The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	7736	57204	4920509	transposase,protease	Ralstonia_phage(36.36%)	44	NA	NA
AXX65666.1|7736_8573_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AXX65667.1|8759_9566_+	peptidase	NA	NA	NA	NA	NA
AXX65668.1|9842_11036_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65669.1|11189_11861_+	energy transducer TonB	NA	NA	NA	NA	NA
AXX65670.1|11945_12707_+	biopolymer transporter ExbB	NA	NA	NA	NA	NA
AXX65671.1|12753_13176_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AXX65672.1|13179_13593_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AXX65673.1|13888_14656_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AXX65674.1|14666_14936_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65675.1|15010_16471_-	cardiolipin synthase	NA	NA	NA	NA	NA
AXX65676.1|17117_18128_-	fructose 1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	37.8	9.5e-49
AXX65677.1|18400_19603_-	aromatic amino acid aminotransferase	NA	NA	NA	NA	NA
AXX65678.1|19744_21883_+	ligand-gated channel	NA	A0A1B0VCF0	Salmonella_phage	40.9	5.3e-65
AXX69186.1|22093_22387_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65679.1|23160_24141_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	55.5	1.3e-87
AXX65680.1|24188_25355_-	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA	NA
AXX69187.1|27540_28749_+	trans-2-enoyl-CoA reductase	NA	NA	NA	NA	NA
AXX65681.1|29376_30399_-	2-keto-3-deoxygluconate kinase	NA	NA	NA	NA	NA
AXX65682.1|30685_30967_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX65683.1|30979_31219_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65684.1|31221_32190_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	5.6e-99
AXX65685.1|32542_33814_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65686.1|33825_34518_+	hypothetical protein	NA	G3M9Y6	Bacillus_virus	24.2	4.4e-05
AXX65687.1|34705_35092_-	hypothetical protein	NA	K4I1H9	Acidithiobacillus_phage	67.3	2.8e-33
AXX65688.1|35119_36496_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	56.9	4.1e-79
AXX65689.1|39122_39455_+	dihydrolipoamide acyltransferase	NA	NA	NA	NA	NA
AXX65690.1|39508_39751_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65691.1|39692_40016_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65692.1|40146_40533_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65693.1|40481_41462_-|transposase	IS5 family transposase ISXoo7	transposase	A0A077K814	Ralstonia_phage	55.9	5.3e-89
AXX65694.1|41821_42073_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65695.1|42080_43370_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.2	2.1e-40
AXX65696.1|43809_44145_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69188.1|44419_44851_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65697.1|45199_46609_-	pyridine nucleotide-disulfide oxidoreductase	NA	NA	NA	NA	NA
AXX65698.1|47926_48187_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65699.1|48203_48536_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65700.1|48535_48994_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65701.1|49401_50370_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.5e-99
AXX65702.1|50506_51889_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX65703.1|51990_53205_-|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
AXX65704.1|53241_53751_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65705.1|55328_56144_-	type IV secretion protein Rhs	NA	NA	NA	NA	NA
AXX65706.1|56205_57204_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	80729	141788	4920509	protease,transposase	Ralstonia_phage(33.33%)	56	NA	NA
AXX69189.1|80729_81155_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX65722.1|81073_81493_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX65723.1|81552_81813_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69190.1|81831_84390_-	Ion channel protein	NA	NA	NA	NA	NA
AXX65724.1|84574_84916_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65725.1|87132_88686_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65726.1|89149_89713_-	lytic transglycosylase	NA	A0A0K2QQJ4	Ralstonia_phage	38.5	4.4e-11
AXX65727.1|90276_90489_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65728.1|91258_93076_-	EscC/YscC/HrcC family type III secretion system outer membrane ring protein	NA	NA	NA	NA	NA
AXX65729.1|93158_93989_-	EscT/YscT/HrcT family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
AXX65730.1|93985_94495_-	type III secretion protein HrpB7	NA	NA	NA	NA	NA
AXX65731.1|94487_95816_-	EscN/YscN/HrcN family type III secretion system ATPase	NA	NA	NA	NA	NA
AXX65732.1|95805_96507_-	ATP-dependent helicase HrpB	NA	NA	NA	NA	NA
AXX65733.1|96491_97121_-	type III secretion protein HrpB4	NA	NA	NA	NA	NA
AXX65734.1|97128_97890_-	EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein	NA	NA	NA	NA	NA
AXX65735.1|97891_98284_-	type III secretion protein HrpB2	NA	NA	NA	NA	NA
AXX65736.1|98317_98773_-	serine kinase	NA	NA	NA	NA	NA
AXX65737.1|98987_100067_+	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA	NA
AXX65738.1|100060_101998_+	EscV/YscV/HrcV family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
AXX65739.1|101997_102639_+	type III secretion protein HpaP	NA	NA	NA	NA	NA
AXX65740.1|102731_103685_+	aldolase	NA	NA	NA	NA	NA
AXX65741.1|103671_104316_+	EscR/YscR/HrcR family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
AXX65742.1|104320_104581_+	EscS/YscS/HrcS family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
AXX65743.1|104577_105405_+	4-hydroxyphenylacetate catabolism regulator HpaA	NA	NA	NA	NA	NA
AXX65744.1|105401_106340_+	serine kinase	NA	NA	NA	NA	NA
AXX65745.1|106349_106592_+	serine kinase	NA	NA	NA	NA	NA
AXX65746.1|106723_106954_+	serine kinase	NA	NA	NA	NA	NA
AXX65747.1|107008_107479_+	4-hydroxyphenylacetate 3-monooxygenase	NA	NA	NA	NA	NA
AXX65748.1|107893_109879_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65749.1|109875_110322_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65750.1|110550_111972_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX65751.1|112454_114827_+	serine kinase	NA	NA	NA	NA	NA
AXX69191.1|115702_117331_+	HpaF protein	NA	NA	NA	NA	NA
AXX65752.1|117888_118272_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65753.1|118268_118754_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65754.1|118757_119120_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65755.1|119236_120673_-|protease	serine endoprotease DegQ	protease	W5SAB9	Pithovirus	30.7	1.5e-10
AXX65756.1|120914_121733_+	histidine biosynthesis protein HisIE	NA	NA	NA	NA	NA
AXX65757.1|122192_122510_-	ATP-binding protein	NA	NA	NA	NA	NA
AXX65758.1|122815_123703_-	TIGR01777 family protein	NA	NA	NA	NA	NA
AXX65759.1|124409_125360_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	5.2e-97
AXX65760.1|125473_125659_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69192.1|125750_126011_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65761.1|126063_126345_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65762.1|126483_127542_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXX65763.1|127682_128630_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.4	4.3e-43
AXX65764.1|128884_129196_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65765.1|130468_130651_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65766.1|130662_131133_+	DNA mismatch repair protein MutT	NA	NA	NA	NA	NA
AXX65767.1|132086_132485_+	attachment protein	NA	NA	NA	NA	NA
AXX65768.1|133286_134243_+|transposase	IS30 family transposase IS1112a	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
AXX65769.1|134879_136133_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXX65770.1|136478_137168_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	3.7e-36
AXX65771.1|137180_138338_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65772.1|138350_139661_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65773.1|141536_141788_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 3
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	276545	366627	4920509	tRNA,transposase	Ralstonia_phage(22.22%)	60	NA	NA
AXX65849.1|276545_277514_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX65850.1|277767_279930_+	epimerase	NA	NA	NA	NA	NA
AXX65851.1|281841_282444_+	biliverdin-producing heme oxygenase	NA	NA	NA	NA	NA
AXX65852.1|282440_284345_+	phytochrome	NA	Q6XLU9	Feldmannia_irregularis_virus	27.7	3.9e-19
AXX65853.1|293223_293484_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65854.1|293664_294480_+	formamidopyrimidine-DNA glycosylase	NA	A0A127AWE5	Bacillus_phage	27.3	6.3e-19
AXX65855.1|294826_295888_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX65856.1|295893_296313_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69202.1|296231_296657_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX65857.1|298455_299514_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65858.1|299524_299815_-	anti-sigma B factor antagonist	NA	NA	NA	NA	NA
AXX65859.1|299804_300467_-	organic solvent ABC transporter	NA	NA	NA	NA	NA
AXX65860.1|300463_301015_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
AXX65861.1|301026_301776_-	ABC transporter permease	NA	NA	NA	NA	NA
AXX65862.1|301775_302570_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.8	1.7e-08
AXX65863.1|302954_303242_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65864.1|303260_303818_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXX65865.1|303835_304834_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX65866.1|305645_306602_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.9e-41
AXX65867.1|306673_307093_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69203.1|307011_307437_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX65868.1|308405_309620_+|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	4.1e-54
AXX65869.1|310672_311908_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX65870.1|313306_313735_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65871.1|313745_314195_+	3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AXX65872.1|314175_314403_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65873.1|314710_316465_-	polyvinylalcohol dehydrogenase	NA	A0A0M4JT37	Mollivirus	35.6	7.3e-81
AXX65874.1|317358_317778_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69204.1|317696_318122_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX65875.1|318174_318759_-	gluconokinase	NA	NA	NA	NA	NA
AXX65876.1|318916_320299_+	MFS transporter	NA	NA	NA	NA	NA
AXX69205.1|320301_322701_+	NdvB protein	NA	NA	NA	NA	NA
AXX65877.1|322804_325447_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65878.1|325853_326054_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69206.1|326194_329644_+	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
AXX65879.1|329836_330421_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65880.1|330897_331674_-	transcriptional regulator	NA	NA	NA	NA	NA
AXX65881.1|331854_333156_+	L-fucose:H+ symporter permease	NA	NA	NA	NA	NA
AXX65882.1|333158_333518_+	L-fucose mutarotase	NA	NA	NA	NA	NA
AXX65883.1|335600_336599_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX65884.1|337425_339588_+	type III secretion system effector protein	NA	NA	NA	NA	NA
AXX65885.1|339714_341883_-	dipeptidyl carboxypeptidase II	NA	NA	NA	NA	NA
AXX69207.1|342256_342442_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65886.1|342520_343150_-	acyltransferase	NA	NA	NA	NA	NA
AXX65887.1|343152_343584_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AXX65888.1|343640_344219_+	hypothetical protein	NA	NA	NA	NA	NA
AXX65889.1|344314_345067_-	pseudouridylate synthase	NA	NA	NA	NA	NA
AXX65890.1|345291_345681_-	cupin	NA	NA	NA	NA	NA
AXX65891.1|345794_347468_-	ubiquinone biosynthesis protein UbiB	NA	E5EQY1	Bathycoccus_sp._RCC1105_virus	28.6	3.1e-28
AXX65892.1|347464_348109_-	SCP2 domain-containing protein	NA	NA	NA	NA	NA
AXX65893.1|348118_348313_-	hypothetical protein	NA	NA	NA	NA	NA
AXX65894.1|348343_349447_+	D-alanine--D-alanine ligase A	NA	NA	NA	NA	NA
AXX65895.1|349824_351282_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX65896.1|351280_352249_+|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX65897.1|352434_353670_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX65898.1|357283_357568_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69208.1|358777_359203_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX65899.1|359121_359541_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX65900.1|363494_364493_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX65901.1|365520_366627_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 4
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	675745	734530	4920509	transposase,protease	Bacillus_phage(16.67%)	60	NA	NA
AXX66150.1|675745_677653_-|protease	protease	protease	A0A1B0T6A2	Bacillus_phage	31.0	3.0e-19
AXX66151.1|677699_680669_-	adhesin	NA	NA	NA	NA	NA
AXX66152.1|680874_682248_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXX66153.1|682229_682958_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXX66154.1|683134_683419_-	hypothetical protein	NA	A0A0K1Y4M8	Klebsiella_phage	43.4	1.6e-06
AXX66155.1|683427_683994_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66156.1|684380_685538_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
AXX66157.1|685548_686403_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AXX66158.1|686500_686992_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66159.1|687297_687762_-	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA	NA
AXX69236.1|688042_688468_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66160.1|688519_688999_-	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AXX66161.1|689147_690437_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA	NA
AXX66162.1|690436_691537_+	alanine racemase	NA	NA	NA	NA	NA
AXX66163.1|691939_692521_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69237.1|692769_693216_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66164.1|693202_693511_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66165.1|693597_695634_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	25.9	4.2e-19
AXX66166.1|696118_696427_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66167.1|696515_697853_+	sorbosone dehydrogenase	NA	NA	NA	NA	NA
AXX66168.1|698030_698300_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66169.1|698406_698652_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66170.1|698842_699910_+	16S rRNA methyltransferase	NA	NA	NA	NA	NA
AXX66171.1|699906_700620_+	16S rRNA pseudouridine(516) synthase	NA	NA	NA	NA	NA
AXX66172.1|700616_701297_+	hydrolase	NA	NA	NA	NA	NA
AXX69238.1|701432_702239_-	oxidoreductase	NA	NA	NA	NA	NA
AXX66173.1|702660_703221_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66174.1|703379_704231_-	lysophospholipase	NA	NA	NA	NA	NA
AXX69239.1|705954_706440_-	nucleotide-binding protein	NA	NA	NA	NA	NA
AXX66175.1|706547_707444_+	EamA family transporter	NA	NA	NA	NA	NA
AXX66176.1|707562_708570_+	methionine import ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	38.5	2.0e-30
AXX66177.1|708566_709262_+	metal ABC transporter permease	NA	NA	NA	NA	NA
AXX66178.1|709356_710157_+	methionine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXX66179.1|710533_711091_+	DUF1453 domain-containing protein	NA	NA	NA	NA	NA
AXX66180.1|711375_712062_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66181.1|712203_712764_+	DNA-deoxyinosine glycosylase	NA	NA	NA	NA	NA
AXX69240.1|712945_713704_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66182.1|713833_715627_+	dihydrolipoamide acetyltransferase	NA	NA	NA	NA	NA
AXX66183.1|715623_716271_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66184.1|716287_718111_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.4	8.5e-48
AXX66185.1|718172_718463_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66186.1|718601_719414_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66187.1|719979_720312_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66188.1|720337_721138_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
AXX66189.1|721210_721513_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
AXX66190.1|721627_722098_+	ATP synthase subunit B	NA	NA	NA	NA	NA
AXX66191.1|722101_722629_+	ATP synthase subunit delta	NA	NA	NA	NA	NA
AXX66192.1|722676_724224_+	ATP synthase subunit alpha	NA	NA	NA	NA	NA
AXX66193.1|724417_725281_+	ATP synthase subunit gamma	NA	NA	NA	NA	NA
AXX66194.1|725425_726832_+	ATP synthase subunit beta	NA	NA	NA	NA	NA
AXX66195.1|726975_727398_+	ATP synthase epsilon chain	NA	NA	NA	NA	NA
AXX66196.1|727629_728202_+	chorismate mutase	NA	NA	NA	NA	NA
AXX66197.1|728567_728834_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66198.1|728724_729108_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66199.1|729252_730617_+	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	A0A2K9L821	Tupanvirus	33.5	1.1e-23
AXX66200.1|731124_731346_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX66201.1|731342_732341_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX69242.1|732430_732637_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69241.1|732555_732981_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX66202.1|733294_734530_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	774112	842814	4920509	tRNA,transposase	Enterobacteria_phage(17.65%)	49	NA	NA
AXX66238.1|774112_775519_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX69250.1|775834_777019_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.4	1.0e-41
