assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003627835.1_ASM362783v1	CP032481	Staphylococcus aureus strain O326 chromosome, complete genome	1	1801172-1801255	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GGGCCCCAACACAGAAGCTGGCCAA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|47aa|up_4|CP032481.1_1796254_1796395_-,NA	NA|286aa|up_9|CP032481.1_1792417_1793275_-	PRK13668, PRK13668, hypothetical protein; Provisional	NA|104aa|up_8|CP032481.1_1793374_1793686_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|359aa|up_7|CP032481.1_1793750_1794827_-	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|105aa|up_6|CP032481.1_1794910_1795225_+	COG5584, COG5584, Predicted small secreted protein [Function unknown]	NA|281aa|up_5|CP032481.1_1795349_1796192_-	cd07728, YtnP-like_MBL-fold, Bacillus subtilis YtnP and related proteins; MBL-fold metallo hydrolase domain	NA|47aa|up_4|CP032481.1_1796254_1796395_-	NA	NA|215aa|up_3|CP032481.1_1796661_1797306_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|264aa|up_2|CP032481.1_1797320_1798112_-	COG0510, ycfN, Thiamine kinase and related kinases [Coenzyme transport and metabolism]	NA|283aa|up_1|CP032481.1_1798661_1799510_-	TIGR01121, D-alanine_aminotransferase, D-amino acid aminotransferase	NA|470aa|up_0|CP032481.1_1799513_1800923_-	PRK07318, PRK07318, dipeptidase PepV; Reviewed	NA|141aa|down_0|CP032481.1_1801471_1801894_-	pfam12732, YtxH, YtxH-like protein	NA|232aa|down_1|CP032481.1_1801910_1802606_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|554aa|down_2|CP032481.1_1802602_1804264_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|423aa|down_3|CP032481.1_1804670_1805939_+	pfam03486, HI0933_like, HI0933-like protein	NA|2155aa|down_4|CP032481.1_1806055_1812520_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain	NA|104aa|down_5|CP032481.1_1812846_1813158_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|806aa|down_6|CP032481.1_1813179_1815597_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|394aa|down_7|CP032481.1_1815884_1817066_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|318aa|down_8|CP032481.1_1817175_1818129_+	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only]	NA|188aa|down_9|CP032481.1_1818125_1818689_+	pfam06962, rRNA_methylase, Putative rRNA methylase
GCA_003627835.1_ASM362783v1	CP032481	Staphylococcus aureus strain O326 chromosome, complete genome	2	1915073-1915200	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AATTATGGAGCGGAAGATAGGATTTACACCTATACCTC	38	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|141aa|up_8|CP032481.1_1907172_1907595_-,NA|89aa|up_7|CP032481.1_1907897_1908164_+,NA|51aa|up_6|CP032481.1_1908228_1908381_-,NA	NA|462aa|up_9|CP032481.1_1905591_1906977_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|141aa|up_8|CP032481.1_1907172_1907595_-	NA	NA|89aa|up_7|CP032481.1_1907897_1908164_+	NA	NA|51aa|up_6|CP032481.1_1908228_1908381_-	NA	NA|200aa|up_5|CP032481.1_1908405_1909005_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|up_4|CP032481.1_1909163_1909634_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_3|CP032481.1_1909638_1910766_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|243aa|up_2|CP032481.1_1910916_1911645_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|up_1|CP032481.1_1911631_1913089_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|up_0|CP032481.1_1913346_1914408_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|149aa|down_0|CP032481.1_1923209_1923656_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|309aa|down_1|CP032481.1_1923752_1924679_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family	NA|152aa|down_2|CP032481.1_1924708_1925164_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|430aa|down_3|CP032481.1_1925244_1926534_+	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional	NA|348aa|down_4|CP032481.1_1926877_1927921_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|579aa|down_5|CP032481.1_1928110_1929847_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|181aa|down_6|CP032481.1_1930137_1930680_-	PRK13662, PRK13662, hypothetical protein; Provisional	NA|346aa|down_7|CP032481.1_1930982_1932020_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|326aa|down_8|CP032481.1_1932171_1933149_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|279aa|down_9|CP032481.1_1933409_1934246_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
GCA_003627835.1_ASM362783v1	CP032481	Staphylococcus aureus strain O326 chromosome, complete genome	3	2004948-2005137	1	CRT	no	DEDDh	cas3,DEDDh,DinG,csa3,WYL	Unclear	CCACCCCAACTTGCATTGT	19	1	2	2004967-2005005|2004967-2005005	CP032481.1_1155553-1155515|CP032481.1_2310242-2310280	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|151aa|up_8|CP032481.1_1995953_1996406_-,NA|49aa|down_0|CP032481.1_2005483_2005630_-	NA|329aa|up_9|CP032481.1_1994778_1995765_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|151aa|up_8|CP032481.1_1995953_1996406_-	NA	NA|244aa|up_7|CP032481.1_1996591_1997323_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|up_6|CP032481.1_1997324_1998638_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|up_5|CP032481.1_1998929_1999430_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	