assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	1	1000642-1001097	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	7,7,7	7	Orphan	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA|47aa|up_1|CP033250.1_999351_999492_-,NA	NA|434aa|up_9|CP033250.1_990044_991346_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|CP033250.1_991397_993632_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|CP033250.1_993709_993958_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|CP033250.1_993957_994293_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|CP033250.1_994363_995155_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|CP033250.1_995382_997020_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|CP033250.1_997107_998406_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|CP033250.1_998465_999338_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|CP033250.1_999351_999492_-	NA	NA|224aa|up_0|CP033250.1_999630_1000302_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|CP033250.1_1001735_1003214_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|CP033250.1_1003240_1004518_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|CP033250.1_1004836_1005622_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|CP033250.1_1005691_1007146_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|CP033250.1_1007239_1008577_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|CP033250.1_1008554_1009334_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|CP033250.1_1009330_1010191_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|CP033250.1_1010338_1010914_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|CP033250.1_1010930_1011191_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|CP033250.1_1011181_1012453_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	2	1019329-1020150	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	12,12,13	13	TypeI-E	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA,NA	NA|287aa|up_9|CP033250.1_1009330_1010191_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|up_8|CP033250.1_1010338_1010914_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|up_7|CP033250.1_1010930_1011191_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|up_6|CP033250.1_1011181_1012453_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|up_5|CP033250.1_1012530_1012896_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_4|CP033250.1_1013211_1015011_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_3|CP033250.1_1015010_1016723_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_2|CP033250.1_1016796_1017531_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_1|CP033250.1_1017795_1017948_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_0|CP033250.1_1018140_1019253_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|512aa|down_0|CP033250.1_1020172_1021708_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|116aa|down_1|CP033250.1_1021757_1022105_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|128aa|down_2|CP033250.1_1022101_1022485_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas2|98aa|down_3|CP033250.1_1022874_1023168_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_4|CP033250.1_1023164_1024088_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_5|CP033250.1_1024084_1024735_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_6|CP033250.1_1024716_1025463_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_7|CP033250.1_1025473_1026529_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_8|CP033250.1_1026540_1027077_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_9|CP033250.1_1027073_1028636_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	3	1022568-1022778	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Type I-E	GGTTTATCCCCGCTGGCGCGGGGAACAC,GGTTTATCCCCGCTGGCGCGGGGAACAC,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	3,3,3	3	TypeI-E	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA,NA	NA|424aa|up_9|CP033250.1_1011181_1012453_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|up_8|CP033250.1_1012530_1012896_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_7|CP033250.1_1013211_1015011_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_6|CP033250.1_1015010_1016723_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_5|CP033250.1_1016796_1017531_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_4|CP033250.1_1017795_1017948_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_3|CP033250.1_1018140_1019253_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|512aa|up_2|CP033250.1_1020172_1021708_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|116aa|up_1|CP033250.1_1021757_1022105_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|128aa|up_0|CP033250.1_1022101_1022485_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas2|98aa|down_0|CP033250.1_1022874_1023168_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|CP033250.1_1023164_1024088_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|CP033250.1_1024084_1024735_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|CP033250.1_1024716_1025463_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|CP033250.1_1025473_1026529_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|CP033250.1_1026540_1027077_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_6|CP033250.1_1027073_1028636_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|CP033250.1_1028733_1031433_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|371aa|down_8|CP033250.1_1031671_1032784_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|346aa|down_9|CP033250.1_1033271_1034309_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	4	1032978-1033190	4,4,4	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCGG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCGG	30,29,30	0	0	NA	NA	I-E:I-E:I-E	3,3,3	3	TypeI-E	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA,NA	