AXX66239.1|777073_777439_+	hypothetical protein	NA	K4I1H9	Acidithiobacillus_phage	59.7	1.3e-19
AXX66240.1|777548_778862_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	3.8e-13
AXX66241.1|778851_779670_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AXX66242.1|779892_780834_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
AXX66243.1|780833_781580_-	EtfB protein	NA	NA	NA	NA	NA
AXX66244.1|783135_784023_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	58.2	2.2e-94
AXX66245.1|784019_784577_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	47.5	2.3e-44
AXX66246.1|784573_785482_+	NAD(P)-dependent oxidoreductase	NA	I7HXC9	Enterobacteria_phage	35.1	1.8e-27
AXX66247.1|785598_787002_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.6	2.5e-47
AXX66248.1|787048_788395_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.9	2.6e-33
AXX66249.1|788528_789260_+	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA	NA
AXX66250.1|789259_789889_+	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA	NA
AXX66251.1|789946_792034_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66252.1|792030_793680_-	electron transfer flavoprotein-ubiquinone oxidoreductase	NA	NA	NA	NA	NA
AXX66253.1|793795_794404_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	A0A2K9L0M4	Tupanvirus	31.4	1.8e-23
AXX69251.1|794797_795028_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66254.1|794954_795599_-	ABC transporter	NA	NA	NA	NA	NA
AXX66255.1|795595_796522_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXX66256.1|796524_797367_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.1	9.1e-13
AXX66257.1|797452_798565_-	ABC transporter permease	NA	NA	NA	NA	NA
AXX66258.1|798734_799994_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66259.1|800055_800517_-	DNA-binding protein	NA	NA	NA	NA	NA
AXX66260.1|800659_802354_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
AXX66261.1|802465_802870_-	DUF4124 domain-containing protein	NA	NA	NA	NA	NA
AXX66262.1|803001_803775_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AXX66263.1|803785_804253_+	alanine acetyltransferase	NA	NA	NA	NA	NA
AXX66264.1|804249_804732_+	ribosomal-protein-alanine N-acetyltransferase RimI	NA	NA	NA	NA	NA
AXX66265.1|808299_809268_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
AXX66266.1|809417_810800_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX69252.1|811041_813015_+	lytic murein transglycosylase	NA	A0A0H3V0Q1	Geobacillus_virus	36.7	7.9e-15
AXX66267.1|817361_817676_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXX66268.1|818864_819434_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX66269.1|819591_819894_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66270.1|819901_822844_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	34.8	6.4e-130
AXX66271.1|823051_823477_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
AXX66272.1|823517_823823_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66273.1|823822_825295_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.2	6.2e-49
AXX66274.1|825402_826485_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
AXX69253.1|826481_827588_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
AXX66275.1|828002_828470_-	RDD family protein	NA	NA	NA	NA	NA
AXX66276.1|828896_829868_+	site-specific tyrosine recombinase XerD	NA	G1JX48	Mycobacterium_phage	27.9	1.1e-17
AXX66277.1|830335_831133_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69254.1|831372_831639_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66278.1|831531_835584_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	56.9	7.5e-121
AXX66279.1|835841_836105_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66280.1|836561_840359_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66281.1|841857_842814_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.9	2.4e-41
>prophage 6
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	912093	1054490	4920509	integrase,protease,transposase	Acidithiobacillus_phage(13.79%)	104	1019856:1019872	1060746:1060762
AXX66334.1|912093_913056_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.8	1.1e-41
AXX66335.1|913189_913750_-	bacterioferritin	NA	NA	NA	NA	NA
AXX66336.1|913792_914275_-	peroxiredoxin	NA	A0A1D8KSL1	Synechococcus_phage	36.2	3.1e-21
AXX66337.1|914437_914914_+	heat-shock protein	NA	NA	NA	NA	NA
AXX66338.1|915324_916224_+	cytochrome C biogenesis protein	NA	A0A2L0UZR4	Agrobacterium_phage	27.7	5.9e-18
AXX66339.1|916463_916850_+	response regulator	NA	W8CYM9	Bacillus_phage	31.8	9.6e-10
AXX66340.1|917479_918607_+	HflK protein	NA	NA	NA	NA	NA
AXX66341.1|918606_919470_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
AXX66342.1|919763_919949_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66343.1|920286_921579_+	adenylosuccinate synthetase	NA	W5S5V7	Pithovirus	37.5	8.4e-74
AXX66344.1|921904_924577_+	aminopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	28.0	2.6e-77
AXX66345.1|924770_925553_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69257.1|925663_927040_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.8	1.7e-77
AXX66346.1|927283_927919_+	transcriptional regulator	NA	NA	NA	NA	NA
AXX66347.1|927918_928356_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66348.1|928551_929079_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66349.1|929204_929402_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AXX66350.1|929411_930524_+	glycosyl transferase	NA	NA	NA	NA	NA
AXX66351.1|930504_931839_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66352.1|932072_932993_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA	NA
AXX66353.1|933069_934386_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AXX66354.1|934658_936038_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66355.1|936058_936715_-	protein-L-isoaspartate O-methyltransferase	NA	NA	NA	NA	NA
AXX66356.1|936843_937497_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AXX66357.1|937716_938229_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69258.1|939288_940173_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXX66358.1|940293_941742_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
AXX66359.1|941809_942457_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AXX66360.1|943273_944347_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
AXX66361.1|944677_946240_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	24.4	4.3e-08
AXX66362.1|946236_947361_-	serine/threonine dehydratase	NA	NA	NA	NA	NA
AXX66363.1|947436_947694_-	acetolactate synthase	NA	NA	NA	NA	NA
AXX66364.1|947677_949399_-	acetolactate synthase 2 catalytic subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	32.9	6.1e-64
AXX66365.1|949442_950444_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AXX66366.1|951720_953598_+	phosphomethylpyrimidine synthase	NA	NA	NA	NA	NA
AXX66367.1|954023_956375_+	biopolymer transporter Tol	NA	NA	NA	NA	NA
AXX66368.1|956485_957379_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXX66369.1|957427_960394_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	24.9	8.7e-42
AXX66370.1|961008_962157_-	HDOD domain-containing protein	NA	NA	NA	NA	NA
AXX66371.1|962270_962807_-	inorganic pyrophosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	53.6	3.6e-47
AXX66372.1|963003_963486_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66373.1|965728_966727_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX66374.1|967181_967673_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66375.1|968864_969185_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66376.1|969352_970609_-	6-phosphofructokinase	NA	NA	NA	NA	NA
AXX66377.1|970768_971332_+	adenylate kinase	NA	A0A1B4XWI3	Tenacibaculum_phage	31.4	3.6e-13
AXX69259.1|971698_973057_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
AXX66378.1|973056_973653_+|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AXX66379.1|973799_974684_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66380.1|976665_977280_+	glutathione S-transferase	NA	NA	NA	NA	NA
AXX66381.1|977362_978349_-	malate dehydrogenase	NA	NA	NA	NA	NA
AXX66382.1|978464_978959_-	peptidyl-prolyl cis-trans isomerase	NA	A0A1V0SCU1	Indivirus	52.3	5.5e-26
AXX66383.1|979203_981033_+	GTP-binding protein TypA	NA	NA	NA	NA	NA
AXX66384.1|981051_981522_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66385.1|982444_983572_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66386.1|983672_985055_-	3-deoxy-7-phosphoheptulonate synthase class II	NA	NA	NA	NA	NA
AXX66387.1|985302_987426_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX66388.1|987954_988473_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AXX66389.1|990343_990745_+	hypothetical protein	NA	K4ICS3	Acidithiobacillus_phage	42.7	2.2e-17
AXX66390.1|990797_992033_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX66391.1|992646_993537_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66392.1|993626_993767_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX66393.1|994594_994897_-	hypothetical protein	NA	K4I1H9	Acidithiobacillus_phage	64.3	1.0e-19
AXX66394.1|997029_997323_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66395.1|997326_998562_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX69260.1|1000914_1001325_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66396.1|1001321_1001585_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AXX69261.1|1001558_1002533_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.1	1.4e-36
AXX66397.1|1003562_1004561_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX66398.1|1004862_1006440_+	chlamydia polymorphic membrane family protein	NA	NA	NA	NA	NA
AXX69262.1|1006507_1006933_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX66399.1|1006851_1007271_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX66400.1|1009939_1010908_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX66401.1|1011168_1011630_-	cell wall hydrolase	NA	NA	NA	NA	NA
AXX66402.1|1012178_1012421_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
AXX69263.1|1012414_1012840_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX66403.1|1012758_1013178_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX66404.1|1013210_1013942_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	37.5	1.1e-06
AXX66405.1|1016515_1017514_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX66406.1|1017744_1018752_+	isocitrate dehydrogenase	NA	NA	NA	NA	NA
AXX66407.1|1018895_1019657_-	hypothetical protein	NA	NA	NA	NA	NA
1019856:1019872	attL	TCGGGGGTTCGAATCCC	NA	NA	NA	NA
AXX66408.1|1022055_1022364_+	hypothetical protein	NA	K4I1H9	Acidithiobacillus_phage	64.6	3.8e-17
AXX66409.1|1022974_1024267_+	trigger factor	NA	NA	NA	NA	NA
AXX66410.1|1024359_1024986_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
AXX66411.1|1025110_1026397_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.9	9.0e-137
AXX66412.1|1026540_1029012_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.2	1.7e-224
AXX66413.1|1029225_1029498_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	64.0	2.2e-21
AXX66414.1|1030329_1032300_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AXX66415.1|1033012_1034191_-	lytic transglycosylase	NA	NA	NA	NA	NA
AXX66416.1|1034187_1034955_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AXX66417.1|1034967_1035624_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66418.1|1035651_1036104_+	ribonuclease HI	NA	A0A1Q2U2R0	Vibrio_phage	55.4	2.8e-40
AXX66419.1|1036112_1036847_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	40.4	8.7e-36
AXX66420.1|1037282_1037987_-	protein phosphatase	NA	NA	NA	NA	NA
AXX66421.1|1038812_1039442_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66422.1|1040329_1040530_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69264.1|1043718_1045869_+	hypothetical protein	NA	A0A077K801	Ralstonia_phage	28.2	2.0e-27
AXX66423.1|1045865_1047563_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66424.1|1047882_1050087_+	hypothetical protein	NA	A0A077K801	Ralstonia_phage	29.7	5.9e-19
AXX66425.1|1050083_1051778_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66426.1|1051774_1052038_+	paar motif family protein	NA	A4JWV5	Burkholderia_virus	43.4	7.5e-06
AXX66427.1|1052099_1052657_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66428.1|1052706_1053705_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX69265.1|1053803_1054490_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	51.8	2.3e-54
1060746:1060762	attR	GGGATTCGAACCCCCGA	NA	NA	NA	NA
>prophage 7
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	1152960	1207621	4920509	transposase	Leptospira_phage(25.0%)	47	NA	NA
AXX66507.1|1152960_1154343_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX66508.1|1154644_1155295_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66509.1|1155604_1158034_-	peptidase	NA	NA	NA	NA	NA
AXX66510.1|1158249_1159308_+	pilus assembly protein PilM	NA	NA	NA	NA	NA
AXX66511.1|1159307_1160066_+	fimbrial protein	NA	NA	NA	NA	NA
AXX66512.1|1160062_1160728_+	fimbrial protein	NA	NA	NA	NA	NA
AXX66513.1|1160724_1161258_+	fimbrial protein	NA	NA	NA	NA	NA
AXX66514.1|1161277_1163227_+	fimbrial protein	NA	NA	NA	NA	NA
AXX66515.1|1164238_1165474_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX66516.1|1165544_1166579_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	41.7	1.1e-65
AXX66517.1|1166388_1166913_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66518.1|1167201_1168221_+	AAA family ATPase	NA	NA	NA	NA	NA
AXX66519.1|1168241_1169204_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AXX66520.1|1169206_1169668_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66521.1|1169664_1170672_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66522.1|1170668_1172471_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66523.1|1172467_1174225_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66524.1|1174520_1174838_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66525.1|1175086_1176316_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
AXX66526.1|1176542_1178543_+	transketolase	NA	NA	NA	NA	NA
AXX66527.1|1178793_1179348_+	outer membrane receptor protein	NA	NA	NA	NA	NA
AXX66528.1|1179361_1180078_-	endopeptidase	NA	A0A0M5M794	Arthrobacter_phage	34.2	2.7e-05
AXX66529.1|1180080_1181073_-	murein L,D-transpeptidase	NA	NA	NA	NA	NA
AXX66530.1|1181392_1184107_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX66531.1|1184226_1185402_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66532.1|1185536_1187495_-	acetyl-CoA hydrolase	NA	NA	NA	NA	NA
AXX69275.1|1187670_1188375_+	thermostable hemolysin	NA	NA	NA	NA	NA
AXX66533.1|1188314_1189814_+	long-chain acyl-CoA synthetase	NA	NA	NA	NA	NA
AXX66534.1|1189810_1190485_+	biliverdin-producing heme oxygenase	NA	NA	NA	NA	NA
AXX66535.1|1190484_1191324_+	short chain dehydrogenase	NA	NA	NA	NA	NA
AXX66536.1|1191304_1191568_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66537.1|1191990_1192689_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	35.0	9.8e-29
AXX69276.1|1192706_1194068_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXX66538.1|1194167_1194533_+	transcriptional regulator	NA	NA	NA	NA	NA
AXX66539.1|1194522_1195839_+	energy transducer TonB	NA	NA	NA	NA	NA
AXX66540.1|1195835_1196420_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66541.1|1196762_1197377_-	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	2.1e-19
AXX66542.1|1197376_1198069_-	molybdate ABC transporter permease	NA	NA	NA	NA	NA
AXX66543.1|1198079_1198856_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXX69277.1|1198926_1199757_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AXX66544.1|1199770_1200544_-	endonuclease	NA	NA	NA	NA	NA
AXX66545.1|1200554_1200752_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66546.1|1203762_1204059_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69278.1|1204414_1205416_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AXX66547.1|1205803_1206223_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69279.1|1206141_1206567_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX66548.1|1206622_1207621_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
>prophage 8
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	1331966	1415765	4920509	tRNA,transposase	Acinetobacter_phage(36.36%)	54	NA	NA
AXX66649.1|1331966_1332965_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX69285.1|1333266_1334643_+	signal recognition particle protein	NA	NA	NA	NA	NA
AXX66650.1|1336215_1337286_+	nitronate monooxygenase	NA	NA	NA	NA	NA
AXX66651.1|1337276_1338074_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66652.1|1338183_1338441_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AXX66653.1|1338484_1338997_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AXX66654.1|1339062_1339842_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AXX66655.1|1339965_1340373_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AXX69286.1|1340998_1342489_-	MATE family efflux transporter	NA	NA	NA	NA	NA
AXX69287.1|1342829_1343237_+	RNA-binding protein	NA	NA	NA	NA	NA
AXX66656.1|1343371_1343632_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX66657.1|1343656_1344871_+|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
AXX66658.1|1346180_1346456_-	glutathione transferase	NA	NA	NA	NA	NA
AXX66659.1|1346485_1346791_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66660.1|1347236_1349822_+	ATP-dependent chaperone ClpB	NA	A0A1C3S747	Escherichia_phage	35.4	3.8e-126
