The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	228583	285996	4708493	protease,transposase	Escherichia_phage(12.5%)	58	NA	NA
AYX18229.1|228583_229606_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.7	5.4e-201
AYX18230.1|229602_230385_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX18231.1|231466_232360_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYX18232.1|232621_233326_+	pirin family protein	NA	NA	NA	NA	NA
AYX18233.1|234262_235162_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	44.4	1.0e-49
AYX21992.1|235224_237198_+	penicillin-binding protein activator	NA	NA	NA	NA	NA
AYX18234.1|237281_237635_+	YraN family protein	NA	NA	NA	NA	NA
AYX18235.1|237905_238496_+	DnaA initiator-associating protein DiaA	NA	A0A067XQR2	Caulobacter_phage	32.0	3.2e-12
AYX18236.1|238506_239082_+	divisome-associated lipoprotein YraP	NA	NA	NA	NA	NA
AYX18237.1|239288_240014_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
AYX18238.1|240010_240664_-	isoprenoid biosynthesis protein ElbB	NA	NA	NA	NA	NA
AYX18239.1|240693_240888_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18240.1|240905_243242_-	aerobic respiration two-component sensor histidine kinase ArcB	NA	A0A1V0SGX0	Hokovirus	30.4	9.9e-41
AYX18241.1|243309_243525_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21993.1|243505_244435_-	TIGR01212 family radical SAM protein	NA	NA	NA	NA	NA
AYX18242.1|245257_249715_+	glutamate synthase large subunit	NA	NA	NA	NA	NA
AYX18243.1|249724_251143_+	glutamate synthase small subunit	NA	NA	NA	NA	NA
AYX18244.1|251583_252069_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18245.1|252221_252737_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	55.6	3.6e-28
AYX18246.1|252742_253384_-	stringent starvation protein A	NA	NA	NA	NA	NA
AYX18247.1|253563_253761_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18248.1|253757_254150_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
AYX18249.1|254164_254593_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
AYX18250.1|254906_256034_-	cell division protein ZapE	NA	NA	NA	NA	NA
AYX18251.1|256257_256662_+	DUF1043 family protein	NA	NA	NA	NA	NA
AYX18252.1|256932_258306_+|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.2	7.4e-20
AYX18253.1|258422_258881_-|transposase	IS200/IS605 family transposase IS1541B	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX21994.1|259106_260195_+|protease	serine endoprotease DegS	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	31.8	2.1e-09
AYX18254.1|260375_261638_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AYX18255.1|261791_262046_-	BolA family iron metabolism protein IbaG	NA	NA	NA	NA	NA
AYX18256.1|262192_262495_-	lipid asymmetry maintenance protein MlaB	NA	NA	NA	NA	NA
AYX18257.1|262530_263154_-	phospholipid-binding protein MlaC	NA	NA	NA	NA	NA
AYX18258.1|263166_263724_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
AYX18259.1|263728_264511_-	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA	NA
AYX18260.1|264728_265547_-	phospholipid ABC transporter ATP-binding protein MlaF	NA	G3M9Y6	Bacillus_virus	31.7	2.2e-19
AYX18261.1|265811_266786_+	calcium/sodium antiporter	NA	NA	NA	NA	NA
AYX21995.1|266896_267883_+	arabinose-5-phosphate isomerase KdsD	NA	A0A2P0VNK5	Tetraselmis_virus	30.8	6.0e-40
AYX18262.1|268131_268695_+	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	83.0	9.6e-59
AYX18263.1|268691_269255_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AYX18264.1|269238_269784_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA	NA
AYX18265.1|269790_270516_+	lipopolysaccharide ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	1.4e-22
AYX18266.1|270577_272011_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
AYX21996.1|272439_272922_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
AYX18267.1|272948_273203_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18268.1|273227_274082_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	30.0	3.2e-05
AYX18269.1|274078_274351_+	PTS phosphocarrier protein NPr	NA	NA	NA	NA	NA
AYX21997.1|274246_274498_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18270.1|274688_275624_+	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	38.5	1.5e-48
AYX18271.1|275635_276100_+	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA	NA
AYX18272.1|276237_276624_+	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
AYX18273.1|276922_277399_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18274.1|277632_278586_+	HTH-type transcriptional regulator TreR	NA	NA	NA	NA	NA
AYX18275.1|278996_280412_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA	NA
AYX18276.1|280506_282174_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
AYX21998.1|282526_282937_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA	NA
AYX18277.1|283168_283555_-	soluble cytochrome b562 2	NA	NA	NA	NA	NA
AYX18278.1|283762_284401_-	hypothetical protein	NA	A0A1B0VBK8	Salmonella_phage	49.0	5.8e-52
AYX18279.1|284655_285996_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
>prophage 2
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	375757	423373	4708493	plate,transposase	Escherichia_phage(30.77%)	40	NA	NA
AYX18349.1|375757_376780_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX18350.1|376776_377559_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX18351.1|378615_379800_+	elongation factor Tu	NA	A0A2K9L516	Tupanvirus	26.9	2.0e-13
AYX18352.1|380050_380434_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AYX18353.1|380435_380981_+	transcription termination/antitermination protein NusG	NA	A0A291AUS6	Sinorhizobium_phage	28.3	5.9e-13
AYX18354.1|381171_381600_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AYX18355.1|381603_382308_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AYX18356.1|382672_383170_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AYX18357.1|383236_383605_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AYX18358.1|383947_387976_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	29.0	1.2e-22
AYX18359.1|388104_392325_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	27.0	8.5e-67
AYX18360.1|392451_392910_-|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX18361.1|393185_393299_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18362.1|393341_394472_-	2-iminoacetate synthase ThiH	NA	NA	NA	NA	NA
AYX18363.1|394464_395280_-	thiazole synthase	NA	NA	NA	NA	NA
AYX22002.1|395281_395473_-	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
AYX18364.1|395493_396291_-	HesA/MoeB/ThiF family protein	NA	A0A1V0SAV8	Catovirus	27.8	1.6e-11
AYX22001.1|396280_396928_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
AYX18365.1|396941_398987_-	phosphomethylpyrimidine synthase	NA	NA	NA	NA	NA
AYX18366.1|399362_399872_-	sigma D regulator	NA	NA	NA	NA	NA
AYX18367.1|399968_400751_+	NAD(+) diphosphatase	NA	NA	NA	NA	NA
AYX18368.1|400843_401629_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18369.1|401747_402815_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AYX18370.1|402844_403585_+	deoxyribonuclease V	NA	NA	NA	NA	NA
AYX18371.1|403630_404221_+	DUF416 family protein	NA	NA	NA	NA	NA
AYX18372.1|404409_404685_+	DNA-binding protein HU-alpha	NA	A7KV42	Bacillus_phage	55.6	3.6e-19
AYX18373.1|404734_405388_+	DUF1481 domain-containing protein	NA	NA	NA	NA	NA
AYX18374.1|405535_406822_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
AYX18375.1|406881_408471_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	49.4	2.2e-68
AYX18376.1|408628_408859_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18377.1|408938_409124_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18378.1|414794_415893_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.2	2.2e-46
AYX22003.1|416363_416549_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18379.1|416558_417341_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX18380.1|417337_418360_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX18381.1|418373_418481_-	glutathione S-transferase	NA	NA	NA	NA	NA
AYX18382.1|419484_420003_+	Hcp1 family type VI secretion system effector	NA	NA	NA	NA	NA
AYX18383.1|420076_420520_+	lysozyme	NA	NA	NA	NA	NA
AYX18384.1|420552_422397_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AYX18385.1|422389_423373_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 3
