The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	929492	936804	4821321	integrase,protease	Dickeya_phage(16.67%)	6	930743:930757	941922:941936
AYR54783.1|929492_930611_+	hypothetical protein	NA	A0A140XAI1	Dickeya_phage	39.8	8.1e-09
AYR54784.1|930607_932554_+	macrolide transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
930743:930757	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
AYR54785.1|932683_932905_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
AYR54786.1|933228_933549_+|protease	ATP-dependent Clp protease adaptor protein	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
AYR54787.1|933579_935856_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	1.8e-164
AYR54788.1|936426_936804_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
941922:941936	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
>prophage 2
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	1007734	1085047	4821321	integrase,transposase,terminase,tail,protease	Salmonella_phage(73.33%)	93	989813:989832	1060408:1060427
989813:989832	attL	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYR54838.1|1007734_1009075_-|integrase	integrase	integrase	S4TSP2	Salmonella_phage	99.8	7.9e-261
AYR54839.1|1009071_1009320_-	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
AYR54840.1|1009360_1009606_-	bacteriophage protein	NA	S4TR31	Salmonella_phage	96.2	1.3e-36
AYR54841.1|1009605_1010487_-	DNA methylase	NA	A0A0M4R347	Salmonella_phage	93.0	1.2e-153
AYR54842.1|1010483_1011548_-	bacteriophage protein	NA	T1SBJ4	Salmonella_phage	74.6	6.3e-152
AYR54843.1|1011625_1012306_-	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	98.7	1.9e-130
AYR54844.1|1012302_1013088_-	bacteriophage recombination protein	NA	A0A0M4RD39	Salmonella_phage	99.6	9.7e-150
AYR54845.1|1013093_1013390_-	host-nuclease inhibitor protein	NA	A0A0M5M5Z9	Salmonella_phage	96.9	4.4e-47
AYR54846.1|1013480_1013681_-	prophage Kil protein	NA	G8C7T2	Escherichia_phage	48.4	2.4e-12
AYR54847.1|1013969_1014374_-	DNA-binding protein	NA	H6WRX4	Salmonella_phage	99.3	7.1e-72
AYR54848.1|1014705_1015080_+	DNA-binding protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
AYR54849.1|1015164_1016148_+	bacteriophage protein	NA	H6WRX7	Salmonella_phage	99.7	2.1e-162
AYR54850.1|1016150_1016900_+	DNA replication protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
AYR54851.1|1016910_1017258_+	DNA-binding protein	NA	H6WRX9	Salmonella_phage	90.4	4.8e-53
AYR54852.1|1017254_1017779_+	bacteriophage protein	NA	A0A220NQV2	Salmonella_phage	99.4	1.8e-91
AYR54853.1|1017778_1018252_+	methyltransferase	NA	H9C170	Pectobacterium_phage	80.1	1.6e-67
AYR54854.1|1018255_1018828_+	bacteriophage protein	NA	S4TSR6	Salmonella_phage	68.0	1.3e-66
AYR54855.1|1018921_1019188_+	bacteriophage protein	NA	S4TNF2	Salmonella_phage	100.0	1.5e-46
AYR54856.1|1019269_1019431_+	bacteriophage protein	NA	NA	NA	NA	NA
AYR54857.1|1019863_1020361_+	bacteriophage protein	NA	NA	NA	NA	NA
AYR54858.1|1020545_1020785_+	damage-inducible protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
AYR54859.1|1020774_1021080_+	bacteriophage protein	NA	H6WRY6	Salmonella_phage	100.0	9.8e-42
AYR54860.1|1021119_1021722_+	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
AYR54861.1|1021930_1022542_+	bacteriophage lambda protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.5	2.5e-92
AYR54862.1|1022674_1023472_+	prophage antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	3.4e-150
AYR54863.1|1023870_1023996_+	bacteriophage protein	NA	NA	NA	NA	NA
AYR54864.1|1024131_1024581_-	lipoprotein	NA	NA	NA	NA	NA
AYR54865.1|1024797_1025187_+	prophage membrane protein	NA	K7PHB9	Enterobacterial_phage	70.2	3.1e-40
AYR54866.1|1025173_1025455_+	prophage membrane protein	NA	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
AYR54867.1|1025454_1026069_+	bacteriophage protein	NA	Q8HA86	Salmonella_phage	93.1	3.2e-108
AYR54868.1|1026288_1026543_+	hypothetical protein	NA	NA	NA	NA	NA
AYR54869.1|1026647_1027025_+	hypothetical protein	NA	Q6UAR9	Klebsiella_phage	68.5	4.9e-43
AYR54870.1|1027088_1027349_+	hypothetical protein	NA	NA	NA	NA	NA
AYR54871.1|1027438_1028191_+|terminase	prophage terminase small subunit	terminase	A0A0M3ULJ9	Salmonella_phage	56.5	3.4e-11
AYR54872.1|1028156_1029560_+	bacteriophage protein	NA	A0A077KAW0	Edwardsiella_phage	70.1	6.5e-189
AYR54873.1|1029559_1031026_+	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	96.7	6.4e-272
AYR54874.1|1031120_1031651_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	87.4	8.7e-86
AYR54875.1|1031665_1032898_+	hypothetical protein	NA	A0A0M4R5A6	Salmonella_phage	99.0	1.4e-227
AYR54876.1|1032902_1033400_+	bacteriophage protein	NA	A0A0M4QWZ6	Salmonella_phage	99.4	8.7e-88
AYR54877.1|1033411_1034353_+	bacteriophage protein	NA	A0A0M3ULD3	Salmonella_phage	100.0	3.1e-179
AYR54878.1|1034394_1034763_+	bacteriophage protein	NA	A0A0M4RTX5	Salmonella_phage	100.0	8.7e-61
AYR54879.1|1034728_1035136_+	bacteriophage protein	NA	A0A0M5M3S2	Salmonella_phage	97.8	7.1e-72
AYR54880.1|1035132_1035687_+	bacteriophage protein	NA	A0A0M4S631	Salmonella_phage	100.0	4.8e-95
AYR54881.1|1035673_1036063_+	bacteriophage protein	NA	A0A0M3ULK0	Salmonella_phage	98.4	6.0e-68
AYR54882.1|1036037_1036601_+	bacteriophage protein	NA	A0A0M4R331	Salmonella_phage	75.3	8.9e-81
AYR54883.1|1036604_1037750_+	bacteriophage protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	74.5	2.2e-163
AYR54884.1|1037761_1038202_+	bacteriophage protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	74.7	3.5e-56
AYR54885.1|1038205_1038658_+	bacteriophage protein	NA	A0A0M4S6U8	Salmonella_phage	76.6	1.9e-57
AYR54886.1|1038835_1040788_+	bacteriophage protein	NA	A0A0M4REK7	Salmonella_phage	56.0	1.8e-181
AYR54887.1|1040787_1041438_+	bacteriophage protein	NA	A0A0M3ULD5	Salmonella_phage	60.6	3.0e-56
AYR54888.1|1041441_1041744_+	bacteriophage protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	57.0	2.0e-26
AYR54889.1|1041746_1042778_+	bacteriophage protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	51.4	1.2e-96
AYR54890.1|1042774_1043110_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	52.2	1.1e-20
AYR54891.1|1043304_1044036_+	bacteriophage protein	NA	NA	NA	NA	NA
AYR54892.1|1044035_1044464_+	bacteriophage protein	NA	NA	NA	NA	NA
AYR54893.1|1044522_1045278_+	bacteriophage protein	NA	A0A0M5M1K7	Salmonella_phage	85.3	4.1e-105
AYR54894.1|1045365_1045503_+	bacteriophage protein	NA	A0A0M4S639	Salmonella_phage	100.0	2.0e-18
AYR54895.1|1045518_1045872_+	bacteriophage protein	NA	A0A0M4R339	Salmonella_phage	98.3	3.2e-60
AYR54896.1|1045872_1047072_+	bacteriophage protein	NA	A0A0M4RD32	Salmonella_phage	97.2	2.5e-213