AXX66661.1|1349946_1350858_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66662.1|1354101_1355979_+	TonB-dependent vitamin B12 receptor	NA	A0A0P0I887	Acinetobacter_phage	29.5	4.9e-06
AXX66663.1|1357751_1358345_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69288.1|1358344_1358944_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66664.1|1358940_1359552_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
AXX66665.1|1360065_1360587_+	adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase	NA	NA	NA	NA	NA
AXX66666.1|1360583_1361630_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA	NA
AXX66667.1|1361626_1362217_+	fructose-2,6-bisphosphatase	NA	NA	NA	NA	NA
AXX69289.1|1362213_1362948_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA	NA
AXX66668.1|1363122_1364319_-	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
AXX66669.1|1364315_1366085_-	iron transporter	NA	NA	NA	NA	NA
AXX66670.1|1366062_1367259_-	MFS transporter	NA	NA	NA	NA	NA
AXX69290.1|1367255_1369058_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AXX66671.1|1369054_1370281_-	carboxylate--amine ligase	NA	NA	NA	NA	NA
AXX66672.1|1370516_1372658_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXX66673.1|1372658_1373420_-	4-hydroxy-2-oxovalerate aldolase	NA	NA	NA	NA	NA
AXX66674.1|1374831_1376541_-	Kef family K(+) transporter	NA	NA	NA	NA	NA
AXX66675.1|1377639_1380039_-	ferric enterobactin receptor	NA	A0A0P0I887	Acinetobacter_phage	33.3	4.9e-11
AXX66676.1|1380371_1382759_-	ligand-gated channel	NA	A0A0P0I887	Acinetobacter_phage	32.9	9.2e-10
AXX66677.1|1383032_1383473_-	glyoxalase	NA	NA	NA	NA	NA
AXX66678.1|1383936_1386324_-	ligand-gated channel	NA	A0A0P0I887	Acinetobacter_phage	35.7	7.1e-10
AXX66679.1|1386499_1388416_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	30.5	1.2e-65
AXX66680.1|1388687_1389113_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66681.1|1389136_1390012_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.4	2.0e-15
AXX66682.1|1391120_1391939_+	xylanase	NA	NA	NA	NA	NA
AXX66683.1|1394547_1395339_-	transcriptional regulator	NA	NA	NA	NA	NA
AXX66684.1|1396100_1397531_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXX66685.1|1397743_1399612_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	21.0	9.7e-15
AXX66686.1|1399636_1401961_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66687.1|1404116_1404596_-|transposase	transposase	transposase	K4ICS3	Acidithiobacillus_phage	67.2	1.2e-41
AXX69291.1|1404750_1405935_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.4	1.0e-41
AXX69292.1|1406026_1407379_-	glutamine synthetase	NA	NA	NA	NA	NA
AXX66688.1|1407444_1408380_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
AXX66689.1|1408446_1409046_-	amino acid permease	NA	NA	NA	NA	NA
AXX69293.1|1409089_1409941_-	gamma-glutamyl-gamma-aminobutyrate hydrolase	NA	NA	NA	NA	NA
AXX69294.1|1409958_1410999_-	dihydrorhizobitoxine desaturase	NA	NA	NA	NA	NA
AXX66690.1|1411025_1412348_-	O-acetylhomoserine aminocarboxypropyltransferase	NA	NA	NA	NA	NA
AXX66691.1|1412347_1413502_-	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA	NA
AXX66692.1|1414766_1415765_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	1457320	1517652	4920509	transposase	uncultured_Caudovirales_phage(33.33%)	49	NA	NA
AXX66730.1|1457320_1458319_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX66731.1|1458319_1458499_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69297.1|1458670_1459375_+	HAD family hydrolase	NA	NA	NA	NA	NA
AXX66732.1|1459693_1459882_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66733.1|1459912_1460137_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66734.1|1460136_1462209_-	carbon starvation protein A	NA	NA	NA	NA	NA
AXX66735.1|1462440_1463298_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69298.1|1464333_1466736_+	type IV secretion protein Rhs	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	29.2	4.6e-41
AXX66736.1|1466790_1467651_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66737.1|1467611_1468298_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66738.1|1468287_1469700_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66739.1|1469709_1472136_+	type IV secretion protein Rhs	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	29.0	2.4e-37
AXX66740.1|1472190_1473051_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66741.1|1473011_1473698_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66742.1|1474161_1474395_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXX66743.1|1475383_1475971_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69299.1|1476191_1476758_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66744.1|1476754_1479163_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66745.1|1479507_1479969_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66746.1|1480215_1481106_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66747.1|1481283_1481559_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69300.1|1481873_1482587_-	endonuclease V	NA	NA	NA	NA	NA
AXX66748.1|1482690_1483440_+	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
AXX66749.1|1483800_1484052_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66750.1|1484384_1486442_+	peptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	31.6	1.2e-79
AXX66751.1|1487147_1488221_+	cardiolipin synthase	NA	NA	NA	NA	NA
AXX69301.1|1488389_1489511_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AXX66752.1|1489525_1490332_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXX66753.1|1490336_1491620_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AXX66754.1|1491646_1492162_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
AXX66755.1|1492172_1494329_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	62.1	2.9e-10
AXX66756.1|1494396_1496394_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
AXX66757.1|1496412_1496742_-	anti-anti-sigma factor	NA	NA	NA	NA	NA
AXX66758.1|1497231_1500696_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
AXX66759.1|1500768_1500951_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66760.1|1501098_1501641_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXX69302.1|1502052_1502961_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AXX66761.1|1503710_1504679_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX66762.1|1505408_1506128_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXX66763.1|1507338_1508151_-	peptidase C1	NA	NA	NA	NA	NA
AXX66764.1|1508886_1509270_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66765.1|1509392_1510562_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.5	1.1e-96
AXX66766.1|1510556_1511615_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	42.6	4.1e-71
AXX69303.1|1511675_1512488_-	peptidase C1	NA	NA	NA	NA	NA
AXX66767.1|1513003_1513387_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66768.1|1513572_1514736_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	2.6e-98
AXX66769.1|1514766_1515579_-	peptidase C1	NA	NA	NA	NA	NA
AXX66770.1|1515809_1516397_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
AXX66771.1|1516695_1517652_-|transposase	IS30 family transposase IS1112a	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
>prophage 10
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	1527267	1596933	4920509	tRNA,transposase	Bacillus_virus(13.33%)	53	NA	NA
AXX66780.1|1527267_1528098_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AXX66781.1|1528159_1528927_-	DNAase	NA	NA	NA	NA	NA
AXX66782.1|1528926_1529142_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66783.1|1529287_1530079_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66784.1|1530224_1531400_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXX66785.1|1533633_1534272_+	glutathione S-transferase	NA	NA	NA	NA	NA
AXX66786.1|1534447_1536388_+	asparagine synthetase B	NA	A0A1B1ISV2	uncultured_Mediterranean_phage	30.5	4.4e-26
AXX66787.1|1536604_1537159_+	NADPH-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	35.3	1.1e-19
AXX66788.1|1537380_1538811_+	replicative DNA helicase	NA	O80281	Escherichia_phage	53.4	8.5e-120
AXX66789.1|1538913_1540332_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0S949	Catovirus	31.7	3.3e-47
AXX69305.1|1540559_1540739_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66790.1|1540748_1541474_+	OmpA family lipoprotein	NA	G3M9Z0	Bacillus_virus	33.9	1.4e-09
AXX66791.1|1541650_1541983_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AXX66792.1|1542034_1542991_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.7	2.2e-39
AXX66793.1|1543234_1545616_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX66794.1|1546006_1547842_-	ligand-gated channel	NA	NA	NA	NA	NA
AXX66795.1|1547822_1548008_-	outer membrane hemin receptor	NA	NA	NA	NA	NA
AXX66796.1|1548244_1548655_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66797.1|1548954_1549137_+	ribosomal small subunit protein bTHX	NA	NA	NA	NA	NA
AXX66798.1|1549269_1550310_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AXX66799.1|1550382_1551828_-	chloride channel protein	NA	A0A1X9I5Z9	Streptococcus_phage	31.5	4.9e-14
AXX66800.1|1551954_1553253_-	alkaline phosphatase family protein	NA	NA	NA	NA	NA
AXX66801.1|1553509_1554055_-	cysteine methyltransferase	NA	A0A1S5V092	Saudi_moumouvirus	51.9	4.1e-14
AXX66802.1|1554051_1555515_-	DNA methylase	NA	NA	NA	NA	NA
AXX66803.1|1555737_1556583_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69306.1|1556593_1556899_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66804.1|1556975_1557230_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66805.1|1557632_1558166_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66806.1|1558191_1558593_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66807.1|1558941_1559184_-	RNA-binding protein	NA	NA	NA	NA	NA
AXX66808.1|1559905_1560202_-	RNA polymerase subunit sigma-70	NA	NA	NA	NA	NA
AXX66809.1|1560551_1562456_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	35.7	2.5e-58
AXX66810.1|1562719_1565116_+	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	30.2	3.8e-11
AXX66811.1|1565265_1565988_+	23S rRNA pseudouridine synthase F	NA	NA	NA	NA	NA
AXX66812.1|1566175_1567123_-	EamA family transporter	NA	NA	NA	NA	NA
AXX66813.1|1568938_1569439_+	ribonuclease activity regulator protein RraA	NA	NA	NA	NA	NA
AXX66814.1|1569380_1571057_+	serine hydrolase	NA	NA	NA	NA	NA
AXX66815.1|1571203_1572469_+	cation/H(+) antiporter	NA	NA	NA	NA	NA
AXX66816.1|1572527_1573721_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	23.9	5.2e-22
AXX66817.1|1573717_1574407_-	DNA-binding response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	28.3	3.6e-07
AXX66818.1|1574512_1575982_+	outer membrane channel protein	NA	NA	NA	NA	NA
AXX66819.1|1576001_1576838_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66820.1|1576863_1577967_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXX66821.1|1577963_1581020_+	acriflavin resistance protein	NA	NA	NA	NA	NA
AXX66822.1|1581085_1581676_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66823.1|1581807_1583640_+	multidrug ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.3	1.2e-30
AXX69307.1|1583715_1584141_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX66824.1|1584059_1584479_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX66825.1|1584521_1585904_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX66826.1|1587138_1591629_+	type IV secretion protein Rhs	NA	NA	NA	NA	NA
AXX66827.1|1592168_1593137_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.5e-99
AXX66828.1|1595426_1595795_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66829.1|1595964_1596933_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
>prophage 11
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	1697655	1741976	4920509	tRNA,transposase	Acanthocystis_turfacea_Chlorella_virus(11.11%)	36	NA	NA
AXX66894.1|1697655_1699422_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
AXX66895.1|1699933_1700461_+	N-acetyltransferase	NA	NA	NA	NA	NA
AXX66896.1|1700560_1701238_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXX66897.1|1701327_1702056_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXX66898.1|1702170_1702695_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AXX66899.1|1702852_1703437_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AXX66900.1|1703636_1705544_+	potassium transporter Kup	NA	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	34.1	3.4e-79
AXX66901.1|1705672_1706710_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	28.2	2.7e-06
AXX66902.1|1706762_1707221_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AXX66903.1|1707232_1708012_+	protein TolQ	NA	NA	NA	NA	NA
AXX66904.1|1708168_1708618_+	protein TolR	NA	NA	NA	NA	NA
AXX66905.1|1708607_1709648_+	protein TolA	NA	NA	NA	NA	NA
AXX66906.1|1709907_1711227_+	protein TolB	NA	NA	NA	NA	NA
AXX66907.1|1711284_1711803_+	peptidoglycan-associated lipoprotein	NA	NA	NA	NA	NA
AXX66908.1|1711809_1712628_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AXX66909.1|1712670_1713354_+	7-carboxy-7-deazaguanine synthase QueE	NA	J9PV61	Bacillus_phage	39.5	1.5e-37
AXX66910.1|1714587_1715298_-	RNA-binding protein	NA	NA	NA	NA	NA
AXX66911.1|1715532_1715739_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66912.1|1720646_1721882_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX69317.1|1721932_1722358_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX66913.1|1722276_1722696_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX66914.1|1722762_1723248_-	hypothetical protein	NA	K4I1H9	Acidithiobacillus_phage	64.0	3.3e-39
AXX66915.1|1723353_1724322_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX66916.1|1725677_1726352_+	7-cyano-7-deazaguanine synthase	NA	A0A088F6S9	Vibrio_phage	34.7	6.4e-25
AXX66917.1|1726982_1727387_-	response regulator	NA	NA	NA	NA	NA
AXX66918.1|1727465_1727963_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66919.1|1728101_1729898_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	2.6e-81
AXX66920.1|1730002_1730239_+	hypothetical protein	NA	NA	NA	NA	NA
AXX66921.1|1730454_1731000_-	DNA starvation/stationary phase protection protein	NA	A0A2H4N7L5	Lake_Baikal_phage	32.4	1.5e-16
AXX66922.1|1731101_1735223_+	ATP-dependent RNA helicase HrpA	NA	A0A1V0SDF7	Indivirus	28.5	5.6e-47
AXX66923.1|1735443_1738086_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX69318.1|1738187_1738412_-	glucose kinase	NA	NA	NA	NA	NA
AXX66924.1|1738455_1738728_-	hypothetical protein	NA	NA	NA	NA	NA
AXX66925.1|1739527_1741042_-	PhoPQ-regulated protein	NA	NA	NA	NA	NA
AXX66926.1|1741212_1741632_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69319.1|1741550_1741976_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	2025652	2103726	4920509	coat,protease,transposase	Streptococcus_phage(16.67%)	59	NA	NA
AXX67126.1|2025652_2026687_-|coat	spore coat protein U	coat	NA	NA	NA	NA
AXX67127.1|2026683_2029035_-	fimbriae usher protein	NA	NA	NA	NA	NA
AXX67128.1|2029051_2029822_-	pilus assembly protein	NA	NA	NA	NA	NA
AXX69337.1|2029830_2030355_-	adhesin	NA	NA	NA	NA	NA
AXX67129.1|2030674_2031451_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
AXX67130.1|2031447_2034057_+	bifunctional uridylyltransferase/uridylyl-removing protein	NA	NA	NA	NA	NA
AXX67131.1|2034073_2035270_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AXX67132.1|2035732_2036089_+	arsenate reductase	NA	NA	NA	NA	NA
AXX67133.1|2036085_2036586_+	GNAT family N-acetyltransferase	NA	A0A1X9I687	Streptococcus_phage	41.7	2.3e-27
AXX67134.1|2036590_2037721_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AXX67135.1|2038015_2039710_+	asparagine synthase B	NA	E5ERH5	Ostreococcus_lucimarinus_virus	38.6	2.5e-86
AXX67136.1|2039778_2040831_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67137.1|2041046_2041259_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67138.1|2041261_2043388_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXX69338.1|2043950_2046368_-	penicillin acylase	NA	NA	NA	NA	NA
AXX67139.1|2046514_2047000_+	bacterioferritin	NA	NA	NA	NA	NA
AXX67140.1|2047455_2049699_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	34.8	5.0e-82
AXX69339.1|2050728_2051169_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXX67141.1|2051165_2052683_+	multidrug RND transporter	NA	NA	NA	NA	NA
AXX67142.1|2052693_2053887_+	multidrug transporter	NA	NA	NA	NA	NA
AXX67143.1|2053893_2055474_+	MFS transporter	NA	NA	NA	NA	NA
AXX67144.1|2055524_2056259_+	MlrB protein	NA	NA	NA	NA	NA
AXX69340.1|2056255_2056681_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX67145.1|2057214_2057463_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67146.1|2060974_2061238_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67147.1|2061480_2062473_+	glycosyl transferase	NA	NA	NA	NA	NA
AXX69341.1|2062509_2064426_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
AXX67148.1|2064823_2065513_-	HNH endonuclease	NA	F5B475	Synechococcus_phage	40.2	5.4e-11
AXX67149.1|2065778_2067572_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXX67150.1|2067609_2068086_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67151.1|2068798_2069302_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	42.6	3.4e-23
AXX67152.1|2069362_2069794_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AXX67153.1|2069807_2070083_+	RnfH family protein	NA	NA	NA	NA	NA
AXX67154.1|2070429_2070825_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67155.1|2070929_2071340_+	transcriptional repressor	NA	NA	NA	NA	NA
AXX67156.1|2071782_2073447_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AXX67157.1|2073584_2074616_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
