assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003716935.1_ASM371693v1	CP024738	Akkermansia muciniphila strain AMDK-3 chromosome, complete genome	1	1029898-1030135	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,cas3,cas9,cas1,cas2,DinG,csa3	Orphan	GTCGCACTCCGCAAGGAGTGCGTGGATTGAAA,AAGGAGTGCGTGGATTGAAAC,GTCGCACTCCGCAAGGAGTGCGTGGATTGAAAC	32,21,33	0	0	NA	NA	NA:NA:NA	3,3,2	3	Orphan	DEDDh,cas3,cas9,cas1,cas2,DinG,csa3	NA|60aa|up_7|CP024738.1_1019376_1019556_-,NA|90aa|up_5|CP024738.1_1022307_1022577_-,NA|332aa|up_3|CP024738.1_1023146_1024142_+,NA|82aa|up_1|CP024738.1_1028102_1028348_-,NA|86aa|down_0|CP024738.1_1030200_1030458_-,NA|72aa|down_3|CP024738.1_1031734_1031950_+,NA|94aa|down_6|CP024738.1_1033588_1033870_+,NA|294aa|down_7|CP024738.1_1033862_1034744_+	NA|192aa|up_9|CP024738.1_1016092_1016668_+	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain	NA|900aa|up_8|CP024738.1_1016710_1019410_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|60aa|up_7|CP024738.1_1019376_1019556_-	NA	NA|756aa|up_6|CP024738.1_1019917_1022185_-	PRK11249, katE, hydroperoxidase II; Provisional	NA|90aa|up_5|CP024738.1_1022307_1022577_-	NA	NA|150aa|up_4|CP024738.1_1022697_1023147_+	COG1847, Jag, Predicted RNA-binding protein [General function prediction only]	NA|332aa|up_3|CP024738.1_1023146_1024142_+	NA	NA|1194aa|up_2|CP024738.1_1024300_1027882_+	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA	NA|82aa|up_1|CP024738.1_1028102_1028348_-	NA	NA|385aa|up_0|CP024738.1_1028346_1029501_+	pfam01757, Acyl_transf_3, Acyltransferase family	NA|86aa|down_0|CP024738.1_1030200_1030458_-	NA	NA|98aa|down_1|CP024738.1_1030454_1030748_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|207aa|down_2|CP024738.1_1030798_1031419_-	PHA00662, PHA00662, hypothetical protein	NA|72aa|down_3|CP024738.1_1031734_1031950_+	NA	NA|256aa|down_4|CP024738.1_1031958_1032726_+	pfam12236, Head-tail_con, Bacteriophage head to tail connecting protein	NA|296aa|down_5|CP024738.1_1032704_1033592_+	pfam12236, Head-tail_con, Bacteriophage head to tail connecting protein	NA|94aa|down_6|CP024738.1_1033588_1033870_+	NA	NA|294aa|down_7|CP024738.1_1033862_1034744_+	NA	NA|168aa|down_8|CP024738.1_1035413_1035917_+	pfam13098, Thioredoxin_2, Thioredoxin-like domain	NA|115aa|down_9|CP024738.1_1036097_1036442_+	TIGR04535, conserved_hypothetical_protein, ferritin-like protein
GCA_003716935.1_ASM371693v1	CP024738	Akkermansia muciniphila strain AMDK-3 chromosome, complete genome	2	1098742-1099501	2,2,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas9,cas1,cas2	DEDDh,cas3,cas9,cas1,cas2,DinG,csa3	Type II-A,Type II-B,Type II-C, Type II-B, or Type II-C?	GTTGTACTGTGCCTTATTTTGGATTCAAGGCAAAAC,GTTGTACTGTGCCTTATTTTGGATTCAAGGCAAAAC,CGTTGTACTGTGCCTTATTTTGGATTCAAGGCAAAAC,GTTGTACTGTGCCTTATTTTGGATTCAAGGCAAAAC	36,36,37,36	0	0	NA	NA	NA:NA:NA:NA	11,11,8,8	11	TypeII-A,TypeII-B,TypeII-C,TypeII-B,orTypeII-C?	DEDDh,cas3,cas9,cas1,cas2,DinG,csa3	NA|348aa|up_3|CP024738.1_1094596_1095640_+,NA|62aa|down_7|CP024738.1_1106737_1106923_+	NA|162aa|up_9|CP024738.1_1087463_1087949_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|205aa|up_8|CP024738.1_1089097_1089712_-	PRK00043, thiE, thiamine phosphate synthase	NA|310aa|up_7|CP024738.1_1089730_1090660_-	TIGR01136, Cysteine_synthase, cysteine synthase	NA|429aa|up_6|CP024738.1_1090696_1091983_-	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]	NA|147aa|up_5|CP024738.1_1092118_1092559_-	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein	NA|369aa|up_4|CP024738.1_1092658_1093765_-	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|348aa|up_3|CP024738.1_1094596_1095640_+	NA	cas9|571aa|up_2|CP024738.1_1095723_1097436_+	pfam13395, HNH_4, HNH endonuclease	cas1|312aa|up_1|CP024738.1_1097446_1098382_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|104aa|up_0|CP024738.1_1098369_1098681_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|357aa|down_0|CP024738.1_1099572_1100643_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|81aa|down_1|CP024738.1_1100932_1101175_+	sd00010, SLR, Sel1-like repeat	NA|205aa|down_2|CP024738.1_1101223_1101838_+	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|276aa|down_3|CP024738.1_1101913_1102741_-	pfam07885, Ion_trans_2, Ion channel	NA|614aa|down_4|CP024738.1_1102831_1104673_-	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|485aa|down_5|CP024738.1_1104681_1106136_+	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like	NA|205aa|down_6|CP024738.1_1106105_1106720_+	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like	NA|62aa|down_7|CP024738.1_1106737_1106923_+	NA	NA|395aa|down_8|CP024738.1_1106915_1108100_+	COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism]	NA|342aa|down_9|CP024738.1_1108266_1109292_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated
