assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003716855.1_ASM371685v1	CP032521	Alcaligenes faecalis strain J481 chromosome, complete genome	1	1655910-1656054	1	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Orphan	TCTAAGTCTCTAAGTCTCTAAGTCTCTAAGTCT	33	1	1	1655999-1656021	CP032521.1_1656039-1656061	NA	2	2	Orphan	DEDDh,csa3,DinG,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|251aa|up_7|CP032521.1_1641751_1642504_-,NA|193aa|up_3|CP032521.1_1645859_1646438_+,NA|115aa|up_1|CP032521.1_1647669_1648014_+,NA|97aa|up_0|CP032521.1_1654427_1654718_+,NA	NA|320aa|up_9|CP032521.1_1639515_1640475_-	PRK07048, PRK07048, threo-3-hydroxy-L-aspartate ammonia-lyase	NA|357aa|up_8|CP032521.1_1640676_1641747_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|251aa|up_7|CP032521.1_1641751_1642504_-	NA	NA|353aa|up_6|CP032521.1_1642639_1643698_-	PRK05451, PRK05451, dihydroorotase; Provisional	NA|93aa|up_5|CP032521.1_1644017_1644296_+	cd10567, SWIB-MDM2_like, SWIB/MDM2 domain found in SWIB/MDM2 homologous proteins	NA|480aa|up_4|CP032521.1_1644401_1645841_+	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]	NA|193aa|up_3|CP032521.1_1645859_1646438_+	NA	NA|122aa|up_2|CP032521.1_1646820_1647186_-	COG3671, COG3671, Predicted membrane protein [Function unknown]	NA|115aa|up_1|CP032521.1_1647669_1648014_+	NA	NA|97aa|up_0|CP032521.1_1654427_1654718_+	NA	NA|322aa|down_0|CP032521.1_1656402_1657368_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|369aa|down_1|CP032521.1_1657379_1658486_+	pfam04143, Sulf_transp, Sulphur transport	NA|327aa|down_2|CP032521.1_1658691_1659672_+	COG3366, COG3366, Uncharacterized protein conserved in archaea [Function unknown]	NA|177aa|down_3|CP032521.1_1659668_1660199_-	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase	NA|266aa|down_4|CP032521.1_1660526_1661324_+	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|104aa|down_5|CP032521.1_1661616_1661928_-	pfam05164, ZapA, Cell division protein ZapA	NA|135aa|down_6|CP032521.1_1661931_1662336_-	pfam14362, DUF4407, Domain of unknown function (DUF4407)	NA|153aa|down_7|CP032521.1_1662676_1663135_+	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|502aa|down_8|CP032521.1_1663151_1664657_+	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|345aa|down_9|CP032521.1_1664845_1665880_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
GCA_003716855.1_ASM371685v1	CP032521	Alcaligenes faecalis strain J481 chromosome, complete genome	3	3470740-3471546	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	DEDDh,csa3,DinG,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTTGCTGCCGAGTAGGCAGCTTAGAAA,GTTTGCTGCCGAGTAGGCAGCTTAGAAA,GTTTGCTGCCGAGTAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	10,13,12	13	TypeI-F	DEDDh,csa3,DinG,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA,NA|153aa|down_1|CP032521.1_3472840_3473299_-	NA|209aa|up_9|CP032521.1_3461309_3461936_+	PRK11630, PRK11630, threonylcarbamoyl-AMP synthase	NA|217aa|up_8|CP032521.1_3462089_3462740_+	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|302aa|up_7|CP032521.1_3462819_3463725_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|378aa|up_6|CP032521.1_3463721_3464855_+	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane]	NA|107aa|up_5|CP032521.1_3465285_3465606_+	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1	NA|142aa|up_4|CP032521.1_3465568_3465994_+	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|231aa|up_3|CP032521.1_3466001_3466694_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|447aa|up_2|CP032521.1_3466690_3468031_-	PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional	NA|389aa|up_1|CP032521.1_3468037_3469204_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|399aa|up_0|CP032521.1_3469200_3470397_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|415aa|down_0|CP032521.1_3471681_3472926_-	pfam03594, BenE, Benzoate membrane transport protein	NA|153aa|down_1|CP032521.1_3472840_3473299_-	NA	NA|397aa|down_2|CP032521.1_3473404_3474595_-	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|879aa|down_3|CP032521.1_3474989_3477626_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|371aa|down_4|CP032521.1_3477844_3478957_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|732aa|down_5|CP032521.1_3478969_3481165_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	cas1|327aa|down_6|CP032521.1_3481442_3482423_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1138aa|down_7|CP032521.1_3482433_3485847_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|430aa|down_8|CP032521.1_3486002_3487292_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|341aa|down_9|CP032521.1_3487288_3488311_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)
GCA_003716855.1_ASM371685v1	CP032521	Alcaligenes faecalis strain J481 chromosome, complete genome	4	3490183-3490693	4,2,2	CRISPRCasFinder,PILER-CR,CRT	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	DEDDh,csa3,DinG,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-F	CGGTTCGCTGCCGCATAGGCAGCTTAGAAA,GTTCGCTGCCGCATAGGCAGCTTAGAAA,GTTCGCTGCCGCATAGGCAGCTTAGAAA	30,28,28	0	0	NA	NA	I-F:I-F:I-F	8,8,8	8	TypeI-F	DEDDh,csa3,DinG,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|397aa|up_9|CP032521.1_3473404_3474595_-	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|879aa|up_8|CP032521.1_3474989_3477626_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|371aa|up_7|CP032521.1_3477844_3478957_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|732aa|up_6|CP032521.1_3478969_3481165_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	cas1|327aa|up_5|CP032521.1_3481442_3482423_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1138aa|up_4|CP032521.1_3482433_3485847_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|430aa|up_3|CP032521.1_3486002_3487292_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|341aa|up_2|CP032521.1_3487288_3488311_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|340aa|up_1|CP032521.1_3488464_3489484_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|189aa|up_0|CP032521.1_3489488_3490055_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|393aa|down_0|CP032521.1_3491070_3492249_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|653aa|down_1|CP032521.1_3492242_3494201_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|467aa|down_2|CP032521.1_3494233_3495634_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|255aa|down_3|CP032521.1_3495586_3496351_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|615aa|down_4|CP032521.1_3496482_3498327_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|536aa|down_5|CP032521.1_3498655_3500263_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|344aa|down_6|CP032521.1_3500259_3501291_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|309aa|down_7|CP032521.1_3501366_3502293_-	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|333aa|down_8|CP032521.1_3502289_3503288_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|204aa|down_9|CP032521.1_3503376_3503988_+	pfam13649, Methyltransf_25, Methyltransferase domain