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	775685	837169	4708493	protease,plate,transposase	Escherichia_phage(42.86%)	47	NA	NA
AYX18665.1|775685_776708_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX18666.1|776704_777487_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX18667.1|777739_778324_+	DUF4232 domain-containing protein	NA	NA	NA	NA	NA
AYX18668.1|778440_778926_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA	NA
AYX18669.1|779067_779985_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
AYX18670.1|780220_781552_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.8	1.2e-43
AYX18671.1|781622_782147_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
AYX18672.1|782246_783092_-	cell division protein FtsN	NA	NA	NA	NA	NA
AYX18673.1|783157_784186_-	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA	NA
AYX18674.1|784308_784452_-	primosome assembly protein PriA	NA	NA	NA	NA	NA
AYX18675.1|784538_786737_-	primosomal protein N'	NA	NA	NA	NA	NA
AYX18676.1|786979_787195_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
AYX18677.1|787719_788175_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18678.1|788523_788841_-	met regulon transcriptional regulator MetJ	NA	NA	NA	NA	NA
AYX18679.1|790380_792816_+	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA	NA
AYX18680.1|793048_793933_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
AYX22026.1|794110_795465_-|transposase	IS3-like element IS1661 family transposase	transposase	A0A1B1P773	Bacillus_phage	44.7	1.1e-55
AYX18681.1|795727_797161_+	MFS transporter	NA	NA	NA	NA	NA
AYX18682.1|797419_799600_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AYX18683.1|799671_801000_-	lysine 6-monooxygenase	NA	NA	NA	NA	NA
AYX18684.1|800996_802745_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AYX18685.1|802741_803692_-	N-acetyltransferase	NA	NA	NA	NA	NA
AYX18686.1|805586_806810_+	MFS transporter	NA	NA	NA	NA	NA
AYX18687.1|806757_806952_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18688.1|807099_807933_-	dioxygenase	NA	NA	NA	NA	NA
AYX18689.1|808309_809686_-	peptidase	NA	NA	NA	NA	NA
AYX18690.1|810247_810991_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AYX18691.1|810971_811622_-	acyl-homoserine-lactone synthase	NA	NA	NA	NA	NA
AYX18692.1|812796_813447_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AYX18693.1|813897_814293_+	lipoprotein	NA	NA	NA	NA	NA
AYX18694.1|814797_815169_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18695.1|816568_817069_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AYX18696.1|817111_818656_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AYX18697.1|818667_820020_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AYX18698.1|820016_820703_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AYX18699.1|820702_822439_+	OmpA family protein	NA	NA	NA	NA	NA
AYX18700.1|822442_822934_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
AYX18701.1|823351_826000_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	29.4	1.8e-91
AYX18702.1|825996_828345_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.3	3.1e-18
AYX18703.1|828359_830582_+	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
AYX18704.1|830725_831082_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18705.1|831045_831225_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18706.1|831255_831450_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18707.1|832674_833310_+	DUF2345 domain-containing protein	NA	NA	NA	NA	NA
AYX18708.1|833325_835623_+	kinase	NA	NA	NA	NA	NA
AYX22027.1|835627_836377_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18709.1|836472_837169_+|transposase	IS1 family transposase	transposase	A0A0U2RK18	Escherichia_phage	48.5	1.3e-60
>prophage 4
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	925756	940652	4708493	integrase,transposase,tRNA	Escherichia_phage(22.22%)	14	933705:933718	939793:939806
AYX18779.1|925756_926656_+	tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.7	8.5e-33
AYX18780.1|926686_927403_+	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA	NA
AYX18781.1|927409_929143_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.7	3.6e-64
AYX18782.1|929321_930419_+	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.0	5.4e-05
AYX18783.1|930429_931947_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	37.0	1.1e-85
AYX18784.1|932636_933419_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX18785.1|933415_934438_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
933705:933718	attL	TAAAAACTGTTACG	NA	NA	NA	NA
AYX18786.1|934494_935553_+|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	60.4	2.0e-113
AYX18787.1|935634_935916_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18788.1|936417_936678_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	36.0	7.4e-06
AYX18789.1|936740_937103_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AYX18790.1|937266_937563_+	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA	NA
AYX18791.1|937562_937961_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
AYX18792.1|938360_940652_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	40.5	7.2e-153
939793:939806	attR	TAAAAACTGTTACG	NA	NA	NA	NA
>prophage 5
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	1226834	1236471	4708493	protease,transposase,tRNA	Planktothrix_phage(16.67%)	9	NA	NA
AYX19056.1|1226834_1228784_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	37.7	8.8e-35
AYX19057.1|1229064_1229328_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	59.7	3.6e-16
AYX19058.1|1229513_1229720_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19059.1|1229688_1230009_+|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	42.7	8.2e-15
AYX19060.1|1230034_1232311_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.7	7.4e-166
AYX19061.1|1232603_1233062_+|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX19062.1|1233433_1233652_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AYX19063.1|1233817_1234528_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AYX19064.1|1234746_1236471_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	31.8	3.3e-17
>prophage 6
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	1276295	1323675	4708493	protease,transposase,tRNA	Escherichia_phage(25.0%)	43	NA	NA
AYX19090.1|1276295_1277318_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX19091.1|1277331_1277430_-	glutathione S-transferase	NA	NA	NA	NA	NA
AYX19092.1|1278215_1278413_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19093.1|1278650_1278860_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	50.0	3.0e-10
AYX19094.1|1279407_1279590_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19095.1|1279586_1280339_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AYX19096.1|1280437_1280641_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19097.1|1280701_1281595_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19098.1|1282367_1283153_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
AYX19099.1|1283149_1284472_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
AYX19100.1|1284452_1285181_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
AYX19101.1|1285177_1289635_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
AYX19102.1|1289678_1289861_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19103.1|1289850_1290309_+|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX19104.1|1290592_1292449_+	L,D-transpeptidase	NA	NA	NA	NA	NA
AYX19105.1|1292672_1293221_+	DUF882 domain-containing protein	NA	A0A0K1LLY2	Rhodobacter_phage	34.7	7.8e-05
AYX19106.1|1293281_1293929_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	32.3	2.2e-22
AYX19107.1|1294082_1294199_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
AYX19108.1|1294352_1295543_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AYX19109.1|1295799_1296882_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	56.5	3.2e-111
AYX19110.1|1297179_1298580_-|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.2	6.5e-80
AYX22051.1|1299078_1300284_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
AYX19111.1|1300999_1303615_+	aminopeptidase N	NA	NA	NA	NA	NA
