assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003589785.1_ASM358978v1	CP032384	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 chromosome, complete genome	1	2946819-2947089	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DinG,WYL,DEDDh,cas3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAAC,GTGTTCCCCGCGCCAGCGGGGATAAAC	29,27,27	0	0	NA	NA	I-E:I-E:I-E	3,4,4	4	TypeI-E	DinG,WYL,DEDDh,cas3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas14j	NA,NA|57aa|down_2|CP032384.1_2948365_2948536_+,NA|73aa|down_5|CP032384.1_2952328_2952547_-,NA|69aa|down_8|CP032384.1_2954364_2954571_-	NA|179aa|up_9|CP032384.1_2935365_2935902_-	PRK15260, PRK15260, fimbrial protein SteF; Provisional	NA|157aa|up_8|CP032384.1_2935898_2936369_-	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|169aa|up_7|CP032384.1_2936383_2936890_-	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|258aa|up_6|CP032384.1_2936909_2937683_-	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|900aa|up_5|CP032384.1_2937695_2940395_-	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|196aa|up_4|CP032384.1_2940474_2941062_-	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|267aa|up_3|CP032384.1_2941668_2942469_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|CP032384.1_2942696_2944334_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|CP032384.1_2944416_2945715_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|CP032384.1_2945850_2946522_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|CP032384.1_2947189_2947987_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|CP032384.1_2948074_2948437_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|57aa|down_2|CP032384.1_2948365_2948536_+	NA	NA|600aa|down_3|CP032384.1_2948860_2950660_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_4|CP032384.1_2950659_2952372_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|73aa|down_5|CP032384.1_2952328_2952547_-	NA	NA|245aa|down_6|CP032384.1_2952473_2953208_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_7|CP032384.1_2953295_2954249_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|69aa|down_8|CP032384.1_2954364_2954571_-	NA	cas8e|519aa|down_9|CP032384.1_2957367_2958924_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1
GCA_003589785.1_ASM358978v1	CP032384	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 chromosome, complete genome	2	2963249-2963397	2	CRISPRCasFinder	no	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DinG,WYL,DEDDh,cas3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAAC	27	0	0	NA	NA	I-E	2	2	TypeI-E	DinG,WYL,DEDDh,cas3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas14j	NA|69aa|up_7|CP032384.1_2954364_2954571_-,NA	NA|245aa|up_9|CP032384.1_2952473_2953208_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_8|CP032384.1_2953295_2954249_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|69aa|up_7|CP032384.1_2954364_2954571_-	NA	cas8e|519aa|up_6|CP032384.1_2957367_2958924_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|187aa|up_5|CP032384.1_2958920_2959481_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|353aa|up_4|CP032384.1_2959494_2960553_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|CP032384.1_2960563_2961310_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|CP032384.1_2961291_2961942_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|CP032384.1_2961938_2962859_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|CP032384.1_2962858_2963152_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|CP032384.1_2963413_2964460_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP032384.1_2964710_2965619_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|CP032384.1_2965628_2967068_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP032384.1_2967054_2967660_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|CP032384.1_2967677_2968034_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP032384.1_2968224_2968536_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|CP032384.1_2968554_2969265_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP032384.1_2969264_2969744_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP032384.1_2969740_2970790_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP032384.1_2970770_2971532_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_003589785.1_ASM358978v1	CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	1	39348-39467	1	CRISPRCasFinder	no		cas14j	Orphan	TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	43	0	0	NA	NA	NA	1	1	Orphan	DinG,WYL,DEDDh,cas3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas14j	NA|112aa|up_7|CP032386.1_33416_33752_+,NA|60aa|up_3|CP032386.1_36878_37058_+,NA|118aa|up_2|CP032386.1_37282_37636_-,NA|149aa|up_1|CP032386.1_37772_38219_-,NA|67aa|down_0|CP032386.1_40133_40334_+,NA|108aa|down_3|CP032386.1_40998_41322_+,NA|82aa|down_4|CP032386.1_41366_41612_+,NA|110aa|down_6|CP032386.1_41909_42239_+,NA|60aa|down_7|CP032386.1_42281_42461_+,NA|66aa|down_8|CP032386.1_42482_42680_+,NA|91aa|down_9|CP032386.1_42692_42965_+	NA|372aa|up_9|CP032386.1_31615_32731_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|139aa|up_8|CP032386.1_32816_33233_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|112aa|up_7|CP032386.1_33416_33752_+	NA	NA|189aa|up_6|CP032386.1_33808_34375_+	pfam11140, DUF2913, Protein of unknown function (DUF2913)	NA|207aa|up_5|CP032386.1_35741_36362_+	cd02042, ParAB_family, partition proteins ParAB family	NA|77aa|up_4|CP032386.1_36413_36644_+	pfam09274, ParG, ParG	NA|60aa|up_3|CP032386.1_36878_37058_+	NA	NA|118aa|up_2|CP032386.1_37282_37636_-	NA	NA|149aa|up_1|CP032386.1_37772_38219_-	NA	NA|279aa|up_0|CP032386.1_38258_39095_-	pfam01051, Rep_3, Initiator Replication protein	NA|67aa|down_0|CP032386.1_40133_40334_+	NA	NA|84aa|down_1|CP032386.1_40330_40582_+	PRK02854, PRK02854, primosomal protein DnaT	NA|94aa|down_2|CP032386.1_40571_40853_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|108aa|down_3|CP032386.1_40998_41322_+	NA	NA|82aa|down_4|CP032386.1_41366_41612_+	NA	NA|72aa|down_5|CP032386.1_41601_41817_+	TIGR03830, transcriptional_regulator_XRE_family, putative zinc finger/helix-turn-helix protein, YgiT family	NA|110aa|down_6|CP032386.1_41909_42239_+	NA	NA|60aa|down_7|CP032386.1_42281_42461_+	NA	NA|66aa|down_8|CP032386.1_42482_42680_+	NA	NA|91aa|down_9|CP032386.1_42692_42965_+	NA
