The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP032831	Klebsiella pneumoniae strain INF078 chromosome, complete genome	5295441	1622144	1629051	5295441		Planktothrix_phage(33.33%)	6	NA	NA
AYK01750.1|1622144_1623008_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.5	9.7e-10
AYJ98384.1|1623018_1623792_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
AYK01751.1|1624034_1624928_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
AYJ98385.1|1625173_1626535_-	U32 family peptidase	NA	Q6DW11	Phage_TP	94.8	1.8e-207
AYJ98386.1|1626853_1627576_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
AYJ98387.1|1627572_1629051_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 2
CP032831	Klebsiella pneumoniae strain INF078 chromosome, complete genome	5295441	1863574	1916364	5295441	tRNA,head,terminase,coat,lysis	Enterobacteria_phage(22.22%)	68	NA	NA
AYJ98576.1|1863574_1865308_-|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L6Z2	Tupanvirus	33.8	1.4e-87
AYJ98577.1|1865543_1866113_+	VOC family protein	NA	NA	NA	NA	NA
AYJ98578.1|1866189_1866933_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
AYJ98579.1|1867014_1868019_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
AYJ98580.1|1868015_1868759_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.0	4.1e-25
AYJ98581.1|1868798_1869194_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ98582.1|1869246_1870020_-	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	82.7	1.1e-60
AYJ98583.1|1870022_1871282_-	DUF3596 domain-containing protein	NA	A0A286S1S8	Klebsiella_phage	89.4	5.2e-222
AYJ98584.1|1871324_1871570_-	excisionase	NA	A0A286S2A4	Klebsiella_phage	92.1	1.4e-35
AYJ98585.1|1871573_1871738_-	TraR/DksA family transcriptional regulator	NA	A0A0K2FI84	Escherichia_phage	56.9	5.3e-10
AYJ98586.1|1871790_1872009_-	hypothetical protein	NA	A0A1I9LJM7	Stx_converting_phage	47.2	2.1e-09
AYJ98587.1|1872005_1874009_-	phage N-6-adenine-methyltransferase	NA	A0A1B0V7P0	Salmonella_phage	47.9	1.4e-123
AYJ98588.1|1874005_1874164_-	DUF1317 family protein	NA	A0A0N7CHV0	Escherichia_phage	58.8	1.9e-09
AYJ98589.1|1874160_1874841_-	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	91.2	4.8e-121
AYJ98590.1|1874837_1875683_-	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	61.2	1.2e-68
AYJ98591.1|1875698_1875983_-	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	79.8	1.1e-39
AYJ98592.1|1876063_1876270_-	cell division inhibitor protein	NA	A0A0M4S6W3	Salmonella_phage	94.1	1.4e-31
AYJ98593.1|1876909_1877557_-	hypothetical protein	NA	A4KWT4	Enterobacteria_phage	63.0	1.7e-19
AYJ98594.1|1877553_1877988_-	hypothetical protein	NA	A4KWT5	Enterobacteria_phage	64.6	4.1e-49
AYJ98595.1|1878065_1878185_-	hypothetical protein	NA	NA	NA	NA	NA
AYK01763.1|1878207_1878930_-	helix-turn-helix transcriptional regulator	NA	E7C9R0	Salmonella_phage	64.1	1.7e-76
AYJ98596.1|1878998_1879226_+	Cro/Cl family transcriptional regulator	NA	A0A2I6PIE5	Escherichia_phage	61.2	5.6e-18
AYJ98597.1|1879265_1879487_+	transcriptional regulator	NA	NA	NA	NA	NA
AYJ98598.1|1879572_1880433_+	replication protein	NA	K7PGT1	Enterobacteria_phage	52.2	2.8e-57
AYJ98599.1|1880429_1881278_+	AAA family ATPase	NA	K7PLU3	Enterobacteria_phage	60.8	4.6e-89
AYJ98600.1|1881274_1881568_+	protein ren	NA	O48423	Enterobacteria_phage	65.6	2.5e-26
AYJ98601.1|1881564_1882110_+	hypothetical protein	NA	R9TME7	Aeromonas_phage	41.1	1.5e-08
AYJ98602.1|1882106_1882589_+	methyltransferase domain-containing protein	NA	H9C170	Pectobacterium_phage	82.2	1.9e-71
AYJ98603.1|1882585_1882792_+	hypothetical protein	NA	R9TRD3	Aeromonas_phage	98.5	2.8e-32