AYX19112.1|1304250_1305261_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AYX19113.1|1305443_1305995_+	cell division protein ZapC	NA	NA	NA	NA	NA
AYX19114.1|1306020_1307133_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AYX19115.1|1307232_1309353_+	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA	NA
AYX19116.1|1309358_1311272_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	28.9	1.5e-47
AYX19117.1|1311400_1312687_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
AYX22052.1|1312700_1314326_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
AYX19118.1|1314322_1314901_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
AYX19119.1|1314949_1315090_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19120.1|1315170_1315338_+	ribosome modulation factor	NA	NA	NA	NA	NA
AYX19121.1|1315354_1315546_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19122.1|1315535_1315994_+|transposase	IS200/IS605 family transposase IS1541B	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX19123.1|1317154_1317937_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX19124.1|1317933_1318956_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX19125.1|1318969_1319344_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19126.1|1319589_1319778_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19127.1|1320043_1320562_-	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA	NA
AYX19128.1|1320630_1322403_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
AYX19129.1|1322592_1323048_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
AYX19130.1|1323216_1323675_-|transposase	IS200/IS605 family transposase IS1541B	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
>prophage 7
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	1352858	1393875	4708493	plate,transposase	Escherichia_phage(33.33%)	29	NA	NA
AYX19156.1|1352858_1353881_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX19157.1|1353877_1354660_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX19158.1|1355094_1355595_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AYX19159.1|1355637_1357188_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AYX19160.1|1357199_1358552_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AYX19161.1|1358548_1359235_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AYX19162.1|1359234_1360971_+	OmpA family protein	NA	NA	NA	NA	NA
AYX19163.1|1360974_1361466_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
AYX19164.1|1361473_1361653_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19165.1|1361853_1364496_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.6	1.6e-92
AYX19166.1|1364498_1366847_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.1	4.5e-17
AYX19167.1|1366862_1369163_+	M23 family metallopeptidase	NA	NA	NA	NA	NA
AYX19168.1|1369159_1369933_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19169.1|1370086_1370347_+	DUF2345 domain-containing protein	NA	NA	NA	NA	NA
AYX19170.1|1370362_1372546_+	M23 family metallopeptidase	NA	NA	NA	NA	NA
AYX19171.1|1372718_1373189_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22055.1|1375464_1376586_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19172.1|1376582_1380005_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
AYX19173.1|1381640_1382726_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19174.1|1382725_1383196_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19175.1|1383416_1385180_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AYX19176.1|1385143_1386229_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AYX19177.1|1386203_1386785_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AYX19178.1|1386784_1387237_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AYX19179.1|1387261_1388629_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19180.1|1388840_1389464_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19181.1|1390146_1391742_+	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	28.5	6.1e-58
AYX19182.1|1391969_1392623_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19183.1|1392666_1393875_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
>prophage 8
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	1541002	1639068	4708493	coat,tail,plate,transposase	Escherichia_phage(17.5%)	87	NA	NA
AYX19301.1|1541002_1542025_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX19302.1|1542021_1542804_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX19303.1|1543108_1544224_-	porin OmpF2	NA	Q1MVN1	Enterobacteria_phage	54.5	2.1e-110
AYX19304.1|1544493_1546674_+	ATP-dependent DNA helicase DinG	NA	A0A127AW80	Bacillus_phage	26.3	1.1e-44
AYX19305.1|1546741_1548184_-	catalase	NA	A0A2K9L0T1	Tupanvirus	38.8	4.9e-99
AYX22061.1|1548556_1549084_+	porin	NA	NA	NA	NA	NA
AYX19306.1|1549340_1550549_-	tyrosine transporter TyrP	NA	NA	NA	NA	NA
AYX19307.1|1550822_1551074_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19308.1|1551167_1552361_+	nicotinamide mononucleotide deamidase-related protein YfaY	NA	NA	NA	NA	NA
AYX19309.1|1552418_1552928_-	ecotin	NA	NA	NA	NA	NA
AYX19310.1|1552962_1553220_-	2Fe-2S ferredoxin-like protein	NA	G9IAA2	Pseudomonas_phage	54.9	4.0e-20
AYX19311.1|1553223_1554354_-	ribonucleotide-diphosphate reductase subunit beta	NA	G9IAA3	Pseudomonas_phage	78.6	7.6e-172
AYX19312.1|1554516_1556805_-	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	64.9	1.1e-286
AYX19313.1|1557298_1558027_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
AYX19314.1|1558288_1560964_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	NA	G3M9Z5	Bacillus_virus	34.4	4.0e-102
AYX19315.1|1561151_1564025_+	two-component system sensor histidine kinase RcsC	NA	A0A1V0SGX0	Hokovirus	28.3	3.8e-42
AYX19316.1|1564092_1564746_-	transcriptional regulator RcsB	NA	NA	NA	NA	NA
AYX19317.1|1564748_1565321_-	histidine phosphotransferase	NA	NA	NA	NA	NA
AYX19318.1|1565488_1567441_-	phosphotransferase RcsD	NA	NA	NA	NA	NA
AYX19319.1|1567464_1568619_-	MFS transporter	NA	NA	NA	NA	NA
AYX19320.1|1569721_1570837_+	porin	NA	Q1MVN1	Enterobacteria_phage	57.6	9.6e-111
AYX19321.1|1570851_1571049_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19322.1|1572267_1573434_-	D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH	NA	NA	NA	NA	NA
AYX19323.1|1573708_1575235_-	MFS transporter	NA	NA	NA	NA	NA
AYX19324.1|1575611_1576640_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AYX19325.1|1576713_1578501_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.5	4.0e-10
AYX19326.1|1578600_1578783_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19327.1|1578907_1579843_-	omptin family outer membrane beta-barrel protein PcoA	NA	NA	NA	NA	NA
AYX19328.1|1580014_1580251_-	DinI family protein	NA	K7PKR6	Enterobacteria_phage	63.8	4.8e-20
AYX19329.1|1580456_1581179_-	LexA family transcriptional regulator	NA	F1C599	Cronobacter_phage	51.9	2.2e-63
AYX19330.1|1581141_1581354_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19331.1|1581452_1581932_+	antitermination protein Q	NA	S5M7R9	Escherichia_phage	61.0	2.3e-37
AYX19332.1|1582133_1583447_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	46.0	1.7e-90
AYX19333.1|1583443_1584073_+	aldolase	NA	A0A077SK32	Escherichia_phage	56.6	2.2e-48
AYX19334.1|1584152_1584968_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
AYX22062.1|1584985_1585738_+	hydroxypyruvate isomerase	NA	NA	NA	NA	NA
AYX19335.1|1586368_1586659_+	hypothetical protein	NA	H6WRZ3	Salmonella_phage	46.3	7.7e-12
AYX19336.1|1586704_1587322_+	ATP-binding protein	NA	NA	NA	NA	NA
AYX19337.1|1587326_1587521_+	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	60.4	3.5e-08
AYX19338.1|1587517_1589026_+|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	44.2	2.4e-104
AYX19339.1|1589047_1589416_+|tail	phage tail protein	tail	NA	NA	NA	NA
AYX19340.1|1589417_1589717_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
AYX19341.1|1589837_1591331_+|coat	coat protein	coat	NA	NA	NA	NA
AYX19342.1|1591597_1593004_+	hypothetical protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
AYX19343.1|1593000_1594056_+|tail	phage tail protein	tail	M1PVV2	Vibrio_phage	27.2	1.3e-37
AYX19344.1|1594071_1594668_+|plate	baseplate assembly protein	plate	NA	NA	NA	NA