AYR54897.1|1047068_1047749_+	bacteriophage protein	NA	A0A0M5M1K4	Salmonella_phage	98.7	6.9e-128
AYR54898.1|1047748_1049260_+|tail	bacteriophage tail protein	tail	S4TP62	Salmonella_phage	59.1	1.7e-110
AYR54899.1|1049274_1049793_+|tail	tail fiber protein	tail	A0A1B0VCD0	Salmonella_phage	62.8	1.7e-46
AYR54900.1|1050714_1051416_-	hypothetical protein	NA	NA	NA	NA	NA
AYR54901.1|1051728_1052007_-	hypothetical protein	NA	S4TNM0	Salmonella_phage	92.3	2.4e-26
AYR54902.1|1052432_1055045_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	1.1e-19
AYR54903.1|1055252_1056263_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AYR54904.1|1056425_1056971_+	hypothetical protein	NA	NA	NA	NA	NA
AYR54905.1|1056967_1058077_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AYR54906.1|1058175_1060284_+	23S rRNA m(2)G2445 methyltransferase	NA	W6LLI2	Streptococcus_phage	29.6	5.1e-20
AYR54907.1|1060296_1062204_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
1060408:1060427	attR	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYR54908.1|1062218_1063472_+	inner membrane protein	NA	NA	NA	NA	NA
AYR54909.1|1063476_1065117_+	paraquat-inducible protein B	NA	NA	NA	NA	NA
AYR54910.1|1065113_1065677_+	lipoprotein	NA	NA	NA	NA	NA
AYR54911.1|1065930_1066098_+	ribosome modulation factor	NA	NA	NA	NA	NA
AYR54912.1|1066197_1066716_-	D-3-hydroxydecanoyl-(acyl carrier-protein) dehydratase	NA	NA	NA	NA	NA
AYR54913.1|1066784_1068545_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AYR54914.1|1068730_1069183_+	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA	NA
AYR54915.1|1069254_1070307_-	outer membrane protein A	NA	NA	NA	NA	NA
AYR54916.1|1070661_1071171_-	cell division inhibitor	NA	NA	NA	NA	NA
AYR54917.1|1071387_1071993_+	competence-specific transcriptional regulator TfoX	NA	NA	NA	NA	NA
AYR54918.1|1071979_1074133_-	inner membrane protein	NA	NA	NA	NA	NA
AYR54919.1|1074151_1074598_-	hypothetical protein	NA	NA	NA	NA	NA
AYR54920.1|1074721_1076776_+	helicase IV	NA	A7KV33	Bacillus_phage	27.6	6.5e-20
AYR54921.1|1076811_1077270_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AYR54922.1|1077364_1078027_-	hypothetical protein	NA	NA	NA	NA	NA
AYR54923.1|1078197_1078614_+	hypothetical protein	NA	NA	NA	NA	NA
AYR54924.1|1078658_1078976_-	heat shock protein HspQ	NA	NA	NA	NA	NA
AYR54925.1|1079033_1080245_-	23S rRNA m(5)C1962 methyltransferase	NA	NA	NA	NA	NA
AYR54926.1|1081376_1081835_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYR54927.1|1082571_1082853_+	acylphosphatase	NA	NA	NA	NA	NA
AYR54928.1|1082849_1083179_-	sulfite reductase	NA	NA	NA	NA	NA
AYR54929.1|1083265_1083925_-	hypothetical protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
AYR54930.1|1084588_1085047_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 3
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	1528343	1601941	4821321	plate,transposase,head,tRNA,protease,tail	Burkholderia_virus(44.12%)	72	NA	NA
AYR55328.1|1528343_1528802_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYR55329.1|1529304_1529586_+	stress response protein	NA	NA	NA	NA	NA
AYR55330.1|1529854_1530676_+|protease	serine protease	protease	NA	NA	NA	NA
AYR55331.1|1530710_1531040_-	multidrug efflux system protein MdtI	NA	NA	NA	NA	NA
AYR55332.1|1531026_1531389_-	multidrug efflux system protein MdtJ	NA	NA	NA	NA	NA
AYR55333.1|1531500_1531671_-	hypothetical protein	NA	NA	NA	NA	NA
AYR55334.1|1531805_1532840_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55335.1|1533014_1534403_-	pyridine nucleotide transhydrogenase subunit beta	NA	NA	NA	NA	NA
AYR55336.1|1534413_1535943_-	pyridine nucleotide transhydrogenase subunit alpha	NA	NA	NA	NA	NA
AYR55337.1|1536469_1537414_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55338.1|1537595_1537985_-	bacteriophage transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	54.2	4.5e-31
AYR55339.1|1537956_1538409_-	hypothetical protein	NA	A4JWM5	Burkholderia_virus	46.6	1.2e-24
AYR55340.1|1538603_1538834_-	hypothetical protein	NA	NA	NA	NA	NA
AYR55341.1|1538830_1539514_-	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	37.3	2.6e-34
AYR55342.1|1540098_1540401_-	hypothetical protein	NA	NA	NA	NA	NA
AYR55343.1|1540971_1541502_-	bacteriophage host-nuclease inhibitor protein	NA	L7P7T1	Pseudomonas_phage	66.1	3.4e-58
AYR55344.1|1541801_1542968_-	ExeA protein	NA	A4JWN1	Burkholderia_virus	59.7	3.3e-122
AYR55345.1|1542978_1544748_-	hypothetical protein	NA	Q6QIE0	Burkholderia_phage	68.5	2.8e-229
AYR55346.1|1546192_1546543_+	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	4.5e-22
AYR55347.1|1547257_1547908_+	lipoprotein	NA	Q5ZQY9	Pseudomonas_phage	32.9	8.1e-09
AYR55348.1|1548230_1548542_+	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	9.4e-32
AYR55349.1|1548541_1549087_+	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.6	9.3e-59
AYR55350.1|1549083_1550679_+	hypothetical protein	NA	A4JWJ4	Burkholderia_virus	62.6	9.3e-184
AYR55351.1|1550678_1552175_+	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	59.6	8.0e-169
AYR55352.1|1552155_1552977_+|head	phage head morphogenesis protein	head	A4JWJ6	Burkholderia_virus	61.2	5.3e-98
AYR55353.1|1552979_1553438_+	bacteriophage protein	NA	Q6QIB8	Burkholderia_phage	44.8	1.2e-30
AYR55354.1|1553652_1554768_+	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.1	7.9e-97
AYR55355.1|1554782_1555736_+	hypothetical protein	NA	A4JWK0	Burkholderia_virus	44.5	5.2e-65
AYR55356.1|1555745_1556084_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55357.1|1556085_1556532_+	hypothetical protein	NA	A4JWK2	Burkholderia_virus	52.3	2.2e-34
AYR55358.1|1556531_1556996_+	hypothetical protein	NA	Q6QIB2	Burkholderia_phage	51.7	9.1e-39
AYR55359.1|1557236_1558664_+|tail	bacteriophage tail sheath protein	tail	A4JWK5	Burkholderia_virus	77.4	3.7e-216
AYR55360.1|1558663_1559185_+|tail	tail core protein	tail	A4JWK6	Burkholderia_virus	68.2	8.0e-68
AYR55361.1|1559187_1559469_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55362.1|1559566_1559902_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55363.1|1560077_1562543_+	bacteriophage protein	NA	A4JWL0	Burkholderia_virus	42.5	1.1e-167
AYR55364.1|1562542_1563427_+	hypothetical protein	NA	A4JWL1	Burkholderia_virus	47.0	7.5e-50
AYR55365.1|1563423_1563639_+|tail	bacteriophage tail fiber protein	tail	Q6QIA3	Burkholderia_phage	60.0	2.4e-18
AYR55366.1|1563626_1564781_+	bacteriophage regulatory protein	NA	Q6QIA2	Burkholderia_phage	47.1	4.7e-84
AYR55367.1|1564777_1565305_+|plate	bacteriophage baseplate protein	plate	Q6QIA1	Burkholderia_phage	46.5	1.5e-21
AYR55368.1|1565361_1565709_+|plate	bacteriophage baseplate protein	plate	Q6QIA0	Burkholderia_phage	60.6	8.6e-34
AYR55369.1|1565699_1566803_+|plate	bacteriophage baseplate assembly protein	plate	Q6QI99	Burkholderia_phage	54.3	5.4e-106
AYR55370.1|1566795_1567374_+|tail	bacteriophage tail fiber protein	tail	A4JWL7	Burkholderia_virus	65.8	6.4e-66
AYR55371.1|1567376_1568402_+|tail	bacteriophage tail fiber protein	tail	M1TAS6	Escherichia_phage	53.3	1.6e-64
AYR55372.1|1568915_1569533_+|tail	bacteriophage tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	59.9	5.8e-65
AYR55373.1|1571043_1571616_+	DNA-invertase	NA	A0A0A7NPV4	Enterobacteria_phage	84.7	8.8e-84
AYR55374.1|1571896_1573279_+	amino acid permease	NA	NA	NA	NA	NA
AYR55375.1|1573340_1573676_-	hypothetical protein	NA	NA	NA	NA	NA
AYR55376.1|1573802_1574534_+	two-component response regulator	NA	NA	NA	NA	NA
AYR55377.1|1575014_1576166_+	outer membrane protein	NA	Q1MVN1	Enterobacteria_phage	59.1	4.2e-117
AYR55378.1|1576318_1578025_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AYR55379.1|1578132_1579437_+	two component sensor kinase	NA	W8CYF6	Bacillus_phage	22.7	5.7e-14
AYR55380.1|1579512_1580442_+	DNA sequence-specific contrahelicase	NA	NA	NA	NA	NA
AYR55381.1|1580438_1581842_-	fumarate hydratase class II	NA	NA	NA	NA	NA
AYR55382.1|1582009_1583656_-	Fumarate hydratase class I	NA	NA	NA	NA	NA
AYR55383.1|1583855_1585031_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AYR55384.1|1585133_1586642_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55385.1|1587347_1588349_+	adenosine deaminase	NA	NA	NA	NA	NA
AYR55386.1|1588422_1589538_-	oxidoreductase	NA	NA	NA	NA	NA
AYR55387.1|1589640_1589796_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55388.1|1590094_1590310_+	oriC-binding nucleoid-associated protein	NA	NA	NA	NA	NA
AYR55389.1|1590398_1590839_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55390.1|1590915_1591497_+	Na(+)-translocating NADH-quinone reductase subunit E	NA	NA	NA	NA	NA
AYR55391.1|1591496_1592075_+	ferredoxin-like protein	NA	NA	NA	NA	NA
AYR55392.1|1592067_1594089_+	NADH reducing dehydrogenase	NA	NA	NA	NA	NA
AYR55393.1|1594089_1595148_+	electron transport complex protein RnfD	NA	NA	NA	NA	NA
AYR55394.1|1595151_1595772_+	electron transport complex protein RnfG	NA	NA	NA	NA	NA
AYR55395.1|1595774_1596467_+	electron transport complex protein RsxE	NA	NA	NA	NA	NA
AYR55396.1|1596466_1597102_+	endonuclease III	NA	NA	NA	NA	NA
AYR55397.1|1597702_1599208_+	proton/oligopeptide symporter	NA	NA	NA	NA	NA
AYR55398.1|1599312_1599918_+	glutathione S-transferase	NA	NA	NA	NA	NA
AYR55399.1|1600666_1601941_-|tRNA	tyrosyl-tRNA synthetase	tRNA	K4F5T3	Cronobacter_phage	42.1	1.6e-85
>prophage 4
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	1782972	1787384	4821321		Escherichia_phage(50.0%)	6	NA	NA
AYR55583.1|1782972_1783212_+	virulence protein	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AYR55584.1|1784084_1784894_+	toxin-like protein	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
AYR55585.1|1784966_1785344_+	hypothetical protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AYR55586.1|1785491_1786034_-	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
AYR55587.1|1786225_1786954_-	pertussis toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	53.3	4.9e-63
AYR55588.1|1786970_1787384_-	pertussis-like toxin subunit	NA	A0A0U2KD34	Escherichia_phage	38.6	1.4e-19
>prophage 5
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	1887459	1923546	4821321	holin,integrase	Salmonella_phage(36.59%)	47	1914012:1914025	1929071:1929084
AYR55675.1|1887459_1887813_-	hypothetical protein	NA	A0A0M4RTY3	Salmonella_phage	86.5	1.0e-29
AYR55676.1|1887812_1888880_-	bacteriophage protein	NA	A0A0M4QX01	Salmonella_phage	82.8	7.7e-158
AYR55677.1|1888882_1889185_-	bacteriophage protein	NA	A0A0M4R5B7	Salmonella_phage	92.0	2.2e-49
AYR55678.1|1889184_1889772_-	bacteriophage protein	NA	A0A0M3ULD5	Salmonella_phage	88.0	1.5e-83
AYR55679.1|1889771_1891760_-	bacteriophage protein	NA	A0A0M4REK7	Salmonella_phage	74.8	1.0e-272
AYR55680.1|1891937_1892390_-	bacteriophage protein	NA	A0A0M4S6U8	Salmonella_phage	72.7	4.7e-56
AYR55681.1|1892393_1892834_-	bacteriophage protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	75.3	7.0e-57
AYR55682.1|1892844_1893990_-	hypothetical protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	73.5	1.0e-160
AYR55683.1|1893993_1894557_-	bacteriophage protein	NA	A0A0M4R331	Salmonella_phage	75.7	1.7e-79
AYR55684.1|1894531_1894921_-	bacteriophage protein	NA	A0A0M3ULK0	Salmonella_phage	96.1	2.5e-66
AYR55685.1|1894907_1895462_-	bacteriophage protein	NA	A0A0M4S631	Salmonella_phage	71.7	8.0e-66
AYR55686.1|1895458_1895866_-	bacteriophage protein	NA	A0A0M5M3S2	Salmonella_phage	94.8	9.7e-69
AYR55687.1|1896240_1897182_-	bacteriophage protein	NA	A0A0M3ULD3	Salmonella_phage	86.9	3.2e-155
AYR55688.1|1897193_1897700_-	bacteriophage protein	NA	A0A0M4QWZ6	Salmonella_phage	79.9	3.7e-70
AYR55689.1|1897703_1898924_-	hypothetical protein	NA	A0A0M4R5A6	Salmonella_phage	88.0	1.2e-199
AYR55690.1|1898938_1899469_-	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	84.0	1.7e-81
AYR55691.1|1899563_1901030_-	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	92.4	1.8e-261
AYR55692.1|1901029_1902433_-	bacteriophage protein	NA	A0A077KAW0	Edwardsiella_phage	69.2	3.2e-188
AYR55693.1|1903202_1903382_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55694.1|1903371_1903716_-	hypothetical protein	NA	Q8SBD8	Shigella_phage	74.5	1.4e-36
AYR55695.1|1903910_1904387_-	endolysin	NA	Q8SBE0	Shigella_phage	96.2	1.0e-85
AYR55696.1|1904390_1904732_-|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	89.2	4.0e-52
AYR55697.1|1905079_1905649_-	hypothetical protein	NA	NA	NA	NA	NA
AYR55698.1|1905882_1906572_-	bacteriophage protein	NA	A0A0N7C203	Escherichia_phage	77.9	2.1e-52
AYR55699.1|1906712_1907267_-	hypothetical protein	NA	A0A0U2S606	Escherichia_phage	71.0	1.3e-71
AYR55700.1|1907263_1907554_-	bacteriophage protein	NA	A0A0U2KD41	Escherichia_phage	89.6	3.3e-47
AYR55701.1|1907553_1908153_-	hypothetical protein	NA	A0A0U2RT94	Escherichia_phage	93.0	5.9e-107
AYR55702.1|1908224_1908437_-	hypothetical protein	NA	NA	NA	NA	NA
AYR55703.1|1908714_1908927_-	Hok/Gef family protein	NA	A0A0P0ZAX5	Stx2-converting_phage	95.7	9.6e-28
AYR55704.1|1909295_1910228_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55705.1|1910224_1910779_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55706.1|1910877_1911285_-	bacteriophage protein	NA	A0A2R2Z307	Escherichia_phage	95.8	1.7e-57
AYR55707.1|1911291_1911714_-	hypothetical protein	NA	A0A0U2QQN3	Escherichia_phage	91.3	1.7e-63
