_1090508_1090853_+	pfam06127, DUF962, Protein of unknown function (DUF962)	NA|182aa|down_4|CP026671.1_1090935_1091481_+	NA	NA|86aa|down_5|CP026671.1_1091500_1091758_+	NA	cas6e|267aa|down_6|CP026671.1_1091774_1092575_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas7|358aa|down_7|CP026671.1_1093590_1094664_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|179aa|down_8|CP026671.1_1094660_1095197_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|534aa|down_9|CP026671.1_1095202_1096804_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1
GCA_003516145.1_ASM351614v1	CP026671	Leptospira borgpetersenii serovar Ceylonica strain Piyasena chromosome 1, complete sequence	3	1423560-1424015	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	csa3	cas3,WYL,cas2,cas1,cas6e,cas7,cse2gr11,cas8e,Cas9_archaeal,csa3,DinG	Type I-A	CGGTTCAACCCCACGCATGTGGGGAAAAG,CGGTTCAACCCCACGCATGTGGGGAAAAG,CGGTTCAACCCCACGCATGTGGGGAAAAG	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	7,7,7	7	Orphan	cas3,WYL,cas2,cas1,cas6e,cas7,cse2gr11,cas8e,Cas9_archaeal,csa3,DinG	NA|356aa|up_7|CP026671.1_1415164_1416232_+,NA|60aa|up_6|CP026671.1_1416962_1417142_+,NA|69aa|up_0|CP026671.1_1421997_1422204_+,NA|179aa|down_0|CP026671.1_1424703_1425240_-,NA|249aa|down_1|CP026671.1_1426548_1427295_-,NA|87aa|down_3|CP026671.1_1429596_1429857_-,NA|294aa|down_5|CP026671.1_1431219_1432101_-,NA|312aa|down_8|CP026671.1_1437100_1438036_-	NA|675aa|up_9|CP026671.1_1411313_1413338_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|601aa|up_8|CP026671.1_1413351_1415154_+	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|356aa|up_7|CP026671.1_1415164_1416232_+	NA	NA|60aa|up_6|CP026671.1_1416962_1417142_+	NA	NA|434aa|up_5|CP026671.1_1417080_1418382_+	cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1	NA|260aa|up_4|CP026671.1_1418382_1419162_+	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	NA|269aa|up_3|CP026671.1_1419458_1420265_+	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily	csa3|113aa|up_2|CP026671.1_1420362_1420701_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|165aa|up_1|CP026671.1_1420752_1421247_+	cd08901, SRPBCC_CalC_Aha1-like_8, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|69aa|up_0|CP026671.1_1421997_1422204_+	NA	NA|179aa|down_0|CP026671.1_1424703_1425240_-	NA	NA|249aa|down_1|CP026671.1_1426548_1427295_-	NA	NA|409aa|down_2|CP026671.1_1428257_1429484_+	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|87aa|down_3|CP026671.1_1429596_1429857_-	NA	NA|286aa|down_4|CP026671.1_1430210_1431068_+	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|294aa|down_5|CP026671.1_1431219_1432101_-	NA	NA|607aa|down_6|CP026671.1_1432598_1434419_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|405aa|down_7|CP026671.1_1435272_1436487_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|312aa|down_8|CP026671.1_1437100_1438036_-	NA	NA|362aa|down_9|CP026671.1_1438493_1439579_+	pfam07705, CARDB, CARDB
GCA_003516145.1_ASM351614v1	CP026671	Leptospira borgpetersenii serovar Ceylonica strain Piyasena chromosome 1, complete sequence	5	1940304-1940397	5	CRISPRCasFinder	no		cas3,WYL,cas2,cas1,cas6e,cas7,cse2gr11,cas8e,Cas9_archaeal,csa3,DinG	Orphan	AAACTCAACGCAGAGCTTTCCTGA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,cas2,cas1,cas6e,cas7,cse2gr11,cas8e,Cas9_archaeal,csa3,DinG	NA|106aa|up_3|CP026671.1_1937641_1937959_+,NA|116aa|up_1|CP026671.1_1938364_1938712_+,NA|65aa|down_1|CP026671.1_1942981_1943176_-,NA|544aa|down_2|CP026671.1_1943237_1944869_-,NA|567aa|down_4|CP026671.1_1946977_1948678_-,NA|60aa|down_5|CP026671.1_1948768_1948948_+	NA|103aa|up_9|CP026671.1_1930034_1930343_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|378aa|up_8|CP026671.1_1931566_1932700_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|490aa|up_7|CP026671.1_1932718_1934188_-	COG5305, COG5305, Predicted membrane protein [Function unknown]	NA|499aa|up_6|CP026671.1_1934196_1935693_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|246aa|up_5|CP026671.1_1935722_1936460_-	PRK07102, PRK07102, SDR family oxidoreductase	NA|256aa|up_4|CP026671.1_1936751_1937519_-	PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional	NA|106aa|up_3|CP026671.1_1937641_1937959_+	NA	NA|130aa|up_2|CP026671.1_1937955_1938345_+	cd09279, RNase_HI_like, RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI	NA|116aa|up_1|CP026671.1_1938364_1938712_+	NA	NA|433aa|up_0|CP026671.1_1938704_1940003_+	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional	NA|553aa|down_0|CP026671.1_1940815_1942474_+	pfam07642, BBP2, Putative beta-barrel porin-2, OmpL-like	NA|65aa|down_1|CP026671.1_1942981_1943176_-	NA	NA|544aa|down_2|CP026671.1_1943237_1944869_-	NA	NA|664aa|down_3|CP026671.1_1944875_1946867_-	pfam04932, Wzy_C, O-Antigen ligase	NA|567aa|down_4|CP026671.1_1946977_1948678_-	NA	NA|60aa|down_5|CP026671.1_1948768_1948948_+	NA	NA|388aa|down_6|CP026671.1_1949039_1950203_-	pfam07614, DUF1577, Protein of unknown function (DUF1577)	NA|509aa|down_7|CP026671.1_1950273_1951800_+	PTZ00314, PTZ00314, inosine-5'-monophosphate dehydrogenase; Provisional	NA|261aa|down_8|CP026671.1_1951801_1952584_+	cd16329, LolA_like, proteins similar to periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB	NA|230aa|down_9|CP026671.1_1952593_1953283_+	pfam04452, Methyltrans_RNA, RNA methyltransferase