AYX19345.1|1594664_1595120_+	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
AYX19346.1|1595123_1596260_+|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	30.5	4.5e-31
AYX19347.1|1596256_1596517_+	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
AYX19348.1|1596513_1596861_+	DUF2313 domain-containing protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	41.3	6.4e-21
AYX19349.1|1596957_1597737_+|tail	tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	52.4	7.1e-52
AYX19350.1|1598034_1598775_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AYX19351.1|1599065_1600502_+	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
AYX19352.1|1600627_1600990_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19353.1|1601689_1602178_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19354.1|1602580_1603603_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.7	1.2e-200
AYX19355.1|1603599_1604382_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX19356.1|1605482_1605695_-	hypothetical protein	NA	A0A1W6JPG0	Morganella_phage	69.2	1.3e-08
AYX19357.1|1605654_1606038_-	hypothetical protein	NA	A0A1W6JPG0	Morganella_phage	66.7	7.8e-36
AYX19358.1|1606268_1608065_-	DUF3413 domain-containing protein	NA	NA	NA	NA	NA
AYX19359.1|1608092_1608320_-	DUF1414 domain-containing protein	NA	NA	NA	NA	NA
AYX19360.1|1608497_1609502_+	nucleoid-associated protein	NA	A0A1V0E8C0	Vibrio_phage	47.7	3.1e-84
AYX19361.1|1609702_1610161_+|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX19362.1|1610299_1610584_-	50S ribosomal protein L25	NA	NA	NA	NA	NA
AYX19363.1|1610745_1612503_-	DEAD/DEAH box helicase	NA	M4Q3N1	Vibrio_phage	42.4	2.3e-98
AYX19364.1|1613016_1613724_+	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA	NA
AYX19365.1|1613827_1615027_+	Bcr/CflA family drug resistance efflux transporter	NA	S4TR35	Salmonella_phage	25.1	1.3e-23
AYX19366.1|1615993_1616338_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19367.1|1616398_1617991_-	microcin C ABC transporter ATP-binding protein YejF	NA	G9BWD6	Planktothrix_phage	32.8	1.3e-20
AYX19368.1|1617992_1619021_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AYX19369.1|1619020_1620121_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA	NA
AYX19370.1|1620130_1621939_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYX19371.1|1622020_1623538_-	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA	NA
AYX19372.1|1624188_1624773_-	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	NA	A0A1V0DZX6	Clostridioides_phage	39.8	2.8e-13
AYX19373.1|1625214_1625916_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AYX19374.1|1625974_1626958_-	GTP-binding protein	NA	NA	NA	NA	NA
AYX19375.1|1627273_1627600_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
AYX19376.1|1627765_1628509_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AYX19377.1|1628652_1630125_-	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	32.2	7.1e-45
AYX19378.1|1630709_1631903_+	mannonate dehydratase	NA	NA	NA	NA	NA
AYX22063.1|1632042_1632615_-	elongation factor P-like protein YeiP	NA	NA	NA	NA	NA
AYX19379.1|1632718_1633963_-	tryptophan permease	NA	NA	NA	NA	NA
AYX19380.1|1634337_1634592_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
AYX19381.1|1634660_1635476_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.6	8.8e-13
AYX19382.1|1635486_1636452_-	C-terminal binding protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	30.3	5.2e-28
AYX19383.1|1636448_1637591_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AYX19384.1|1637713_1639068_-|transposase	IS3-like element IS1661 family transposase	transposase	A0A1B1P773	Bacillus_phage	44.7	1.1e-55
>prophage 9
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	1676738	1719549	4708493	protease,holin,transposase	Planktothrix_phage(16.67%)	42	NA	NA
AYX19415.1|1676738_1677761_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX22065.1|1677774_1677891_-	chemotaxis protein	NA	NA	NA	NA	NA
AYX19416.1|1678126_1678879_-	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
AYX19417.1|1679225_1679561_-	phosphate-starvation-inducible protein PsiF	NA	NA	NA	NA	NA
AYX19418.1|1679853_1680750_-	galactose-1-epimerase	NA	NA	NA	NA	NA
AYX19419.1|1680770_1680923_-	aldose epimerase	NA	NA	NA	NA	NA
AYX19420.1|1680916_1682068_-	galactokinase	NA	NA	NA	NA	NA
AYX19421.1|1682064_1683117_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
AYX19422.1|1683126_1684143_-	UDP-glucose 4-epimerase	NA	A0A2K9L1R4	Tupanvirus	44.8	3.0e-79
AYX19423.1|1684502_1685321_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AYX19424.1|1685537_1687028_-	molybdate ABC transporter ATP-binding protein ModF	NA	A0A1M7XV31	Cedratvirus	26.8	2.8e-12
AYX19425.1|1687137_1687929_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA	NA
AYX19426.1|1688194_1688347_+	multidrug efflux pump-associated protein, AcrZ family	NA	NA	NA	NA	NA
AYX19427.1|1688581_1689361_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYX19428.1|1689360_1690056_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AYX19429.1|1690049_1691129_+	molybdenum import ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	35.1	1.4e-21
AYX19430.1|1691184_1692006_-	pyridoxal phosphatase	NA	NA	NA	NA	NA
AYX19431.1|1692296_1693301_+	6-phosphogluconolactonase	NA	NA	NA	NA	NA
AYX19432.1|1693485_1694766_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	32.1	2.4e-17
AYX19433.1|1694864_1695902_+	biotin synthase	NA	NA	NA	NA	NA
AYX19434.1|1695901_1697053_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AYX19435.1|1697036_1697840_+	malonyl-[acyl-carrier protein] O-methyltransferase BioC	NA	NA	NA	NA	NA
AYX19436.1|1697832_1698555_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA	NA
AYX19437.1|1698706_1699417_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	25.3	3.5e-13
AYX19438.1|1700506_1702522_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
AYX19439.1|1702813_1703059_+	DNA-binding protein VF530	NA	NA	NA	NA	NA
AYX19440.1|1703189_1704113_-	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	NA	A1IMD5	Streptococcus_phage	27.8	3.7e-23
AYX19441.1|1704644_1705625_+	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA	NA
AYX19442.1|1705725_1706205_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AYX19443.1|1706201_1706447_+	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA	NA
AYX19444.1|1706446_1706902_+	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA	NA
AYX19445.1|1707044_1707755_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
AYX19446.1|1707989_1708448_+|transposase	IS200/IS605 family transposase IS1541B	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX19447.1|1708676_1710380_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	31.5	9.4e-57
AYX19448.1|1710402_1711875_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
AYX19449.1|1711932_1712529_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
AYX19450.1|1712893_1714942_+|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	28.5	1.4e-19
AYX19451.1|1715173_1716067_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYX19452.1|1716104_1716986_-	DMT family transporter	NA	NA	NA	NA	NA
AYX19453.1|1717298_1718162_+	xanthosine phosphorylase	NA	Q5YBA4	Grouper_iridovirus	40.7	2.3e-51
AYX19454.1|1718300_1719101_+	MFS transporter	NA	NA	NA	NA	NA
AYX19455.1|1719090_1719549_+|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
>prophage 10
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	1843708	1890516	4708493	integrase,tail,plate,transposase	Enterobacterial_phage(20.0%)	53	1860098:1860112	1893739:1893753
AYX19573.1|1843708_1843876_+|tail	phage tail protein	tail	K7PGV2	Enterobacterial_phage	71.2	1.0e-16
AYX19574.1|1844026_1844206_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19575.1|1844216_1844693_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
AYX19576.1|1844878_1845490_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
AYX19577.1|1845650_1846556_-	chemotaxis protein	NA	NA	NA	NA	NA
AYX19578.1|1846692_1848606_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
AYX19579.1|1848959_1849835_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AYX19580.1|1849841_1850081_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19581.1|1850135_1850498_-	flagellar protein FliT	NA	NA	NA	NA	NA