AXX67158.1|2074716_2075235_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AXX67159.1|2075376_2077302_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	51.0	7.6e-148
AXX67160.1|2077461_2078592_+	molecular chaperone DnaJ	NA	Q8QNB4	Ectocarpus_siliculosus_virus	30.0	1.4e-24
AXX67161.1|2079120_2080029_+	pyridoxal kinase	NA	NA	NA	NA	NA
AXX69342.1|2080025_2081147_+	prephenate dehydrogenase	NA	NA	NA	NA	NA
AXX67162.1|2081516_2082911_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67163.1|2083170_2084097_-	multidrug transporter	NA	NA	NA	NA	NA
AXX67164.1|2084226_2084832_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXX67165.1|2085170_2086940_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.7	8.0e-59
AXX69343.1|2086936_2087539_-	IMPACT family protein	NA	A0A1X9I5T8	Streptococcus_phage	41.2	1.1e-15
AXX67166.1|2087797_2088391_-	Rossman fold protein, TIGR00730 family	NA	A0A2I2L3F0	Orpheovirus	27.5	3.5e-11
AXX67167.1|2088589_2090026_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.1	1.3e-38
AXX67168.1|2090267_2091470_-	dihydrolipoamide succinyltransferase	NA	NA	NA	NA	NA
AXX67169.1|2091512_2094341_-	2-oxoglutarate dehydrogenase subunit E1	NA	NA	NA	NA	NA
AXX67170.1|2094521_2095454_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXX67171.1|2095450_2096950_-	transcriptional regulator	NA	NA	NA	NA	NA
AXX69344.1|2097287_2097551_+|protease	serine protease	protease	NA	NA	NA	NA
AXX67172.1|2097830_2098331_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67173.1|2098572_2099940_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	48.6	3.3e-113
AXX67174.1|2101149_2101821_-	hemolysin	NA	NA	NA	NA	NA
AXX67175.1|2102962_2103382_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69345.1|2103300_2103726_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	2136274	2183308	4920509	tRNA,transposase	Ralstonia_phage(40.0%)	28	NA	NA
AXX67203.1|2136274_2137243_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
AXX67204.1|2138595_2139594_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX67205.1|2139643_2139895_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69349.1|2140005_2141190_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
AXX67206.1|2141244_2142720_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	66.8	2.9e-99
AXX67207.1|2143041_2143224_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67208.1|2143372_2144572_-	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AXX67209.1|2145432_2146401_+|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX67210.1|2146511_2146694_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67211.1|2147671_2148670_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX67212.1|2150899_2151898_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX67213.1|2152666_2152894_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67214.1|2152896_2153865_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX67215.1|2154688_2155045_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69350.1|2156330_2156798_-	cell envelope biogenesis protein TonB	NA	NA	NA	NA	NA
AXX67216.1|2157158_2157818_-	energy transducer TonB	NA	NA	NA	NA	NA
AXX69351.1|2157929_2159279_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.6	4.5e-94
AXX67217.1|2160588_2161986_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67218.1|2162198_2163167_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	5.6e-99
AXX67219.1|2163218_2163815_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
AXX67220.1|2163914_2164928_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXX67221.1|2166297_2169813_-	Avirulence protein AvrBs3	NA	NA	NA	NA	NA
AXX67222.1|2170036_2170336_-	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	92.4	6.4e-46
AXX67223.1|2170339_2170534_-	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	82.3	3.9e-20
AXX67224.1|2170802_2174405_-	Avirulence protein AvrBs3	NA	NA	NA	NA	NA
AXX67225.1|2175956_2177432_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	67.1	5.4e-101
AXX67226.1|2177572_2181598_-	avirulence protein	NA	NA	NA	NA	NA
AXX69352.1|2181886_2183308_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	2272835	2332949	4920509	tRNA,transposase	Xanthomonas_phage(50.0%)	58	NA	NA
AXX67299.1|2272835_2274236_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67300.1|2274777_2275536_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AXX67301.1|2275668_2276283_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AXX67302.1|2276338_2277565_+	class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE	NA	NA	NA	NA	NA
AXX67303.1|2277561_2278638_+	class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC	NA	NA	NA	NA	NA
AXX67304.1|2278752_2278950_+	stress-responsive transcriptional regulator	NA	NA	NA	NA	NA
AXX69358.1|2279090_2279435_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67305.1|2279392_2280604_-	amino acid oxidase	NA	NA	NA	NA	NA
AXX69359.1|2280793_2281021_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67306.1|2281123_2283484_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
AXX67307.1|2284805_2285372_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXX67308.1|2285368_2286595_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXX67309.1|2286715_2287981_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AXX67310.1|2287961_2288699_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AXX67311.1|2288839_2290069_-	MFS transporter	NA	NA	NA	NA	NA
AXX67312.1|2290165_2291122_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.8	2.4e-41
AXX67313.1|2291681_2291816_-	aspartate racemase	NA	NA	NA	NA	NA
AXX67314.1|2291812_2291971_-	pyridoxal phosphate biosynthetic protein	NA	NA	NA	NA	NA
AXX67315.1|2292006_2292918_-	EamA family transporter	NA	NA	NA	NA	NA
AXX67316.1|2292911_2293964_-	UDP-N-acetylenolpyruvoylglucosamine reductase	NA	NA	NA	NA	NA
AXX67317.1|2293960_2295016_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AXX67318.1|2295021_2295795_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXX67319.1|2295791_2296076_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67320.1|2296664_2298197_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AXX67321.1|2298458_2298821_+	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
AXX67322.1|2299500_2302008_+	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA	NA
AXX67323.1|2302004_2302973_+	homoserine kinase	NA	NA	NA	NA	NA
AXX67324.1|2303500_2303740_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67325.1|2303740_2304052_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67326.1|2303976_2305185_+	tannase	NA	NA	NA	NA	NA
AXX69360.1|2305908_2306223_-	ethyl tert-butyl ether degradation protein EthD	NA	NA	NA	NA	NA
AXX67327.1|2306384_2307689_+	threonine synthase	NA	NA	NA	NA	NA
AXX67328.1|2307791_2308535_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67329.1|2309799_2311212_+|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L6G5	Tupanvirus	28.2	3.0e-40
AXX67330.1|2312829_2313156_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXX67331.1|2313165_2314080_+	ATP phosphoribosyltransferase	NA	NA	NA	NA	NA
AXX67332.1|2314076_2315372_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
AXX67333.1|2315368_2316460_+	histidinol-phosphate transaminase	NA	NA	NA	NA	NA
AXX67334.1|2316456_2317584_+	bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase	NA	NA	NA	NA	NA
AXX67335.1|2317580_2318183_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
AXX67336.1|2318179_2318914_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA	NA
AXX67337.1|2318907_2319684_+	imidazole glycerol phosphate synthase cyclase subunit	NA	NA	NA	NA	NA
AXX67338.1|2319673_2320294_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA	NA
AXX67339.1|2320382_2320790_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67340.1|2320879_2323696_-	avirulence protein	NA	NA	NA	NA	NA
AXX67341.1|2323836_2324136_-	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	91.3	1.9e-45
AXX67342.1|2324139_2324334_-	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	82.3	3.9e-20
AXX67343.1|2324601_2326659_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67344.1|2327928_2328030_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67345.1|2328653_2328836_-	antitoxin	NA	NA	NA	NA	NA
AXX67346.1|2328957_2329170_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67347.1|2329311_2329758_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69361.1|2329523_2330102_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX67348.1|2330503_2330929_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67349.1|2331325_2331568_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67350.1|2331542_2332055_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67351.1|2332185_2332605_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69362.1|2332523_2332949_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	2342774	2400630	4920509	transposase	Xanthomonas_phage(16.67%)	50	NA	NA
AXX67357.1|2342774_2343221_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69363.1|2342986_2343565_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX67358.1|2343795_2343990_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	82.3	3.9e-20
AXX67359.1|2343993_2344293_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	91.3	1.9e-45
AXX67360.1|2344517_2348534_+	avirulence protein	NA	NA	NA	NA	NA
AXX67361.1|2348707_2348929_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67362.1|2348925_2349597_+	hypothetical protein	NA	A0A0P0I4A4	Acinetobacter_phage	38.9	5.2e-27
AXX67363.1|2350851_2351808_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.6	2.1e-42
AXX67364.1|2352222_2353191_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX67365.1|2353302_2354301_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX67366.1|2354278_2358379_-	type IV secretion protein Rhs	NA	NA	NA	NA	NA
AXX69364.1|2358687_2359872_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
AXX67367.1|2359922_2360822_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.1	2.8e-36
AXX67368.1|2360988_2361495_+	glyoxalase	NA	NA	NA	NA	NA
AXX67369.1|2361969_2362602_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AXX67370.1|2362601_2364458_-	excinuclease ABC subunit C	NA	NA	NA	NA	NA
AXX67371.1|2364454_2365873_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67372.1|2365896_2366361_-	phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AXX67373.1|2366357_2367137_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AXX67374.1|2367428_2368469_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AXX67375.1|2368465_2370235_-	lipid A export ATP-binding/permease MsbA	NA	W8CYL7	Bacillus_phage	28.0	9.4e-52
AXX67376.1|2370231_2370696_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AXX67377.1|2370699_2371362_-	biopolymer transporter ExbB	NA	NA	NA	NA	NA
AXX67378.1|2371390_2373799_-	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA	NA
AXX67379.1|2374019_2375018_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX67380.1|2376228_2376411_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67381.1|2376411_2377146_-	lipoprotein-releasing system ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	34.5	1.0e-31
AXX67382.1|2377138_2378380_-	ABC transporter permease	NA	NA	NA	NA	NA
AXX67383.1|2378403_2378856_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67384.1|2378806_2379055_-	succinate dehydrogenase assembly factor 2 family protein	NA	NA	NA	NA	NA
AXX67385.1|2379165_2379948_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
AXX67386.1|2379964_2380174_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67387.1|2380177_2381968_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
AXX67388.1|2382002_2382389_-	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA	NA
AXX67389.1|2382385_2382781_-	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA	NA
AXX67390.1|2382840_2383107_-	DUF1674 domain-containing protein	NA	NA	NA	NA	NA
AXX67391.1|2383050_2383923_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
AXX67392.1|2384051_2385149_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	30.1	2.2e-22
AXX67393.1|2385580_2387011_+	glucose-6-phosphate dehydrogenase	NA	A0A222YYZ2	Synechococcus_phage	34.5	2.2e-67
AXX67394.1|2387007_2388015_+	glucokinase	NA	NA	NA	NA	NA
AXX67395.1|2388011_2388731_+	6-phosphogluconolactonase	NA	NA	NA	NA	NA
AXX67396.1|2388833_2390750_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
AXX67397.1|2390805_2391465_+	2-dehydro-3-deoxyphosphogluconate aldolase	NA	NA	NA	NA	NA
AXX67398.1|2393091_2393295_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67399.1|2393291_2393723_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67400.1|2394310_2394691_+	response regulator	NA	NA	NA	NA	NA
AXX67401.1|2394905_2398301_+	histidine kinase	NA	A0A1V0SGX0	Hokovirus	27.8	2.9e-25
AXX67402.1|2398511_2398721_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67403.1|2399866_2400286_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69365.1|2400204_2400630_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	2497175	2601566	4920509	tRNA,transposase	uncultured_Mediterranean_phage(33.33%)	91	NA	NA
AXX69376.1|2497175_2497439_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AXX67456.1|2497571_2500268_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.2	1.7e-108
AXX67457.1|2500478_2501543_-	methylthioribose-1-phosphate isomerase	NA	NA	NA	NA	NA
AXX67458.1|2501743_2502430_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67459.1|2502539_2503502_-	EF-P lysine aminoacylase GenX	NA	A0A1V0SAC0	Catovirus	27.8	8.0e-21
AXX67460.1|2503498_2506024_-	DNA ligase (NAD(+)) LigA	NA	A0A0K2QQN8	Ralstonia_phage	39.8	3.0e-120
AXX67461.1|2506879_2507611_-	cell division protein ZipA	NA	NA	NA	NA	NA
AXX67462.1|2507667_2511171_-	chromosome partition protein Smc	NA	NA	NA	NA	NA
AXX67463.1|2511380_2511830_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
AXX67464.1|2512082_2512313_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
AXX67465.1|2512324_2512756_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
AXX69377.1|2513111_2513450_-	iron-sulfur cluster assembly accessory protein	NA	NA	NA	NA	NA
AXX67466.1|2513656_2515051_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	39.5	7.6e-81
AXX67467.1|2515052_2515310_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67468.1|2515306_2515612_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67469.1|2515608_2515935_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67470.1|2516661_2517324_+	carbonic anhydrase	NA	NA	NA	NA	NA
AXX69378.1|2517412_2517943_+	3-hydroxyanthranilate 3,4-dioxygenase	NA	NA	NA	NA	NA
AXX67471.1|2520166_2521438_+	kynureninase	NA	NA	NA	NA	NA
AXX67472.1|2521609_2522977_+	kynurenine 3-monooxygenase	NA	NA	NA	NA	NA
AXX67473.1|2523280_2524726_+	exodeoxyribonuclease I	NA	NA	NA	NA	NA
AXX67474.1|2524722_2525409_+	TIGR02453 family protein	NA	NA	NA	NA	NA
AXX67475.1|2525381_2526401_+	oxidoreductase	NA	NA	NA	NA	NA
AXX67476.1|2526442_2527003_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67477.1|2527023_2527980_-	5'-nucleotidase	NA	NA	NA	NA	NA
AXX69379.1|2528147_2528924_-	NAD(+) kinase	NA	NA	NA	NA	NA
AXX67478.1|2529407_2531543_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA	NA
AXX67479.1|2531539_2531731_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67480.1|2533505_2534012_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXX67481.1|2534052_2534580_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXX67482.1|2534576_2535068_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AXX67483.1|2535091_2535667_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
AXX67484.1|2535743_2536697_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67485.1|2536785_2537658_-	sulfurtransferase	NA	NA	NA	NA	NA
AXX67486.1|2537654_2538500_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
AXX67487.1|2538612_2539311_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AXX67488.1|2539474_2540257_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXX67489.1|2540265_2540646_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67490.1|2540642_2541353_+	endonuclease III	NA	NA	NA	NA	NA
AXX67491.1|2542663_2543212_-	carbonate dehydratase	NA	NA	NA	NA	NA
AXX67492.1|2543383_2544352_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX67493.1|2544498_2544885_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX67494.1|2544956_2546192_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX67495.1|2546195_2546609_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX67496.1|2546755_2547076_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67497.1|2547415_2548666_+	porin	NA	NA	NA	NA	NA
AXX67498.1|2548854_2549874_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4SNR3	Cyanophage	38.7	1.6e-48
AXX67499.1|2550061_2551153_+	phosphate ABC transporter substrate-binding protein PstS	NA	E3SKK5	Synechococcus_phage	39.7	1.1e-47
AXX67500.1|2551265_2552240_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AXX67501.1|2552239_2553109_+	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AXX67502.1|2553131_2553962_+	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.6	5.5e-18
AXX67503.1|2554090_2554801_+	phosphate transport system regulatory protein PhoU	NA	NA	NA	NA	NA
AXX67504.1|2554933_2555341_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67505.1|2555624_2556260_+	ribonuclease T	NA	NA	NA	NA	NA
AXX69380.1|2556201_2557650_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67506.1|2557886_2558948_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX69381.1|2558998_2560183_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
