The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP030028	Bacillus sp. Y1 chromosome, complete genome	5028825	346053	354563	5028825		Synechococcus_phage(33.33%)	8	NA	NA
AYA74291.1|346053_347346_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	31.9	1.1e-17
AYA74292.1|347571_348291_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A127KMU1	Cyanophage	48.2	1.8e-49
AYA74293.1|348283_348538_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AYA74294.1|348534_349218_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
AYA74295.1|349201_351421_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.9	4.5e-160
AYA74296.1|351405_352818_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	30.7	7.3e-47
AYA74297.1|352922_353948_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	41.5	2.0e-62
AYA74298.1|353960_354563_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.7	1.8e-26
>prophage 2
CP030028	Bacillus sp. Y1 chromosome, complete genome	5028825	659184	667690	5028825		Bacillus_phage(28.57%)	10	NA	NA
AYA74556.1|659184_659988_+	nucleotidyltransferase domain-containing protein	NA	Q8SCS5	Pseudomonas_phage	41.0	3.3e-36
AYA74557.1|660085_660268_+	DUF3934 domain-containing protein	NA	NA	NA	NA	NA
AYA74558.1|660292_660799_+	putative metal-dependent hydrolase	NA	D0R7I3	Paenibacillus_phage	49.1	1.3e-22
AYA74559.1|660867_661554_-	hemin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	6.9e-35
AYA74560.1|661555_662590_-	ABC transporter permease	NA	NA	NA	NA	NA
AYA74561.1|662770_664150_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.3	1.9e-44
AYA74562.1|664149_664827_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	52.3	1.7e-62
AYA74563.1|665038_665989_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	51.9	4.8e-87
AYA74564.1|665981_666932_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AYA74565.1|666928_667690_+	iron ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.0	7.2e-17
>prophage 3
CP030028	Bacillus sp. Y1 chromosome, complete genome	5028825	2989116	2996444	5028825		Tetraselmis_virus(33.33%)	8	NA	NA
AYA76558.1|2989116_2991342_+	formate acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	44.3	6.3e-186
AYA76559.1|2991403_2992144_+	pyruvate formate lyase-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	31.1	5.0e-31
AYA76560.1|2992179_2993004_-	NAD(+) synthase	NA	G3MA24	Bacillus_virus	60.9	3.7e-91
AYA76561.1|2993016_2994486_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.5	1.8e-120
AYA76562.1|2994664_2994955_+	hypothetical protein	NA	NA	NA	NA	NA
AYA76563.1|2994980_2995679_+	OxaA precursor	NA	NA	NA	NA	NA
AYA76564.1|2995713_2996061_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	36.1	1.9e-09
AYA76565.1|2996057_2996444_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	34.7	3.0e-11
>prophage 4
CP030028	Bacillus sp. Y1 chromosome, complete genome	5028825	3785785	3794103	5028825		Bacillus_phage(33.33%)	9	NA	NA
AYA77315.1|3785785_3787378_-	hypothetical protein	NA	A0A288WFZ3	Bacillus_phage	29.3	1.6e-37
AYA77316.1|3787727_3788045_-	YolD-like family protein	NA	NA	NA	NA	NA
AYA77317.1|3788152_3789004_-	hypothetical protein	NA	A0A2R4P8H7	Staphylococcus_phage	43.9	1.0e-43
AYA77318.1|3789152_3791528_-	hypothetical protein	NA	A0A2H4J056	uncultured_Caudovirales_phage	35.5	3.7e-128
AYA77319.1|3791529_3792159_-	hypothetical protein	NA	S6B1Q4	Bacillus_phage	40.7	7.5e-20
AYA77320.1|3792171_3792579_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77321.1|3792676_3792883_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77322.1|3792869_3793709_-	hypothetical protein	NA	E5DV70	Deep-sea_thermophilic_phage	43.3	1.4e-53
AYA77323.1|3793872_3794103_+	transcriptional regulator	NA	B3RH35	Bacillus_virus	56.2	1.0e-19