AYJ98604.1|1882788_1883370_+	ead/Ea22-like family protein	NA	A0A1R3Y5V7	Salmonella_virus	59.6	6.7e-07
AYJ98605.1|1883369_1883558_+	diguanylate phosphodiesterase	NA	A0A192Y8X2	Salmonella_phage	90.3	2.8e-23
AYK01764.1|1883649_1884600_+	DUF551 domain-containing protein	NA	R9TQX3	Aeromonas_phage	66.4	3.2e-38
AYJ98606.1|1884599_1884803_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ98607.1|1885055_1885511_+	hypothetical protein	NA	K7P7B8	Enterobacteria_phage	67.5	3.4e-54
AYJ98608.1|1885510_1885678_+	NinE family protein	NA	K7P7K0	Enterobacteria_phage	66.1	5.4e-10
AYJ98609.1|1885674_1886343_+	serine/threonine protein phosphatase	NA	M9P0E4	Enterobacteria_phage	77.9	1.8e-104
AYJ98610.1|1886335_1886974_+	hypothetical protein	NA	H6WRY9	Salmonella_phage	65.6	2.1e-70
AYJ98611.1|1886970_1887111_+	YlcG family protein	NA	NA	NA	NA	NA
AYJ98612.1|1887107_1887797_+	antiterminator	NA	I6PDF8	Cronobacter_phage	53.2	2.0e-58
AYJ98613.1|1888808_1889033_+|lysis	lysis protein	lysis	M9NZI9	Enterobacteria_phage	91.9	4.0e-32
AYJ98614.1|1889010_1889505_+	lysozyme	NA	M9P0E5	Enterobacteria_phage	94.5	8.6e-88
AYJ98615.1|1889605_1890073_+|lysis	lysis protein	lysis	Q76H63	Enterobacteria_phage	71.0	5.3e-55
AYJ98616.1|1890582_1891098_+|terminase	terminase small subunit	terminase	I6PDJ6	Cronobacter_phage	75.3	3.3e-66
AYJ98617.1|1891097_1892570_+|terminase	terminase	terminase	A0A1W6JNY3	Morganella_phage	82.7	1.2e-249
AYJ98618.1|1892582_1894052_+	DUF1073 domain-containing protein	NA	F1C5D7	Cronobacter_phage	56.3	3.4e-148
AYJ98619.1|1893978_1894986_+|head	phage head morphogenesis protein	head	F1C5D8	Cronobacter_phage	69.2	2.6e-115
AYJ98620.1|1895215_1896571_+	DUF2213 domain-containing protein	NA	F1C5D9	Cronobacter_phage	52.6	3.9e-130
AYJ98621.1|1896570_1897032_+	hypothetical protein	NA	B1GS72	Salmonella_phage	50.3	5.0e-29
AYJ98622.1|1897028_1898084_+|coat	phage coat protein	coat	B1GS73	Salmonella_phage	53.4	1.7e-101
AYJ98623.1|1898116_1898365_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ98624.1|1898367_1898748_+	hypothetical protein	NA	F1C5E2	Cronobacter_phage	55.3	5.3e-29
AYJ98625.1|1898747_1898921_+	50S ribosomal protein L13	NA	I6R0P9	Salmonella_phage	54.4	7.1e-13
AYJ98626.1|1898920_1899283_+	hypothetical protein	NA	A0A0M3LSC9	Mannheimia_phage	48.3	9.6e-20
AYJ98627.1|1899285_1899654_+	HK97 gp10 family phage protein	NA	F1C5E3	Cronobacter_phage	82.8	1.3e-48
AYJ98628.1|1899650_1900034_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ98629.1|1900092_1900857_+	hypothetical protein	NA	G0ZNE6	Cronobacter_phage	43.6	5.5e-41
AYJ98630.1|1900916_1901630_+	hypothetical protein	NA	G0ZNE7	Cronobacter_phage	53.7	6.2e-63
AYJ98631.1|1901847_1902603_+	DNA-binding protein	NA	K7PGT4	Enterobacteria_phage	51.0	2.4e-60
AYJ98632.1|1902914_1903493_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ98633.1|1903568_1904597_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ98634.1|1904661_1908078_+	hypothetical protein	NA	R9TMK1	Aeromonas_phage	50.0	4.6e-204
AYJ98635.1|1908118_1908298_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
AYJ98636.1|1908274_1908544_-	DUF1883 domain-containing protein	NA	NA	NA	NA	NA
AYK01765.1|1908727_1909147_+	hypothetical protein	NA	A0A2P1MXB5	Escherichia_phage	46.3	3.5e-29
AYJ98637.1|1909146_1909617_+	hypothetical protein	NA	R9TPR6	Aeromonas_phage	40.4	9.6e-28
AYJ98638.1|1909613_1910009_+	hypothetical protein	NA	F1C5F2	Cronobacter_phage	54.8	1.0e-35
AYJ98639.1|1909995_1912473_+	MoaD/ThiS family protein	NA	R9TR21	Aeromonas_phage	47.0	1.4e-197
AYJ98640.1|1915269_1916364_+	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	87.1	1.4e-178
>prophage 3
