assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003589945.1_ASM358994v1	CP032400	Streptococcus iniae strain YM011 chromosome, complete genome	1	232119-232260	1	CRISPRCasFinder	no		DinG,csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,csm6	Orphan	GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAA	43	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,csm6	NA,NA	NA|437aa|up_9|CP032400.1_221635_222946_-	pfam09913, DUF2142, Predicted membrane protein (DUF2142)	NA|327aa|up_8|CP032400.1_222981_223962_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|409aa|up_7|CP032400.1_223954_225181_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|422aa|up_6|CP032400.1_225207_226473_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|389aa|up_5|CP032400.1_226492_227659_-	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|269aa|up_4|CP032400.1_227658_228465_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|311aa|up_3|CP032400.1_228467_229400_-	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|385aa|up_2|CP032400.1_229389_230544_-	cd04955, GT4-like, glycosyltransferase family 4 proteins	NA|285aa|up_1|CP032400.1_230661_231516_-	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|113aa|up_0|CP032400.1_231609_231948_-	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]	NA|370aa|down_0|CP032400.1_232323_233433_-	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated	NA|604aa|down_1|CP032400.1_233441_235253_-	PRK05667, dnaG, DNA primase; Validated	NA|126aa|down_2|CP032400.1_235381_235759_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|69aa|down_3|CP032400.1_236026_236233_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|1216aa|down_4|CP032400.1_236336_239984_-	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|1079aa|down_5|CP032400.1_239980_243217_-	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B	NA|308aa|down_6|CP032400.1_243380_244304_+	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase	NA|224aa|down_7|CP032400.1_244334_245006_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|357aa|down_8|CP032400.1_245014_246085_-	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|127aa|down_9|CP032400.1_246087_246468_-	pfam02566, OsmC, OsmC-like protein
GCA_003589945.1_ASM358994v1	CP032400	Streptococcus iniae strain YM011 chromosome, complete genome	2	1968295-1969254	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	DinG,csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,csm6	Type II-A,Type II-C,Type II-B	GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC,GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC,GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	14,14,10	14	TypeII-A,TypeII-C,TypeII-B	DinG,csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,csm6	NA|72aa|up_4|CP032400.1_1961792_1962008_+,NA|84aa|down_1|CP032400.1_1969821_1970073_-,NA|206aa|down_9|CP032400.1_1977585_1978203_+	NA|219aa|up_9|CP032400.1_1957742_1958399_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|377aa|up_8|CP032400.1_1958441_1959572_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|245aa|up_7|CP032400.1_1959589_1960324_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|256aa|up_6|CP032400.1_1960333_1961101_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|214aa|up_5|CP032400.1_1961097_1961739_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|72aa|up_4|CP032400.1_1961792_1962008_+	NA	cas9|1369aa|up_3|CP032400.1_1962223_1966330_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|289aa|up_2|CP032400.1_1966329_1967196_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|110aa|up_1|CP032400.1_1967207_1967537_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|221aa|up_0|CP032400.1_1967526_1968189_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|141aa|down_0|CP032400.1_1969350_1969773_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|84aa|down_1|CP032400.1_1969821_1970073_-	NA	NA|611aa|down_2|CP032400.1_1970452_1972285_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|148aa|down_3|CP032400.1_1972395_1972839_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|219aa|down_4|CP032400.1_1972841_1973498_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_5|CP032400.1_1973517_1973982_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|375aa|down_6|CP032400.1_1974221_1975346_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|282aa|down_7|CP032400.1_1975428_1976274_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|340aa|down_8|CP032400.1_1976382_1977402_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|206aa|down_9|CP032400.1_1977585_1978203_+	NA
