assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003704305.1_ASM370430v1	CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	1	1438-1616	1	PILER-CR	no		csa3	Orphan	TACTGATTACAGTGAACGTTCT	22	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG,csa3	NA|310aa|up_0|CP031650.1_0_930_+,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|310aa|up_0|CP031650.1_0_930_+	NA	NA|400aa|down_0|CP031650.1_2737_3937_+	pfam18607, HTH_54, ParA helix turn helix domain	NA|324aa|down_1|CP031650.1_3944_4916_+	pfam08775, ParB, ParB family	NA|337aa|down_2|CP031650.1_6064_7075_-	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|281aa|down_3|CP031650.1_7076_7919_-	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	NA|433aa|down_4|CP031650.1_7931_9230_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|250aa|down_5|CP031650.1_9284_10034_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|301aa|down_6|CP031650.1_10231_11134_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|484aa|down_7|CP031650.1_11333_12785_+	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|187aa|down_8|CP031650.1_13130_13691_+	PRK11045, pagP, lipid IV(A) palmitoyltransferase PagP	NA|500aa|down_9|CP031650.1_13709_15209_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]
GCA_003704305.1_ASM370430v1	CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	2	1820-1932	1	CRISPRCasFinder	no		csa3	Orphan	CTGATGCAGAACAGAATCGCCTCTGTCTACTTACTGCTA	39	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3	NA|310aa|up_0|CP031650.1_0_930_+,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|310aa|up_0|CP031650.1_0_930_+	NA	NA|400aa|down_0|CP031650.1_2737_3937_+	pfam18607, HTH_54, ParA helix turn helix domain	NA|324aa|down_1|CP031650.1_3944_4916_+	pfam08775, ParB, ParB family	NA|337aa|down_2|CP031650.1_6064_7075_-	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|281aa|down_3|CP031650.1_7076_7919_-	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	NA|433aa|down_4|CP031650.1_7931_9230_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|250aa|down_5|CP031650.1_9284_10034_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|301aa|down_6|CP031650.1_10231_11134_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|484aa|down_7|CP031650.1_11333_12785_+	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|187aa|down_8|CP031650.1_13130_13691_+	PRK11045, pagP, lipid IV(A) palmitoyltransferase PagP	NA|500aa|down_9|CP031650.1_13709_15209_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]
GCA_003704305.1_ASM370430v1	CP031649	Pantoea agglomerans strain TH81 chromosome, complete genome	1	1623736-1623827	1	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	AGGCGCATCAATGAAACTCTCTT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3	NA,NA	NA|210aa|up_9|CP031649.1_1615440_1616070_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|133aa|up_8|CP031649.1_1616325_1616724_+	cd07244, FosA, fosfomycin resistant protein subfamily FosA	NA|238aa|up_7|CP031649.1_1616963_1617677_+	PRK10079, PRK10079, phosphonate metabolism transcriptional regulator PhnF; Provisional	NA|149aa|up_6|CP031649.1_1617676_1618123_+	pfam06754, PhnG, Phosphonate metabolism protein PhnG	NA|192aa|up_5|CP031649.1_1618122_1618698_+	PRK10147, phnH, phosphonate C-P lyase system protein PhnH	NA|359aa|up_4|CP031649.1_1618697_1619774_+	pfam05861, PhnI, Bacterial phosphonate metabolism protein (PhnI)	NA|283aa|up_3|CP031649.1_1619766_1620615_+	COG3627, PhnJ, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism]	NA|254aa|up_2|CP031649.1_1620604_1621366_+	PRK11701, phnK, phosphonate C-P lyase system protein PhnK; Provisional	NA|238aa|up_1|CP031649.1_1621366_1622080_+	COG4778, PhnL, ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|379aa|up_0|CP031649.1_1622076_1623213_+	PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional	NA|277aa|down_0|CP031649.1_1624663_1625494_+	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|309aa|down_1|CP031649.1_1625520_1626447_+	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein	NA|287aa|down_2|CP031649.1_1626540_1627401_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|295aa|down_3|CP031649.1_1627397_1628282_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|872aa|down_4|CP031649.1_1628235_1630851_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|505aa|down_5|CP031649.1_1630998_1632513_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|327aa|down_6|CP031649.1_1632523_1633504_+	COG4158, COG4158, Predicted ABC-type sugar transport system, permease component [General function prediction only]	NA|313aa|down_7|CP031649.1_1633594_1634533_+	cd06321, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|228aa|down_8|CP031649.1_1634778_1635462_+	pfam07385, Lyx_isomer, D-lyxose isomerase	NA|248aa|down_9|CP031649.1_1635477_1636221_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCA_003704305.1_ASM370430v1	CP031649	Pantoea agglomerans strain TH81 chromosome, complete genome	2	1725043-1725187	2	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	AGAGATAACAGCGGGTGGGTTGAATAACATTCGGTCTGCTGAGC	44	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3	NA|412aa|up_8|CP031649.1_1715467_1716703_+,NA	NA|437aa|up_9|CP031649.1_1714030_1715341_+	PRK06819, PRK06819, FliC/FljB family flagellin	NA|412aa|up_8|CP031649.1_1715467_1716703_+	NA	NA|323aa|up_7|CP031649.1_1717008_1717977_+	pfam13391, HNH_2, HNH endonuclease	NA|241aa|up_6|CP031649.1_1718121_1718844_+	PRK06986, fliA, flagellar biosynthesis sigma factor; Validated	NA|168aa|up_5|CP031649.1_1718894_1719398_+	PRK11582, PRK11582, flagella biosynthesis regulatory protein FliZ	NA|329aa|up_4|CP031649.1_1719616_1720603_+	PRK03910, PRK03910, D-cysteine desulfhydrase; Validated	NA|267aa|up_3|CP031649.1_1720716_1721517_+	PRK11260, PRK11260, cystine ABC transporter substrate-binding protein	NA|223aa|up_2|CP031649.1_1721516_1722185_+	PRK15100, PRK15100, cystine ABC transporter permease	NA|251aa|up_1|CP031649.1_1722181_1722934_+	PRK11264, PRK11264, putative amino-acid ABC transporter ATP-binding protein YecC; Provisional	NA|362aa|up_0|CP031649.1_1723398_1724484_+	COG4763, COG4763, Predicted membrane protein [Function unknown]	NA|1316aa|down_0|CP031649.1_1725592_1729540_-	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|495aa|down_1|CP031649.1_1729991_1731476_+	PRK15419, PRK15419, sodium/proline symporter PutP	NA|275aa|down_2|CP031649.1_1731665_1732490_+	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|372aa|down_3|CP031649.1_1732542_1733658_+	PRK10378, PRK10378, inactive ferrous ion transporter periplasmic protein EfeO; Provisional	NA|426aa|down_4|CP031649.1_1733660_1734938_+	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|263aa|down_5|CP031649.1_1735509_1736298_+	PRK10536, PRK10536, phosphate starvation-inducible protein PhoH	NA|178aa|down_6|CP031649.1_1736821_1737355_-	pfam01625, PMSR, Peptide methionine sulfoxide reductase	NA|185aa|down_7|CP031649.1_1737414_1737969_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|353aa|down_8|CP031649.1_1738291_1739350_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|227aa|down_9|CP031649.1_1739346_1740027_-	PRK10643, PRK10643, two-component system response regulator PmrA
