The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033683	Raoultella ornithinolytica strain YDC775_2 chromosome, complete genome	5453741	1729526	1741340	5453741	holin	Shigella_phage(20.0%)	24	NA	NA
AYW54106.1|1729526_1730813_-	DUF3596 domain-containing protein	NA	A0A0U2JGI6	Escherichia_phage	55.0	1.7e-122
AYW54107.1|1730812_1731028_-	hypothetical protein	NA	NA	NA	NA	NA
AYW54108.1|1731188_1731458_-	hypothetical protein	NA	NA	NA	NA	NA
AYW54109.1|1731435_1731831_-	hypothetical protein	NA	A0A240F4V4	Ochrobactrum_phage	54.0	1.5e-26
AYW54110.1|1731827_1732052_-	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	59.5	8.0e-17
AYW54111.1|1732057_1732276_-	hypothetical protein	NA	A0A291LBA3	Klebsiella_phage	46.8	1.3e-08
AYW54112.1|1732400_1732580_+	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA	NA
AYW54113.1|1732569_1732863_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA	NA
AYW54114.1|1733449_1733956_-	helix-turn-helix domain-containing protein	NA	A0A0R6PJG5	Moraxella_phage	54.9	2.5e-13
AYW54115.1|1734005_1734275_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54116.1|1734274_1734688_+	hypothetical protein	NA	A0A0U2RXZ9	Escherichia_phage	68.2	2.7e-42
AYW54117.1|1734702_1734957_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54118.1|1734953_1736048_+	hypothetical protein	NA	S5FM81	Shigella_phage	41.2	4.1e-21
AYW54119.1|1736060_1736354_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54120.1|1736350_1736563_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54121.1|1736773_1736980_+	hypothetical protein	NA	A0A2I7R8F9	Vibrio_phage	64.7	2.5e-12
AYW54122.1|1736976_1737636_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	75.9	4.7e-97
AYW54123.1|1737632_1738250_+	hypothetical protein	NA	H9C175	Pectobacterium_phage	62.9	3.3e-68
AYW54124.1|1738874_1739660_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54125.1|1739813_1740083_+|holin	holin	holin	K7P6H9	Enterobacteria_phage	82.6	4.2e-36
AYW57214.1|1740060_1740558_+	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	82.4	1.2e-76
AYW57215.1|1740554_1740944_+	DUF2570 domain-containing protein	NA	Q8SBD9	Shigella_phage	47.6	1.2e-23
AYW54126.1|1740831_1741086_+	Rz1 lytic protein	NA	Q8SBD8	Shigella_phage	69.1	1.9e-22
AYW54127.1|1741115_1741340_+	hypothetical protein	NA	A0A2H4J182	uncultured_Caudovirales_phage	67.6	3.7e-22
>prophage 2
CP033683	Raoultella ornithinolytica strain YDC775_2 chromosome, complete genome	5453741	2095258	2172811	5453741	portal,integrase,tail,tRNA	Enterobacteria_phage(28.57%)	74	2139631:2139648	2167405:2167422
AYW54415.1|2095258_2096410_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
AYW54416.1|2096421_2096880_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AYW54417.1|2096900_2097551_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
AYW54418.1|2097784_2099035_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
AYW54419.1|2099152_2100280_-|integrase	integrase	integrase	O21925	Phage_21	58.4	3.3e-119
AYW54420.1|2100260_2100506_-	excisionase	NA	NA	NA	NA	NA
AYW54421.1|2100558_2102697_-	exonuclease	NA	S4TNL0	Salmonella_phage	43.0	3.9e-100
AYW54422.1|2102838_2103183_-	transcriptional regulator	NA	NA	NA	NA	NA
AYW54423.1|2103225_2103420_-	DUF1482 family protein	NA	NA	NA	NA	NA
AYW54424.1|2103429_2103669_-	hypothetical protein	NA	NA	NA	NA	NA
AYW54425.1|2103908_2105333_+|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	54.2	1.3e-96
AYW54426.1|2105755_2106814_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	31.1	6.1e-14
AYW54427.1|2107169_2107862_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AYW54428.1|2107993_2108191_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54429.1|2108511_2108664_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	90.0	1.9e-17
AYW54430.1|2109039_2109840_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AYW54431.1|2110085_2111312_-	MFS transporter	NA	NA	NA	NA	NA
AYW54432.1|2112605_2113244_+	LysE family translocator	NA	NA	NA	NA	NA
AYW54433.1|2113234_2113432_-	hypothetical protein	NA	NA	NA	NA	NA
AYW54434.1|2115704_2116244_+	DUF2058 domain-containing protein	NA	NA	NA	NA	NA
AYW54435.1|2116997_2118029_-	methionine synthase	NA	NA	NA	NA	NA
AYW54436.1|2118056_2119040_-	DUF1852 domain-containing protein	NA	NA	NA	NA	NA
AYW57230.1|2119417_2120278_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AYW57231.1|2121747_2122299_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
AYW54437.1|2122449_2123202_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
AYW54438.1|2123254_2123911_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
AYW57232.1|2123913_2124636_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	44.8	5.4e-38
AYW54439.1|2124657_2125680_+	acyl-CoA--6-aminopenicillanic acid acyl-transferase	NA	NA	NA	NA	NA
AYW54440.1|2125821_2126298_-	cold shock domain-containing protein	NA	NA	NA	NA	NA
AYW54441.1|2126484_2126730_-	DUF2543 family protein	NA	NA	NA	NA	NA
AYW54442.1|2126970_2127588_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AYW54443.1|2127614_2129399_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.5	2.0e-17
AYW54444.1|2131170_2133501_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AYW54445.1|2133597_2134545_-	fec operon regulator FecR	NA	NA	NA	NA	NA
AYW57233.1|2134541_2135060_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AYW54446.1|2135850_2136765_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.8	1.7e-73
AYW54447.1|2136856_2137495_+	leucine efflux protein LeuE	NA	NA	NA	NA	NA
AYW54448.1|2137621_2137885_+	DUF2534 family protein	NA	NA	NA	NA	NA
AYW54449.1|2137927_2138053_-	hypothetical protein	NA	NA	NA	NA	NA
AYW54450.1|2138268_2138370_-	hypothetical protein	NA	NA	NA	NA	NA
AYW54451.1|2138485_2139499_-	diguanylate cyclase	NA	NA	NA	NA	NA
2139631:2139648	attL	AAAAAAAGCCCCGTCGGG	NA	NA	NA	NA
AYW54452.1|2139764_2140748_-|integrase	site-specific integrase	integrase	Q83VS6	Escherichia_phage	80.1	4.9e-151
AYW54453.1|2140863_2141163_-	XRE family transcriptional regulator	NA	Q1JS83	Enterobacteria_phage	84.8	8.7e-43
AYW54454.1|2141284_2141554_+	hypothetical protein	NA	Q1JS60	Enterobacteria_phage	86.5	9.6e-41
AYW54455.1|2141550_2141877_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54456.1|2142007_2142226_+	DUF4761 domain-containing protein	NA	A0A0M5M1I3	Salmonella_phage	47.3	1.6e-06
AYW54457.1|2142241_2142619_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54458.1|2142634_2142907_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54459.1|2142975_2143200_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54460.1|2143196_2143763_+	3'-5' exoribonuclease	NA	D4HTX2	Vibrio_phage	32.1	6.1e-13
AYW57234.1|2143771_2143999_+	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	41.0	1.9e-05
AYW54461.1|2147544_2149233_+	hypothetical protein	NA	D0UIM0	Aggregatibacter_phage	53.1	1.3e-175
AYW54462.1|2149435_2150800_-	hypothetical protein	NA	R9TRQ8	Vibrio_phage	22.3	1.8e-18
AYW54463.1|2151384_2152446_-|portal	phage portal protein	portal	A0A0A7NPT9	Enterobacteria_phage	69.0	9.1e-143
AYW54464.1|2153562_2156592_+|tail	phage tail protein I	tail	V5YTN0	Pseudomonas_phage	38.5	3.7e-24
AYW54465.1|2156588_2156804_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54466.1|2156788_2157886_+|tail	phage tail protein	tail	A0A0M3ULH6	Salmonella_phage	28.6	4.7e-09
AYW54467.1|2158118_2159849_-	deoxycytidylate deaminase	NA	NA	NA	NA	NA
AYW54468.1|2160096_2160534_-|tail	phage tail protein	tail	A0A0A7NV65	Enterobacteria_phage	67.4	8.0e-53
AYW54469.1|2160549_2163525_-|tail	phage tail tape measure protein	tail	A0A0A7NRZ9	Enterobacteria_phage	46.5	1.5e-219
AYW57235.1|2163511_2163670_-|tail	GpE family phage tail protein	tail	A0A0A7NQ96	Enterobacteria_phage	63.3	3.5e-11
AYW54470.1|2163669_2163987_-|tail	phage tail assembly protein	tail	B9A7B2	Serratia_phage	54.8	1.0e-17
AYW54471.1|2164032_2164548_-|tail	phage major tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	61.2	3.7e-57
AYW54472.1|2164547_2165720_-|tail	phage tail sheath family protein	tail	A0A0A7NV69	Enterobacteria_phage	70.0	5.5e-157
AYW54473.1|2165874_2167014_+	phage late control D family protein	NA	B9A7A9	Serratia_phage	71.0	7.2e-146
AYW54474.1|2167057_2167309_+	hypothetical protein	NA	A0A2I8TV89	Erwinia_phage	49.2	4.5e-08
AYW54475.1|2167572_2167824_+	DUF333 domain-containing protein	NA	NA	NA	NA	NA
2167405:2167422	attR	AAAAAAAGCCCCGTCGGG	NA	NA	NA	NA
AYW54476.1|2167813_2168179_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
AYW54477.1|2168165_2168675_-	DUF523 domain-containing protein	NA	NA	NA	NA	NA
AYW54478.1|2168866_2169559_+	hypothetical protein	NA	NA	NA	NA	NA
AYW54479.1|2169670_2170855_-	MFS transporter	NA	NA	NA	NA	NA
AYW54480.1|2170955_2171747_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AYW54481.1|2171730_2172177_-	DUF441 domain-containing protein	NA	NA	NA	NA	NA
AYW54482.1|2172310_2172811_-|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
>prophage 3
CP033683	Raoultella ornithinolytica strain YDC775_2 chromosome, complete genome	5453741	3600286	3608130	5453741		Enterobacteria_phage(42.86%)	8	NA	NA
AYW55637.1|3600286_3601291_+	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	29.1	5.8e-30
AYW55638.1|3601295_3601481_-	hypothetical protein	NA	NA	NA	NA	NA
AYW55639.1|3601677_3602844_-	UDP-glucose 6-dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	54.7	8.2e-113
AYW55640.1|3603019_3603574_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	56.4	2.1e-50
AYW55641.1|3603585_3604476_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	34.6	2.5e-29
AYW55642.1|3604508_3605378_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.7	1.5e-111
AYW55643.1|3605416_3606481_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.1	2.4e-103
AYW55644.1|3606723_3608130_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.4	1.1e-39
