The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031450	Pseudomonas fluorescens strain SIK_W1 chromosome, complete genome	6791087	1292157	1377245	6791087	holin,plate,lysis,tRNA,tail,transposase	uncultured_Caudovirales_phage(23.33%)	82	NA	NA
AYF47124.1|1292157_1292628_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AYF47125.1|1293406_1294516_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	38.4	4.1e-21
AYF47126.1|1294512_1295433_-	ornithine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	28.4	6.5e-20
AYF47127.1|1295866_1297975_+	molybdopterin oxidoreductase family protein	NA	NA	NA	NA	NA
AYF47128.1|1298061_1298400_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
AYF47129.1|1298477_1298948_-	bacterioferritin	NA	NA	NA	NA	NA
AYF47130.1|1299149_1299368_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AYF47131.1|1299612_1300215_+	peroxiredoxin	NA	NA	NA	NA	NA
AYF47132.1|1301470_1301689_+	hypothetical protein	NA	NA	NA	NA	NA
AYF47133.1|1301678_1302350_-	ribonuclease T	NA	NA	NA	NA	NA
AYF47134.1|1302346_1303393_-	dihydroorotase	NA	NA	NA	NA	NA
AYF47135.1|1303549_1304458_+	OmpA family protein	NA	NA	NA	NA	NA
AYF47136.1|1304600_1305818_+	argininosuccinate synthase	NA	NA	NA	NA	NA
AYF47137.1|1306433_1307066_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AYF47138.1|1307139_1307322_-	hypothetical protein	NA	NA	NA	NA	NA
AYF47139.1|1307429_1308068_-	endonuclease III	NA	NA	NA	NA	NA
AYF47140.1|1308196_1309360_-	electron transport complex subunit RsxB	NA	NA	NA	NA	NA
AYF47141.1|1309776_1311828_-|tRNA	methionine--tRNA ligase	tRNA	NA	NA	NA	NA
AYF47142.1|1312000_1313095_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AYF47143.1|1313592_1313916_-	ferredoxin family protein	NA	NA	NA	NA	NA
AYF47144.1|1314058_1316650_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	22.5	5.6e-29
AYF47145.1|1316860_1318006_-	class A beta-lactamase-related serine hydrolase	NA	A0A2K9L1U3	Tupanvirus	25.9	6.4e-17
AYF47146.1|1318063_1319131_-	fatty acid desaturase	NA	NA	NA	NA	NA
AYF47147.1|1319443_1320004_+|transposase	transposase	transposase	A0A1B0V7I5	Salmonella_phage	46.7	7.9e-21
AYF47148.1|1320163_1320898_+	XRE family transcriptional regulator	NA	B5TK58	Pseudomonas_phage	88.1	1.7e-119
AYF47149.1|1321499_1321844_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	82.8	1.5e-46
AYF47150.1|1321865_1322381_+	hypothetical protein	NA	NA	NA	NA	NA
AYF47151.1|1322384_1322996_+|plate	phage baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	55.3	4.3e-44
AYF47152.1|1323005_1323338_+|plate	phage baseplate protein	plate	A0A2H4JI46	uncultured_Caudovirales_phage	66.4	3.3e-35
AYF47153.1|1323334_1324330_+|plate	baseplate J protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	63.5	3.0e-111
AYF47154.1|1324326_1324956_+|tail	phage tail protein I	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	53.7	2.6e-44
AYF47155.1|1324956_1326402_+	hypothetical protein	NA	A0A1W6JT73	Escherichia_phage	24.4	7.5e-31
AYF47156.1|1326411_1326843_+	hypothetical protein	NA	NA	NA	NA	NA
AYF47157.1|1326927_1327128_+	hypothetical protein	NA	NA	NA	NA	NA
AYF47158.1|1327130_1328297_+|tail	phage tail protein	tail	B0ZSG8	Halomonas_phage	57.5	7.2e-125
AYF47159.1|1328296_1328803_+|tail	phage tail protein	tail	Q6R4W3	Vibrio_virus	33.9	7.1e-21
AYF47160.1|1328985_1329558_+|tail	phage tail assembly protein	tail	B0ZSH0	Halomonas_phage	38.8	5.2e-28
AYF47161.1|1329686_1330838_+	hypothetical protein	NA	NA	NA	NA	NA
AYF47162.1|1330837_1331221_+	hypothetical protein	NA	B0ZSH2	Halomonas_phage	56.7	1.0e-35
AYF47163.1|1331213_1331426_+|tail	phage tail protein	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	61.4	1.4e-18
AYF47164.1|1331435_1332446_+	phage late control D family protein	NA	A0A2H4JH05	uncultured_Caudovirales_phage	52.3	1.3e-93
AYF51835.1|1332467_1333025_+	glycoside hydrolase family 19 protein	NA	B5TK83	Pseudomonas_phage	73.8	2.8e-74
AYF47165.1|1333012_1333483_+|lysis	lysis protein	lysis	A0A2H4IZW4	uncultured_Caudovirales_phage	57.5	4.9e-32
AYF47166.1|1333564_1334065_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	83.1	3.7e-70