AXX67507.1|2560378_2561752_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67508.1|2564439_2564802_+	recombinase	NA	NA	NA	NA	NA
AXX67509.1|2564882_2565851_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	30.3	1.4e-28
AXX67510.1|2565945_2567790_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AXX67511.1|2567986_2568340_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
AXX67512.1|2568471_2569617_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	46.2	2.2e-86
AXX69382.1|2569686_2570757_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AXX67513.1|2570950_2571382_-	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AXX67514.1|2571505_2573002_+	lysine 6-aminotransferase	NA	NA	NA	NA	NA
AXX67515.1|2572961_2573276_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67516.1|2573346_2574054_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69383.1|2574444_2574690_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67517.1|2574948_2575173_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67518.1|2577395_2578517_-	phytase	NA	NA	NA	NA	NA
AXX67519.1|2578513_2580760_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX67520.1|2580789_2581257_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX69384.1|2581407_2582040_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AXX67521.1|2582436_2582856_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69385.1|2582774_2583200_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX67522.1|2583479_2584511_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXX67523.1|2584517_2586311_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AXX67524.1|2586307_2586592_-	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	57.0	1.4e-18
AXX69386.1|2586582_2586765_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67525.1|2586823_2587321_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67526.1|2587367_2587874_-	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	41.1	4.8e-25
AXX69387.1|2587870_2588491_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
AXX67527.1|2588731_2590636_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.8	1.0e-112
AXX67528.1|2591803_2593198_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67529.1|2593431_2594589_+	molybdopterin biosynthesis protein MoeB	NA	NA	NA	NA	NA
AXX67530.1|2594832_2595831_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX67531.1|2597483_2597690_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX67532.1|2599823_2600792_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX67533.1|2601059_2601299_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67534.1|2601368_2601566_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 17
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	2722816	2824325	4920509	tRNA,transposase,protease	Ralstonia_phage(31.58%)	80	NA	NA
AXX67635.1|2722816_2723785_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
AXX67636.1|2723879_2724410_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67637.1|2724448_2729689_-	type IV secretion protein Rhs	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	39.8	1.6e-09
AXX67638.1|2729718_2730468_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67639.1|2730619_2731588_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX67640.1|2731598_2733563_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67641.1|2733651_2734620_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX67642.1|2736385_2736577_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67643.1|2744857_2745250_+	cytochrome C	NA	NA	NA	NA	NA
AXX67644.1|2745258_2745720_+	cytochrome C biogenesis protein CcsA	NA	NA	NA	NA	NA
AXX67645.1|2746224_2746485_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67646.1|2746560_2746803_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67647.1|2747045_2747231_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67648.1|2747273_2747480_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67649.1|2748209_2749208_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX67650.1|2749214_2750360_+	DDE endonuclease	NA	NA	NA	NA	NA
AXX67651.1|2750484_2751453_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	5.6e-99
AXX67652.1|2751841_2753527_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	25.2	2.1e-16
AXX69392.1|2753523_2755260_-	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	26.2	1.1e-15
AXX67653.1|2755776_2756733_-|transposase	IS30 family transposase IS1112a	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
AXX67654.1|2756892_2757861_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX67655.1|2758617_2758728_+	cyd operon protein YbgT	NA	NA	NA	NA	NA
AXX67656.1|2758948_2760214_+	MFS transporter	NA	NA	NA	NA	NA
AXX67657.1|2760194_2762108_-	glutaryl-7-ACA acylase	NA	NA	NA	NA	NA
AXX67658.1|2762475_2763720_-	gamma-glutamyl-phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	45.1	2.5e-91
AXX67659.1|2763884_2765039_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	37.8	1.2e-47
AXX67660.1|2765052_2765313_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67661.1|2765312_2765678_-	cupin	NA	NA	NA	NA	NA
AXX67662.1|2765677_2766973_-	argininosuccinate lyase	NA	NA	NA	NA	NA
AXX67663.1|2767096_2768047_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
AXX67664.1|2768659_2770003_-	acetylglutamate kinase	NA	NA	NA	NA	NA
AXX67665.1|2770042_2771143_-	acetylornithine deacetylase	NA	NA	NA	NA	NA
AXX67666.1|2771148_2771601_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXX67667.1|2771842_2773084_-	argininosuccinate synthase	NA	NA	NA	NA	NA
AXX67668.1|2773155_2774181_-	acetylornithine carbamoyltransferase	NA	NA	NA	NA	NA
AXX67669.1|2774493_2774988_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67670.1|2775164_2776589_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.5	1.1e-42
AXX67671.1|2777086_2777524_+	Fe-S cluster assembly protein SufE	NA	NA	NA	NA	NA
AXX67672.1|2777520_2778771_+	MFS transporter	NA	NA	NA	NA	NA
AXX67673.1|2778838_2779900_-	peptidase S41	NA	NA	NA	NA	NA
AXX67674.1|2780042_2781083_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
AXX67675.1|2781167_2781455_+	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
AXX67676.1|2781451_2782801_+	dihydroorotase	NA	NA	NA	NA	NA
AXX67677.1|2782800_2783640_+	peptidase M23	NA	A0A075BS18	Microcystis_phage	41.2	2.4e-13
AXX67678.1|2784538_2784958_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69393.1|2784876_2785302_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX67679.1|2785327_2785591_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67680.1|2785962_2786451_-	general stress protein	NA	NA	NA	NA	NA
AXX67681.1|2786674_2788093_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67682.1|2788130_2789099_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	5.6e-99
AXX67683.1|2790977_2792159_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AXX67684.1|2792226_2792466_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67685.1|2793747_2795418_+	polygalacturonase	NA	NA	NA	NA	NA
AXX67686.1|2795634_2796324_-	phytoene/squalene synthase family protein	NA	NA	NA	NA	NA
AXX67687.1|2796352_2797057_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AXX67688.1|2797130_2797850_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
AXX67689.1|2797880_2799218_-	N-ethylammeline chlorohydrolase	NA	NA	NA	NA	NA
AXX69394.1|2799237_2800041_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67690.1|2800232_2800799_-	elongation factor P	NA	NA	NA	NA	NA
AXX67691.1|2800900_2801929_+	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA	NA
AXX67692.1|2802147_2804265_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AXX67693.1|2804261_2805191_-	metal-binding protein	NA	NA	NA	NA	NA
AXX67694.1|2805242_2806007_-	RNA methyltransferase	NA	NA	NA	NA	NA
AXX67695.1|2806125_2806959_+	inositol monophosphatase	NA	NA	NA	NA	NA
AXX67696.1|2807211_2807823_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	69.8	1.1e-79
AXX67697.1|2808077_2808518_+	ribonuclease	NA	NA	NA	NA	NA
AXX67698.1|2808514_2808940_+	barnase inhibitor	NA	NA	NA	NA	NA
AXX67699.1|2809388_2811284_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	26.8	1.8e-48
AXX67700.1|2811373_2812750_+	ATP-dependent RNA helicase DbpA	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	31.4	1.6e-54
AXX67701.1|2812852_2813413_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.2	1.6e-29
AXX67702.1|2813510_2815067_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67703.1|2815350_2816226_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXX67704.1|2816426_2817125_-	glutathione S-transferase	NA	NA	NA	NA	NA
AXX67705.1|2817295_2817505_-	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	62.3	2.8e-16
AXX67706.1|2817774_2818260_+	DUF188 domain-containing protein	NA	NA	NA	NA	NA
AXX67707.1|2818330_2818879_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67708.1|2818875_2820057_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67709.1|2820280_2822350_+	PAS domain S-box protein	NA	NA	NA	NA	NA
AXX67710.1|2822449_2823328_-|protease	protease HtpX	protease	NA	NA	NA	NA
AXX67711.1|2823425_2824325_+|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
>prophage 18
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	2833817	2911181	4920509	tRNA,transposase	Bacillus_phage(16.67%)	59	NA	NA
AXX67719.1|2833817_2834885_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AXX69396.1|2834999_2835425_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX67720.1|2835343_2835763_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX67721.1|2835846_2837184_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	36.2	1.3e-37
AXX67722.1|2837479_2838742_-	virulence factor	NA	NA	NA	NA	NA
AXX67723.1|2840022_2841858_-	serine/threonine kinase	NA	A0A075BSL8	Microcystis_phage	33.1	5.6e-23
AXX67724.1|2842129_2843221_+	ribonuclease D	NA	NA	NA	NA	NA
AXX67725.1|2843296_2843686_-	ATP-dependent DNA ligase	NA	NA	NA	NA	NA
AXX67726.1|2843549_2843900_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67727.1|2844313_2844715_+	histone-like nucleoid-structuring protein	NA	NA	NA	NA	NA
AXX67728.1|2845221_2845356_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX69397.1|2845578_2845758_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67729.1|2846359_2846650_-	plasmid stabilization protein	NA	NA	NA	NA	NA
AXX67730.1|2846637_2846916_-	CopG family transcriptional regulator	NA	NA	NA	NA	NA
AXX69398.1|2847400_2847589_-	plasmid mobilization protein	NA	NA	NA	NA	NA
AXX69399.1|2848361_2849546_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
AXX67731.1|2850093_2851092_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX67732.1|2852046_2853342_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69400.1|2855656_2856001_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67733.1|2856211_2856538_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67734.1|2856570_2857011_-	stringent starvation protein B	NA	A0A1S5R3H3	Pseudomonas_phage	46.2	9.3e-25
AXX67735.1|2857089_2857725_-	stringent starvation protein A	NA	NA	NA	NA	NA
AXX67736.1|2858118_2858877_-	cytochrome c1	NA	NA	NA	NA	NA
AXX67737.1|2858869_2860129_-	cytochrome b	NA	NA	NA	NA	NA
AXX67738.1|2860128_2860773_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AXX67739.1|2861302_2862289_-	transglycosylase	NA	A0A0H3V0Q1	Geobacillus_virus	56.0	1.3e-29
AXX67740.1|2864224_2865679_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AXX67741.1|2866102_2867089_+	phosphate starvation-inducible protein PhoH	NA	W8D063	Erwinia_phage	47.7	2.5e-46
AXX67742.1|2867500_2868163_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67743.1|2868217_2868703_+	endoribonuclease YbeY	NA	NA	NA	NA	NA
AXX67744.1|2868702_2869221_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67745.1|2869315_2870194_+	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
AXX69401.1|2870208_2871471_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67746.1|2871486_2872488_+	magnesium transporter CorA	NA	NA	NA	NA	NA
AXX69402.1|2872639_2874004_-	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AXX69403.1|2874258_2874669_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67747.1|2874824_2875583_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AXX67748.1|2875670_2876033_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67749.1|2875968_2877216_-	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.3	1.2e-24
AXX67750.1|2877361_2878855_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67751.1|2878859_2880446_-	EmrB/QacA family drug resistance transporter	NA	NA	NA	NA	NA
AXX67752.1|2880442_2881645_-	multidrug ABC transporter permease	NA	NA	NA	NA	NA
AXX67753.1|2883773_2885159_-	glutamine synthetase	NA	NA	NA	NA	NA
AXX67754.1|2886066_2887446_+	glutamine synthetase	NA	NA	NA	NA	NA
AXX67755.1|2887445_2888762_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXX67756.1|2888844_2890143_+	diguanylate cyclase response regulator	NA	A0A127AWB9	Bacillus_phage	36.4	2.7e-19
AXX67757.1|2890450_2891731_-	MFS transporter	NA	NA	NA	NA	NA
AXX67758.1|2892036_2892315_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67759.1|2892304_2894653_-	CbbBc protein	NA	NA	NA	NA	NA
AXX67760.1|2894649_2895495_-	sulfurtransferase FdhD	NA	NA	NA	NA	NA
AXX67761.1|2895501_2897241_-	MFS transporter	NA	NA	NA	NA	NA
AXX67762.1|2897383_2897716_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67763.1|2897770_2899123_+	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
AXX69404.1|2899183_2902321_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67764.1|2902487_2903342_+	plasmid replication/partition related protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	39.8	6.4e-14
AXX67765.1|2903512_2904817_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67766.1|2904958_2909053_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	28.4	1.1e-55
AXX67767.1|2909086_2910073_+	two-component system response regulator	NA	W8CYM9	Bacillus_phage	26.8	2.8e-05
AXX67768.1|2910197_2911181_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	61.5	1.5e-99
>prophage 19
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	2923068	2993404	4920509	transposase	uncultured_Caudovirales_phage(30.0%)	48	NA	NA
AXX67774.1|2923068_2924067_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX67775.1|2924740_2925736_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AXX67776.1|2925896_2928413_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	28.5	6.3e-09
AXX67777.1|2928409_2929366_+	1-phosphofructokinase	NA	NA	NA	NA	NA
AXX67778.1|2929524_2931267_+	PTS fructose transporter subunit EIIBC	NA	NA	NA	NA	NA
AXX67779.1|2931444_2932722_+	carbohydrate porin	NA	NA	NA	NA	NA
AXX67780.1|2933388_2934357_+|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX67781.1|2934651_2936997_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69405.1|2937014_2937746_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67782.1|2937777_2940120_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67783.1|2940144_2940873_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67784.1|2940901_2943244_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67785.1|2943268_2944021_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67786.1|2944042_2946877_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67787.1|2946873_2947803_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67788.1|2947811_2950574_-	type IV secretion protein Rhs	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.2	1.5e-43
AXX67789.1|2955458_2955848_-	type VI secretion protein	NA	NA	NA	NA	NA
AXX67790.1|2959691_2960081_-	type VI secretion protein	NA	NA	NA	NA	NA
AXX67791.1|2960235_2961195_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX67792.1|2961127_2961442_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX67793.1|2961570_2962989_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67794.1|2962961_2963177_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67795.1|2964093_2964510_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67796.1|2964506_2964953_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67797.1|2965195_2965831_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67798.1|2966330_2967299_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX67799.1|2968795_2970010_+|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
AXX69406.1|2970124_2973226_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX67800.1|2973532_2973721_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67801.1|2974215_2974668_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67802.1|2974922_2976728_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXX67803.1|2976876_2977077_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67804.1|2977152_2977860_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	51.2	8.4e-52
AXX67805.1|2978011_2978404_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX67806.1|2978450_2978942_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX67807.1|2978938_2979292_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67808.1|2979380_2980121_+	flagellar motor protein	NA	NA	NA	NA	NA
AXX67809.1|2980127_2981102_+	flagellar motor protein MotD	NA	NA	NA	NA	NA
AXX67810.1|2981103_2981886_+	chromosome partitioning protein ParA	NA	Q8JL10	Natrialba_phage	37.7	1.0e-13
AXX67811.1|2981882_2982905_+	chemotaxis protein	NA	NA	NA	NA	NA
AXX67812.1|2983005_2983314_+	anti-anti-sigma factor	NA	NA	NA	NA	NA
AXX67813.1|2983310_2983676_+	response regulator	NA	W8CYM9	Bacillus_phage	39.3	2.7e-14