AYX19582.1|1850508_1850907_-	flagella export chaperone FliS	NA	NA	NA	NA	NA
AYX19583.1|1850917_1852318_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
AYX19584.1|1852614_1853724_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
AYX19585.1|1854070_1854793_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AYX19586.1|1855014_1855524_+	flagellar regulatory protein FliZ	NA	NA	NA	NA	NA
AYX19587.1|1855812_1856805_+	D-cysteine desulfhydrase	NA	NA	NA	NA	NA
AYX19588.1|1856928_1857729_+	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYX19589.1|1857728_1858391_+	cystine ABC transporter permease	NA	NA	NA	NA	NA
AYX19590.1|1858393_1859155_+	L-cystine ABC transporter ATP-binding protein YecC	NA	G9BWD6	Planktothrix_phage	40.5	6.1e-32
AYX19591.1|1859446_1859785_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AYX19592.1|1859818_1860154_-	transcriptional regulator	NA	NA	NA	NA	NA
1860098:1860112	attL	TTTTTTATCAGCCAT	NA	NA	NA	NA
AYX19593.1|1860606_1861389_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX19594.1|1861385_1862408_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX19595.1|1862576_1866548_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AYX19596.1|1866892_1867090_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19597.1|1867119_1868604_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
AYX19598.1|1868936_1869785_+	ferrous iron permease EfeU	NA	NA	NA	NA	NA
AYX19599.1|1869814_1870945_+	iron uptake system protein EfeO	NA	NA	NA	NA	NA
AYX19600.1|1870955_1872260_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA	NA
AYX19601.1|1872345_1872945_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA	NA
AYX19602.1|1873338_1874517_+	N-acetylneuraminate epimerase	NA	NA	NA	NA	NA
AYX19603.1|1874642_1876067_-	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA	NA
AYX19604.1|1877181_1877733_+	attachment invasion locus protein	NA	A0A1B0VBR9	Salmonella_phage	35.0	1.4e-22
AYX19605.1|1877771_1877954_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19606.1|1878072_1878327_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19607.1|1878354_1878696_-	GlpM family protein	NA	NA	NA	NA	NA
AYX19608.1|1878823_1879048_-	DUF2594 family protein	NA	NA	NA	NA	NA
AYX19609.1|1879710_1880367_+	two-component system response regulator UvrY	NA	NA	NA	NA	NA
AYX19610.1|1880338_1882192_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
AYX19611.1|1882250_1882799_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AYX19612.1|1883381_1883606_-|integrase	integrase	integrase	K7PLZ2	Enterobacterial_phage	76.8	1.5e-18
AYX19613.1|1883538_1884054_-|integrase	integrase	integrase	H9C152	Pectobacterium_phage	66.9	6.1e-60
AYX19614.1|1884164_1884392_+	DNA helicase	NA	A0A192Y673	Salmonella_phage	57.7	2.1e-12
AYX19615.1|1884760_1884907_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19616.1|1885151_1885325_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19617.1|1885516_1885699_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19618.1|1885915_1886260_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AYX19619.1|1886479_1887993_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AYX22075.1|1888345_1888600_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19620.1|1888604_1888958_-	DUF2778 domain-containing protein	NA	NA	NA	NA	NA
AYX19621.1|1888906_1889122_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19622.1|1889556_1889844_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19623.1|1889860_1890160_-	lysozyme	NA	A0A218M4K8	Erwinia_phage	64.9	2.6e-23
AYX19624.1|1890156_1890516_-|plate	phage baseplate assembly protein V	plate	F1BUP5	Erwinia_phage	62.5	8.9e-18
1893739:1893753	attR	TTTTTTATCAGCCAT	NA	NA	NA	NA
>prophage 11
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	2092229	2208858	4708493	integrase,tail,transposase,tRNA	Escherichia_phage(16.33%)	119	2104594:2104653	2147068:2147787
AYX19778.1|2092229_2093960_-|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L6Z2	Tupanvirus	34.2	3.8e-90
AYX19779.1|2094590_2095166_+	VOC family protein	NA	NA	NA	NA	NA
AYX19780.1|2095397_2096162_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
AYX19781.1|2096354_2097326_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
AYX19782.1|2097322_2098126_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	NA	NA	NA	NA
AYX19783.1|2098316_2098712_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19784.1|2098891_2099707_-	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	68.5	2.9e-48
AYX19785.1|2100764_2102561_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	27.3	2.8e-11
AYX19786.1|2102560_2103004_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
AYX19787.1|2103061_2103805_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AYX19788.1|2104013_2104535_+	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	32.4	6.5e-09
AYX19789.1|2104567_2104753_+	hypothetical protein	NA	NA	NA	NA	NA
2104594:2104653	attL	TTTTTTGTGCCCAGAAAACCCCCAGCTAGGCTGGGGGTTCAGTAAAGCTTTCAGCTTTGG	NA	NA	NA	NA
AYX19790.1|2104742_2105201_+|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX19791.1|2105290_2105449_+	tat protein	NA	NA	NA	NA	NA
AYX19792.1|2105528_2106143_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AYX19793.1|2106304_2107309_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	27.8	4.7e-08
AYX19794.1|2107363_2108149_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
AYX22082.1|2108145_2108904_-	zinc ABC transporter ATP-binding protein ZnuC	NA	G3M9Y6	Bacillus_virus	30.3	1.2e-16
AYX19795.1|2108979_2109936_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA	NA
AYX19796.1|2109956_2111273_+	murein DD-endopeptidase MepM	NA	G3MBP9	Bacillus_virus	44.5	2.4e-15
AYX19797.1|2111539_2112502_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA	NA
AYX19798.1|2112528_2112693_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
AYX19799.1|2112846_2114289_-	pyruvate kinase	NA	NA	NA	NA	NA
AYX22083.1|2114618_2115488_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AYX19800.1|2115840_2117325_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	36.6	1.2e-79
AYX19801.1|2117368_2117560_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19802.1|2117566_2118208_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
AYX19803.1|2118901_2119366_+	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA	NA
AYX19804.1|2119352_2119682_+	spermidine export protein MdtI	NA	NA	NA	NA	NA
AYX19805.1|2119813_2120158_-	RidA family protein	NA	NA	NA	NA	NA
AYX19806.1|2120288_2122193_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	32.6	4.5e-92
AYX22084.1|2122264_2122963_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
AYX22085.1|2123117_2123705_+	Slp family lipoprotein	NA	NA	NA	NA	NA
AYX19807.1|2123705_2123813_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
AYX19808.1|2124347_2126036_+	long-chain-fatty-acid--CoA ligase FadD	NA	A0A2H4PQM9	Staphylococcus_phage	28.9	3.0e-31
AYX22086.1|2126195_2127317_+	ribonuclease D	NA	NA	NA	NA	NA
AYX19809.1|2127553_2127823_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
AYX19810.1|2127826_2128639_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
AYX19811.1|2128663_2129350_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
AYX19812.1|2129775_2130027_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19813.1|2130070_2130343_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19814.1|2130483_2131569_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
AYX19815.1|2131639_2132296_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
AYX19816.1|2132398_2132845_+	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
AYX19817.1|2132871_2134110_-|integrase	site-specific integrase	integrase	Q20GI2	Phage_258-320	53.3	2.3e-121
AYX19818.1|2134179_2135202_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX19819.1|2135198_2135981_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX19820.1|2136095_2137208_+	hypothetical protein	NA	I6PD76	Cronobacter_phage	58.2	6.0e-121
AYX19821.1|2137329_2138103_+	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	62.3	2.8e-69
AYX19822.1|2138116_2139322_+	hypothetical protein	NA	A0A1B0VMF8	Pseudomonas_phage	79.2	1.8e-142
AYX19823.1|2139321_2139852_+	hypothetical protein	NA	G8C7P9	Escherichia_phage	46.1	9.1e-27