>prophage 5
CP030028	Bacillus sp. Y1 chromosome, complete genome	5028825	3798788	3852882	5028825	tail,capsid,portal	Bacillus_phage(35.56%)	70	NA	NA
AYA77329.1|3798788_3799007_-	hypothetical protein	NA	R9TLP0	Paenibacillus_phage	43.3	7.1e-10
AYA77330.1|3799008_3799974_-	N-acetylmuramoyl-L-alanine amidase	NA	D6QWP2	uncultured_phage	70.2	7.6e-72
AYA77331.1|3800062_3800329_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77332.1|3800331_3800517_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77333.1|3800520_3802497_-	hypothetical protein	NA	A0A0U4JID8	Exiguobacterium_phage	41.6	9.1e-96
AYA77334.1|3802543_3804535_-	hypothetical protein	NA	A0A0A0RS40	Bacillus_phage	32.7	4.1e-27
AYA78603.1|3804550_3805324_-|tail	phage tail family protein	tail	A6M962	Geobacillus_virus	50.8	2.7e-64
AYA77335.1|3805377_3808128_-|tail	phage tail tape measure protein	tail	A0A1B1P7S6	Bacillus_phage	37.4	2.0e-72
AYA77336.1|3808162_3809677_-	hypothetical protein	NA	G9J2C6	Bacillus_phage	34.3	1.8e-35
AYA77337.1|3809908_3810187_-	hypothetical protein	NA	NA	NA	NA	NA
AYA78604.1|3810240_3810573_-	hypothetical protein	NA	A0A0N9SST2	Paenibacillus_phage	42.5	2.6e-19
AYA77338.1|3810668_3811196_-	hypothetical protein	NA	A0A0N9SHI3	Paenibacillus_phage	63.1	2.1e-55
AYA77339.1|3811238_3811619_-	hypothetical protein	NA	A0A0N7GFE5	Paenibacillus_phage	50.8	5.3e-29
AYA78605.1|3811615_3812008_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77340.1|3812046_3812379_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77341.1|3812380_3812770_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77342.1|3812782_3812986_-	hypothetical protein	NA	A0A2H4IZN9	uncultured_Caudovirales_phage	55.9	1.3e-10
AYA77343.1|3814208_3814889_-	hypothetical protein	NA	A0A2H4IZP8	uncultured_Caudovirales_phage	39.4	9.6e-21
AYA77344.1|3814984_3815857_-|capsid	minor capsid protein	capsid	A0A0N9SJR1	Paenibacillus_phage	48.4	1.9e-69
AYA77345.1|3815859_3817446_-|portal	portal protein	portal	A0A2H4J180	uncultured_Caudovirales_phage	60.3	4.0e-187
AYA77346.1|3817462_3819109_-	hypothetical protein	NA	A0A0N9RZA7	Paenibacillus_phage	51.9	3.6e-138
AYA77347.1|3819819_3820224_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77348.1|3820609_3821467_-	hypothetical protein	NA	A0A0N9S810	Paenibacillus_phage	53.0	5.7e-79
AYA77349.1|3821549_3822494_-	hypothetical protein	NA	A0A173H0P2	Pseudoalteromonas_phage	50.6	3.8e-84
AYA77350.1|3822680_3823136_-	hypothetical protein	NA	A0A2H4J2L4	uncultured_Caudovirales_phage	40.7	1.6e-11
AYA77351.1|3823132_3823528_-	RNA polymerase subunit sigma	NA	A0A0N9RZI0	Paenibacillus_phage	41.7	2.2e-17
AYA77352.1|3823527_3824712_-	hypothetical protein	NA	A0A218KDB3	Bacillus_phage	66.7	8.0e-156
AYA77353.1|3824726_3825011_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77354.1|3825024_3825933_-	hypothetical protein	NA	A0A0E3T7R2	Bacillus_phage	60.9	1.5e-109
AYA77355.1|3826012_3826375_+	hypothetical protein	NA	NA	NA	NA	NA
AYA77356.1|3826415_3827126_-	hypothetical protein	NA	S0A0R4	Cellulophaga_phage	37.0	1.7e-28
AYA77357.1|3827202_3827775_-	dephospho-CoA kinase	NA	J9Q953	Bacillus_phage	43.8	1.1e-38
AYA77358.1|3827771_3828212_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77359.1|3828208_3828514_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JBC0	uncultured_Caudovirales_phage	37.2	2.8e-12
AYA77360.1|3828510_3828900_-	hypothetical protein	NA	A0A127AW72	Bacillus_phage	44.7	2.2e-14
AYA77361.1|3828935_3829673_-	FAD-dependent thymidylate synthase	NA	A0A142F1S2	Bacillus_phage	68.9	1.1e-89
AYA77362.1|3829849_3830287_-	dUTP diphosphatase	NA	D2XR49	Bacillus_phage	46.5	1.8e-33