CP032831	Klebsiella pneumoniae strain INF078 chromosome, complete genome	5295441	2722803	2729233	5295441		Escherichia_phage(100.0%)	8	NA	NA
AYJ99398.1|2722803_2723892_-	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	99.7	5.2e-210
AYJ99399.1|2723978_2724239_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
AYJ99400.1|2724536_2725397_+	class A broad-spectrum beta-lactamase SHV-1	NA	A0A077SL40	Escherichia_phage	99.7	4.4e-156
AYJ99401.1|2725417_2726179_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AYJ99402.1|2726169_2726403_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99403.1|2726440_2727343_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
AYJ99404.1|2727354_2728620_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.8	7.8e-234
AYJ99405.1|2728612_2729233_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 4
CP032831	Klebsiella pneumoniae strain INF078 chromosome, complete genome	5295441	2995629	3030911	5295441	holin,tail,terminase	Klebsiella_phage(20.0%)	43	NA	NA
AYJ99647.1|2995629_2996298_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	60.8	9.6e-82
AYJ99648.1|2996343_2996772_-	S-(hydroxymethyl)glutathione synthase	NA	NA	NA	NA	NA
AYJ99649.1|2996946_2998212_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	82.9	2.1e-207
AYJ99650.1|2998213_2998633_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
AYJ99651.1|2999182_2999605_-	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	1.6e-26
AYJ99652.1|2999682_2999805_-	hypothetical protein	NA	A0A286S1P7	Klebsiella_phage	74.4	1.7e-08
AYJ99653.1|2999971_3000562_+	sugar transferase	NA	NA	NA	NA	NA
AYJ99654.1|3000562_3001270_+	GlcNAc-PI de-N-acetylase	NA	NA	NA	NA	NA
AYJ99655.1|3002022_3003117_-	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	86.8	2.0e-177
AYJ99656.1|3005799_3008868_-	kinase	NA	A0A286S259	Klebsiella_phage	96.3	0.0e+00
AYJ99657.1|3008864_3009245_-	nitrite transporter	NA	A0A286S2A6	Klebsiella_phage	95.2	3.1e-69
AYJ99658.1|3009254_3009737_-	DUF1833 domain-containing protein	NA	A0A286S2B1	Klebsiella_phage	93.8	2.9e-80
AYJ99659.1|3009917_3010382_-	hypothetical protein	NA	A0A286S298	Klebsiella_phage	67.8	6.7e-58
AYJ99660.1|3010381_3013039_-|tail	phage tail protein	tail	A0A2D1GPC9	Escherichia_phage	34.8	3.6e-87
AYK01818.1|3013112_3013481_-	zinc ribbon domain-containing protein	NA	I6PDJ9	Cronobacter_phage	43.7	6.6e-16
AYJ99661.1|3013591_3013948_-	hypothetical protein	NA	A0A1V0E5P9	Salmonella_phage	75.0	1.1e-44
AYJ99662.1|3014024_3014231_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99663.1|3014368_3014851_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99664.1|3014904_3016077_-	Ig domain-containing protein	NA	A0A0D4DBN5	Acinetobacter_phage	27.0	9.4e-24
AYJ99665.1|3016100_3016493_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
AYJ99666.1|3016489_3017041_-	hypothetical protein	NA	G8C7Q1	Escherichia_phage	40.5	1.2e-29
AYJ99667.1|3017042_3017426_-	glutamate 5-kinase	NA	A0A0S2SYG4	Pseudomonas_phage	45.2	1.6e-20
AYJ99668.1|3017412_3017646_-	hypothetical protein	NA	A0A2H4J0Y9	uncultured_Caudovirales_phage	47.1	5.8e-10
AYJ99669.1|3017655_3017910_-	hypothetical protein	NA	J9Q7U0	Salmonella_phage	52.4	8.0e-21
AYJ99670.1|3017911_3018307_-	protein singed	NA	A0A0S2SYB7	Pseudomonas_phage	43.3	3.3e-13
AYJ99671.1|3018628_3019582_-	Ig domain-containing protein	NA	A0A1B0VMF8	Pseudomonas_phage	74.0	1.1e-131
AYJ99672.1|3019592_3020378_-	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	63.9	6.0e-67
AYJ99673.1|3020462_3021575_-	hypothetical protein	NA	I6PD76	Cronobacter_phage	54.1	2.4e-109
AYJ99674.1|3021558_3022959_-	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	53.5	7.1e-127