AXX67814.1|2983709_2985719_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AXX67815.1|2985858_2986071_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67816.1|2987819_2988509_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	36.2	2.2e-12
AXX67817.1|2988824_2989586_+	hypothetical protein	NA	NA	NA	NA	NA
AXX67818.1|2989599_2991942_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.2	4.5e-09
AXX67819.1|2992405_2993404_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	3089945	3101720	4920509	tRNA	Escherichia_phage(22.22%)	12	NA	NA
AXX67884.1|3089945_3090245_-	endolysin	NA	A0A1W6JT17	Escherichia_phage	66.7	1.5e-15
AXX67885.1|3090287_3090518_-	hypothetical protein	NA	D5LH07	Escherichia_phage	63.8	4.7e-20
AXX67886.1|3090761_3091511_-	isopentenyl transferase	NA	NA	NA	NA	NA
AXX67887.1|3091515_3092211_-	DNA helicase	NA	E5DV83	Deep-sea_thermophilic_phage	41.0	5.6e-16
AXX67888.1|3092396_3092696_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67889.1|3093083_3093503_-	helix-turn-helix domain-containing protein	NA	A0A1W6JTD5	Pseudomonas_phage	57.4	2.1e-34
AXX67890.1|3094213_3094426_-	carbon storage regulator	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
AXX67891.1|3094565_3097214_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.6	3.7e-84
AXX67892.1|3097315_3097804_-	regulatory protein RecX	NA	NA	NA	NA	NA
AXX67893.1|3098106_3099141_-	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	60.7	6.2e-112
AXX67894.1|3099313_3099955_-	LexA repressor 2	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
AXX69416.1|3100043_3101720_-	2-polyprenylphenol 6-hydroxylase	NA	E5EQ95	Micromonas_sp._RCC1109_virus	27.2	3.3e-38
>prophage 21
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	3162098	3297108	4920509	transposase,protease	Ralstonia_phage(33.33%)	99	NA	NA
AXX67944.1|3162098_3163424_+|protease	serine protease	protease	A0A217EQY2	Bacillus_phage	39.2	2.4e-23
AXX67945.1|3163434_3164193_+	heme ABC transporter permease	NA	NA	NA	NA	NA
AXX67946.1|3164189_3164396_+	heme exporter protein CcmD	NA	NA	NA	NA	NA
AXX67947.1|3164392_3164863_+	cytochrome c-type biogenesis protein CcmE 1	NA	NA	NA	NA	NA
AXX67948.1|3164926_3166915_+	c-type cytochrome biogenesis protein CcmF	NA	NA	NA	NA	NA
AXX67949.1|3166911_3167454_+	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
AXX69426.1|3167453_3167951_+	cytochrome C biogenesis protein	NA	NA	NA	NA	NA
AXX67950.1|3167950_3168655_+	C-type cytochrome biogenesis protein	NA	NA	NA	NA	NA
AXX67951.1|3168863_3172583_+	avirulence protein	NA	NA	NA	NA	NA
AXX67952.1|3172851_3173046_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	82.3	3.9e-20
AXX67953.1|3173049_3173349_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	92.4	6.4e-46
AXX67954.1|3173572_3178024_+	avirulence protein	NA	NA	NA	NA	NA
AXX67955.1|3178292_3178487_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	79.0	1.3e-18
AXX67956.1|3178490_3178790_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	92.4	6.4e-46
AXX67957.1|3179013_3183867_+	avirulence protein	NA	NA	NA	NA	NA
AXX67958.1|3184346_3184940_-	multidrug transporter	NA	NA	NA	NA	NA
AXX67959.1|3184929_3186405_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	66.8	1.2e-100
AXX67960.1|3186487_3189076_-	hydrophobe/amphiphile efflux-1 family RND transporter	NA	NA	NA	NA	NA
AXX67961.1|3189132_3190245_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXX67962.1|3190369_3190948_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AXX67963.1|3192434_3194522_+	type III effector	NA	NA	NA	NA	NA
AXX67964.1|3196420_3199501_+	histidine kinase	NA	NA	NA	NA	NA
AXX69427.1|3202536_3203244_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXX67965.1|3203240_3204233_+	cytochrome-c peroxidase	NA	NA	NA	NA	NA
AXX67966.1|3204229_3206689_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXX67967.1|3206802_3207783_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXX67968.1|3207791_3208820_+	type VI secretion system protein ImpA	NA	NA	NA	NA	NA
AXX67969.1|3210704_3211031_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67970.1|3211027_3213931_-	serine/threonine protein kinase	NA	A0A2R8FF19	Brazilian_cedratvirus	25.0	2.5e-09
AXX67971.1|3213927_3214650_-	phosphoprotein phosphatase	NA	NA	NA	NA	NA
AXX67972.1|3214646_3215294_-	type VI secretion-associated protein	NA	NA	NA	NA	NA
AXX67973.1|3215290_3218749_-	type VI secretion protein	NA	NA	NA	NA	NA
AXX67974.1|3218752_3220069_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67975.1|3220070_3221408_-	type VI secretion system-associated protein	NA	NA	NA	NA	NA
AXX67976.1|3221404_3222796_-	peptide-binding protein	NA	NA	NA	NA	NA
AXX67977.1|3222792_3223332_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67978.1|3223340_3225278_-	type IV secretion protein Rhs	NA	A0A077K8Q4	Ralstonia_phage	28.6	3.4e-39
AXX67979.1|3225542_3226001_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67980.1|3226075_3226327_-|transposase	transposase	transposase	A0A077SK28	Escherichia_phage	55.4	3.2e-14
AXX67981.1|3226948_3227446_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67982.1|3227634_3230340_-	ClpV1 family T6SS ATPase	NA	H6X3M6	Enterobacteria_phage	29.3	4.3e-80
AXX67983.1|3230372_3231383_-	type VI secretion protein	NA	NA	NA	NA	NA
AXX67984.1|3231346_3233224_-	type VI secretion system protein ImpG	NA	NA	NA	NA	NA
AXX67985.1|3233227_3233731_-	type VI secretion system lysozyme	NA	NA	NA	NA	NA
AXX67986.1|3233718_3234552_-	ImpE protein	NA	NA	NA	NA	NA
AXX67987.1|3234587_3235091_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67988.1|3235190_3236705_-	EvpB family type VI secretion protein	NA	NA	NA	NA	NA
AXX69428.1|3236697_3237204_-	type VI secretion system-associated protein	NA	NA	NA	NA	NA
AXX67989.1|3237725_3238367_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67990.1|3238562_3239531_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX67991.1|3241153_3242389_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX67992.1|3242574_3243543_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX67993.1|3243541_3244999_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX67994.1|3245065_3246988_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67995.1|3247012_3247750_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67996.1|3247780_3250123_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69429.1|3250140_3250887_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67997.1|3250915_3253750_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69430.1|3253746_3253950_-	hypothetical protein	NA	NA	NA	NA	NA
AXX67998.1|3253987_3254236_-|transposase	transposase	transposase	S5WIU1	Leptospira_phage	49.2	5.4e-14
AXX67999.1|3254407_3256237_-	transmembrane repetitive protein	NA	NA	NA	NA	NA
AXX68000.1|3256250_3256850_-	Fe-S biogenesis protein NfuA	NA	NA	NA	NA	NA
AXX68001.1|3256937_3257294_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
AXX68002.1|3257290_3257713_+	energy transducer TonB	NA	NA	NA	NA	NA
AXX68003.1|3257728_3257962_+	zinc transporter ZupT	NA	NA	NA	NA	NA
AXX68004.1|3257988_3258249_+	zinc transporter ZupT	NA	NA	NA	NA	NA
AXX68005.1|3258597_3260382_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68006.1|3260414_3261401_-	23S rRNA pseudouridine(955/2504/2580) synthase	NA	NA	NA	NA	NA
AXX68007.1|3261811_3265519_+	ribonuclease E/G	NA	NA	NA	NA	NA
AXX69431.1|3266044_3266470_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68008.1|3266388_3266808_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX68009.1|3266911_3267559_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXX68010.1|3267780_3268542_-	sulfurtransferase	NA	NA	NA	NA	NA
AXX68011.1|3268699_3269668_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX68012.1|3269801_3270167_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68013.1|3270225_3270657_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AXX68014.1|3270668_3271931_+	NAD(FAD)-utilizing dehydrogenase	NA	NA	NA	NA	NA
AXX68015.1|3271914_3273207_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
AXX68016.1|3273576_3274347_+	phosphopantetheinyl transferase	NA	NA	NA	NA	NA
AXX68017.1|3274431_3275100_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68018.1|3275103_3276339_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX69432.1|3277638_3277896_-	stress-induced protein	NA	NA	NA	NA	NA
AXX68019.1|3278335_3279319_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	7.5e-99
AXX68020.1|3279331_3280288_-|transposase	IS30 family transposase IS1112a	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
AXX68021.1|3280692_3281661_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX68022.1|3281663_3282752_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX68023.1|3283191_3283371_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68024.1|3283735_3284734_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX68025.1|3285908_3286886_+	siroheme synthase	NA	NA	NA	NA	NA
AXX68026.1|3287095_3287485_+	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
AXX68027.1|3287694_3287889_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AXX68028.1|3289282_3289645_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68029.1|3289628_3290198_-	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA	NA
AXX68030.1|3290235_3291489_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AXX68031.1|3291694_3292072_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69433.1|3293745_3293952_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX68032.1|3294000_3295236_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX68033.1|3295754_3296027_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69434.1|3296073_3297108_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
>prophage 22
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	3439277	3479526	4920509	tRNA,transposase,protease	Burkholderia_virus(14.29%)	38	NA	NA
AXX69442.1|3439277_3439703_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68136.1|3439621_3440041_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX68137.1|3441064_3443431_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AXX69443.1|3443427_3444102_-	methylamine utilization protein	NA	NA	NA	NA	NA
AXX68138.1|3444311_3445250_-	flavonol synthase	NA	NA	NA	NA	NA
AXX68139.1|3445372_3446722_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AXX68140.1|3446718_3447606_-	acetyl-CoA carboxylase carboxyl transferase subunit beta	NA	NA	NA	NA	NA
AXX68141.1|3447923_3448730_-	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
AXX68142.1|3449175_3450393_-	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
AXX68143.1|3450498_3451467_+	transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	24.1	3.2e-09
AXX68144.1|3451830_3452499_-	N-(5'-phosphoribosyl)anthranilate isomerase	NA	NA	NA	NA	NA
AXX68145.1|3452495_3453269_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AXX68146.1|3453842_3455795_-	ferrous iron transporter B	NA	NA	NA	NA	NA
AXX68147.1|3456475_3457501_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AXX68148.1|3457585_3458659_-	D-glycerate dehydrogenase	NA	M1HTA3	Paramecium_bursaria_Chlorella_virus	23.2	2.1e-14
AXX68149.1|3458651_3459755_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	40.4	1.6e-73
AXX68150.1|3459765_3460692_-	ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AXX68151.1|3460772_3461423_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68152.1|3461419_3462268_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
AXX68153.1|3462818_3464402_-	lytic transglycosylase	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	31.5	4.2e-11
AXX69444.1|3464321_3464507_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68154.1|3464696_3465044_+	hypothetical protein	NA	A0A248XCZ8	Klebsiella_phage	43.6	4.1e-12
AXX69446.1|3465824_3467000_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AXX69447.1|3467002_3467281_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69445.1|3467400_3467907_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
AXX68155.1|3468028_3469429_-	ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AXX68156.1|3469691_3470267_+	carboxymethylenebutenolidase	NA	NA	NA	NA	NA
AXX68157.1|3470263_3470698_+	HIT family protein	NA	NA	NA	NA	NA
AXX68158.1|3470856_3471327_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68159.1|3471572_3471758_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68160.1|3471792_3472362_-	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	70.1	2.6e-72
AXX68161.1|3472454_3473306_-	Fe-S-binding ATPase	NA	NA	NA	NA	NA
AXX69448.1|3473773_3474472_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.7	3.6e-31
AXX68162.1|3474693_3476709_+	peptidase M13	NA	NA	NA	NA	NA
AXX68163.1|3476979_3477678_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AXX68164.1|3477718_3478126_-	cysteine methyltransferase	NA	NA	NA	NA	NA
AXX68165.1|3478366_3478534_-	glutathione reductase	NA	NA	NA	NA	NA
AXX68166.1|3478563_3479526_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
>prophage 23
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	3490537	3546840	4920509	transposase,tRNA,protease,integrase	Ralstonia_phage(25.0%)	49	3541546:3541605	3558217:3558880
AXX68173.1|3490537_3491842_+|tRNA	tRNA(Ile)-lysidine synthetase	tRNA	NA	NA	NA	NA
AXX68174.1|3491873_3492134_+	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA	NA
AXX68175.1|3492135_3493011_+	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA	NA
AXX69450.1|3494857_3495322_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69451.1|3495851_3497219_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
AXX68176.1|3497364_3497946_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68177.1|3498202_3499648_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
AXX68178.1|3500494_3504415_-	DUF3971 domain-containing protein	NA	NA	NA	NA	NA
AXX68179.1|3504548_3506048_-	ribonuclease E/G	NA	NA	NA	NA	NA
AXX68180.1|3506047_3506620_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AXX68181.1|3506758_3507493_+	SIMPL domain-containing protein	NA	NA	NA	NA	NA
AXX68182.1|3507964_3511084_+	Oar protein	NA	NA	NA	NA	NA
AXX68183.1|3512502_3512973_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
AXX68184.1|3513527_3513737_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68185.1|3514062_3515178_-	molecular chaperone DnaJ	NA	NA	NA	NA	NA
AXX68186.1|3515189_3515606_-	ribosome silencing factor RsfS	NA	NA	NA	NA	NA
AXX68187.1|3515662_3516562_-	nicotinate-nicotinamide nucleotide adenylyltransferase	NA	NA	NA	NA	NA
AXX68188.1|3516558_3517587_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
AXX68189.1|3517609_3518245_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68190.1|3518758_3521401_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.7	2.7e-172
AXX68191.1|3521473_3522085_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68192.1|3522289_3523147_+	co-chaperone YbbN	NA	A0A1J0GW78	Streptomyces_phage	41.8	1.3e-11
AXX68193.1|3523402_3523852_+	DUF4442 domain-containing protein	NA	NA	NA	NA	NA
AXX68194.1|3524151_3525150_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX68195.1|3525241_3525661_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69452.1|3525579_3526005_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68196.1|3526061_3526250_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68197.1|3526614_3526908_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68198.1|3527381_3527615_+	DUF378 domain-containing protein	NA	NA	NA	NA	NA
AXX68199.1|3527648_3528662_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
AXX68200.1|3528629_3528821_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68201.1|3528911_3530309_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX68202.1|3530318_3531533_-|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.1e-54
AXX68203.1|3531678_3532206_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68204.1|3532202_3533201_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX68205.1|3533408_3533828_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69453.1|3533746_3534172_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68206.1|3534473_3536606_+	glycogen debranching enzyme	NA	NA	NA	NA	NA
AXX68207.1|3537156_3538125_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
AXX68208.1|3538285_3539254_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.5e-99
AXX68209.1|3540329_3540743_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69454.1|3540739_3541165_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68210.1|3541083_3541503_-|transposase	transposase	transposase	NA	NA	NA	NA
3541546:3541605	attL	CTAGCATCTACGCGCATCCGCGTGGGGGCTTGAAGAAGGAACTGGTCCAGGCCCTGCGTC	NA	NA	NA	NA
AXX68211.1|3543205_3543598_-	histone-like nucleoid-structuring protein	NA	NA	NA	NA	NA
AXX68212.1|3543688_3544081_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68213.1|3544449_3545175_+	hypothetical protein	NA	K4I1H9	Acidithiobacillus_phage	64.3	8.6e-36
AXX68214.1|3545188_3546034_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	4.2e-42
AXX69455.1|3546027_3546291_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AXX69456.1|3546420_3546840_+|integrase	integrase	integrase	C8CLF4	Xylella_phage	65.2	5.1e-41
3558217:3558880	attR	CTAGCATCTACGCGCATCCGCGTGGGGGCTTGAAGAAGGAACTGGTCCAGGCCCTGCGTCAGCACAAGCCCAAACGCGGATGACGGCGTACAACGGCGGCCACACGCAGCTGGGTGCCGGAGGAGTTGCGGATTGTGCATCGCCCCGAAGAAGTGCAGACGCGCTTGGTCCCAGGTCATTGGGAAGGCGACTTGATCAAGGGCGCATTCAATCGTTCTTGCGTGGGCACGTTGGTGGAACGCAAGACGCGCTTTGTCGTGCTGTGCCGCATGGATGGCTGCACGGCCGCAGATGCGCTGGAAGGGTTTACCCGGCAAATGAAGAAACTGCCGGCCTCAATGCGGACAAGTCTGACCTACGATCGCGGTACCGAGCTCACGTGCTACGCCGAGCTGATGCAAGGATTGAACATCGACGTGTGGTTCGCTGATCCACATGCGCCGTGGCAGCGGGGAAGTAACGAGAACACCAACGGCCTGCTGCGCCAATTCCTGCCCAAGGGCGCCGACCTGTCCACTGTCAGCCAAGAGTATCTCAATCACATCGCACTGCTGATGAATACCCGCCCTCGTCAGACGCTCGGATGGAAGACACCAAGCGAGGCAATGGAGGAAGAAATCGCAGCACTCAAATCACGTGTTGCACTTGAATCTTGAGACTGCCC	NA	NA	NA	NA