AYA77363.1|3830456_3830639_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77364.1|3830653_3830950_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77365.1|3830962_3831157_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77366.1|3831157_3831901_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77367.1|3831957_3832611_-	phosphate starvation-inducible protein PhoH	NA	F8WPX9	Bacillus_phage	47.6	2.9e-43
AYA77368.1|3832611_3832920_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77369.1|3833083_3835423_-	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	NA	A0A218MKA9	uncultured_virus	30.4	4.5e-78
AYA77370.1|3835423_3835639_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77371.1|3835635_3836127_-	hypothetical protein	NA	A0A0N9ST03	Paenibacillus_phage	51.4	9.1e-13
AYA77372.1|3836123_3836315_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77373.1|3836314_3837292_-	hypothetical protein	NA	A0A0N9SHN6	Paenibacillus_phage	56.7	1.4e-86
AYA77374.1|3837275_3837509_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77375.1|3837505_3837775_-	hypothetical protein	NA	A0A2H4IZK0	uncultured_Caudovirales_phage	43.3	7.6e-14
AYA77376.1|3837771_3838254_-	Fis family transcriptional regulator	NA	A0A0E3M1E6	Bacillus_phage	45.3	7.0e-26
AYA77377.1|3838231_3840409_-	DNA-directed DNA polymerase	NA	A0A142F1Q9	Bacillus_phage	52.1	1.5e-200
AYA77378.1|3840418_3840640_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77379.1|3840639_3841176_-	hypothetical protein	NA	A0A0N9SIQ5	Paenibacillus_phage	30.8	4.0e-06
AYA77380.1|3841178_3841595_-	hypothetical protein	NA	A0A0N9RZF9	Paenibacillus_phage	43.5	1.3e-23
AYA77381.1|3841761_3842532_-	hypothetical protein	NA	A0A2H4IZK6	uncultured_Caudovirales_phage	51.6	6.1e-56
AYA77382.1|3843189_3843816_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AYA77383.1|3844161_3845376_-	hypothetical protein	NA	A0A288WGM1	Bacillus_phage	42.6	2.3e-81
AYA77384.1|3845492_3845705_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AYA78606.1|3845771_3845954_+	hypothetical protein	NA	NA	NA	NA	NA
AYA77385.1|3845960_3846944_-	hypothetical protein	NA	A0A2H4J6E6	uncultured_Caudovirales_phage	48.1	1.2e-75
AYA77386.1|3846995_3847484_-	hypothetical protein	NA	S5M5Q5	Brevibacillus_phage	40.0	4.9e-11
AYA77387.1|3847726_3849076_-	DNA helicase	NA	A0A2H4IZL9	uncultured_Caudovirales_phage	57.1	1.2e-142
AYA77388.1|3849412_3849946_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77389.1|3849942_3850140_-	hypothetical protein	NA	A0A0K2CZZ9	Bacillus_phage	52.0	8.3e-10
AYA77390.1|3850258_3850672_-	hypothetical protein	NA	Q5YA89	Bacillus_phage	36.4	1.5e-13
AYA77391.1|3850672_3851437_-	DNA replication protein	NA	A0A0N7GFF0	Paenibacillus_phage	53.9	1.3e-74
AYA77392.1|3851565_3851979_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77393.1|3852277_3852493_-	hypothetical protein	NA	NA	NA	NA	NA
AYA77394.1|3852507_3852882_-	hypothetical protein	NA	R4JGJ3	Bacillus_phage	31.2	1.9e-07
>prophage 6
CP030028	Bacillus sp. Y1 chromosome, complete genome	5028825	4457400	4464237	5028825		Streptococcus_phage(33.33%)	8	NA	NA
AYA77876.1|4457400_4457949_-	hypothetical protein	NA	A0A1U9WQI6	Geobacillus_phage	36.3	8.3e-23
AYA77877.1|4458631_4459240_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	56.5	5.9e-54
AYA77878.1|4459291_4459549_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AYA77879.1|4459590_4460544_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	38.8	3.5e-53
AYA77880.1|4460581_4461565_-	hypothetical protein	NA	A1IMD5	Streptococcus_phage	43.9	8.3e-66
AYA77881.1|4461561_4462455_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.1	2.0e-05
AYA77882.1|4462467_4462926_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AYA77883.1|4463286_4464237_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	54.5	7.5e-88