AYR55708.1|1911729_1912524_-	hypothetical protein	NA	A0A0U2SAW4	Escherichia_phage	88.5	1.3e-117
AYR55709.1|1912513_1913260_-	DNA replication protein	NA	V5UQI5	Shigella_phage	79.3	2.0e-112
AYR55710.1|1913266_1914055_-	hypothetical protein	NA	G9L6A8	Escherichia_phage	65.0	3.9e-42
1914012:1914025	attL	TTATCCGGCGTAAT	NA	NA	NA	NA
AYR55711.1|1914132_1914555_-	hypothetical protein	NA	A0A0U2RXZ9	Escherichia_phage	94.3	3.4e-69
AYR55712.1|1914551_1914794_-	cro repressor	NA	K7PKH4	Enterobacteria_phage	62.1	2.3e-17
AYR55713.1|1914890_1915310_+	regulator	NA	K7PH71	Enterobacterial_phage	60.6	3.1e-14
AYR55714.1|1915552_1915771_+	hypothetical protein	NA	M4QQ57	Salicola_phage	53.2	2.5e-07
AYR55715.1|1915924_1916137_-	hypothetical protein	NA	NA	NA	NA	NA
AYR55716.1|1916643_1916865_+	cell division inhibitor protein	NA	A0A0U2RTC4	Escherichia_phage	97.3	6.9e-37
AYR55717.1|1917109_1917385_+	bacteriophage protein	NA	A0A0U2QW85	Escherichia_phage	92.3	3.7e-40
AYR55718.1|1917484_1920613_+	exodeoxyribonuclease VIII	NA	A0A0U2I1R6	Escherichia_phage	79.5	0.0e+00
AYR55719.1|1920609_1921677_+	hypothetical protein	NA	A0A0U2S5Y9	Escherichia_phage	62.5	1.8e-114
AYR55720.1|1921855_1922116_+	gydaC	NA	A0A0U2QL97	Escherichia_phage	97.9	1.7e-18
AYR55721.1|1922469_1923546_+|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	51.7	6.9e-98
1929071:1929084	attR	TTATCCGGCGTAAT	NA	NA	NA	NA
>prophage 6
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	2027939	2035173	4821321		Morganella_phage(33.33%)	7	NA	NA
AYR55825.1|2027939_2029370_-	DNA-cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
AYR55826.1|2029443_2030139_-	hypothetical protein	NA	S4W232	Pandoravirus	27.5	2.1e-07
AYR55827.1|2030218_2030530_-	hypothetical protein	NA	NA	NA	NA	NA
AYR55828.1|2031180_2032365_+	outer membrane protein S1	NA	Q1MVN1	Enterobacteria_phage	56.4	1.4e-107
AYR55829.1|2032824_2033037_-	cold shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	1.5e-20
AYR55830.1|2033482_2034751_-	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	91.2	3.3e-224
AYR55831.1|2034753_2035173_-	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
>prophage 7
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	2118915	2129422	4821321		Enterobacteria_phage(37.5%)	10	NA	NA
AYR55908.1|2118915_2120229_-	dehydratase RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
AYR55909.1|2120255_2121335_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	1.3e-16
AYR55910.1|2121339_2122113_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AYR55911.1|2122128_2123103_-	reductase RfbI	NA	NA	NA	NA	NA
AYR55912.1|2123108_2123660_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	7.7e-53
AYR55913.1|2123660_2124539_-	TDP-glucose pyrophosphorylase	NA	I7I009	Enterobacteria_phage	64.8	2.3e-107
AYR55914.1|2124586_2125486_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	7.9e-31
AYR55915.1|2125485_2126571_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
AYR55916.1|2126947_2127841_-	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AYR55917.1|2128018_2129422_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	1.1e-21
>prophage 8
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	2205314	2214485	4821321	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AYR55974.1|2205314_2207348_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
AYR55975.1|2207588_2208047_+	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AYR55976.1|2208218_2208749_+	lipoprotein	NA	NA	NA	NA	NA
AYR55977.1|2208805_2209273_-	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AYR55978.1|2209319_2210039_-	two-component system response regulator	NA	NA	NA	NA	NA
AYR55979.1|2210035_2211721_-	two-component system sensor kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	1.1e-278
AYR55980.1|2211943_2212675_+	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AYR55981.1|2212734_2212842_+	hypothetical protein	NA	NA	NA	NA	NA
AYR55982.1|2212822_2213554_-	ABC transporter permease	NA	NA	NA	NA	NA
AYR55983.1|2213537_2214485_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 9
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	2750000	2763392	4821321	tail	Salmonella_phage(70.0%)	11	NA	NA
AYR56413.1|2750000_2750219_-	hypothetical protein	NA	Q53ZE7	Salmonella_virus	71.9	1.9e-18
AYR56414.1|2750309_2751410_-	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYR56415.1|2751406_2751892_-|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYR56416.1|2751888_2754966_-|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYR56417.1|2754958_2755078_-	hypothetical protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYR56418.1|2755092_2755395_-|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYR56419.1|2755449_2755965_-|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYR56420.1|2755974_2757147_-|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYR56421.1|2757289_2757862_-	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYR56422.1|2758539_2759655_+	glycosyltransferase	NA	NA	NA	NA	NA
AYR56423.1|2759735_2763392_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	28.6	1.0e-44
>prophage 10
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	3080774	3124477	4821321	transposase,tRNA,bacteriocin,protease	Bacillus_virus(33.33%)	44	NA	NA
AYR56710.1|3080774_3081233_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYR56711.1|3081422_3082502_-	fructose 1,6-bisphosphate aldolase	NA	NA	NA	NA	NA
AYR56712.1|3082603_3083767_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
AYR56713.1|3083788_3084835_-	D-erythrose 4-phosphate dehydrogenase	NA	NA	NA	NA	NA
AYR56714.1|3085208_3085634_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56715.1|3085659_3086238_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56716.1|3086271_3086946_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56717.1|3086927_3087611_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AYR56718.1|3087604_3088261_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.6	1.6e-09
AYR56719.1|3088365_3088824_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYR56720.1|3089012_3091004_-	transketolase	NA	NA	NA	NA	NA
AYR56721.1|3091279_3092038_+|protease	metalloprotease	protease	NA	NA	NA	NA
AYR56722.1|3092138_3093059_-	agmatine ureohydrolase	NA	NA	NA	NA	NA
AYR56723.1|3093286_3095263_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
AYR56724.1|3095271_3095403_-	hypothetical protein	NA	NA	NA	NA	NA
AYR56725.1|3095697_3095997_-	membrane protein	NA	NA	NA	NA	NA
AYR56726.1|3096052_3097207_+	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	63.9	1.5e-130
AYR56727.1|3097699_3099094_+	galactose-proton symport	NA	NA	NA	NA	NA