AYF47167.1|1334148_1335207_+	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	62.4	2.4e-111
AYF47168.1|1335215_1335683_+	recombination regulator RecX	NA	NA	NA	NA	NA
AYF47169.1|1335943_1337092_+|transposase	transposase	transposase	NA	NA	NA	NA
AYF47170.1|1337244_1338357_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA	NA
AYF47171.1|1338734_1339175_-	hypothetical protein	NA	NA	NA	NA	NA
AYF47172.1|1339353_1340073_+	DTW domain-containing protein	NA	NA	NA	NA	NA
AYF47173.1|1341050_1341413_+	diacylglycerol kinase	NA	NA	NA	NA	NA
AYF47174.1|1341416_1342403_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYF47175.1|1342467_1343247_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AYF47176.1|1343328_1344024_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
AYF47177.1|1344088_1344550_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	52.0	2.0e-38
AYF47178.1|1344618_1345329_-	RNA-binding protein	NA	NA	NA	NA	NA
AYF47179.1|1345512_1345983_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYF47180.1|1346086_1347388_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AYF47181.1|1347568_1347904_-	putative addiction module antidote protein	NA	NA	NA	NA	NA
AYF47182.1|1347900_1348224_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	40.4	4.1e-14
AYF47183.1|1348633_1350535_+	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	33.2	8.5e-75
AYF47184.1|1350744_1351851_+	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA	NA
AYF47185.1|1352124_1352310_+	hypothetical protein	NA	NA	NA	NA	NA
AYF47186.1|1352362_1353988_-	glucan biosynthesis protein D	NA	NA	NA	NA	NA
AYF47187.1|1354356_1356219_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AYF47188.1|1356338_1357763_-	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA	NA
AYF47189.1|1357923_1358733_-	ABC transporter permease	NA	NA	NA	NA	NA
AYF47190.1|1358722_1359652_-	ABC transporter permease	NA	NA	NA	NA	NA
AYF47191.1|1359653_1360688_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.5	5.2e-26
AYF47192.1|1360895_1362047_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
AYF47193.1|1362272_1363760_-	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA	NA
AYF47194.1|1363862_1364774_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYF47195.1|1364942_1365650_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
AYF47196.1|1365861_1367484_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
AYF47197.1|1367483_1367996_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AYF47198.1|1367992_1369255_+	chemotaxis protein CheR	NA	NA	NA	NA	NA
AYF47199.1|1369251_1369953_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AYF47200.1|1369949_1372235_+	hybrid sensor histidine kinase/response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	27.4	9.8e-09
AYF47201.1|1372231_1373239_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AYF47202.1|1373290_1374292_+	PleD family two-component system response regulator	NA	A0A127AWB9	Bacillus_phage	35.2	2.1e-16
AYF47203.1|1374556_1375651_+	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	46.6	2.0e-07
AYF47204.1|1375745_1377245_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	40.1	7.2e-85
>prophage 2
CP031450	Pseudomonas fluorescens strain SIK_W1 chromosome, complete genome	6791087	1452351	1457311	6791087		uncultured_Mediterranean_phage(33.33%)	7	NA	NA
AYF47271.1|1452351_1453101_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.4	4.1e-65
AYF47272.1|1453100_1453778_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.5	6.8e-43
AYF47273.1|1453986_1454823_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	33.3	1.1e-05
AYF47274.1|1454929_1455934_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	36.2	1.3e-34
AYF47275.1|1455872_1456094_-	hypothetical protein	NA	NA	NA	NA	NA
AYF47276.1|1456145_1456355_-	cold-shock protein CapB	NA	Q9AZD3	Lactococcus_phage	66.7	2.2e-16
AYF47277.1|1456744_1457311_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	73.3	3.7e-74
>prophage 3