AYX19824.1|2139848_2140103_+	hypothetical protein	NA	J9Q7U0	Salmonella_phage	53.1	2.2e-18
AYX19825.1|2140104_2140455_+	hypothetical protein	NA	I6PD77	Cronobacter_phage	56.0	6.9e-31
AYX19826.1|2140456_2141041_+	hypothetical protein	NA	G8C7Q1	Escherichia_phage	52.1	3.6e-48
AYX19827.1|2141037_2141445_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19828.1|2141510_2142431_+|tail	phage tail protein	tail	I6PBN6	Cronobacter_phage	49.1	4.4e-61
AYX19829.1|2142443_2142755_+	hypothetical protein	NA	I6PDG2	Cronobacter_phage	58.3	1.4e-30
AYX19830.1|2142802_2143063_+	hypothetical protein	NA	A0A0S2SY90	Pseudomonas_phage	50.0	3.7e-13
AYX19831.1|2143063_2146567_+|tail	phage tail tape measure protein	tail	K7PMB9	Enterobacterial_phage	33.2	5.2e-118
AYX19832.1|2146569_2146911_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	50.0	1.7e-21
AYX19833.1|2147216_2147675_+|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX19834.1|2147795_2148548_+|tail	phage minor tail protein L	tail	A0A1W6JNX9	Morganella_phage	67.7	9.4e-102
2147068:2147787	attR	TTTTTTGTGCCCAGAAAACCCCCAGCTAGGCTGGGGGTTCAGTAAAGCTTTCAGCTTTGGGTCAGTTATAAAAACCCCTTTTGATTTGTTAAAACAGTTTGCGGTCTGGCAACTGCAAATGTTCAACAAGAAATCAAAAGGGGGTCCCAATGAGGGATGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCATATAGTTTTTGCGCCGAAGTACCGAAGGCAGGTGTTCTACAGGGAAAAACGCAGAGCGATTGGCAGTATTTTAAGAAAACTGTGCGAATGGAAAAACGTGAATATCCTGGAAGCAGAATACTGTGTGGATCACATCCATATGCTTCTGGAGATCCCGCCCAAGATGAGTGTCTCGGGATTTATGGGGTACCTGAAGGGAAAGAGCAGTCTGATGCTTTATGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTGTCGAGGGTATTACGTTGATACGGTAGGGAAAAACACGGCCAGGATACAAGAATACATAAAGCACCAATTGGAAGAGGATAAAATGGGTGAGCAACTCTCGATCCCGTATCCCGGTAGCCCGTTTACGGGCCGTAAGTAATCCATAGATGCAAATGTCAGATCGCGATGCGCCTGTTAGGGCGCGGCTGGTAACAGAGCCTTATAGGCGCATATGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTATG	NA	NA	NA	NA
AYX19835.1|2148550_2149261_+	peptidase P60	NA	K7P6F5	Enterobacteria_phage	76.8	1.3e-108
AYX19836.1|2149521_2150154_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19837.1|2150232_2150664_-	Arc family DNA-binding protein	NA	G9L6D6	Escherichia_phage	58.4	2.5e-30
AYX19838.1|2150787_2150955_+	Arc family DNA binding domain-containing protein	NA	G9L6D7	Escherichia_phage	61.8	5.2e-13
AYX19839.1|2150941_2152036_+	hypothetical protein	NA	A0A2H4J0P1	uncultured_Caudovirales_phage	31.9	2.6e-36
AYX19840.1|2152134_2152686_+	zinc ribbon domain-containing protein	NA	S4TR42	Salmonella_phage	58.0	9.5e-27
AYX19841.1|2152693_2153044_+	hypothetical protein	NA	K7PLP0	Enterobacteria_phage	33.6	9.3e-12
AYX19842.1|2153099_2153720_+|tail	tail assembly protein	tail	K7PGY0	Enterobacteria_phage	57.0	3.2e-55
AYX22087.1|2153894_2154116_-	hypothetical protein	NA	NA	NA	NA	NA
AYX22088.1|2154118_2154298_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19843.1|2154291_2157495_+	host specificity protein J	NA	F1C571	Cronobacter_phage	60.5	0.0e+00
AYX19844.1|2157494_2158493_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19845.1|2158509_2159427_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22089.1|2159488_2159857_+|tail	phage tail protein	tail	B6SCW7	Bacteriophage	42.0	5.0e-08
AYX19846.1|2159853_2160009_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19847.1|2160077_2161286_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
AYX19848.1|2161590_2162763_-	MFS transporter	NA	NA	NA	NA	NA
AYX19849.1|2162766_2163966_-	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.6	2.4e-38
AYX19850.1|2163982_2164723_-	hypothetical protein	NA	NA	NA	NA	NA
AYX19851.1|2165814_2166171_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22090.1|2166587_2167118_-	disulfide bond formation protein DsbB	NA	NA	NA	NA	NA
AYX19852.1|2167353_2168928_-	sodium/proton antiporter NhaB	NA	NA	NA	NA	NA
AYX22091.1|2168999_2169224_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19853.1|2169171_2169891_+	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA	NA
AYX19854.1|2170108_2171644_-	SpoVR family protein	NA	NA	NA	NA	NA
AYX19855.1|2172108_2173413_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AYX19856.1|2173428_2174631_-	Bcr/CflA family drug resistance efflux transporter	NA	S4TR35	Salmonella_phage	29.1	7.6e-29
AYX19857.1|2174895_2175765_-	pirin family protein	NA	NA	NA	NA	NA
AYX19858.1|2175962_2176868_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYX19859.1|2176902_2178021_-	DMT family transporter	NA	NA	NA	NA	NA
AYX19860.1|2178128_2179403_-	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	37.1	1.5e-11
AYX19861.1|2179552_2181487_-	PrkA family serine protein kinase	NA	NA	NA	NA	NA
AYX19862.1|2181534_2181747_+	hypothetical protein	NA	NA	NA	NA	NA
AYX19863.1|2181909_2182680_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
AYX19864.1|2182752_2183628_-	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA	NA
AYX19865.1|2183941_2184946_-	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AYX19866.1|2185284_2185698_+	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA	NA
AYX22092.1|2185768_2186041_+	DUF1315 family protein	NA	NA	NA	NA	NA
AYX19867.1|2186174_2186822_-	bifunctional nicotinamidase/pyrazinamidase	NA	A0A2K9L6K4	Tupanvirus	33.0	1.8e-21
AYX19868.1|2186836_2187853_-	L-asparaginase 1	NA	NA	NA	NA	NA
AYX19869.1|2187969_2189820_-	signal peptide peptidase SppA	NA	NA	NA	NA	NA
AYX19870.1|2189982_2190534_+	NAD(P)H nitroreductase	NA	NA	NA	NA	NA
AYX19871.1|2190758_2191805_+	selenide, water dikinase SelD	NA	NA	NA	NA	NA
AYX19872.1|2191863_2193792_+	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	30.4	4.2e-37
AYX19873.1|2193788_2194079_+	DUF1496 domain-containing protein	NA	NA	NA	NA	NA
AYX19874.1|2194091_2194478_-	pyrimidine (deoxy)nucleoside triphosphate diphosphatase	NA	NA	NA	NA	NA
AYX19875.1|2194575_2195382_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
AYX19876.1|2196191_2197052_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYX19877.1|2197923_2199132_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
AYX19878.1|2199094_2199964_-	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	37.3	5.5e-13
AYX19879.1|2200047_2200512_-	YchJ family protein	NA	NA	NA	NA	NA
AYX19880.1|2201845_2202862_+	two-component system response regulator RssB	NA	NA	NA	NA	NA
AYX19881.1|2203168_2204515_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	38.3	1.9e-81
AYX19882.1|2204949_2205348_-	DNA-binding transcriptional regulator H-NS	NA	NA	NA	NA	NA
AYX19883.1|2206097_2206688_+	thymidine kinase	NA	A0A1Z1LYD5	Serratia_phage	55.8	1.5e-54
AYX19884.1|2207056_2207839_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX19885.1|2207835_2208858_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
>prophage 12
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	2474290	2530409	4708493	coat,protease,transposase,tRNA	Tupanvirus(15.38%)	54	NA	NA
AYX20111.1|2474290_2476678_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AYX20112.1|2476691_2477675_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	38.5	7.6e-35
AYX22112.1|2477991_2478072_-	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
AYX20113.1|2478173_2478530_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AYX20114.1|2478567_2478765_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AYX20115.1|2478861_2479413_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.7	2.6e-16
AYX20116.1|2479416_2481345_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.1	1.1e-127
AYX20117.1|2481735_2481948_+	KTSC domain-containing protein	NA	A0A0K1LMB5	Caulobacter_phage	42.0	9.9e-09
AYX20118.1|2482257_2482635_+	hypothetical protein	NA	NA	NA	NA	NA
AYX20119.1|2482706_2482991_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20120.1|2483275_2483959_+	MarC family NAAT transporter	NA	NA	NA	NA	NA
AYX20121.1|2484080_2484743_-	lytic transglycosylase	NA	NA	NA	NA	NA
AYX20122.1|2484954_2485923_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYX20123.1|2485919_2486810_+	manganese/iron ABC transporter ATP-binding protein	NA	A0A1V0SKJ1	Klosneuvirus	27.5	2.9e-09
AYX20124.1|2486809_2487694_+	metal ABC transporter permease	NA	NA	NA	NA	NA
AYX20125.1|2487690_2488584_+	metal ABC transporter permease	NA	NA	NA	NA	NA
AYX20126.1|2488651_2488864_+	hypothetical protein	NA	NA	NA	NA	NA
AYX20127.1|2488888_2489764_+	fructosamine kinase family protein	NA	NA	NA	NA	NA
