The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP032921	Agrobacterium tumefaciens strain 1D1108 chromosome circular, complete sequence	2799706	577717	587367	2799706	protease,terminase,tail,capsid,portal,head	Arthrobacter_phage(20.0%)	13	NA	NA
AYM10191.1|577717_578977_+|terminase	large terminase phage packaging protein	terminase	A0A0U4IJ26	Arthrobacter_phage	40.8	2.1e-69
AYM10192.1|579107_579215_-	hypothetical protein	NA	NA	NA	NA	NA
AYM10193.1|579427_580066_+	chitinase	NA	R9U4A9	Rhizobium_phage	43.9	2.8e-38
AYM10194.1|580109_580433_+	stress responsive protein	NA	NA	NA	NA	NA
AYM10195.1|580619_581786_+|head,portal	phage head portal protein	head,portal	W8ECU7	Geobacillus_phage	39.0	4.9e-65
AYM10196.1|581973_582294_+	hypothetical protein	NA	NA	NA	NA	NA
AYM10197.1|582335_582926_+|head,protease	phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	43.4	2.0e-27
AYM10198.1|582963_584232_+|capsid	phage phi-C31 major capsid gp36-like protein	capsid	Q3HQT0	Burkholderia_phage	42.9	3.8e-79
AYM10199.1|584344_584914_+	hypothetical protein	NA	NA	NA	NA	NA
AYM10200.1|584917_585253_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AYM10201.1|585249_585645_+	hypothetical protein	NA	NA	NA	NA	NA
AYM10202.1|585652_586852_-	MFS permease	NA	NA	NA	NA	NA
AYM10203.1|586959_587367_+|tail	tail protein	tail	NA	NA	NA	NA
>prophage 2
CP032921	Agrobacterium tumefaciens strain 1D1108 chromosome circular, complete sequence	2799706	1303928	1312077	2799706	tRNA	uncultured_Mediterranean_phage(66.67%)	8	NA	NA
AYM10887.1|1303928_1305461_+	long-chain acyl-CoA synthetase	NA	A0A2K9KZV5	Tupanvirus	22.4	2.0e-21
AYM10888.1|1305444_1306722_+	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
AYM10889.1|1306836_1307994_-	para-aminobenzoate synthase component I	NA	S4VT78	Pandoravirus	44.6	1.4e-43
AYM10890.1|1308030_1309161_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	52.7	4.0e-104
AYM10891.1|1309160_1310243_-|tRNA	S-adenosylmethionine tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AYM10892.1|1310437_1310947_-	peptidyl-prolyl cis-trans isomerase B (cyclophilin B)	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.1e-45
AYM10893.1|1310983_1311553_-	peptidyl-prolyl cis-trans isomerase A (cyclophilin A)	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.2	1.8e-44
AYM10894.1|1311582_1312077_-	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	39.0	2.2e-27
>prophage 3
CP032921	Agrobacterium tumefaciens strain 1D1108 chromosome circular, complete sequence	2799706	1328177	1336558	2799706	tRNA	uncultured_Mediterranean_phage(75.0%)	9	NA	NA
AYM10911.1|1328177_1329650_-	lipoprotein	NA	I3PV24	Clostridium_phage	30.6	1.4e-11
AYM10912.1|1330088_1330742_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	36.0	4.6e-12
AYM10913.1|1330738_1331509_-	stationary-phase survival protein	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	29.9	6.2e-24
AYM10914.1|1331665_1332949_-|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.3	1.7e-98
AYM10915.1|1333053_1333857_-	sec-independent protein translocase protein TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	41.2	8.9e-42
AYM10916.1|1333853_1334582_-	sec-independent protein translocase protein TatB	NA	NA	NA	NA	NA