>prophage 24
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	3552363	3631652	4920509	tRNA,transposase,protease	Leptospira_phage(20.0%)	59	NA	NA
AXX68219.1|3552363_3553122_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AXX68220.1|3553197_3555060_+	SLC13 family permease	NA	NA	NA	NA	NA
AXX69457.1|3555117_3555459_-	ferredoxin	NA	NA	NA	NA	NA
AXX68221.1|3555718_3555994_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68222.1|3559040_3559754_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AXX68223.1|3559814_3560237_+	large-conductance mechanosensitive channel	NA	NA	NA	NA	NA
AXX69458.1|3560368_3560794_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68224.1|3560712_3561132_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX68225.1|3564205_3565117_-	RNA methyltransferase	NA	NA	NA	NA	NA
AXX68226.1|3565510_3565636_-	acetyltransferase	NA	NA	NA	NA	NA
AXX68227.1|3565632_3565809_-	acetyltransferase	NA	NA	NA	NA	NA
AXX68228.1|3566464_3567463_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX68229.1|3568309_3570979_-	aminopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	48.5	9.6e-242
AXX68230.1|3571330_3574456_-	multidrug transporter AcrB	NA	S5VTK5	Leptospira_phage	22.8	7.0e-74
AXX68231.1|3574452_3575523_-	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXX68232.1|3575957_3577934_-	adenylyl-sulfate kinase	NA	A0A1V0SGC3	Hokovirus	30.6	5.6e-29
AXX68233.1|3577933_3578842_-	sulfate adenylyltransferase subunit 2	NA	NA	NA	NA	NA
AXX68234.1|3579022_3580870_+	sulfite reductase [NADPH] flavoprotein, alpha-component	NA	NA	NA	NA	NA
AXX68235.1|3580978_3582700_+	sulfite reductase subunit beta	NA	NA	NA	NA	NA
AXX68236.1|3582696_3583422_+	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA	NA
AXX68237.1|3583557_3585150_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68238.1|3585149_3587153_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX68239.1|3587347_3587785_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68240.1|3588107_3589304_+	histidine kinase	NA	NA	NA	NA	NA
AXX68241.1|3590374_3590656_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68242.1|3590666_3591650_-	CysB family transcriptional regulator	NA	NA	NA	NA	NA
AXX68243.1|3591818_3593024_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AXX68244.1|3593040_3594000_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	49.0	3.8e-79
AXX68245.1|3594023_3594275_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68246.1|3594299_3594806_+	protein-S-isoprenylcysteine methyltransferase	NA	NA	NA	NA	NA
AXX68247.1|3595001_3595541_+	RNase III inhibitor	NA	A0A0K1L687	Scale_drop_disease_virus	42.6	9.9e-29
AXX68248.1|3595742_3596747_-	fructose-bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	48.2	3.9e-79
AXX68249.1|3597336_3598803_-	pyruvate kinase	NA	NA	NA	NA	NA
AXX68250.1|3599059_3599704_-	HAD family hydrolase	NA	NA	NA	NA	NA
AXX68251.1|3599700_3600876_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
AXX68252.1|3600918_3601146_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68253.1|3601209_3602568_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68254.1|3602564_3604889_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68255.1|3605240_3605660_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69459.1|3605578_3606004_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68256.1|3605963_3606236_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69460.1|3608011_3608185_+	oxidoreductase	NA	NA	NA	NA	NA
AXX68257.1|3608402_3610508_+	catalase HPII	NA	A0A2K9L572	Tupanvirus	47.7	4.3e-136
AXX68258.1|3610869_3611058_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69461.1|3611333_3612572_+	type III secretion system effector protein	NA	NA	NA	NA	NA
AXX68259.1|3612799_3614941_-	outer protein P	NA	NA	NA	NA	NA
AXX68260.1|3615703_3616672_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	5.6e-99
AXX68261.1|3616846_3617371_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68262.1|3617180_3617441_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69462.1|3617487_3618522_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
AXX68263.1|3618528_3618756_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68264.1|3618905_3619631_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXX68265.1|3619762_3620224_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68266.1|3622338_3624459_-	peptidase S9	NA	NA	NA	NA	NA
AXX68267.1|3624725_3625571_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68268.1|3625827_3626190_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68269.1|3626562_3627531_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	5.6e-99
AXX68270.1|3627855_3629826_-	oligopeptide transporter, OPT family	NA	NA	NA	NA	NA
AXX68271.1|3630254_3631652_+|protease	serine protease	protease	NA	NA	NA	NA
>prophage 25
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	3746465	3813466	4920509	transposase	Bacillus_phage(18.18%)	57	NA	NA
AXX68344.1|3746465_3747701_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX68345.1|3748236_3748716_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68346.1|3748739_3749204_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68347.1|3749200_3749494_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68348.1|3749520_3750000_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68349.1|3750023_3750488_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68350.1|3750484_3751381_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68351.1|3754229_3755186_+	sulfatase modifying factor 1	NA	A0A075BSL8	Microcystis_phage	33.7	8.2e-18
AXX69472.1|3755242_3755809_-	DNA repair protein	NA	NA	NA	NA	NA
AXX68352.1|3755876_3756836_+	sulfatase modifying factor 1	NA	NA	NA	NA	NA
AXX68353.1|3756983_3760049_-	DNA repair protein	NA	NA	NA	NA	NA
AXX69473.1|3760035_3762975_-	type IV secretion protein Rhs	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.7	7.5e-54
AXX68354.1|3763960_3765034_+	type VI secretion protein	NA	NA	NA	NA	NA
AXX68355.1|3765086_3765917_-	cell envelope biogenesis protein OmpA	NA	NA	NA	NA	NA
AXX68356.1|3765913_3766897_-	type VI secretion-associated protein	NA	NA	NA	NA	NA
AXX68357.1|3766893_3770631_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
AXX68358.1|3770646_3772128_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69474.1|3772187_3772448_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68359.1|3772557_3773436_-	hypothetical protein	NA	A8ATW4	Listeria_phage	35.5	1.3e-06
AXX68360.1|3773635_3774376_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69475.1|3774656_3775193_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX68361.1|3775392_3776595_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AXX68362.1|3776785_3777202_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68363.1|3777211_3777496_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68364.1|3777492_3777672_+	Arc family DNA binding domain-containing protein	NA	NA	NA	NA	NA
AXX68365.1|3777802_3778600_+	peptidase	NA	NA	NA	NA	NA
AXX68366.1|3778663_3779338_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
AXX68367.1|3779340_3779727_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68368.1|3779809_3780991_-	polyketide cyclase	NA	NA	NA	NA	NA
AXX68369.1|3781341_3781983_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXX68370.1|3781982_3783179_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXX68371.1|3783423_3784020_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXX68372.1|3784024_3784765_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AXX68373.1|3784800_3785610_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AXX68374.1|3785612_3785870_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
AXX68375.1|3785938_3786430_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68376.1|3786581_3787874_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXX68377.1|3787866_3788583_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	33.9	1.4e-22
AXX68378.1|3788801_3790535_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69476.1|3790634_3791399_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68379.1|3791395_3793066_+	phosphoethanolamine transferase	NA	NA	NA	NA	NA
AXX68380.1|3793177_3795196_+	peptidase M20	NA	NA	NA	NA	NA
AXX68381.1|3795277_3795682_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68382.1|3797023_3799183_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.0	5.7e-35
AXX69478.1|3799179_3800391_-	hemolysin D	NA	NA	NA	NA	NA
AXX69477.1|3800479_3801283_-	sulfotransferase	NA	M4QPS9	Synechococcus_phage	27.3	4.5e-25
AXX68383.1|3801713_3801896_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68384.1|3802363_3805318_+	glycine dehydrogenase	NA	M4QFZ1	Prochlorococcus_phage	49.9	9.0e-257
AXX68385.1|3805377_3805560_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68386.1|3805647_3806097_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68387.1|3806093_3806789_+	VRR-NUC domain-containing protein	NA	Q8W6S1	Burkholderia_virus	46.1	2.2e-36
AXX68388.1|3806796_3807867_+	hypothetical protein	NA	E5E3X8	Burkholderia_phage	36.6	5.7e-60
AXX68389.1|3807863_3808949_+	hypothetical protein	NA	E5E3X8	Burkholderia_phage	37.9	4.0e-61
AXX68390.1|3810349_3811306_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.3	1.8e-41
AXX68391.1|3811462_3811882_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69479.1|3811800_3812226_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68392.1|3812407_3813466_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	4118624	4137344	4920509	transposase	Ralstonia_phage(66.67%)	16	NA	NA
AXX69507.1|4118624_4120007_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX68647.1|4120429_4120657_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68648.1|4120661_4121321_+	histidine kinase	NA	W8CYF6	Bacillus_phage	23.4	7.1e-13
AXX69508.1|4121507_4122878_-	glutamate--cysteine ligase	NA	NA	NA	NA	NA
AXX68649.1|4123087_4123783_+	nodulin 21	NA	NA	NA	NA	NA
AXX68650.1|4124729_4125353_-	GTP-binding protein	NA	NA	NA	NA	NA
AXX68651.1|4125497_4126295_+	cytochrome C	NA	NA	NA	NA	NA
AXX68652.1|4126388_4127039_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AXX68653.1|4127130_4127946_+	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
AXX69509.1|4127995_4128733_+	endonuclease	NA	NA	NA	NA	NA
AXX68654.1|4130661_4131651_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	7.5e-99
AXX68655.1|4131773_4134347_+	cystathionine gamma-synthase	NA	NA	NA	NA	NA
AXX68656.1|4134539_4134959_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69510.1|4134877_4135303_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68657.1|4135375_4136344_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX68658.1|4137077_4137344_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	4140720	4225452	4920509	tRNA,transposase,tail,protease	Ralstonia_phage(12.5%)	60	NA	NA
AXX69511.1|4140720_4141953_+|tRNA	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	tRNA	K4IEX3	Salmonella_phage	41.7	2.0e-72
AXX68659.1|4141992_4142955_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX68660.1|4143130_4144087_-|transposase	IS30 family transposase IS1112a	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
AXX68661.1|4144298_4145267_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX68662.1|4145602_4146022_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69512.1|4145940_4146366_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68663.1|4149742_4150741_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX68664.1|4151202_4151433_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68665.1|4152057_4154100_+	poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA	NA	NA	NA	NA	NA
AXX68666.1|4154101_4156000_+	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA	NA	NA	NA	NA
AXX68667.1|4156001_4157255_+	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA	NA
AXX68668.1|4157251_4157857_+	poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA	NA	NA	NA	NA
AXX68669.1|4158276_4159431_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
AXX68670.1|4159433_4160462_-	iron dicitrate transport regulator FecR	NA	NA	NA	NA	NA
AXX68671.1|4160458_4161535_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AXX68672.1|4161575_4162853_-	glucose/galactose MFS transporter	NA	NA	NA	NA	NA
AXX68673.1|4162897_4163665_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXX68674.1|4163879_4165046_-	DUF5009 domain-containing protein	NA	NA	NA	NA	NA
AXX68675.1|4167601_4170499_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	25.2	8.8e-23
AXX68676.1|4170649_4173340_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX68677.1|4174913_4175330_+	hypothetical protein	NA	U5P429	Shigella_phage	54.0	7.7e-13
AXX68678.1|4175419_4176604_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXX68679.1|4176671_4177409_+	pteridine reductase	NA	NA	NA	NA	NA
AXX68680.1|4177577_4178093_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AXX68681.1|4178184_4179687_-	hybrid sensor histidine kinase/response regulator	NA	A0A2K9L5I4	Tupanvirus	26.2	1.1e-08
AXX68682.1|4179690_4180131_-	response regulator	NA	NA	NA	NA	NA
AXX68683.1|4180127_4181939_-	histidine kinase	NA	A0A2K9L0Z8	Tupanvirus	28.3	3.5e-09
AXX68684.1|4182224_4182596_-	BON domain-containing protein	NA	NA	NA	NA	NA
AXX68685.1|4182746_4183799_+	oxidoreductase	NA	NA	NA	NA	NA
AXX68686.1|4184138_4185080_-	6-phosphogluconate dehydrogenase (decarboxylating)	NA	M4SJX8	Cyanophage	44.9	5.9e-69
AXX68687.1|4185100_4186438_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68688.1|4186609_4186990_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68689.1|4187114_4187876_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68690.1|4190133_4191537_-	nicotinate phosphoribosyltransferase	NA	A0A218M332	Acidovorax_phage	51.5	8.1e-131
AXX68691.1|4191659_4192715_-	ADP-ribose pyrophosphatase	NA	A0A1B0V161	Roseobacter_phage	47.1	1.3e-80
AXX69513.1|4192986_4193742_+	endonuclease	NA	NA	NA	NA	NA
AXX68692.1|4194033_4196217_-|tail,protease	tail-specific protease	tail,protease	A0A0R6PIZ1	Moraxella_phage	31.6	2.8e-82
AXX69514.1|4196715_4197711_-	restriction endonuclease	NA	NA	NA	NA	NA
AXX68693.1|4197806_4199618_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXX68694.1|4199862_4200876_-	lipoyl synthase	NA	NA	NA	NA	NA
AXX68695.1|4200890_4201589_-	octanoyltransferase	NA	NA	NA	NA	NA
AXX68696.1|4201576_4201855_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68697.1|4201981_4202635_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68698.1|4202920_4204126_-	serine-type D-Ala-D-Ala carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	41.2	2.7e-66
AXX68699.1|4204234_4204516_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68700.1|4204626_4206042_-	hypothetical protein	NA	F5B3X9	Synechococcus_phage	50.6	4.3e-15
AXX68701.1|4206038_4207178_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AXX68702.1|4207446_4207899_-	polygalacturonase	NA	NA	NA	NA	NA
AXX68703.1|4207808_4208156_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68704.1|4208828_4211087_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68705.1|4211055_4213566_-	type IV secretion protein Rhs	NA	NA	NA	NA	NA
AXX68706.1|4214327_4215446_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
AXX68707.1|4215442_4217503_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
AXX68708.1|4217506_4217992_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AXX68709.1|4217988_4219365_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AXX68710.1|4219537_4220584_-	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	21.2	4.6e-06
AXX68711.1|4220860_4221793_+	carbohydrate kinase family protein	NA	NA	NA	NA	NA
AXX68712.1|4222033_4223002_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AXX68713.1|4224613_4224985_-	hypothetical protein	NA	K4I1H9	Acidithiobacillus_phage	64.0	2.3e-24
AXX68714.1|4224996_4225452_-|tRNA	tRNA-specific adenosine deaminase	tRNA	NA	NA	NA	NA
>prophage 29
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	4259110	4337920	4920509	protease,transposase	uncultured_Caudovirales_phage(12.5%)	59	NA	NA
AXX68740.1|4259110_4259557_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69517.1|4259322_4259901_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68741.1|4260026_4260287_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68742.1|4260214_4261864_-	peptidase M20	NA	NA	NA	NA	NA
AXX68743.1|4263254_4264742_-	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	56.7	1.0e-123
AXX69518.1|4264949_4266392_+	endoglucanase	NA	H2DE45	Erwinia_phage	32.3	7.4e-47
AXX69519.1|4267626_4270365_-	sensor domain-containing diguanylate cyclase	NA	G3MA91	Bacillus_virus	28.6	2.0e-08
AXX68744.1|4270506_4273386_+	peptidase M16	NA	NA	NA	NA	NA
AXX68745.1|4273933_4274863_+	histidine kinase	NA	NA	NA	NA	NA
AXX68746.1|4274901_4275906_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69520.1|4276148_4276574_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68747.1|4276492_4276912_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX69521.1|4277959_4278745_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68748.1|4278767_4278974_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68749.1|4278998_4280690_+	alpha,alpha-trehalase	NA	NA	NA	NA	NA
AXX68750.1|4281233_4281680_-	autotransporter	NA	NA	NA	NA	NA
