The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031010	Alteromonas sp. RKMC-009 chromosome, complete genome	4934803	520758	532476	4934803		Klosneuvirus(16.67%)	9	NA	NA
AYA62918.1|520758_521736_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	37.0	9.8e-51
AYA62919.1|521909_522443_+	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	55.5	2.0e-50
AYA62920.1|523021_524047_+	sensor histidine kinase	NA	NA	NA	NA	NA
AYA62921.1|524216_525797_+	PAS domain S-box protein	NA	A0A1B0V854	Salmonella_phage	45.6	1.5e-37
AYA62922.1|525804_526098_-	hypothetical protein	NA	NA	NA	NA	NA
AYA62923.1|526198_526615_+	S24 family peptidase	NA	A0A1L5C2A3	Pseudoalteromonas_phage	48.2	1.2e-18
AYA62924.1|526602_527859_+	DUF4113 domain-containing protein	NA	A0A1W6JNT0	Morganella_phage	41.5	5.1e-84
AYA62925.1|527943_528453_+	HAD family hydrolase	NA	NA	NA	NA	NA
AYA62926.1|528672_532476_+	response regulator	NA	A0A1V0SGX0	Hokovirus	26.3	1.3e-21
>prophage 2
CP031010	Alteromonas sp. RKMC-009 chromosome, complete genome	4934803	756933	764767	4934803		uncultured_Mediterranean_phage(33.33%)	10	NA	NA
AYA66443.1|756933_757908_-	octaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	23.7	1.1e-06
AYA63113.1|758219_758531_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
AYA63114.1|758546_758804_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
AYA63115.1|758986_760150_+	Obg family GTPase CgtA	NA	NA	NA	NA	NA
AYA66444.1|760184_760676_+	type 3 dihydrofolate reductase	NA	A0A1B2IAU3	Erwinia_phage	43.5	7.9e-25
AYA66445.1|760773_761715_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	33.8	6.6e-36
AYA66446.1|761843_762704_-	LysM peptidoglycan-binding domain-containing protein	NA	I3PV79	Clostridium_phage	35.3	8.4e-14
AYA63116.1|762722_763301_-	DedA family protein	NA	NA	NA	NA	NA
AYA63117.1|763297_763933_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	50.0	8.9e-37
AYA63118.1|764017_764767_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	54.3	3.1e-73
>prophage 3
CP031010	Alteromonas sp. RKMC-009 chromosome, complete genome	4934803	1350969	1361111	4934803		Streptococcus_phage(16.67%)	6	NA	NA
AYA63568.1|1350969_1352262_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.8	8.5e-135
AYA63569.1|1352320_1353952_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.0	2.5e-147
AYA63570.1|1354118_1356692_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	23.8	4.3e-29
AYA66486.1|1356981_1357497_+	nicotinamide-nucleotide amidohydrolase family protein	NA	B5TK85	Pseudomonas_phage	45.3	1.3e-25
AYA63571.1|1357705_1358743_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	62.5	1.7e-117
AYA63572.1|1359122_1361111_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.9	4.3e-29
>prophage 4
CP031010	Alteromonas sp. RKMC-009 chromosome, complete genome	4934803	1688201	1698167	4934803		Burkholderia_phage(14.29%)	16	NA	NA
AYA63848.1|1688201_1690970_+	hypothetical protein	NA	E5E3N5	Burkholderia_phage	43.1	1.8e-211
AYA63849.1|1691165_1691768_+	hypothetical protein	NA	K7ZRM8	Xanthomonas_citri_phage	52.2	8.0e-11
AYA63850.1|1691769_1692015_+	hypothetical protein	NA	NA	NA	NA	NA
AYA63851.1|1692120_1692537_+	single-stranded DNA-binding protein	NA	L7TJL2	Pseudomonas_virus	54.7	1.5e-29
AYA63852.1|1692588_1692771_+	hypothetical protein	NA	NA	NA	NA	NA
AYA63853.1|1692767_1693088_+	hypothetical protein	NA	NA	NA	NA	NA
AYA63854.1|1693080_1693275_+	hypothetical protein	NA	NA	NA	NA	NA
AYA63855.1|1693461_1694001_+	hypothetical protein	NA	A0A0H4IQ87	Shigella_phage	27.2	1.4e-06
AYA63856.1|1694011_1694518_+	hypothetical protein	NA	NA	NA	NA	NA
AYA63857.1|1694517_1694715_+	hypothetical protein	NA	A0A2I7R054	Vibrio_phage	53.4	1.7e-10
AYA63858.1|1694707_1694923_+	hypothetical protein	NA	NA	NA	NA	NA
AYA63859.1|1694922_1695228_+	hypothetical protein	NA	A0A023NGW0	Nitrincola_phage	53.7	1.7e-25
AYA63860.1|1695363_1695639_+	hypothetical protein	NA	NA	NA	NA	NA
AYA63861.1|1695656_1696031_+	hypothetical protein	NA	NA	NA	NA	NA
AYA66514.1|1696379_1696643_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AYA63862.1|1697171_1698167_+	recombinase XerD	NA	A0A1P8DJ76	Virus_Rctr85	30.7	1.9e-09
