The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
AP018677	Vibrio cholerae V060002 DNA, complete genome	4057041	705377	711994	4057041		Staphylococcus_phage(66.67%)	7	NA	NA
BBE11807.1|705377_706511_+	gamma-glutamate kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
BBE11808.1|706522_707773_+	gamma-glutamyl-phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	49.5	5.0e-100
BBE11809.1|707872_708322_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
BBE11810.1|708347_709451_+	riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.1	1.3e-43
BBE11811.1|709455_710109_+	riboflavin synthase alpha subunit	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
BBE11812.1|710149_711259_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
BBE11813.1|711523_711994_+	riboflavin synthase beta chain	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
>prophage 2
AP018677	Vibrio cholerae V060002 DNA, complete genome	4057041	1425156	1438522	4057041		Vibrio_phage(88.89%)	20	NA	NA
BBE12462.1|1425156_1425531_-	cholera enterotoxin subunit B	NA	A0A142I6Y1	Vibrio_phage	100.0	5.9e-65
BBE12463.1|1425527_1426304_-	heat-labile enterotoxin A	NA	A0A142I6Y0	Vibrio_phage	100.0	1.3e-151
BBE12464.1|1426402_1427602_-	Zona occludens toxin	NA	A0A142I6Z1	Vibrio_phage	100.0	5.3e-240
BBE12465.1|1427598_1427883_-	hypothetical protein	NA	A0A0F6YNQ7	Vibrio_phage	100.0	4.0e-45
BBE12466.1|1427888_1429076_-	hypothetical protein	NA	A0A142I701	Vibrio_phage	100.0	1.4e-200
BBE12467.1|1429182_1429431_-	hypothetical protein	NA	A0A0N7F140	Vibrio_phage	100.0	8.8e-33
BBE12468.1|1429423_1429567_-	hypothetical protein	NA	NA	NA	NA	NA
BBE12469.1|1429566_1429947_-	hypothetical protein	NA	A0A0N9HE73	Vibrio_phage	100.0	1.4e-69
BBE12470.1|1429927_1431007_-	hypothetical protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
BBE12471.1|1431138_1431474_+	HTH-type transcriptional regulator Xre	NA	A0A0N9HJE7	Vibrio_phage	100.0	4.7e-53
BBE12472.1|1432204_1432579_-	Cholera enterotoxin subunit B	NA	A0A142I6Y1	Vibrio_phage	100.0	5.9e-65
BBE12473.1|1432575_1433352_-	heat-labile enterotoxin A	NA	A0A142I6Y0	Vibrio_phage	100.0	1.3e-151
BBE12474.1|1433450_1434650_-	Zona occludens toxin	NA	A0A142I6Z1	Vibrio_phage	100.0	5.3e-240
BBE12475.1|1434646_1434931_-	hypothetical protein	NA	A0A0F6YNQ7	Vibrio_phage	100.0	4.0e-45
BBE12476.1|1434936_1436124_-	hypothetical protein	NA	A0A142I701	Vibrio_phage	100.0	1.4e-200
BBE12477.1|1436230_1436479_-	hypothetical protein	NA	A0A0N7F140	Vibrio_phage	100.0	8.8e-33
BBE12478.1|1436471_1436615_-	hypothetical protein	NA	NA	NA	NA	NA
BBE12479.1|1436614_1436995_-	hypothetical protein	NA	A0A0N9HE73	Vibrio_phage	100.0	1.4e-69
BBE12480.1|1436975_1438055_-	hypothetical protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
BBE12481.1|1438186_1438522_+	HTH-type transcriptional regulator Xre	NA	A0A0N9HJE7	Vibrio_phage	100.0	4.7e-53
>prophage 3
AP018677	Vibrio cholerae V060002 DNA, complete genome	4057041	3359954	3367147	4057041		Anguillid_herpesvirus(16.67%)	9	NA	NA
BBE14150.1|3359954_3360383_-	multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
BBE14151.1|3360586_3361876_-	aminopeptidase B	NA	Q6GYZ8	Mycoplasma_phage	34.3	1.7e-34
BBE14152.1|3362095_3362290_-	Fe(2+) donor and activity modulator for cysteine desulfurase	NA	NA	NA	NA	NA
BBE14153.1|3362338_3362677_-	[2Fe-2S] ferredoxin	NA	NA	NA	NA	NA
BBE14154.1|3362690_3364541_-	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	5.3e-106
BBE14155.1|3364564_3365080_-	co-chaperone HscB	NA	NA	NA	NA	NA
BBE14156.1|3365128_3365452_-	FeS cluster assembly protein	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
BBE14157.1|3365512_3365896_-	iron-sulfur cluster assembly scaffold protein	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
BBE14158.1|3365932_3367147_-	cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	1.1e-32
>prophage 4
AP018677	Vibrio cholerae V060002 DNA, complete genome	4057041	3598776	3606000	4057041		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
BBE14351.1|3598776_3599664_+	cysteine synthase B	NA	A0A1X9I5K7	Streptococcus_phage	41.1	4.1e-56
BBE14352.1|3599934_3602520_+	methyl-directed mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.0	2.2e-33
BBE14353.1|3602612_3603620_-	RNA polymerase sigma S factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
BBE14354.1|3603693_3604629_-	lipoprotein	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
BBE14355.1|3604628_3605255_-	L-isoaspartate protein carboxylmethyltransferase type II	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	2.0e-36
BBE14356.1|3605247_3606000_-	broad specificity 5'(3')-nucleotidase and polyphosphatase	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.3	8.0e-69
>prophage 5
AP018677	Vibrio cholerae V060002 DNA, complete genome	4057041	3631654	3637958	4057041	transposase	Vibrio_phage(33.33%)	7	NA	NA
BBE14383.1|3631654_3632935_-	murein DD-endopeptidase	NA	A0A1P8BKT8	Lactococcus_phage	43.0	3.1e-12
BBE14384.1|3633630_3634155_+	hypothetical protein	NA	NA	NA	NA	NA
BBE14385.1|3634543_3634993_+|transposase	IS4 transposase	transposase	A0A1V0E8E1	Vibrio_phage	82.6	1.6e-48
BBE14386.1|3635956_3636289_+|transposase	IS911 transposase	transposase	Q716C1	Shigella_phage	66.7	8.8e-28
BBE14387.1|3636435_3636924_+|transposase	IS911 transposase	transposase	Q716C2	Shigella_phage	71.2	3.6e-62
BBE14388.1|3637235_3637676_-	ribonuclease HI	NA	A0A0H3UZB5	Geobacillus_virus	41.7	3.1e-20
BBE14389.1|3637757_3637958_-	transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	47.6	1.3e-10