AYX20128.1|2489892_2490447_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20129.1|2490857_2491523_+	hexitol phosphatase HxpB	NA	NA	NA	NA	NA
AYX20130.1|2491773_2492982_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
AYX20131.1|2493029_2493380_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AYX20132.1|2493715_2494552_+	5-keto-4-deoxyuronate isomerase	NA	NA	NA	NA	NA
AYX20133.1|2494643_2495405_+	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.9	3.1e-20
AYX20134.1|2495740_2496280_+	exopolygalacturonate lyase	NA	NA	NA	NA	NA
AYX20135.1|2496289_2497072_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX20136.1|2497068_2498091_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX22113.1|2498104_2498182_-	glutathione S-transferase	NA	NA	NA	NA	NA
AYX20137.1|2498149_2499367_+	exopolygalacturonate lyase	NA	NA	NA	NA	NA
AYX20138.1|2499407_2500298_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AYX20139.1|2500290_2501211_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AYX20140.1|2501224_2502352_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	26.5	1.6e-12
AYX20141.1|2502367_2503660_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYX20142.1|2503957_2504668_+	porin	NA	NA	NA	NA	NA
AYX20143.1|2505147_2505696_+	metal-dependent hydrolase	NA	A0A127AVX7	Bacillus_phage	32.9	4.0e-09
AYX20144.1|2505893_2507291_+	L-cystine transporter	NA	NA	NA	NA	NA
AYX20145.1|2507505_2508357_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	28.8	1.3e-11
AYX20146.1|2508741_2509533_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA	NA
AYX20147.1|2509719_2510886_-	oligogalacturonate lyase	NA	NA	NA	NA	NA
AYX20148.1|2511212_2512580_+	MFS transporter	NA	NA	NA	NA	NA
AYX20149.1|2512633_2513437_-	molecular chaperone	NA	NA	NA	NA	NA
AYX20150.1|2514592_2517205_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
AYX20151.1|2517286_2518066_-	fimbrial chaperone	NA	NA	NA	NA	NA
AYX20152.1|2518218_2518761_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
AYX20153.1|2519294_2519483_+	hypothetical protein	NA	NA	NA	NA	NA
AYX20154.1|2519418_2520300_-|protease	protease HtpX	protease	NA	NA	NA	NA
AYX20155.1|2520773_2522846_-	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	34.8	4.0e-86
AYX20156.1|2522865_2523579_-	RNA chaperone ProQ	NA	NA	NA	NA	NA
AYX20157.1|2523674_2524172_-	GAF domain-containing protein	NA	NA	NA	NA	NA
AYX20158.1|2524298_2525642_+	paraquat-inducible protein A	NA	NA	NA	NA	NA
AYX20159.1|2525619_2528262_+	PqiB family protein	NA	NA	NA	NA	NA
AYX20160.1|2528740_2529295_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
AYX20161.1|2529300_2529831_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
AYX20162.1|2529851_2530409_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
>prophage 13
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	2604367	2665245	4708493	transposase,tRNA	uncultured_virus(21.43%)	57	NA	NA
AYX22115.1|2604367_2605483_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
AYX20220.1|2605540_2606167_+	lysogenization regulator HflD	NA	NA	NA	NA	NA
AYX20221.1|2606227_2607598_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	45.8	2.0e-110
AYX20222.1|2607785_2608409_+	lipoprotein	NA	NA	NA	NA	NA
AYX20223.1|2608619_2609291_+	two-component system response regulator PhoP	NA	NA	NA	NA	NA
AYX20224.1|2609296_2610751_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
AYX20225.1|2610834_2611956_+	cupin domain-containing protein	NA	NA	NA	NA	NA
AYX20226.1|2612188_2613424_-	peptidase T	NA	NA	NA	NA	NA
AYX20227.1|2613753_2614590_-	NAD-dependent deacylase	NA	A0A2I7S9Y2	Vibrio_phage	34.0	2.6e-20
AYX20228.1|2614638_2614812_-	ROK family protein	NA	NA	NA	NA	NA
AYX20229.1|2614783_2615554_-	N-acetylglucosamine kinase	NA	NA	NA	NA	NA
AYX20230.1|2615572_2616820_-	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA	NA
AYX20231.1|2616819_2617524_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	43.3	1.4e-35
AYX20232.1|2617516_2618719_-	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA	NA
AYX20233.1|2618988_2622435_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
AYX20234.1|2622673_2623213_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AYX20235.1|2623542_2624751_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
AYX20236.1|2624846_2625260_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20237.1|2625267_2625837_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20238.1|2626374_2627679_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AYX20239.1|2628053_2628596_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AYX20240.1|2628723_2629755_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
AYX22116.1|2629825_2630632_-	thiamine kinase	NA	NA	NA	NA	NA
AYX20241.1|2630672_2631248_-	penicillin-binding protein activator LpoB	NA	NA	NA	NA	NA
AYX20242.1|2631288_2631678_-	DUF1425 domain-containing protein	NA	NA	NA	NA	NA
AYX20243.1|2631712_2632066_-	purine nucleoside phosphoramidase	NA	NA	NA	NA	NA
AYX20244.1|2632239_2633058_-	shikimate 5-dehydrogenase	NA	NA	NA	NA	NA
AYX20245.1|2633680_2634463_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX20246.1|2635494_2635917_-|transposase	IS200/IS605 family transposase	transposase	I4AZI8	Saccharomonospora_phage	30.2	7.8e-13
AYX20247.1|2635906_2636107_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20248.1|2636106_2637540_-	PTS glucose transporter subunit IIBC	NA	NA	NA	NA	NA
AYX20249.1|2637845_2638655_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
AYX20250.1|2638669_2639692_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AYX20251.1|2639691_2640330_-	dTMP kinase	NA	Q2Z0N0	Pseudomonas_phage	36.1	4.6e-25
AYX20252.1|2640319_2641345_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
AYX20253.1|2641613_2642420_-	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
AYX20254.1|2642835_2643294_-|transposase	IS200/IS605 family transposase IS1541B	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX20255.1|2643493_2644735_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
AYX20256.1|2644829_2645066_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	45.6	7.7e-10
AYX20257.1|2645219_2645954_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.1	7.7e-16
AYX20258.1|2645967_2646897_-	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA	NA
AYX20259.1|2646934_2647885_-	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
AYX20260.1|2647891_2648926_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
AYX20261.1|2648959_2649127_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
AYX20262.1|2649139_2649664_-	23S rRNA accumulation protein YceD	NA	NA	NA	NA	NA
AYX20263.1|2649805_2650402_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AYX20264.1|2650556_2651015_-|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX22117.1|2651234_2652197_-	23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA	NA	NA	NA	NA
AYX20265.1|2652771_2656437_+	ribonuclease E	NA	NA	NA	NA	NA
AYX20266.1|2658016_2658304_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AYX20267.1|2658538_2659585_+	dihydroorotase	NA	NA	NA	NA	NA
AYX20268.1|2659897_2660143_+	DNA damage-inducible protein I	NA	K7PM44	Enterobacteria_phage	51.3	2.6e-13
AYX20269.1|2660341_2660482_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20270.1|2660648_2660945_+	biofilm formation regulator BssS	NA	NA	NA	NA	NA
AYX20271.1|2660907_2662116_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
AYX20272.1|2662476_2663592_+	N-methyl-L-tryptophan oxidase	NA	NA	NA	NA	NA
AYX20273.1|2664036_2665245_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
>prophage 14
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	2826412	2885757	4708493	transposase,plate,tRNA	Escherichia_phage(28.57%)	52	NA	NA
AYX20407.1|2826412_2828482_+|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
AYX20408.1|2828659_2828938_-	YfcL family protein	NA	NA	NA	NA	NA
AYX20409.1|2828995_2829538_-	elongation factor P hydroxylase	NA	NA	NA	NA	NA
AYX20410.1|2829637_2830444_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20411.1|2830447_2831275_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
AYX20412.1|2831280_2832366_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	47.4	2.7e-89