CP031450	Pseudomonas fluorescens strain SIK_W1 chromosome, complete genome	6791087	3868105	3927371	6791087	transposase,plate,protease	Planktothrix_phage(40.0%)	53	NA	NA
AYF49243.1|3868105_3869434_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AYF51926.1|3869435_3869915_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AYF49244.1|3869920_3871090_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AYF49245.1|3871106_3871238_-	type VI secretion protein	NA	NA	NA	NA	NA
AYF49246.1|3871279_3872812_-	GAF domain-containing protein	NA	NA	NA	NA	NA
AYF49247.1|3872808_3875241_-	AAA family ATPase	NA	H6X3M6	Enterobacteria_phage	32.9	4.3e-95
AYF49248.1|3875253_3876261_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AYF49249.1|3876224_3878012_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AYF51927.1|3878001_3878403_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AYF49250.1|3878417_3879893_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AYF49251.1|3879921_3880419_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AYF49252.1|3880451_3882005_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AYF49253.1|3882483_3882999_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
AYF49254.1|3883051_3883873_-	aldo/keto reductase	NA	NA	NA	NA	NA
AYF49255.1|3883979_3884474_+	DUF1543 domain-containing protein	NA	NA	NA	NA	NA
AYF49256.1|3884578_3885679_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYF49257.1|3885704_3887123_+	aminotransferase	NA	NA	NA	NA	NA
AYF49258.1|3887188_3888034_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AYF49259.1|3888121_3888403_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AYF49260.1|3888533_3890393_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYF49261.1|3890392_3891454_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA	NA
AYF49262.1|3891450_3892476_+	ABC transporter permease	NA	NA	NA	NA	NA
AYF49263.1|3892486_3894058_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	2.1e-18
AYF49264.1|3894196_3895603_+	PAS domain-containing protein	NA	NA	NA	NA	NA
AYF49265.1|3895889_3897281_+	GntP family permease	NA	NA	NA	NA	NA
AYF49266.1|3897288_3898062_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AYF49267.1|3898128_3900081_+	acetoacetate--CoA ligase	NA	NA	NA	NA	NA
AYF49268.1|3900223_3902761_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AYF49269.1|3902804_3903080_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AYF49270.1|3903263_3904412_-|transposase	transposase	transposase	NA	NA	NA	NA
AYF49271.1|3904619_3905528_-	sugar kinase	NA	NA	NA	NA	NA
AYF49272.1|3905623_3906832_-	amino acid deaminase	NA	NA	NA	NA	NA
AYF49273.1|3906841_3907606_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AYF49274.1|3907773_3908163_-	RidA family protein	NA	NA	NA	NA	NA
AYF49275.1|3908189_3908972_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.4	1.5e-30
AYF49276.1|3908968_3909631_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AYF49277.1|3909642_3910305_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AYF49278.1|3910357_3911206_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYF49279.1|3911611_3911866_+	hypothetical protein	NA	NA	NA	NA	NA
AYF49280.1|3912251_3913820_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	42.5	2.6e-37
AYF49281.1|3914196_3915177_-	sugar-binding transcriptional regulator	NA	NA	NA	NA	NA
AYF49282.1|3915240_3915702_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
AYF49283.1|3915985_3917473_+	sugar ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AYF49284.1|3917469_3918456_+	ABC transporter permease	NA	NA	NA	NA	NA
AYF49285.1|3918490_3919498_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYF49286.1|3919640_3920396_+	D-threitol dehydrogenase	NA	NA	NA	NA	NA
AYF49287.1|3920422_3921538_+	erythritol/L-threitol dehydrogenase	NA	NA	NA	NA	NA
AYF49288.1|3921607_3922609_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA	NA
AYF49289.1|3922612_3923260_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA	NA
AYF49290.1|3923216_3924113_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYF49291.1|3924216_3924702_+	heme-binding protein	NA	NA	NA	NA	NA