AYJ99675.1|3022960_3024274_-|terminase	terminase	terminase	A0A0S2SYF1	Pseudomonas_phage	73.6	2.2e-183
AYJ99676.1|3024257_3025253_-|terminase	terminase small subunit	terminase	Q5QF76	Pseudomonas_virus	43.1	4.2e-33
AYJ99677.1|3025345_3025984_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99678.1|3026117_3026309_-	hypothetical protein	NA	A0A286SGR9	Klebsiella_phage	94.9	1.8e-25
AYJ99679.1|3026259_3026535_-	hypothetical protein	NA	G8C7W1	Escherichia_phage	40.0	2.2e-08
AYJ99680.1|3026537_3027167_-	glycoside hydrolase family 19 protein	NA	G9L6E8	Escherichia_phage	77.5	3.1e-90
AYJ99681.1|3027166_3027448_-|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	73.1	1.3e-32
AYJ99682.1|3027434_3027893_-	hypothetical protein	NA	G8C7V8	Escherichia_phage	73.1	2.2e-45
AYJ99683.1|3027932_3028157_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99684.1|3028516_3029338_-	antitermination protein	NA	K7PKS8	Enterobacteria_phage	67.1	4.0e-98
AYJ99685.1|3029453_3029810_-	RusA family crossover junction endodeoxyribonuclease	NA	K7P6W0	Enterobacteria_phage	64.1	1.5e-41
AYJ99686.1|3029806_3030103_-	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	72.9	1.2e-36
AYJ99687.1|3030105_3030312_-	hypothetical protein	NA	H6WRY8	Salmonella_phage	69.2	1.3e-21
AYJ99688.1|3030311_3030911_-	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	79.4	3.8e-90
>prophage 5
CP032831	Klebsiella pneumoniae strain INF078 chromosome, complete genome	5295441	3034698	3050402	5295441	integrase	Salmonella_phage(38.89%)	22	3033865:3033878	3048521:3048534
3033865:3033878	attL	TGAGCATAATCGCC	NA	NA	NA	NA
AYJ99692.1|3034698_3034953_-	hypothetical protein	NA	S5MQM0	Escherichia_phage	50.7	5.3e-09
AYJ99693.1|3035146_3035932_-	hypothetical protein	NA	C7BGF1	Burkholderia_phage	53.7	1.1e-65
AYJ99694.1|3035924_3036260_-	DUF977 family protein	NA	H6WRX9	Salmonella_phage	43.0	4.4e-11
AYJ99695.1|3036252_3036996_-	Replication protein P	NA	A0A0M3ULE2	Salmonella_phage	55.2	3.1e-65
AYJ99696.1|3036992_3037913_-	hypothetical protein	NA	K7PGZ0	Enterobacteria_phage	61.3	1.7e-92
AYJ99697.1|3038263_3038800_-	hypothetical protein	NA	M9NZI6	Enterobacteria_phage	68.9	6.3e-60
AYJ99698.1|3038802_3039030_-	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	50.0	3.4e-15
AYJ99699.1|3039134_3039569_+	helix-turn-helix domain-containing protein	NA	H6WRX4	Salmonella_phage	39.0	2.3e-15
AYJ99700.1|3039752_3039851_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99701.1|3039957_3040149_+	DUF1482 family protein	NA	NA	NA	NA	NA
AYJ99702.1|3040157_3040313_+	hypothetical protein	NA	K7PGY4	Enterobacteria_phage	71.2	2.0e-14
AYJ99703.1|3040449_3043488_+	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	58.2	1.7e-295
AYJ99704.1|3043500_3044589_+	enterohemolysin	NA	H6WRX0	Salmonella_phage	56.0	4.1e-106
AYJ99705.1|3044623_3044968_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99706.1|3044960_3045572_+	DUF550 domain-containing protein	NA	S4TSR6	Salmonella_phage	76.3	4.1e-39
AYJ99707.1|3045568_3045877_+	hypothetical protein	NA	I6PD68	Cronobacter_phage	55.9	7.1e-24
AYK01820.1|3045884_3046124_+	DUF4060 family protein	NA	M9P0E0	Enterobacteria_phage	70.1	8.0e-23
AYJ99708.1|3046133_3046448_+	hypothetical protein	NA	K7PM28	Enterobacteria_phage	50.8	1.6e-10
AYJ99709.1|3046344_3047532_-|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	52.2	3.2e-120
AYJ99710.1|3047708_3048599_+	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
3048521:3048534	attR	GGCGATTATGCTCA	NA	NA	NA	NA
AYJ99711.1|3048598_3049591_+	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
AYJ99712.1|3049592_3050402_+	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
>prophage 6