DEDDh|185aa|up_4|CP032481.1_1999820_2000375_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|up_3|CP032481.1_2000441_2001512_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|up_2|CP032481.1_2001757_2002288_-	pfam11667, DUF3267, Putative zincin peptidase	NA|454aa|up_1|CP032481.1_2002457_2003819_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|316aa|up_0|CP032481.1_2003899_2004847_-	PRK13337, PRK13337, putative lipid kinase; Reviewed	NA|49aa|down_0|CP032481.1_2005483_2005630_-	NA	NA|476aa|down_1|CP032481.1_2005668_2007096_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|486aa|down_2|CP032481.1_2007108_2008566_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|101aa|down_3|CP032481.1_2008567_2008870_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|513aa|down_4|CP032481.1_2009235_2010774_+	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	NA|118aa|down_5|CP032481.1_2010932_2011286_-	pfam01638, HxlR, HxlR-like helix-turn-helix	NA|320aa|down_6|CP032481.1_2011410_2012370_+	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|400aa|down_7|CP032481.1_2012611_2013811_-	COG4851, CamS, Protein involved in sex pheromone biosynthesis [General function prediction only]	NA|668aa|down_8|CP032481.1_2013823_2015827_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|731aa|down_9|CP032481.1_2015830_2018023_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA
GCA_003627835.1_ASM362783v1	CP032481	Staphylococcus aureus strain O326 chromosome, complete genome	4	2186649-2186737	3	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	TTACAACTTTAGTTGTTAGGGGCTCTTATGCA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|77aa|up_5|CP032481.1_2181524_2181755_-,NA|364aa|up_0|CP032481.1_2185543_2186635_+,NA	NA|237aa|up_9|CP032481.1_2177132_2177843_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|CP032481.1_2177963_2178407_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|CP032481.1_2178606_2179020_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|CP032481.1_2179477_2180851_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|CP032481.1_2181524_2181755_-	NA	NA|339aa|up_4|CP032481.1_2181785_2182802_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|CP032481.1_2183158_2183824_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|CP032481.1_2183975_2184296_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|CP032481.1_2184297_2185278_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|CP032481.1_2185543_2186635_+	NA	NA|286aa|down_0|CP032481.1_2187074_2187932_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_1|CP032481.1_2187999_2188782_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|642aa|down_2|CP032481.1_2189260_2191186_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|602aa|down_3|CP032481.1_2193334_2195140_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_4|CP032481.1_2195820_2197359_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_5|CP032481.1_2197393_2199526_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_6|CP032481.1_2199537_2199972_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_7|CP032481.1_2199971_2201078_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|452aa|down_8|CP032481.1_2209126_2210482_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|311aa|down_9|CP032481.1_2210508_2211441_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]
GCA_003627835.1_ASM362783v1	CP032481	Staphylococcus aureus strain O326 chromosome, complete genome	5	2310287-2310366	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTATGCTG	25	1	1	2310312-2310341	CP032481.1_2310198-2310227	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|55aa|up_7|CP032481.1_2300749_2300914_+,NA|106aa|up_6|CP032481.1_2301148_2301466_+,NA	NA|288aa|up_9|CP032481.1_2298426_2299290_+	COG4975, GlcU, Putative glucose uptake permease [Carbohydrate transport and metabolism]	NA|303aa|up_8|CP032481.1_2299708_2300617_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|55aa|up_7|CP032481.1_2300749_2300914_+	NA	NA|106aa|up_6|CP032481.1_2301148_2301466_+	NA	NA|1056aa|up_5|CP032481.1_2301652_2304820_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_4|CP032481.1_2304936_2306202_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|255aa|up_3|CP032481.1_2306833_2307598_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_2|CP032481.1_2307761_2308202_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_1|CP032481.1_2308194_2309406_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_0|CP032481.1_2309506_2309857_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|341aa|down_0|CP032481.1_2310547_2311570_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|CP032481.1_2311589_2312189_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|CP032481.1_2312195_2312429_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|CP032481.1_2312434_2312881_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|CP032481.1_2312894_2313380_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|CP032481.1_2313376_2314636_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|CP032481.1_2314698_2315193_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|CP032481.1_2315194_2315701_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|CP032481.1_2315731_2316736_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|CP032481.1_2316904_2317510_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