AYR56728.1|3099172_3099670_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56729.1|3099765_3100473_+	endonuclease I	NA	NA	NA	NA	NA
AYR56730.1|3100549_3101281_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AYR56731.1|3101300_3102248_+	glutathione synthetase	NA	NA	NA	NA	NA
AYR56732.1|3102463_3103027_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56733.1|3103026_3103443_+	Holliday junction resolvase	NA	NA	NA	NA	NA
AYR56734.1|3103489_3104176_-	global regulatory protein	NA	NA	NA	NA	NA
AYR56735.1|3104305_3105286_-	type II secretion system ATP-binding protein	NA	NA	NA	NA	NA
AYR56736.1|3105303_3106008_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56737.1|3106026_3106593_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56738.1|3106589_3106880_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56739.1|3106887_3107481_+	dITP/XTP pyrophosphatase	NA	NA	NA	NA	NA
AYR56740.1|3107473_3108610_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AYR56741.1|3108700_3109708_-	hypothetical protein	NA	NA	NA	NA	NA
AYR56742.1|3109840_3110887_-	L-asparaginase	NA	NA	NA	NA	NA
AYR56743.1|3111205_3111664_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYR56744.1|3111786_3112506_-	hypothetical protein	NA	NA	NA	NA	NA
AYR56745.1|3112555_3112882_-	hypothetical protein	NA	NA	NA	NA	NA
AYR56746.1|3112881_3113601_-|tRNA	tRNA m(7)G46 methyltransferase	tRNA	NA	NA	NA	NA
AYR56747.1|3113755_3114808_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AYR56748.1|3114835_3115111_+	oxidative damage protection protein	NA	NA	NA	NA	NA
AYR56749.1|3115223_3116309_+	membrane-bound lytic murein transglycosylase C	NA	A0A0H3V0Q1	Geobacillus_virus	39.0	5.8e-12
AYR56750.1|3116525_3117782_+	nucleoside permease	NA	NA	NA	NA	NA
AYR56751.1|3120392_3121100_+	hypothetical protein	NA	NA	NA	NA	NA
AYR56752.1|3123689_3123956_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AYR56753.1|3124198_3124477_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 11
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	3501660	3539718	4821321	plate,integrase,transposase,terminase,capsid,portal,tail	Salmonella_phage(82.05%)	46	3496624:3496638	3508790:3508804
3496624:3496638	attL	CGAATTTCTTTTTCA	NA	NA	NA	NA
AYR57082.1|3501660_3503307_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.5	9.0e-65
AYR57083.1|3503446_3503545_-	ilvGMEDA operon attenuator peptide	NA	NA	NA	NA	NA
AYR57084.1|3503800_3504130_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57085.1|3504170_3505223_-|integrase	bacteriophage integrase	integrase	A0A218M4I3	Erwinia_phage	57.3	3.6e-107
AYR57086.1|3505618_3506188_-	repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	43.4	2.5e-38
AYR57087.1|3506313_3506535_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57088.1|3506567_3507077_+	regulatory protein cII	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
AYR57089.1|3507251_3507476_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57090.1|3507498_3507840_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	98.2	1.7e-55
AYR57091.1|3507907_3508141_+	hypothetical protein	NA	E5G6L6	Salmonella_phage	94.8	2.0e-31
AYR57092.1|3508140_3508368_+	hypothetical protein	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
AYR57093.1|3508364_3509222_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.2	3.5e-161
3508790:3508804	attR	TGAAAAAGAAATTCG	NA	NA	NA	NA
AYR57094.1|3509218_3511633_+	endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
AYR57095.1|3511786_3511975_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	95.2	7.9e-26
AYR57096.1|3513942_3514857_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57097.1|3514853_3515594_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57098.1|3515628_3516666_-|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	89.5	1.3e-173
AYR57099.1|3516665_3518432_-|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	99.5	0.0e+00
AYR57100.1|3518574_3519408_+|capsid	capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	90.6	1.5e-121
AYR57101.1|3519424_3520483_+|capsid	major capsid protein	capsid	E5G6M6	Salmonella_phage	93.1	1.4e-180
AYR57102.1|3520486_3521137_+|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
AYR57103.1|3521169_3521697_+|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	89.0	2.1e-76
AYR57104.1|3521696_3521900_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	92.5	1.4e-31
AYR57105.1|3521903_3522119_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
AYR57106.1|3522138_3522612_+	lysozyme	NA	E5G6N1	Salmonella_phage	91.0	3.7e-80
AYR57107.1|3522613_3522991_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	2.3e-16
AYR57108.1|3522987_3523416_+	regulatory protein	NA	E5G6N2	Salmonella_phage	77.3	2.2e-47
AYR57109.1|3523511_3523943_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	95.1	1.5e-72
AYR57110.1|3523935_3524382_+|tail	phage tail completion protein	tail	A0A1S6L001	Salmonella_phage	85.6	6.6e-63
AYR57111.1|3524450_3525029_+|plate	phage baseplate assembly protein	plate	A0A1S6KZX7	Salmonella_phage	86.5	5.5e-94
AYR57112.1|3525025_3525385_+|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	84.9	6.1e-51
AYR57113.1|3525371_3526280_+|plate	phage baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	89.7	1.3e-142
AYR57114.1|3526272_3526878_+|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYR57115.1|3526874_3528389_+|tail	variable tail fiber protein	tail	M1TAS6	Escherichia_phage	73.2	6.8e-200
AYR57116.1|3528388_3528982_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	64.3	9.2e-60
AYR57117.1|3528953_3529394_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	68.0	3.1e-52
AYR57118.1|3529816_3530389_+	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYR57119.1|3530531_3531704_+|tail	bacteriophage major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYR57120.1|3531713_3532229_+|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYR57121.1|3532283_3532586_+|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYR57122.1|3532600_3532720_+	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYR57123.1|3532712_3535790_+|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYR57124.1|3535786_3536272_+|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYR57125.1|3536268_3537369_+	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYR57126.1|3537459_3537678_+	hypothetical protein	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AYR57127.1|3539259_3539718_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 12
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	3806641	3824050	4821321	transposase,integrase	Escherichia_phage(30.0%)	17	3804347:3804406	3828847:3829614