AXX68751.1|4282010_4282295_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69522.1|4282419_4282686_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68752.1|4282889_4283801_-	magnesium transporter	NA	NA	NA	NA	NA
AXX69523.1|4284046_4285042_+	type III secretion system effector protein	NA	NA	NA	NA	NA
AXX69524.1|4285135_4286512_-	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA	NA
AXX68753.1|4287678_4289379_+	1,4-beta-cellobiosidase	NA	NA	NA	NA	NA
AXX68754.1|4289787_4291560_+	cellulase	NA	NA	NA	NA	NA
AXX68755.1|4291835_4292711_-	EamA family transporter	NA	NA	NA	NA	NA
AXX69525.1|4292908_4293787_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXX68756.1|4293878_4294481_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68757.1|4295826_4296918_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68758.1|4298820_4301145_+	S9 family peptidase	NA	NA	NA	NA	NA
AXX68759.1|4301340_4303287_-	peptidase S9	NA	NA	NA	NA	NA
AXX68760.1|4303661_4303853_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68761.1|4304242_4305826_+	oxidoreductase	NA	M1NLX1	Moumouvirus	27.5	6.5e-36
AXX69526.1|4306173_4306770_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68762.1|4308118_4309027_-	threonine aldolase	NA	NA	NA	NA	NA
AXX68763.1|4309001_4310477_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.5	3.1e-40
AXX68764.1|4311088_4312018_-	lipid kinase YegS	NA	NA	NA	NA	NA
AXX68765.1|4312252_4312744_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXX69527.1|4312740_4313412_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AXX68766.1|4313806_4314136_-	J domain-containing protein	NA	NA	NA	NA	NA
AXX68767.1|4314344_4315271_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	34.7	3.9e-49
AXX69528.1|4315744_4316422_+	NYN domain-containing protein	NA	A4JWQ6	Burkholderia_virus	60.3	8.8e-75
AXX68768.1|4316382_4316817_+	lytic enzyme	NA	NA	NA	NA	NA
AXX68769.1|4317245_4317905_+|protease	zinc metalloprotease	protease	NA	NA	NA	NA
AXX68770.1|4318572_4318797_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68771.1|4318938_4319424_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68772.1|4319962_4322791_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AXX68773.1|4322790_4323165_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AXX68774.1|4323161_4324706_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AXX68775.1|4324702_4325209_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AXX68776.1|4325205_4325490_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AXX68777.1|4325486_4325840_+	Na+/H+ antiporter subunit G	NA	NA	NA	NA	NA
AXX68778.1|4326236_4326626_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68779.1|4327049_4328375_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
AXX68780.1|4328739_4329855_-	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
AXX68781.1|4329980_4330469_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXX68782.1|4330825_4331416_-	thioredoxin family protein	NA	NA	NA	NA	NA
AXX68783.1|4331427_4332936_-	MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	33.6	2.9e-62
AXX68784.1|4333378_4334272_-	tryptophan 2,3-dioxygenase	NA	NA	NA	NA	NA
AXX68785.1|4335656_4336322_+	pyruvate dehydrogenase E1 subunit alpha	NA	NA	NA	NA	NA
AXX68786.1|4336921_4337920_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 30
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	4348830	4403636	4920509	tRNA,transposase	Ralstonia_phage(25.0%)	45	NA	NA
AXX68795.1|4348830_4350213_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX68796.1|4350362_4351331_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX68797.1|4351456_4352209_-	haloacid dehalogenase	NA	NA	NA	NA	NA
AXX68798.1|4352246_4352687_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69531.1|4352893_4353235_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68799.1|4353460_4353838_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69532.1|4354048_4354246_-	CPXCG motif-containing cysteine-rich protein	NA	NA	NA	NA	NA
AXX68800.1|4354552_4355299_-	D-alanyl-D-alanine dipeptidase	NA	NA	NA	NA	NA
AXX68801.1|4355391_4356198_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
AXX69533.1|4356421_4357834_+	NlpC-P60 family protein	NA	NA	NA	NA	NA
AXX68802.1|4357830_4358928_+	dipeptide epimerase	NA	NA	NA	NA	NA
AXX68803.1|4360811_4361915_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX68804.1|4362362_4362788_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68805.1|4362706_4363126_-|transposase	transposase	transposase	NA	NA	NA	NA
AXX68806.1|4363407_4364184_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68807.1|4364180_4365497_+	amino acid transporter	NA	NA	NA	NA	NA
AXX68808.1|4365555_4365942_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68809.1|4366013_4367249_+|transposase	ISL3 family transposase ISXoo13	transposase	NA	NA	NA	NA
AXX68810.1|4367252_4367666_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX68811.1|4367842_4368124_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68812.1|4368684_4369119_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68813.1|4369293_4370472_+	glucose dehydrogenase	NA	NA	NA	NA	NA
AXX68814.1|4371377_4372430_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX68815.1|4374763_4376935_-	beta-glucosidase	NA	NA	NA	NA	NA
AXX68816.1|4377162_4377519_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AXX68817.1|4377597_4378662_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	56.6	4.3e-100
AXX68818.1|4378941_4379157_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
AXX68819.1|4379473_4379920_+|tRNA	glutamyl-tRNA amidotransferase	tRNA	A0A292GL36	Xanthomonas_phage	45.2	1.0e-23
AXX68820.1|4381397_4382360_+	BrkB protein	NA	NA	NA	NA	NA
AXX68821.1|4382449_4384198_+	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	34.5	4.2e-44
AXX68822.1|4385770_4386037_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68823.1|4386261_4387308_+	bile acid:sodium symporter	NA	NA	NA	NA	NA
AXX68824.1|4387491_4389072_+	thiol reductase thioredoxin	NA	NA	NA	NA	NA
AXX68825.1|4389460_4390357_-	protoheme IX farnesyltransferase	NA	NA	NA	NA	NA
AXX68826.1|4390359_4391523_-	heme A synthase	NA	NA	NA	NA	NA
AXX68827.1|4391533_4392109_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68828.1|4392136_4392856_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68829.1|4392916_4393135_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68830.1|4393227_4394103_-	cytochrome c oxidase subunit 3	NA	NA	NA	NA	NA
AXX68831.1|4394141_4394738_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AXX68832.1|4394888_4396493_-	cytochrome c oxidase subunit I	NA	NA	NA	NA	NA
AXX68833.1|4396531_4397485_-	cytochrome c oxidase subunit II	NA	NA	NA	NA	NA
AXX68834.1|4397501_4397978_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68835.1|4398254_4401455_+	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AXX68836.1|4402637_4403636_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 31
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	4421839	4533838	4920509	integrase,tRNA,transposase	Acidithiobacillus_phage(14.29%)	80	4421721:4421741	4489839:4489859
4421721:4421741	attL	ATAGTCGCCCCTGAAAAACCG	NA	NA	NA	NA
AXX68853.1|4421839_4423216_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	56.5	3.7e-80
AXX68854.1|4427049_4427310_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69537.1|4428322_4428553_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68855.1|4428810_4429779_-|transposase	IS5 family transposase ISXo1	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
AXX68856.1|4429945_4430917_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.9	7.2e-38
AXX68857.1|4431109_4432294_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
AXX68858.1|4432761_4433577_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	35.8	7.4e-36
AXX68859.1|4434335_4435652_-	N-acyl-L-amino acid amidohydrolase	NA	NA	NA	NA	NA
AXX68860.1|4435911_4437156_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXX68861.1|4437248_4440497_+	acriflavine resistance protein B	NA	NA	NA	NA	NA
AXX68862.1|4440630_4443771_+	acriflavin resistance protein	NA	NA	NA	NA	NA
AXX68863.1|4444060_4445428_-	DUF1338 domain-containing protein	NA	NA	NA	NA	NA
AXX68864.1|4445437_4445647_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68865.1|4446172_4447171_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXX68866.1|4447556_4448555_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX69538.1|4448984_4449455_+	thioesterase	NA	NA	NA	NA	NA
AXX68867.1|4449483_4449906_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68868.1|4449981_4450416_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68869.1|4450525_4451041_+	protein-export protein SecB	NA	NA	NA	NA	NA
AXX68870.1|4451056_4452082_+	glycerol-3-phosphate dehydrogenase (NAD(P)(+))	NA	NA	NA	NA	NA
AXX68871.1|4452404_4453001_-	Ax21 family protein	NA	NA	NA	NA	NA
AXX68872.1|4453358_4455086_+	pyruvate oxidase	NA	NA	NA	NA	NA
AXX68873.1|4455135_4456578_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXX68874.1|4456562_4457909_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXX68875.1|4458099_4458849_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68876.1|4458950_4459562_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68877.1|4459666_4460890_+	MFS transporter	NA	NA	NA	NA	NA
AXX68878.1|4461231_4461708_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
AXX68879.1|4461734_4462196_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68880.1|4462581_4462902_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68881.1|4463003_4464020_+	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
AXX68882.1|4464091_4465255_+	addiction module protein	NA	NA	NA	NA	NA
AXX68883.1|4465251_4466883_+	site-specific DNA-methyltransferase	NA	A0A2K5B2C1	Erysipelothrix_phage	37.5	1.7e-63
AXX69539.1|4466890_4469386_+	helicase SNF2	NA	NA	NA	NA	NA
AXX68884.1|4469382_4470285_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXX68885.1|4470506_4470890_-	zinc/iron-chelating domain-containing protein	NA	NA	NA	NA	NA
AXX68886.1|4471208_4472879_+	peptide synthase	NA	NA	NA	NA	NA
AXX68887.1|4473107_4474118_+	3-beta hydroxysteroid dehydrogenase	NA	A0A0E3FNQ3	Synechococcus_phage	32.6	1.5e-14
AXX68888.1|4474182_4474341_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AXX68889.1|4474358_4474577_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68890.1|4474575_4475952_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	5.0e-77
AXX68891.1|4475962_4476496_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXX68892.1|4476924_4478184_-	phosphodiesterase	NA	NA	NA	NA	NA
AXX68893.1|4478322_4479630_-	MFS transporter	NA	NA	NA	NA	NA
AXX68894.1|4479801_4480023_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69541.1|4481107_4481314_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69540.1|4481232_4481658_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX69542.1|4481714_4482749_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
AXX68895.1|4483099_4483645_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
AXX69543.1|4483670_4483937_-	zinc/iron-chelating domain-containing protein	NA	NA	NA	NA	NA
AXX68896.1|4484111_4485950_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AXX68897.1|4486180_4487056_-|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	48.5	5.3e-56
AXX68898.1|4488541_4489777_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXX68899.1|4490655_4491636_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	2.4e-97
4489839:4489859	attR	CGGTTTTTCAGGGGCGACTAT	NA	NA	NA	NA
AXX68900.1|4492750_4493650_+	coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AXX68901.1|4494597_4497399_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	30.4	2.4e-65
AXX68902.1|4497475_4497766_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68903.1|4500403_4500658_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68904.1|4501156_4503844_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AXX68905.1|4507165_4511107_+	avirulence protein	NA	NA	NA	NA	NA
AXX68906.1|4511172_4511373_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68907.1|4512795_4513308_-|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	68.8	1.6e-44
AXX68908.1|4513304_4513532_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68909.1|4513816_4514263_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68910.1|4514381_4516388_+	IcfG protein	NA	NA	NA	NA	NA
AXX68911.1|4516384_4516816_+	ATP-binding protein	NA	NA	NA	NA	NA
AXX68912.1|4516812_4517232_+	anti-sigma F factor antagonist	NA	NA	NA	NA	NA
AXX68913.1|4517717_4518482_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AXX68914.1|4518692_4519283_-	nitroreductase family protein	NA	NA	NA	NA	NA
AXX69544.1|4519416_4520364_+	nucleoside-diphosphate sugar epimerase	NA	NA	NA	NA	NA
AXX68915.1|4520406_4521276_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68916.1|4521272_4521773_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68917.1|4524871_4525432_+	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	29.6	2.1e-13
AXX68918.1|4525527_4528353_-	bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase	NA	NA	NA	NA	NA
AXX68919.1|4528514_4529033_+	hypothetical protein	NA	NA	NA	NA	NA
AXX68920.1|4529032_4529953_+	gluconolactonase	NA	NA	NA	NA	NA
AXX68921.1|4530381_4531005_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68922.1|4531014_4531200_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69545.1|4531302_4531884_-	hypothetical protein	NA	NA	NA	NA	NA
AXX68923.1|4532839_4533838_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
>prophage 32
CP020334	Xanthomonas oryzae pv. oryzae strain XM9 chromosome, complete genome	4920509	4678448	4753124	4920509	tRNA,transposase,tail	Escherichia_phage(20.0%)	48	NA	NA
AXX69022.1|4678448_4679366_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	62.5	3.1e-83
AXX69023.1|4679456_4679966_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69024.1|4679969_4681307_+	xylose isomerase	NA	NA	NA	NA	NA
AXX69025.1|4681532_4682600_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AXX69026.1|4682775_4684971_+	alpha-glucuronidase	NA	NA	NA	NA	NA
AXX69027.1|4684967_4686932_+	9-O-acetylesterase	NA	NA	NA	NA	NA
AXX69028.1|4686943_4688203_+	bifunctional D-altronate/D-mannonate dehydratase	NA	Q6A202	Oenococcus_phage	26.0	3.5e-40
AXX69560.1|4688202_4689903_+	glycoside hydrolase 43 family protein	NA	NA	NA	NA	NA
AXX69029.1|4689905_4692620_+	glucan 1,4-alpha-glucosidase	NA	NA	NA	NA	NA
AXX69030.1|4692842_4694315_+	mannitol dehydrogenase	NA	G8DCZ3	Micromonas_pusilla_virus	32.1	4.5e-47
AXX69031.1|4695292_4696348_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69032.1|4696575_4697994_-	uronate isomerase	NA	NA	NA	NA	NA
AXX69033.1|4698034_4699012_-	1,4-beta-xylanase	NA	NA	NA	NA	NA
AXX69034.1|4700428_4701730_-	MFS transporter	NA	NA	NA	NA	NA
AXX69035.1|4702191_4705125_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXX69036.1|4705223_4706711_+	MFS transporter	NA	NA	NA	NA	NA
AXX69037.1|4706742_4707777_+	alpha-N-arabinofuranosidase	NA	NA	NA	NA	NA
AXX69038.1|4710264_4711254_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXX69039.1|4711483_4711939_+	histidine kinase	NA	NA	NA	NA	NA
AXX69040.1|4711981_4712401_+|transposase	transposase	transposase	NA	NA	NA	NA
AXX69561.1|4712319_4712745_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AXX69041.1|4712761_4713862_+	signal EAL domain protein	NA	NA	NA	NA	NA
AXX69042.1|4713927_4715049_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
AXX69043.1|4715058_4716135_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69044.1|4716227_4716908_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AXX69045.1|4717780_4719187_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
AXX69562.1|4719289_4720246_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.6	3.1e-41
AXX69046.1|4721712_4722171_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXX69047.1|4722272_4722701_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
AXX69048.1|4722947_4723811_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69563.1|4726987_4727308_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69049.1|4727415_4727664_+	transcriptional regulator	NA	NA	NA	NA	NA
AXX69050.1|4727872_4728631_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69051.1|4728627_4729413_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69052.1|4729421_4729697_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69053.1|4729614_4730223_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69054.1|4730225_4730660_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69055.1|4730775_4731021_-	hypothetical protein	NA	NA	NA	NA	NA
AXX69056.1|4731021_4731216_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69057.1|4731356_4731689_+	hypothetical protein	NA	NA	NA	NA	NA
AXX69058.1|4732138_4733533_-	nucleoside hydrolase	NA	NA	NA	NA	NA
AXX69059.1|4734461_4734752_-	transcriptional regulator	NA	M9MUN2	Rhodococcus_phage	53.8	1.5e-15
AXX69060.1|4734769_4735051_-	plasmid maintenance system killer protein	NA	A0A222YWE2	Escherichia_phage	40.7	3.1e-10
AXX69061.1|4735145_4737398_-	exodeoxyribonuclease V subunit alpha	NA	A0A0K2FLP8	Brevibacillus_phage	21.9	1.8e-10
AXX69062.1|4737585_4741659_-	exodeoxyribonuclease V subunit beta	NA	S5MMD7	Bacillus_phage	22.5	4.1e-10
AXX69063.1|4741655_4745069_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA	NA
AXX69064.1|4751982_4752528_+	microcystin-dependent protein	NA	A0A0U4JXW2	Arthrobacter_phage	32.9	1.9e-11
AXX69065.1|4752596_4753124_+|tail	phage tail protein	tail	A0A218M5J0	Arthrobacter_phage	33.1	1.2e-15