AYM10917.1|1334636_1334843_-	sec-independent protein translocase protein TatA	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	69.8	2.1e-08
AYM10918.1|1334973_1335753_-	segregation and condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.1	2.4e-39
AYM10919.1|1335709_1336558_-	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.7	2.3e-35
>prophage 1
CP032922	Agrobacterium tumefaciens strain 1D1108 chromosome linear, complete sequence	2106029	855048	903435	2106029		Rhizobium_phage(96.08%)	59	NA	NA
AYM13050.1|855048_855540_-	hypothetical protein	NA	R9TS95	Rhizobium_phage	57.9	1.3e-43
AYM13051.1|855542_855869_-	hypothetical protein	NA	R9TN87	Rhizobium_phage	71.0	2.9e-31
AYM13052.1|855893_856601_-	hypothetical protein	NA	Q8W6M2	Sinorhizobium_phage	73.6	9.5e-72
AYM13053.1|856722_857730_-	hypothetical protein	NA	NA	NA	NA	NA
AYM13054.1|857836_858376_-	hypothetical protein	NA	R9U4D4	Rhizobium_phage	57.2	1.2e-45
AYM13055.1|858372_859434_-	hypothetical protein	NA	R9TQG5	Rhizobium_phage	60.4	3.4e-41
AYM13056.1|859449_860154_-	hypothetical protein	NA	R9TS90	Rhizobium_phage	85.9	9.7e-117
AYM13057.1|860143_861229_-	hypothetical protein	NA	R9TN81	Rhizobium_phage	92.0	6.1e-187
AYM13058.1|861200_861737_-	hypothetical protein	NA	R9TRP7	Rhizobium_phage	89.9	1.7e-89
AYM13059.1|861747_862236_-	hypothetical protein	NA	R9TP58	Rhizobium_phage	86.7	5.7e-76
AYM13060.1|862232_863297_-	hypothetical protein	NA	R9TQG2	Rhizobium_phage	84.5	2.4e-175
AYM13061.1|863296_863920_-	hypothetical protein	NA	R9TS88	Rhizobium_phage	75.8	1.2e-81
AYM13062.1|863919_864378_-	hypothetical protein	NA	R9TN75	Rhizobium_phage	76.3	5.2e-63
AYM13063.1|864454_864973_+	hypothetical protein	NA	R9TRP2	Rhizobium_phage	77.7	5.7e-58
AYM13064.1|864982_866944_-	hypothetical protein	NA	R9TP54	Rhizobium_phage	93.4	0.0e+00
AYM13065.1|866953_867508_-	hypothetical protein	NA	R9TQF7	Rhizobium_phage	96.7	2.8e-95
AYM13066.1|867620_867941_-	hypothetical protein	NA	R9TS84	Rhizobium_phage	77.4	3.8e-44
AYM13067.1|867950_868322_-	hypothetical protein	NA	R9TN68	Rhizobium_phage	78.0	2.9e-48
AYM13068.1|868371_869850_-	hypothetical protein	NA	R9TRN7	Rhizobium_phage	89.6	3.8e-248
AYM13069.1|869854_870037_-	hypothetical protein	NA	R9TP51	Rhizobium_phage	75.0	2.0e-18
AYM13070.1|870049_870781_-	hypothetical protein	NA	R9TQF3	Rhizobium_phage	92.6	3.6e-122
AYM13071.1|870767_871169_-	hypothetical protein	NA	R9TS80	Rhizobium_phage	97.0	2.4e-72
AYM13072.1|871173_871500_-	hypothetical protein	NA	NA	NA	NA	NA
AYM13073.1|871501_872557_-	hypothetical protein	NA	V5Q8G6	Xylella_phage	43.1	3.4e-73
AYM13074.1|872581_872923_-	hypothetical protein	NA	NA	NA	NA	NA
AYM13075.1|872924_873974_-	hypothetical protein	NA	R9TQF0	Rhizobium_phage	71.5	4.3e-121
AYM13076.1|874015_874285_-	hypothetical protein	NA	R9TS76	Rhizobium_phage	80.9	9.6e-33
AYM13077.1|874284_875898_-	hypothetical protein	NA	R9TN54	Rhizobium_phage	85.4	3.3e-269
AYM13078.1|875894_877880_-	hypothetical protein	NA	A0A068CDC0	Rhizobium_phage	73.9	4.7e-302
AYM13079.1|877876_878470_-	hypothetical protein	NA	R9TNC8	Rhizobium_phage	69.4	1.0e-71
AYM13080.1|878836_879613_-	hypothetical protein	NA	R9TRT9	Rhizobium_phage	88.7	9.0e-132