3804347:3804406	attL	GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC	NA	NA	NA	NA
AYR57346.1|3806641_3809608_-|transposase	transposase tn21	transposase	A0A1B0V7H9	Salmonella_phage	73.6	0.0e+00
AYR57347.1|3809610_3810171_-	Tn21 resolvase	NA	A0A1B0V7I5	Salmonella_phage	86.2	4.0e-49
AYR57348.1|3810296_3810860_-	transposon tn21 modulator protein	NA	NA	NA	NA	NA
AYR57349.1|3810849_3811863_-|integrase	phage integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AYR57350.1|3811894_3812494_+	dihydrofolate reductase	NA	A0A1B2IBQ4	Erwinia_phage	31.4	3.1e-15
AYR57351.1|3812690_3813071_+	Ethidium bromide-methyl viologen resistance protein EmrE	NA	NA	NA	NA	NA
AYR57352.1|3812977_3813904_+	sulfonamide-resistant dihydropteroate synthase sul1	NA	NA	NA	NA	NA
AYR57353.1|3814137_3814860_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	3.2e-139
AYR57354.1|3814892_3815159_+	resolvase	NA	Q1MVP4	Enterobacteria_phage	100.0	1.4e-36
AYR57355.1|3815341_3816202_+	beta-lactamase	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
AYR57356.1|3816781_3817504_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	3.2e-139
AYR57357.1|3818259_3819111_+	replication protein	NA	NA	NA	NA	NA
AYR57358.1|3819418_3820234_+	dihydropteroate synthase	NA	NA	NA	NA	NA
AYR57359.1|3820294_3821098_+	streptomycin phosphotransferase	NA	Q75ZG1	Hepacivirus	34.3	4.9e-24
AYR57360.1|3821097_3821934_+	streptomycin phosphotransferase	NA	NA	NA	NA	NA
AYR57361.1|3821994_3822717_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	3.2e-139
AYR57362.1|3822745_3824050_-|integrase	integrase	integrase	NA	NA	NA	NA
3828847:3829614	attR	GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATAGTGCGTTCACCGAATACGTGCGCAACAACCGTCTTCCGGAGCCTGTCATACGCGTAAAACAGCCAGCGCTGGCGCGATTTAGCCCCGACGTATCCCCACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGCGCGAGGTTACCGACTGCGGCCTGAGTTTTTTAAATGGCGGAAAATCGTGTTGAGGCCAACGCCCATAATGCGGGCGGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC	NA	NA	NA	NA
>prophage 13
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	4480932	4555202	4821321	plate,integrase,terminase,capsid,portal,tail	Salmonella_phage(82.61%)	75	4542446:4542462	4555361:4555377
AYR57926.1|4480932_4482882_+	hypothetical protein	NA	A0A2K9V411	Faecalibacterium_phage	38.3	5.9e-31
AYR57927.1|4482953_4483862_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57928.1|4483935_4484835_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57929.1|4484876_4485236_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57930.1|4485335_4485605_-	hypothetical protein	NA	NA	NA	NA	NA
AYR57931.1|4485736_4487011_-	UV protection protein	NA	F1C5A5	Cronobacter_phage	62.0	7.5e-152
AYR57932.1|4487230_4487608_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57933.1|4487694_4487913_-	hypothetical protein	NA	E5G6Q4	Salmonella_phage	75.0	4.9e-27
AYR57934.1|4487980_4489081_-	hypothetical protein	NA	E5G6Q3	Salmonella_phage	92.1	7.9e-190
AYR57935.1|4489077_4489563_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	93.2	9.4e-71
AYR57936.1|4489562_4492343_-	hypothetical protein	NA	A0A2H4JGB2	uncultured_Caudovirales_phage	41.1	3.5e-125
AYR57937.1|4492335_4492455_-	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	94.9	1.2e-14
AYR57938.1|4492469_4492772_-|tail	phage tail protein	tail	E5G6P9	Salmonella_phage	93.9	3.3e-42
AYR57939.1|4492826_4493342_-|tail	major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
AYR57940.1|4493351_4494524_-|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	9.8e-223
AYR57941.1|4495058_4495781_+	invasion-associated secreted protein	NA	NA	NA	NA	NA
AYR57942.1|4495978_4496386_-|tail	phage tail fiber protein	tail	A0A1B0V844	Salmonella_phage	84.2	4.1e-59
AYR57943.1|4496392_4498012_-|tail	phage tail fiber protein	tail	E5G6P0	Salmonella_phage	90.9	2.7e-154
AYR57944.1|4498008_4498614_-|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYR57945.1|4498606_4499515_-|plate	phage baseplate assembly protein	plate	E5G6N8	Salmonella_phage	97.0	5.2e-155
AYR57946.1|4499501_4499861_-|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	96.6	6.8e-58
AYR57947.1|4499857_4500436_-|plate	phage baseplate assembly protein	plate	E5G6N6	Salmonella_phage	99.5	3.9e-108
AYR57948.1|4500504_4500951_-|tail	phage tail completion protein	tail	A0A1S6L001	Salmonella_phage	90.4	2.2e-66
AYR57949.1|4500943_4501375_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	99.3	1.1e-75
AYR57950.1|4501470_4501896_-	regulatory protein	NA	A0A1S6KZX8	Salmonella_phage	97.9	2.5e-67
AYR57951.1|4501895_4502273_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	99.2	1.5e-60
AYR57952.1|4502277_4502748_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.4	1.0e-85
AYR57953.1|4502767_4502983_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	98.6	3.8e-32
AYR57954.1|4502986_4503190_-|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
AYR57955.1|4503189_4503654_-|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	97.4	7.1e-84
AYR57956.1|4503747_4504398_-|terminase	phage terminase	terminase	E5G6M7	Salmonella_phage	99.5	2.4e-114
AYR57957.1|4504401_4505466_-|capsid	major capsid protein	capsid	A0A1S6KZZ3	Salmonella_phage	98.3	1.3e-194
AYR57958.1|4505482_4506316_-|capsid	capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	87.4	6.1e-126
AYR57959.1|4506458_4508225_+|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	96.4	0.0e+00
AYR57960.1|4508221_4509268_+|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	86.6	2.1e-176
AYR57961.1|4509316_4510012_-	hypothetical protein	NA	NA	NA	NA	NA
AYR57962.1|4510031_4511096_-	hypothetical protein	NA	NA	NA	NA	NA
AYR57963.1|4511092_4512157_-	hypothetical protein	NA	NA	NA	NA	NA
AYR57964.1|4513081_4515490_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	95.1	0.0e+00
AYR57965.1|4515480_4516341_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	81.8	3.4e-132
AYR57966.1|4516337_4516922_-	exonuclease	NA	A0A1S6L012	Salmonella_phage	73.7	1.1e-76
AYR57967.1|4516918_4517146_-	hypothetical protein	NA	A0A1S6L007	Salmonella_phage	94.7	1.0e-35
AYR57968.1|4517145_4517379_-	hypothetical protein	NA	A0A1S6L021	Salmonella_phage	84.4	9.8e-26
AYR57969.1|4517446_4517788_-	hypothetical protein	NA	A0A1S6L019	Salmonella_phage	99.1	4.6e-56
AYR57970.1|4517751_4517952_-	hypothetical protein	NA	A0A1S6L005	Salmonella_phage	97.0	4.6e-32
AYR57971.1|4517959_4518469_-	phage regulatory protein	NA	A0A1S6L008	Salmonella_phage	94.1	1.3e-83
AYR57972.1|4518501_4518744_-	phage regulatory protein	NA	A0A1S6KZZ6	Salmonella_phage	98.8	2.3e-38