NA|128aa|up_9|CP033250.1_1022101_1022485_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas2|98aa|up_8|CP033250.1_1022874_1023168_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|up_7|CP033250.1_1023164_1024088_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|up_6|CP033250.1_1024084_1024735_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|up_5|CP033250.1_1024716_1025463_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|up_4|CP033250.1_1025473_1026529_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|up_3|CP033250.1_1026540_1027077_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|up_2|CP033250.1_1027073_1028636_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|up_1|CP033250.1_1028733_1031433_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|371aa|up_0|CP033250.1_1031671_1032784_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|346aa|down_0|CP033250.1_1033271_1034309_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP033250.1_1034560_1035469_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|CP033250.1_1035470_1036898_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP033250.1_1036897_1037503_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|CP033250.1_1037552_1037876_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP033250.1_1038069_1038381_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|CP033250.1_1038399_1039110_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP033250.1_1039109_1039589_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP033250.1_1039585_1040635_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP033250.1_1040615_1041377_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	5	1528709-1528826	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA,NA	NA|300aa|up_9|CP033250.1_1518192_1519092_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_8|CP033250.1_1519284_1520475_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_7|CP033250.1_1520471_1521731_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_6|CP033250.1_1521720_1523349_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_5|CP033250.1_1523621_1524980_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_4|CP033250.1_1524984_1526061_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|69aa|up_3|CP033250.1_1526102_1526309_-	PRK09729, PRK09729, hypothetical protein; Provisional	NA|217aa|up_2|CP033250.1_1526523_1527174_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|CP033250.1_1527227_1527482_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|CP033250.1_1527481_1528612_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|CP033250.1_1528845_1531131_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|CP033250.1_1531826_1535579_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|CP033250.1_1535706_1536429_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|CP033250.1_1536575_1539203_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|CP033250.1_1539351_1541040_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|CP033250.1_1541036_1541660_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1535aa|down_6|CP033250.1_1541593_1546198_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|CP033250.1_1546198_1547848_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|CP033250.1_1547852_1548629_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|CP033250.1_1548702_1549887_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	6	3245382-3245526	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA|97aa|up_5|CP033250.1_3239998_3240289_-,NA	NA|128aa|up_9|CP033250.1_3238443_3238827_-	PHA01519, PHA01519, hypothetical protein	NA|59aa|up_8|CP033250.1_3238787_3238964_-	pfam05322, NinE, NINE Protein	NA|176aa|up_7|CP033250.1_3238960_3239488_-	TIGR01712, DNA_N-6-adenine-methyltransferase_M	NA|153aa|up_6|CP033250.1_3239484_3239943_-	pfam05772, NinB, NinB protein	NA|97aa|up_5|CP033250.1_3239998_3240289_-	NA	NA|234aa|up_4|CP033250.1_3240285_3240987_-	pfam06992, Phage_lambda_P, Replication protein P	NA|300aa|up_3|CP033250.1_3240983_3241883_-	TIGR01610, Replication_protein_15, phage replication protein O, N-terminal domain	NA|99aa|up_2|CP033250.1_3241915_3242212_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|231aa|up_1|CP033250.1_3243205_3243898_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|CP033250.1_3244032_3245316_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|CP033250.1_3245549_3247811_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|CP033250.1_3247993_3249427_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|CP033250.1_3249502_3250555_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|CP033250.1_3250738_3251692_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|CP033250.1_3251732_3252728_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|CP033250.1_3252882_3253701_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|CP033250.1_3253701_3254760_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|CP033250.1_3254762_3255452_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|CP033250.1_3255451_3256225_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|CP033250.1_3256391_3256541_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	7	3484492-3484588	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA,NA	NA|425aa|up_9|CP033250.1_3475442_3476716_-	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed	NA|181aa|up_8|CP033250.1_3477190_3477733_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|CP033250.1_3478212_3479079_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|CP033250.1_3479080_3479293_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|CP033250.1_3479400_3479922_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|CP033250.1_3479957_3481343_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|CP033250.1_3481516_3482011_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|CP033250.1_3482013_3482736_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|CP033250.1_3482853_3483363_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|CP033250.1_3483359_3484427_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|CP033250.1_3484621_3485515_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|CP033250.1_3485511_3486327_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|CP033250.1_3486337_3487597_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|CP033250.1_3487606_3489274_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|CP033250.1_3489590_3490640_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|CP033250.1_3490661_3491897_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|CP033250.1_3491907_3492693_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|CP033250.1_3492920_3494066_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|CP033250.1_3494087_3495389_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|CP033250.1_3495445_3496807_-	PRK08044, PRK08044, allantoinase AllB