CP032831	Klebsiella pneumoniae strain INF078 chromosome, complete genome	5295441	3160833	3250512	5295441	tRNA,holin,head,transposase,capsid,terminase,portal,tail	Klebsiella_phage(50.0%)	95	NA	NA
AYJ99818.1|3160833_3161334_+|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
AYJ99819.1|3161450_3161897_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
AYK01824.1|3161880_3162672_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AYJ99820.1|3162773_3163958_+	MFS transporter	NA	NA	NA	NA	NA
AYJ99821.1|3163989_3164682_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99822.1|3164827_3165337_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
AYJ99823.1|3165323_3165680_+	DUF488 domain-containing protein	NA	NA	NA	NA	NA
AYJ99824.1|3165669_3165909_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
AYJ99825.1|3166209_3167223_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.9e-12
AYJ99826.1|3167280_3167382_+	hypothetical protein	NA	NA	NA	NA	NA
AYK01825.1|3167381_3167456_+	protein YoaJ	NA	NA	NA	NA	NA
AYJ99827.1|3167573_3167699_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99828.1|3167757_3168021_-	DUF2534 family protein	NA	NA	NA	NA	NA
AYJ99829.1|3168151_3168790_-	leucine efflux protein	NA	NA	NA	NA	NA
AYJ99830.1|3168879_3169794_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.9e-72
AYJ99831.1|3170009_3170201_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99832.1|3170455_3171499_-	type II asparaginase	NA	NA	NA	NA	NA
AYJ99833.1|3171801_3173010_+	HD domain-containing protein	NA	NA	NA	NA	NA
AYJ99834.1|3173083_3174868_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
AYJ99835.1|3174874_3175765_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYJ99836.1|3175885_3177394_+	UbiD family decarboxylase	NA	NA	NA	NA	NA
AYJ99837.1|3177704_3178391_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AYJ99838.1|3178788_3178968_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99839.1|3179007_3179640_-	DNA-binding protein	NA	NA	NA	NA	NA
AYJ99840.1|3180206_3180404_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99841.1|3180519_3181530_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AYJ99842.1|3181526_3182933_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AYJ99843.1|3182988_3183876_-	manganese catalase family protein	NA	NA	NA	NA	NA
AYJ99844.1|3183892_3184399_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
AYJ99845.1|3184425_3184920_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
AYJ99846.1|3185010_3185196_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA	NA
AYJ99847.1|3185818_3187012_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
AYJ99848.1|3187124_3187352_+	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
AYJ99849.1|3187378_3187558_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99850.1|3187800_3188124_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AYJ99851.1|3188116_3188509_+	amino acid-binding protein	NA	NA	NA	NA	NA
AYJ99852.1|3188505_3189219_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AYJ99853.1|3189491_3189644_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
AYJ99854.1|3189964_3190288_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99855.1|3190293_3190986_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AYJ99856.1|3191341_3192400_-	diguanylate cyclase AdrA	NA	A0A127AWB9	Bacillus_phage	30.6	1.4e-13
AYJ99857.1|3192822_3194247_-|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	49.5	3.3e-95
AYJ99858.1|3194315_3207020_-	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	47.8	0.0e+00
AYJ99859.1|3207082_3207694_-|tail	tail assembly protein	tail	Q6UAW2	Klebsiella_phage	72.5	5.3e-71