AYM13081.1|880036_881857_-	hypothetical protein	NA	R9TSC7	Rhizobium_phage	97.9	0.0e+00
AYM13082.1|881857_883165_-	hypothetical protein	NA	R9TNC4	Rhizobium_phage	94.1	2.0e-232
AYM13083.1|883174_884386_-	hypothetical protein	NA	R9TRT5	Rhizobium_phage	97.0	1.1e-232
AYM13084.1|884382_886608_-	hypothetical protein	NA	R9TP91	Rhizobium_phage	92.1	0.0e+00
AYM13085.1|886929_887508_-	hypothetical protein	NA	R9TSC3	Rhizobium_phage	93.2	1.0e-100
AYM13086.1|887504_887855_-	hypothetical protein	NA	R9TNB9	Rhizobium_phage	94.8	6.0e-59
AYM13087.1|887851_890461_-	hypothetical protein	NA	R9TRS8	Rhizobium_phage	97.0	0.0e+00
AYM13088.1|890460_890646_-	hypothetical protein	NA	NA	NA	NA	NA
AYM13089.1|890642_891092_-	hypothetical protein	NA	R9TP86	Rhizobium_phage	74.5	5.9e-59
AYM13090.1|891088_891589_-	hypothetical protein	NA	R9TQJ7	Rhizobium_phage	95.8	6.1e-81
AYM13091.1|891734_892031_+	hypothetical protein	NA	R9TSB9	Rhizobium_phage	96.9	4.9e-46
AYM13092.1|892303_892606_-	hypothetical protein	NA	NA	NA	NA	NA
AYM13093.1|892635_893337_+	hypothetical protein	NA	NA	NA	NA	NA
AYM13094.1|893321_893588_-	hypothetical protein	NA	NA	NA	NA	NA
AYM13095.1|893898_894093_+	hypothetical protein	NA	R9TP82	Rhizobium_phage	85.9	9.4e-22
AYM13096.1|894160_894346_+	hypothetical protein	NA	NA	NA	NA	NA
AYM13097.1|894345_895053_+	hypothetical protein	NA	R9TQJ1	Rhizobium_phage	99.6	5.9e-130
AYM13098.1|895049_895340_+	hypothetical protein	NA	R9TSB4	Rhizobium_phage	96.9	9.6e-47
AYM13099.1|895332_896490_+	hypothetical protein	NA	R9TNA8	Rhizobium_phage	55.0	1.4e-107
AYM13100.1|896489_896981_+	hypothetical protein	NA	R9TP78	Rhizobium_phage	93.3	4.9e-83
AYM13101.1|897016_897373_+	hypothetical protein	NA	R9TQI8	Rhizobium_phage	99.2	1.4e-60
AYM13102.1|897397_898327_+	hypothetical protein	NA	R9TSA8	Rhizobium_phage	92.8	2.1e-164
AYM13103.1|898341_898851_+	hypothetical protein	NA	R9TNA3	Rhizobium_phage	67.5	2.1e-60
AYM13104.1|898853_899966_+	hypothetical protein	NA	R9TRR6	Rhizobium_phage	97.6	1.9e-199
AYM13105.1|899976_900204_+	hypothetical protein	NA	R9TP74	Rhizobium_phage	92.0	5.8e-31
AYM13106.1|900190_901159_+	hypothetical protein	NA	R9TQI2	Rhizobium_phage	83.7	2.3e-84
AYM13107.1|901162_901675_+	hypothetical protein	NA	R9TRR2	Rhizobium_phage	85.9	3.6e-81
AYM13108.1|901821_903435_+	site-specific recombinase, DNA invertase Pin	NA	R9TP69	Rhizobium_phage	87.8	9.5e-269
>prophage 1
CP032924	Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108b, complete sequence	183311	78867	87890	183311	transposase	Oenococcus_phage(50.0%)	8	NA	NA
AYM14724.1|78867_80076_+	hypothetical protein	NA	Q6A202	Oenococcus_phage	29.4	6.2e-39
AYM14725.1|80085_80853_+	hypothetical protein	NA	A0A0N9R355	Chrysochromulina_ericina_virus	28.7	2.7e-19
AYM14726.1|80897_81929_+	hypothetical protein	NA	NA	NA	NA	NA
AYM14727.1|81943_82714_+	hypothetical protein	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.2	2.4e-12
AYM14728.1|82762_83911_+	hypothetical protein	NA	Q6A202	Oenococcus_phage	35.8	6.1e-60
AYM14729.1|84142_84934_-	hypothetical protein	NA	A0A0P0I4A4	Acinetobacter_phage	42.5	5.1e-50
AYM14730.1|85182_86523_+|transposase	transposase	transposase	NA	NA	NA	NA
AYM14731.1|86735_87890_+	hypothetical protein	NA	Q6A202	Oenococcus_phage	31.6	9.2e-32