>prophage 5
CP031010	Alteromonas sp. RKMC-009 chromosome, complete genome	4934803	2226737	2235706	4934803		Vibrio_phage(25.0%)	10	NA	NA
AYA64277.1|2226737_2227655_-	hypothetical protein	NA	J9SG05	Escherichia_phage	64.8	2.7e-111
AYA64278.1|2227806_2228406_-	hypothetical protein	NA	A0A0B5HAG6	Vibrio_phage	54.2	1.6e-48
AYA64279.1|2228484_2230131_-	hypothetical protein	NA	S4TTM6	Salmonella_phage	48.2	4.4e-144
AYA64280.1|2230134_2230647_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64281.1|2230624_2231917_-	hypothetical protein	NA	A0A2P1JUU6	Xanthomonas_phage	37.0	6.0e-72
AYA64282.1|2232135_2233260_-	hypothetical protein	NA	M4SNG8	Pseudoalteromonas_phage	33.5	7.8e-52
AYA64283.1|2233268_2234279_-	AAA family ATPase	NA	A0A1J0GV36	Vibrio_phage	45.1	9.1e-84
AYA64284.1|2234341_2234986_-	deoxynucleotide monophosphate kinase	NA	R4VVQ5	Alteromonas_phage	39.7	5.9e-28
AYA64285.1|2235015_2235375_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64286.1|2235367_2235706_-	hypothetical protein	NA	A0A1J0MGC4	Serratia_phage	37.3	1.3e-07
>prophage 6
CP031010	Alteromonas sp. RKMC-009 chromosome, complete genome	4934803	2241138	2249276	4934803		Alteromonas_phage(33.33%)	10	NA	NA
AYA64300.1|2241138_2241576_-	dUTP diphosphatase	NA	A0A1J0GWD2	Alteromonas_phage	57.0	2.6e-35
AYA64301.1|2241772_2241976_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64302.1|2242121_2243315_-	hypothetical protein	NA	S4TRN6	Salmonella_phage	43.4	3.3e-85
AYA64303.1|2243374_2243578_-	hypothetical protein	NA	R4VJS1	Alteromonas_phage	41.9	3.1e-07
AYA64304.1|2243574_2243847_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64305.1|2243843_2244755_-	hypothetical protein	NA	C8ZKB9	Pseudomonas_phage	37.0	1.3e-52
AYA64306.1|2245191_2245482_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64307.1|2246454_2246742_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64308.1|2246980_2247676_+	hypothetical protein	NA	S4TT79	Salmonella_phage	56.3	5.0e-65
AYA64309.1|2247668_2249276_+	hypothetical protein	NA	M4SM47	Vibrio_phage	72.1	3.5e-231
>prophage 7
CP031010	Alteromonas sp. RKMC-009 chromosome, complete genome	4934803	2261596	2292904	4934803	tail,capsid	Vibrio_phage(26.67%)	21	NA	NA
AYA66550.1|2261596_2263543_+|tail	tail fiber domain-containing protein	tail	D9ICW9	Escherichia_virus	47.1	5.0e-14
AYA64324.1|2263535_2264717_+	hypothetical protein	NA	NA	NA	NA	NA
AYA64325.1|2264823_2265045_+	hypothetical protein	NA	NA	NA	NA	NA
AYA64326.1|2265146_2267279_+	chromosome partitioning protein ParB	NA	A0A1J0GV12	Vibrio_phage	58.7	1.9e-195
AYA64327.1|2267352_2267694_+	hypothetical protein	NA	C8ZKI0	Pseudomonas_phage	30.9	1.3e-05
AYA64328.1|2267699_2268839_+	hypothetical protein	NA	S4TT67	Salmonella_phage	50.2	2.4e-64
AYA64329.1|2268859_2270023_+|capsid	N4-gp56 family major capsid protein	capsid	C8ZKH8	Pseudomonas_phage	61.3	1.0e-134
AYA64330.1|2270086_2270602_+	hypothetical protein	NA	U5PWM1	Acinetobacter_phage	41.7	2.1e-28
AYA64331.1|2270605_2271769_+	hypothetical protein	NA	A0A0B5GYH3	Vibrio_phage	46.1	3.9e-14
AYA64332.1|2271826_2274223_+	hypothetical protein	NA	M4SS29	Pseudoalteromonas_phage	27.3	1.1e-34
AYA64333.1|2274232_2274646_+	hypothetical protein	NA	A0A1J0GV49	Vibrio_phage	39.4	2.4e-06
AYA64334.1|2274638_2275955_+	hypothetical protein	NA	NA	NA	NA	NA
AYA64335.1|2276023_2286598_+	hypothetical protein	NA	I7DMS7	Pseudomonas_phage	25.9	1.0e-185
AYN07602.1|2286626_2286917_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64336.1|2286942_2287179_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64337.1|2287178_2287649_-	hypothetical protein	NA	NA	NA	NA	NA
AYA64338.1|2287645_2288203_-	hypothetical protein	NA	A0A2H4P7J7	Pseudomonas_phage	47.6	3.1e-41
AYA64339.1|2288202_2288940_-	hypothetical protein	NA	S4TNI3	Salmonella_phage	46.4	2.5e-46
AYA64340.1|2288953_2289685_-	hypothetical protein	NA	M4SNJ2	Pseudoalteromonas_phage	66.3	4.0e-89
AYA64341.1|2289744_2291913_-	DUF3987 domain-containing protein	NA	M4SL41	Vibrio_phage	48.5	6.3e-199
AYA64342.1|2291914_2292904_-	hypothetical protein	NA	A0A0A0YPX0	Escherichia_phage	45.8	2.1e-85