AYF49292.1|3924698_3926231_+	MFS transporter	NA	NA	NA	NA	NA
AYF49293.1|3926345_3927371_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	31.5	5.5e-20
>prophage 4
CP031450	Pseudomonas fluorescens strain SIK_W1 chromosome, complete genome	6791087	6253439	6304862	6791087	holin,protease	Tupanvirus(20.0%)	47	NA	NA
AYF51316.1|6253439_6253940_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
AYF51317.1|6254113_6255001_+	acyltransferase	NA	NA	NA	NA	NA
AYF51318.1|6254997_6255570_-	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
AYF51999.1|6255826_6256342_+	RNA polymerase subunit sigma-70	NA	NA	NA	NA	NA
AYF51319.1|6256338_6257016_+	anti-sigma factor	NA	NA	NA	NA	NA
AYF51320.1|6257092_6257551_+	hypothetical protein	NA	NA	NA	NA	NA
AYF51321.1|6257690_6258095_+	DUF3757 domain-containing protein	NA	NA	NA	NA	NA
AYF51322.1|6258320_6259295_+	hypothetical protein	NA	NA	NA	NA	NA
AYF51323.1|6259295_6259664_+	hypothetical protein	NA	NA	NA	NA	NA
AYF51324.1|6259699_6260899_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	29.7	2.2e-12
AYF51325.1|6261077_6261935_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AYF51326.1|6262060_6262693_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
AYF51327.1|6262825_6265843_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
AYF51328.1|6265839_6266142_-	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA	NA
AYF51329.1|6266157_6267408_-	sarcosine oxidase subunit beta	NA	NA	NA	NA	NA
AYF51330.1|6267430_6268684_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.2	2.7e-101
AYF51331.1|6268920_6269649_-	conjugal transfer protein TraX	NA	NA	NA	NA	NA
AYF51332.1|6269739_6270780_+	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
AYF51333.1|6270974_6271175_+	hypothetical protein	NA	NA	NA	NA	NA
AYF51334.1|6271301_6272402_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
AYF51335.1|6272431_6272641_+	protein GbcA	NA	NA	NA	NA	NA
AYF51336.1|6272684_6273980_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
AYF51337.1|6274874_6275645_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
AYF51338.1|6275655_6276876_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
AYF51339.1|6276875_6278816_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA	NA
AYF51340.1|6278971_6281032_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
AYF51341.1|6281048_6281579_-	hydrocarbon binding protein	NA	NA	NA	NA	NA
AYF51342.1|6281792_6282770_-	membrane dipeptidase	NA	NA	NA	NA	NA
AYF51343.1|6282988_6283390_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
AYF51344.1|6283431_6283848_+	DUF3010 family protein	NA	NA	NA	NA	NA
AYF51345.1|6283971_6285138_-	hypothetical protein	NA	NA	NA	NA	NA
AYF52000.1|6285206_6286184_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
AYF51346.1|6286344_6287289_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
AYF51347.1|6287363_6288251_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
AYF51348.1|6288396_6289362_+	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
AYF51349.1|6289480_6289960_+	thioesterase	NA	NA	NA	NA	NA
AYF51350.1|6289969_6291130_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
AYF51351.1|6291497_6291761_+	hypothetical protein	NA	NA	NA	NA	NA
AYF51352.1|6291856_6292960_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
AYF51353.1|6293531_6294908_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
AYF51354.1|6295322_6296270_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
AYF51355.1|6296339_6297185_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
AYF51356.1|6297181_6298360_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	37.1	5.9e-26
AYF51357.1|6298527_6300519_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	28.7	3.1e-19
AYF51358.1|6300853_6301447_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
AYF51359.1|6301556_6303029_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
AYF51360.1|6303158_6304862_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	30.5	1.3e-50