AYJ99860.1|3208091_3208802_-	peptidase P60	NA	Q6UAW4	Klebsiella_phage	89.8	1.4e-136
AYJ99861.1|3208803_3209559_-|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	81.3	1.2e-125
AYJ99862.1|3209555_3209894_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	89.3	8.3e-58
AYJ99863.1|3209893_3213229_-|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	87.1	0.0e+00
AYJ99864.1|3213228_3213441_-	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	88.9	3.7e-32
AYJ99865.1|3213461_3213827_-|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	88.5	2.8e-51
AYJ99866.1|3213884_3214346_-|tail	phage tail protein	tail	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
AYJ99867.1|3214377_3214779_-	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	93.2	1.1e-61
AYJ99868.1|3214775_3215165_-	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	84.5	4.0e-56
AYJ99869.1|3215145_3215484_-|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	91.1	5.6e-54
AYJ99870.1|3215480_3215798_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	1.5e-45
AYJ99871.1|3215778_3216039_-	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	60.5	1.6e-21
AYJ99872.1|3216097_3217384_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	89.3	4.4e-216
AYJ99873.1|3217461_3218382_-	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	88.2	9.6e-149
AYJ99874.1|3218418_3219678_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	89.8	1.8e-222
AYJ99875.1|3219677_3219857_-	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.9	6.8e-11
AYJ99876.1|3219850_3221572_-|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.2	7.2e-190
AYJ99877.1|3221571_3222006_-|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	61.9	9.4e-30
AYJ99878.1|3222254_3222686_-	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.6	1.8e-41
AYJ99879.1|3222682_3223006_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99880.1|3222957_3223320_-	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	83.3	1.2e-57
AYJ99881.1|3223646_3223871_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99882.1|3223909_3224362_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99883.1|3225295_3225646_-	hypothetical protein	NA	R9TPM9	Aeromonas_phage	38.1	7.9e-11
AYJ99884.1|3225642_3226140_-	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	85.2	3.7e-78
AYJ99885.1|3226139_3226355_-|holin	holin	holin	A5LH82	Enterobacteria_phage	87.3	1.0e-29
AYJ99886.1|3228606_3229209_-	hypothetical protein	NA	H9C175	Pectobacterium_phage	68.6	1.1e-76
AYJ99887.1|3230142_3231066_+|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	98.7	9.2e-176
AYJ99888.1|3231322_3231526_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99889.1|3231522_3231915_-	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	8.0e-12
AYJ99890.1|3231955_3232201_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	68.0	3.3e-24
AYJ99891.1|3232241_3232475_-	DNA damage-inducible protein I	NA	A0A0M4REN2	Salmonella_phage	48.7	1.1e-13
AYJ99892.1|3232697_3233558_-	DNA adenine methylase	NA	NA	NA	NA	NA
AYJ99893.1|3233638_3235381_-	AAA family ATPase	NA	NA	NA	NA	NA
AYJ99894.1|3236141_3237137_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99895.1|3237282_3237777_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99896.1|3238069_3238282_-	DUF977 family protein	NA	NA	NA	NA	NA
AYJ99897.1|3238284_3238725_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99898.1|3238738_3239203_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	69.5	7.6e-62
AYJ99899.1|3239195_3240179_-	hypothetical protein	NA	A0A0U2RT81	Escherichia_phage	54.0	9.9e-43
AYJ99900.1|3240230_3240785_-	hypothetical protein	NA	NA	NA	NA	NA