AYR57973.1|4518860_4519493_+	phage repressor protein cI	NA	A0A1S6KZZ7	Salmonella_phage	58.6	1.4e-66
AYR57974.1|4519496_4520522_+|integrase	phage integrase	integrase	A0A1S6L016	Salmonella_phage	98.2	2.7e-200
AYR57975.1|4520628_4520982_-	protein samA'	NA	I6S1S3	Salmonella_phage	59.3	6.7e-10
AYR57976.1|4521598_4521886_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57977.1|4521896_4522787_+	methyltransferase	NA	NA	NA	NA	NA
AYR57978.1|4522786_4523533_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57979.1|4523834_4525805_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYR57980.1|4525824_4527129_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYR57981.1|4527151_4527847_-	Vi polysaccharide exporter ATP-binding protein	NA	NA	NA	NA	NA
AYR57982.1|4527872_4528667_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYR57983.1|4528676_4529744_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYR57984.1|4529788_4531525_-	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AYR57985.1|4531524_4534020_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYR57986.1|4534043_4535090_-	Vi polysaccharide biosynthesis epimerase	NA	A0A2K9L0I7	Tupanvirus	45.0	1.4e-74
AYR57987.1|4535092_4536370_-	Vi polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase	NA	M1HYW7	Paramecium_bursaria_Chlorella_virus	26.7	1.3e-21
AYR57988.1|4536614_4537154_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYR57989.1|4538007_4539519_+	DNA helicase	NA	A0A126DN25	Acinetobacter_phage	29.0	2.0e-42
AYR57990.1|4539502_4541092_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57991.1|4541255_4542269_+|integrase	phage integrase	integrase	NA	NA	NA	NA
4542446:4542462	attL	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
AYR57992.1|4542695_4542989_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57993.1|4542985_4543474_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57994.1|4543653_4544106_-	hypothetical protein	NA	NA	NA	NA	NA
AYR57995.1|4549328_4549790_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57996.1|4549786_4550008_+	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	58.3	4.6e-17
AYR57997.1|4550864_4551647_+	hypothetical protein	NA	NA	NA	NA	NA
AYR57998.1|4552273_4552498_-	hypothetical protein	NA	NA	NA	NA	NA
AYR57999.1|4552627_4553632_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
AYR58000.1|4553942_4555202_-|integrase	bacteriophage integrase	integrase	B7SYF8	Stenotrophomonas_phage	41.7	3.2e-78
4555361:4555377	attR	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
>prophage 14
CP029950	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 chromosome, complete genome	4821321	4697458	4703934	4821321	capsid	Enterobacteria_phage(66.67%)	8	NA	NA
AYR58137.1|4697458_4698535_-	protein kinase	NA	A0A2H4UU60	Bodo_saltans_virus	28.2	7.8e-17
AYR58138.1|4698531_4699605_-	protein kinase	NA	G9BWE0	Planktothrix_phage	44.7	6.5e-56
AYR58139.1|4699579_4700743_-	hypothetical protein	NA	NA	NA	NA	NA
AYR58140.1|4701018_4701585_-	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	64.9	1.8e-60
AYR58141.1|4701600_4701840_-	hypothetical protein	NA	Q7M294	Enterobacteria_phage	60.5	3.7e-20
AYR58142.1|4701843_4702704_-|capsid	phage capsid protein	capsid	NA	NA	NA	NA
AYR58143.1|4703126_4703450_+	phage DNA binding protein	NA	Q7M299	Enterobacteria_phage	70.0	3.6e-26
AYR58144.1|4703433_4703934_+	hypothetical protein	NA	Q7M2A7	Enterobacteria_phage	70.4	9.8e-31
>prophage 1
CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	106706	38	93094	106706	tail	Salmonella_phage(95.37%)	111	NA	NA
AYR58239.1|38_2267_+	hypothetical protein	NA	J9Q7Z2	Salmonella_phage	98.8	0.0e+00
AYR58240.1|2263_2707_+	hypothetical protein	NA	J9Q7S4	Salmonella_phage	97.9	3.0e-71
AYR58241.1|2800_3391_-	hypothetical protein	NA	NA	NA	NA	NA
AYR58242.1|3636_4068_+	hypothetical protein	NA	J9Q6I8	Salmonella_phage	100.0	4.0e-73
AYR58243.1|4187_5216_+	hypothetical protein	NA	J9Q7Z3	Salmonella_phage	98.8	1.1e-164
AYR58244.1|5276_6221_+	exonuclease	NA	J9Q7S6	Salmonella_phage	99.4	6.8e-182
AYR58245.1|6220_6487_+	hypothetical protein	NA	J9Q7G8	Salmonella_phage	100.0	1.6e-40
AYR58246.1|6489_7566_+	putative recombinase	NA	J9Q736	Salmonella_phage	99.7	5.5e-204
AYR58247.1|7861_8704_+	putative lipoprotein	NA	J9Q7Z4	Salmonella_phage	97.1	2.3e-125
AYR58248.1|8866_9238_+	hypothetical protein	NA	J9Q7S7	Salmonella_phage	98.4	3.0e-69
AYR58249.1|9221_9632_+	hypothetical protein	NA	J9Q7G9	Salmonella_phage	97.1	1.4e-75
AYR58250.1|9700_9976_+	hypothetical protein	NA	J9Q738	Salmonella_phage	96.7	5.9e-46
AYR58251.1|10016_10322_+	hypothetical protein	NA	J9Q7Z5	Salmonella_phage	90.8	4.9e-33
AYR58252.1|10321_10525_+	hypothetical protein	NA	J9Q7S8	Salmonella_phage	94.3	4.0e-31
AYR58253.1|11053_12109_-	putative replication protein A	NA	J9Q7H0	Salmonella_phage	98.0	1.5e-185
AYR58254.1|12853_13498_+	hypothetical protein	NA	J9Q739	Salmonella_phage	98.1	2.4e-122
AYR58255.1|13573_14068_+	hypothetical protein	NA	J9Q6J3	Salmonella_phage	97.6	2.3e-88
AYR58256.1|14099_14405_-	hypothetical protein	NA	J9Q7Z6	Salmonella_phage	97.0	2.0e-50
AYR58257.1|14831_15917_+	exonuclease	NA	J9Q7S9	Salmonella_phage	98.9	2.7e-206
AYR58258.1|15913_16150_+	hypothetical protein	NA	J9Q7H1	Salmonella_phage	98.4	1.1e-29
AYR58259.1|16146_18063_+	exonuclease	NA	J9Q741	Salmonella_phage	98.6	0.0e+00
AYR58260.1|18052_18799_+	hypothetical protein	NA	J9Q6J5	Salmonella_phage	98.0	4.4e-136
AYR58261.1|18811_19381_+	hypothetical protein	NA	J9Q7Z7	Salmonella_phage	99.5	1.7e-103
AYR58262.1|19458_21774_+	ribonucleotide-diphosphate reductase subunit alpha	NA	J9Q7T0	Salmonella_phage	99.7	0.0e+00
AYR58263.1|21881_23024_+	ribonucleotide-diphosphate reductase subunit beta	NA	J9Q7H3	Salmonella_phage	99.5	2.4e-218
AYR58264.1|23106_24036_+	hypothetical protein	NA	J9Q742	Salmonella_phage	99.0	3.8e-161
AYR58265.1|24151_25267_+	putative thymidylate synthase	NA	J9Q6J6	Salmonella_phage	98.1	7.6e-217
AYR58266.1|25268_25682_+	hypothetical protein	NA	J9Q7Z8	Salmonella_phage	97.8	4.7e-71
AYR58267.1|25678_26155_+	hypothetical protein	NA	J9Q7T1	Salmonella_phage	100.0	1.4e-90
AYR58268.1|26154_26799_+	hypothetical protein	NA	J9Q7H4	Salmonella_phage	100.0	5.2e-117
AYR58269.1|26862_27282_+	hypothetical protein	NA	J9Q743	Salmonella_phage	98.6	2.9e-68
AYR58270.1|27291_27849_+	hypothetical protein	NA	J9Q6J8	Salmonella_phage	99.5	7.0e-102
AYR58271.1|27893_28820_+	hypothetical protein	NA	J9Q7Z9	Salmonella_phage	85.4	4.1e-107
AYR58272.1|29005_29599_+	hypothetical protein	NA	J9Q7T2	Salmonella_phage	99.5	4.6e-112
AYR58273.1|29801_30032_+	hypothetical protein	NA	J9Q7H5	Salmonella_phage	100.0	2.1e-36
AYR58274.1|30617_31226_+	putative ribonuclease H	NA	J9Q745	Salmonella_phage	99.5	2.2e-117