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	8	4021275-4021408	5	PILER-CR	no		cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	ATCACCAATATTGAAAAT	18	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA,NA	NA|126aa|up_9|CP033250.1_4011980_4012358_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|281aa|up_8|CP033250.1_4012364_4013207_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|up_7|CP033250.1_4013284_4013764_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|CP033250.1_4013955_4015818_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|CP033250.1_4015810_4016341_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|CP033250.1_4016448_4017780_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|CP033250.1_4017836_4018124_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|CP033250.1_4018120_4019407_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|CP033250.1_4019457_4020399_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|CP033250.1_4020413_4021184_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|CP033250.1_4021656_4023171_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|CP033250.1_4023201_4024344_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|CP033250.1_4024472_4025690_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|CP033250.1_4025763_4027317_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|CP033250.1_4027425_4028211_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|CP033250.1_4028216_4028807_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|CP033250.1_4029015_4029411_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|CP033250.1_4029672_4032894_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|CP033250.1_4032911_4034060_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|CP033250.1_4034515_4035337_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	9	4028845-4028986	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA,NA	NA|96aa|up_9|CP033250.1_4017836_4018124_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|CP033250.1_4018120_4019407_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|CP033250.1_4019457_4020399_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|CP033250.1_4020413_4021184_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|CP033250.1_4021656_4023171_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|CP033250.1_4023201_4024344_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|CP033250.1_4024472_4025690_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|CP033250.1_4025763_4027317_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|CP033250.1_4027425_4028211_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|CP033250.1_4028216_4028807_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|CP033250.1_4029015_4029411_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|CP033250.1_4029672_4032894_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|CP033250.1_4032911_4034060_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|CP033250.1_4034515_4035337_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|CP033250.1_4035503_4036418_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|CP033250.1_4036483_4037434_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|CP033250.1_4037435_4037885_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|CP033250.1_4038009_4038504_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|CP033250.1_4038503_4041320_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|CP033250.1_4041362_4042304_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCA_003703795.1_ASM370379v1	CP033250	Escherichia coli strain ECCHD184 chromosome, complete genome	10	4195581-4195730	9	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG,WYL,RT	NA,NA|532aa|down_6|CP033250.1_4202827_4204423_-	NA|41aa|up_9|CP033250.1_4181804_4181927_-	COG3183, COG3183, Predicted restriction endonuclease [Defense mechanisms]	NA|291aa|up_8|CP033250.1_4182008_4182881_+	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms]	NA|258aa|up_7|CP033250.1_4184758_4185532_+	pfam11459, AbiEi_3, Transcriptional regulator, AbiEi antitoxin, Type IV TA system	NA|306aa|up_6|CP033250.1_4185524_4186442_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|237aa|up_5|CP033250.1_4187622_4188333_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|CP033250.1_4188813_4189833_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|CP033250.1_4189962_4191465_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|CP033250.1_4191583_4192666_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|CP033250.1_4192665_4193766_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|CP033250.1_4194032_4195544_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|CP033250.1_4195897_4196341_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|CP033250.1_4196340_4199196_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|CP033250.1_4199251_4200448_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|CP033250.1_4200640_4201144_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|CP033250.1_4201189_4201606_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|CP033250.1_4201767_4202772_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|532aa|down_6|CP033250.1_4202827_4204423_-	NA	NA|151aa|down_7|CP033250.1_4204545_4204998_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|CP033250.1_4205142_4205736_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_9|CP033250.1_4205806_4206520_+	PRK12742, PRK12742, SDR family oxidoreductase