AYJ99901.1|3240787_3241009_-	Cro/Cl family transcriptional regulator	NA	H6WRX5	Salmonella_phage	75.3	1.2e-28
AYK01826.1|3241279_3241534_+	hypothetical protein	NA	H6WRX4	Salmonella_phage	54.8	1.6e-13
AYJ99902.1|3242121_3242340_+	hypothetical protein	NA	NA	NA	NA	NA
AYJ99903.1|3242349_3242544_+	DUF1482 family protein	NA	NA	NA	NA	NA
AYJ99904.1|3243070_3245209_+	exonuclease	NA	S4TNL0	Salmonella_phage	42.3	5.6e-99
AYJ99905.1|3245261_3245507_+	excisionase	NA	NA	NA	NA	NA
AYJ99906.1|3246732_3247983_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
AYJ99907.1|3248223_3248874_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
AYJ99908.1|3248890_3249349_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AYK01827.1|3249405_3250512_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 7
CP032831	Klebsiella pneumoniae strain INF078 chromosome, complete genome	5295441	3487176	3496650	5295441	tRNA,protease	Brazilian_cedratvirus(16.67%)	9	NA	NA
AYK00114.1|3487176_3488898_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
AYK00115.1|3488942_3489644_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AYK00116.1|3489997_3490216_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AYK00117.1|3490346_3492626_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.6	1.6e-165
AYK00118.1|3492656_3492974_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
AYK00119.1|3493299_3493521_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
AYK00120.1|3493475_3493658_-	hypothetical protein	NA	NA	NA	NA	NA
AYK00121.1|3493597_3495538_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
AYK00122.1|3495534_3496650_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 1
CP032832	Klebsiella pneumoniae strain INF078 plasmid pINF078-VP, complete sequence	399913	1687	46783	399913	protease,integrase,transposase	Stx2-converting_phage(33.33%)	44	NA	NA
AYK01919.1|1687_2428_-|integrase	site-specific integrase	integrase	I3WFA4	Macacine_betaherpesvirus	58.6	5.4e-25
AYK01920.1|2548_2746_-	serine/threonine protein kinase	NA	NA	NA	NA	NA
AYK02275.1|3139_3343_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
AYK01921.1|3573_5247_-	DNA repair protein	NA	NA	NA	NA	NA
AYK01922.1|5494_5698_+	hypothetical protein	NA	NA	NA	NA	NA
AYK01923.1|5811_6621_-	hypothetical protein	NA	NA	NA	NA	NA
AYK01924.1|6638_7001_-	hypothetical protein	NA	NA	NA	NA	NA
AYK01925.1|7544_8126_+	hypothetical protein	NA	NA	NA	NA	NA
AYK01926.1|8286_9315_+	hypothetical protein	NA	NA	NA	NA	NA
AYK02276.1|9608_10289_+	hypothetical protein	NA	NA	NA	NA	NA
AYK01927.1|10760_11684_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	97.4	7.3e-173
AYK01928.1|11800_12004_+	hemolysin expression modulator Hha	NA	NA	NA	NA	NA
AYK02277.1|12102_12411_+	hypothetical protein	NA	NA	NA	NA	NA
AYK01929.1|12700_13399_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
AYK01930.1|13691_13925_-	hypothetical protein	NA	NA	NA	NA	NA
AYK02278.1|14337_14847_-	N-acetyltransferase	NA	NA	NA	NA	NA
AYK01931.1|15131_16055_+|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	98.7	9.2e-176
AYK01932.1|16324_17200_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AYK01933.1|17320_18352_+|transposase	IS630-like element ISSpu2 family transposase	transposase	NA	NA	NA	NA
AYK01934.1|18504_18915_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AYK01935.1|19362_19866_+	DUF1543 domain-containing protein	NA	NA	NA	NA	NA
AYK01936.1|20060_20345_+	DUF2623 family protein	NA	NA	NA	NA	NA
AYK01937.1|20319_20829_-	transporter	NA	NA	NA	NA	NA
AYK01938.1|23265_24291_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AYK01939.1|24396_24831_+	S-(hydroxymethyl)glutathione synthase	NA	NA	NA	NA	NA