AYR58275.1|31368_31863_+	hypothetical protein	NA	J9Q6J9	Salmonella_phage	96.3	1.9e-79
AYR58276.1|31872_32061_+	hypothetical protein	NA	J9Q800	Salmonella_phage	100.0	1.2e-26
AYR58277.1|32169_33012_+	hypothetical protein	NA	J9Q7T3	Salmonella_phage	71.1	2.1e-70
AYR58278.1|33120_33693_+	hypothetical protein	NA	J9Q7H6	Salmonella_phage	98.9	8.2e-98
AYR58279.1|33816_35520_+	putative DNA modification methylase	NA	J9Q747	Salmonella_phage	98.9	0.0e+00
AYR58280.1|35578_36268_+	hypothetical protein	NA	J9Q6K2	Salmonella_phage	98.3	6.1e-124
AYR58281.1|36264_36438_+	hypothetical protein	NA	J9Q801	Salmonella_phage	98.2	9.5e-26
AYR58282.1|36548_36920_+	hypothetical protein	NA	J9Q7T4	Salmonella_phage	100.0	3.2e-63
AYR58283.1|37011_37653_+	hypothetical protein	NA	J9Q7H7	Salmonella_phage	100.0	9.7e-116
AYR58284.1|37649_38192_+	hypothetical protein	NA	J9Q748	Salmonella_phage	93.1	2.6e-93
AYR58285.1|38203_38512_+	hypothetical protein	NA	A0A1B5FPC7	Escherichia_phage	56.9	3.0e-14
AYR58286.1|38508_38796_+	hypothetical protein	NA	A5VWB2	Enterobacteria_phage	58.8	9.9e-28
AYR58287.1|38856_39060_-	hypothetical protein	NA	J9Q802	Salmonella_phage	95.5	1.5e-30
AYR58288.1|39233_39515_+	hypothetical protein	NA	J9Q7T5	Salmonella_phage	71.6	3.2e-31
AYR58289.1|39599_39917_+	hypothetical protein	NA	J9Q750	Salmonella_phage	80.0	8.1e-47
AYR58290.1|39926_41117_+	hypothetical protein	NA	J9Q803	Salmonella_phage	54.6	5.4e-120
AYR58291.1|42553_42799_-	hypothetical protein	NA	J9Q751	Salmonella_phage	92.5	5.8e-37
AYR58292.1|42941_43157_+	hypothetical protein	NA	J9Q6K7	Salmonella_phage	95.8	4.5e-33
AYR58293.1|43167_43386_+	hypothetical protein	NA	J9Q804	Salmonella_phage	98.6	6.4e-35
AYR58294.1|43480_43795_+	hypothetical protein	NA	NA	NA	NA	NA
AYR58295.1|43871_44183_+	hypothetical protein	NA	J9Q7T7	Salmonella_phage	92.2	1.1e-45
AYR58296.1|44311_44704_+	hypothetical protein	NA	J9Q7I1	Salmonella_phage	65.4	1.7e-41
AYR58297.1|44824_45112_+	hypothetical protein	NA	J9Q753	Salmonella_phage	94.6	1.5e-47
AYR58298.1|45317_45800_+	hypothetical protein	NA	J9Q805	Salmonella_phage	96.9	5.5e-87
AYR58299.1|46431_46659_-	hypothetical protein	NA	NA	NA	NA	NA
AYR58300.1|46743_47394_-	hypothetical protein	NA	J9Q754	Salmonella_phage	100.0	1.4e-114
AYR58301.1|48028_48556_-	putative transcriptional regulator	NA	J9Q6L0	Salmonella_phage	96.6	4.1e-80
AYR58302.1|48560_48983_-	putative lipoprotein	NA	J9Q806	Salmonella_phage	85.7	8.2e-63
AYR58303.1|49042_49321_-	hypothetical protein	NA	J9Q7T9	Salmonella_phage	98.9	3.4e-41
AYR58304.1|49323_50883_-	putative helicase	NA	J9Q7I4	Salmonella_phage	99.4	5.7e-295
AYR58305.1|50965_51646_+	hypothetical protein	NA	J9Q756	Salmonella_phage	99.6	7.4e-122
AYR58306.1|51645_52314_+	hypothetical protein	NA	J9Q6L1	Salmonella_phage	99.5	1.1e-114
AYR58307.1|52310_52949_+	putative ABC transporter ATP-binding protein	NA	J9Q807	Salmonella_phage	99.1	5.5e-111
AYR58308.1|52941_53196_+	hypothetical protein	NA	J9Q7U0	Salmonella_phage	98.8	4.1e-41
AYR58309.1|53192_54092_+	hypothetical protein	NA	J9Q7I6	Salmonella_phage	99.3	4.0e-168
AYR58310.1|54101_54368_+	hypothetical protein	NA	J9Q757	Salmonella_phage	100.0	1.3e-42
AYR58311.1|54563_55205_+	DNA-binding protein	NA	J9Q6D4	Salmonella_phage	99.5	1.8e-109
AYR58312.1|55207_56464_+	hypothetical protein	NA	J9Q7Y2	Salmonella_phage	99.8	5.3e-251
AYR58313.1|56497_58072_+	hypothetical protein	NA	J9Q7R1	Salmonella_phage	99.0	3.2e-301
AYR58314.1|58094_58991_+	hypothetical protein	NA	J9Q7F4	Salmonella_phage	96.6	5.7e-146
AYR58315.1|59017_59893_+	hypothetical protein	NA	J9Q710	Salmonella_phage	100.0	3.8e-163
AYR58316.1|59967_60891_+	hypothetical protein	NA	J9Q6D6	Salmonella_phage	100.0	3.3e-157
AYR58317.1|60934_61369_+	hypothetical protein	NA	J9Q7Y3	Salmonella_phage	100.0	2.1e-74
AYR58318.1|61368_62202_+	hypothetical protein	NA	J9Q7R2	Salmonella_phage	100.0	2.6e-153
AYR58319.1|62299_62644_+	hypothetical protein	NA	J9Q7F6	Salmonella_phage	100.0	1.9e-57
AYR58320.1|62634_63108_+	hypothetical protein	NA	J9Q711	Salmonella_phage	100.0	2.3e-82
AYR58321.1|63109_63493_+	hypothetical protein	NA	J9Q6D8	Salmonella_phage	100.0	1.7e-67
AYR58322.1|63567_64314_+	hypothetical protein	NA	J9Q7Y4	Salmonella_phage	96.8	7.8e-125
AYR58323.1|64373_64691_+	hypothetical protein	NA	J9Q7R3	Salmonella_phage	98.1	6.0e-50
AYR58324.1|64771_65041_+	hypothetical protein	NA	J9Q7F7	Salmonella_phage	100.0	8.4e-37
AYR58325.1|65048_69632_+	hypothetical protein	NA	J9Q712	Salmonella_phage	92.9	0.0e+00
AYR58326.1|69673_70009_+	hypothetical protein	NA	J9Q6E1	Salmonella_phage	97.3	5.7e-59
AYR58327.1|70065_70797_+|tail	putative phage tail protein	tail	J9Q7Y5	Salmonella_phage	99.1	3.3e-136
AYR58328.1|70789_71587_+	hypothetical protein	NA	J9Q7R4	Salmonella_phage	95.8	1.2e-155
AYR58329.1|71574_72162_+|tail	putative phage tail protein	tail	J9Q7F8	Salmonella_phage	92.3	1.1e-102
AYR58330.1|72176_76565_+|tail	putative phage tail protein	tail	J9Q713	Salmonella_phage	86.7	0.0e+00
AYR58331.1|76647_79200_+	hypothetical protein	NA	A0A0A0YQM3	Citrobacter_virus	52.5	1.4e-152
AYR58332.1|79314_79638_+	hypothetical protein	NA	J9Q6E7	Salmonella_phage	97.2	2.7e-50
AYR58333.1|79624_80344_+	hypothetical protein	NA	J9Q7Y7	Salmonella_phage	95.7	1.5e-125
AYR58334.1|80412_80757_+	hypothetical protein	NA	J9Q7G2	Salmonella_phage	83.6	5.9e-27
AYR58335.1|80807_81359_-	hypothetical protein	NA	A0A2H4J5U3	uncultured_Caudovirales_phage	39.8	7.8e-29
AYR58336.1|81689_82355_+	hypothetical protein	NA	J9Q7R7	Salmonella_phage	95.0	8.0e-113
AYR58337.1|82354_82714_+	hypothetical protein	NA	J9Q7G3	Salmonella_phage	100.0	2.3e-45
AYR58338.1|82762_83518_+	hypothetical protein	NA	J9Q7Y9	Salmonella_phage	43.0	3.2e-57
AYR58339.1|83587_84643_-	hypothetical protein	NA	A0A2I7RNF6	Vibrio_phage	42.6	5.1e-61
AYR58340.1|84920_85646_+	hypothetical protein	NA	J9Q7R8	Salmonella_phage	98.3	2.4e-139
AYR58341.1|85706_87047_+	putative DNA helicase	NA	J9Q7G4	Salmonella_phage	99.6	3.8e-247
AYR58342.1|87109_88321_+	hypothetical protein	NA	J9Q720	Salmonella_phage	96.5	6.6e-214
AYR58343.1|88322_89375_-	hypothetical protein	NA	J9Q6F5	Salmonella_phage	56.7	1.9e-92
AYR58344.1|89558_90353_+	hypothetical protein	NA	J9Q7Z0	Salmonella_phage	96.2	4.9e-141
AYR58345.1|90653_90911_+	hypothetical protein	NA	J9Q7R9	Salmonella_phage	92.9	4.9e-34
AYR58346.1|90945_92268_+	DNA ligase	NA	J9Q7G5	Salmonella_phage	98.4	5.8e-256
AYR58347.1|92433_92640_+	hypothetical protein	NA	J9Q6I3	Salmonella_phage	98.5	8.1e-32
AYR58348.1|92639_92792_+	hypothetical protein	NA	J9Q7Z1	Salmonella_phage	96.0	7.6e-19
AYR58349.1|92788_93094_+	hypothetical protein	NA	J9Q7S1	Salmonella_phage	98.0	9.2e-48