AYK01940.1|25645_26449_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AYK01941.1|27648_27957_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AYK01942.1|28218_29250_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AYK01943.1|30447_31347_+	DNA-binding protein	NA	NA	NA	NA	NA
AYK01944.1|31356_31566_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYK01945.1|31833_32727_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYK01946.1|32829_33159_+	hypothetical protein	NA	NA	NA	NA	NA
AYK01947.1|33310_33868_-	flavin reductase family protein	NA	NA	NA	NA	NA
AYK01948.1|33926_34784_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AYK01949.1|34819_35587_-	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.0	5.4e-12
AYK01950.1|35621_36365_-	SDR family oxidoreductase	NA	A0A0K0KVL6	Prochlorococcus_phage	27.4	1.9e-06
AYK02279.1|36601_37507_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AYK01951.1|37832_38207_-	hypothetical protein	NA	NA	NA	NA	NA
AYK01952.1|38318_38738_+	transcriptional regulator	NA	NA	NA	NA	NA
AYK01953.1|38792_41984_-	multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.2	5.6e-63
AYK01954.1|41980_43150_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AYK01955.1|44188_44863_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	32.3	1.2e-10
AYK01956.1|44859_45207_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	72.9	1.6e-43
AYK01957.1|45226_46783_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	55.9	4.1e-160
>prophage 2
CP032832	Klebsiella pneumoniae strain INF078 plasmid pINF078-VP, complete sequence	399913	290221	319870	399913	tRNA,holin,transposase	Stx2-converting_phage(33.33%)	24	NA	NA
AYK02172.1|290221_291136_+|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	92.2	5.2e-163
AYK02173.1|291358_292378_-	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	37.1	1.9e-57
AYK02174.1|293500_293929_-	S-(hydroxymethyl)glutathione synthase	NA	NA	NA	NA	NA
AYK02175.1|296377_298597_+	ferric-rhodotorulic acid/ferric-coprogen receptor FhuE	NA	NA	NA	NA	NA
AYK02176.1|298774_300349_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	59.8	6.9e-171
AYK02177.1|300368_300716_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	70.1	8.6e-42
AYK02282.1|300712_301189_-|transposase	transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	40.9	1.1e-18
AYK02178.1|301418_301784_-	hypothetical protein	NA	NA	NA	NA	NA
AYK02179.1|301884_302925_-	CAP-Gly protein	NA	NA	NA	NA	NA
AYK02180.1|303372_303621_-	DUF883 family protein	NA	NA	NA	NA	NA
AYK02181.1|303659_303962_-	hypothetical protein	NA	NA	NA	NA	NA
AYK02182.1|303954_304359_-	hypothetical protein	NA	NA	NA	NA	NA
AYK02183.1|305210_306047_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYK02184.1|306168_306459_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AYK02185.1|306505_306991_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AYK02186.1|308563_308902_+|tRNA	tRNA-binding protein	tRNA	NA	NA	NA	NA
AYK02187.1|309672_310095_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AYK02188.1|310526_311735_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	48.4	8.7e-49
AYK02189.1|312457_312787_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	68.0	3.6e-13
AYK02190.1|313892_314912_-	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	37.1	5.1e-58
AYK02191.1|315729_316152_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AYK02192.1|316547_318020_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AYK02193.1|318096_318741_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AYK02283.1|318955_319870_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	92.2	5.2e-163