AYX20413.1|2832442_2833375_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AYX22127.1|2833744_2834275_+	endonuclease SmrB	NA	NA	NA	NA	NA
AYX20414.1|2834692_2835184_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
AYX20415.1|2835752_2838077_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA	NA
AYX20416.1|2838076_2839387_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
AYX20417.1|2839673_2839970_-	DUF406 family protein	NA	NA	NA	NA	NA
AYX20418.1|2840377_2841649_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA	NA
AYX20419.1|2841755_2842520_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
AYX20420.1|2842555_2843782_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA	NA
AYX20421.1|2843781_2844294_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
AYX20422.1|2844290_2844857_-	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
AYX20423.1|2844853_2846824_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
AYX20424.1|2846820_2847315_-	cytochrome c-type biogenesis protein CcmE	NA	NA	NA	NA	NA
AYX20425.1|2847311_2847614_-	heme exporter protein CcmD	NA	NA	NA	NA	NA
AYX20426.1|2847610_2848348_-	heme ABC transporter permease	NA	NA	NA	NA	NA
AYX20427.1|2848410_2849070_-	heme exporter protein CcmB	NA	NA	NA	NA	NA
AYX20428.1|2849039_2849696_-	cytochrome c biogenesis heme-transporting ATPase CcmA	NA	A0A1V0SE00	Indivirus	24.7	4.8e-09
AYX20429.1|2850140_2850608_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20430.1|2851223_2851766_+	LemA family protein	NA	NA	NA	NA	NA
AYX20431.1|2851770_2853810_+	DUF2207 domain-containing protein	NA	NA	NA	NA	NA
AYX20432.1|2854185_2854527_+	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
AYX20433.1|2854601_2854949_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20434.1|2854973_2855453_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AYX20435.1|2855549_2856356_-	ImpE family T6SS protein Cts1E	NA	NA	NA	NA	NA
AYX20436.1|2856375_2857224_-	TagK domain-containing protein	NA	NA	NA	NA	NA
AYX20437.1|2857223_2857484_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20438.1|2857582_2860420_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	23.1	3.6e-29
AYX20439.1|2860713_2864541_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AYX20440.1|2864549_2865386_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
AYX20441.1|2865401_2866184_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX20442.1|2866180_2867203_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX22128.1|2867216_2867849_-	type IV secretion protein DotU	NA	NA	NA	NA	NA
AYX20443.1|2867881_2869231_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AYX20444.1|2869234_2869774_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AYX20445.1|2870047_2870533_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA	NA
AYX20446.1|2870858_2872361_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AYX20447.1|2872384_2872909_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AYX22129.1|2873013_2873568_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
AYX22130.1|2873606_2874797_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
AYX20448.1|2874821_2876030_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
AYX20449.1|2876051_2877602_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
AYX20450.1|2877729_2878509_-	pilus assembly protein	NA	NA	NA	NA	NA
AYX20451.1|2878647_2879193_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
AYX22131.1|2879393_2882069_-	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	32.3	1.0e-81
AYX20452.1|2882851_2884732_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AYX20453.1|2884731_2885757_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 15
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	3147910	3156460	4708493	transposase	Bacillus_virus(33.33%)	7	NA	NA
AYX20671.1|3147910_3149110_-	proline/glycine betaine ABC transporter ATP-binding protein ProV	NA	G3M9Y6	Bacillus_virus	37.0	7.1e-27
AYX20672.1|3149785_3150757_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0N7CCA3	Skermania_phage	74.3	3.1e-137
AYX20673.1|3150881_3153032_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.8	1.1e-211
AYX22148.1|3153013_3153418_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	32.8	3.5e-10
AYX20674.1|3153431_3153668_-	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	53.3	5.9e-18
AYX20675.1|3154188_3154554_+	acid-shock protein	NA	NA	NA	NA	NA
AYX20676.1|3155251_3156460_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
>prophage 16
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	3402075	3466324	4708493	protease,transposase,tRNA	Saccharomonospora_phage(21.43%)	60	NA	NA
AYX20903.1|3402075_3403098_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX20904.1|3403094_3403877_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX20905.1|3406287_3406641_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20906.1|3406653_3407310_-	DNA-binding transcriptional repressor AcrR	NA	NA	NA	NA	NA
AYX20907.1|3407454_3408642_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AYX20908.1|3408658_3411811_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AYX20909.1|3411996_3412257_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
AYX20910.1|3412272_3412416_+	50S ribosomal protein L36	NA	NA	NA	NA	NA
AYX20911.1|3413289_3413643_+	hypothetical protein	NA	NA	NA	NA	NA
AYX20912.1|3413801_3414170_+	Hha toxicity modulator TomB	NA	NA	NA	NA	NA
AYX20913.1|3414218_3414422_+	modulating protein YmoA	NA	NA	NA	NA	NA
AYX20914.1|3415153_3415699_+	MGMT family protein	NA	NA	NA	NA	NA
AYX20915.1|3415834_3416356_-	lipoprotein	NA	NA	NA	NA	NA
AYX20916.1|3416612_3417473_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
AYX20917.1|3417732_3419028_-	ammonium transporter AmtB	NA	NA	NA	NA	NA
AYX20918.1|3419061_3419400_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AYX20919.1|3419805_3421629_-	SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.3	2.5e-39
AYX20920.1|3421621_3423388_-	SmdA family multidrug ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.3	7.0e-47
AYX20921.1|3423489_3423951_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AYX20922.1|3424076_3425117_+	PLP-dependent cysteine synthase family protein	NA	NA	NA	NA	NA
AYX20923.1|3425328_3426150_-	HMP-PP phosphatase	NA	NA	NA	NA	NA
AYX20924.1|3426254_3427958_+	SgrR family transcriptional regulator	NA	NA	NA	NA	NA
AYX20925.1|3428222_3428921_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	70.5	2.1e-87
AYX20926.1|3429006_3429414_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AYX20927.1|3429767_3430214_-	ComEA family DNA-binding protein	NA	NA	NA	NA	NA
AYX20928.1|3430353_3432240_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AYX20929.1|3432540_3432813_-	DNA-binding protein HU-beta	NA	A4JWM7	Burkholderia_virus	59.6	3.5e-22
AYX20930.1|3433030_3435385_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.9	4.5e-227
AYX20931.1|3435579_3436851_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.2	7.3e-131
AYX20932.1|3437056_3437680_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	62.9	1.7e-64
AYX20933.1|3438141_3439446_-	trigger factor	NA	NA	NA	NA	NA
AYX20934.1|3439862_3440183_-	transcriptional regulator BolA	NA	NA	NA	NA	NA
AYX20935.1|3440531_3441110_+	hypothetical protein	NA	NA	NA	NA	NA
AYX20936.1|3441227_3442706_+	muropeptide MFS transporter AmpG	NA	NA	NA	NA	NA
AYX20937.1|3442997_3443765_+	hypothetical protein	NA	NA	NA	NA	NA
AYX20938.1|3444134_3445091_+	cytochrome o ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AYX20939.1|3445095_3447087_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AYX20940.1|3447076_3447691_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AYX20941.1|3447690_3448023_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AYX22157.1|3448033_3448924_+	protoheme IX farnesyltransferase	NA	NA	NA	NA	NA
AYX20942.1|3449401_3450772_+	MFS transporter	NA	NA	NA	NA	NA
AYX20943.1|3450895_3451387_-	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA	NA
AYX20944.1|3451503_3451692_+	hypothetical protein	NA	NA	NA	NA	NA
AYX20945.1|3451618_3452530_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
AYX20946.1|3452492_3453083_+	protein deglycase YajL	NA	NA	NA	NA	NA
AYX20947.1|3453150_3454602_-|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
AYX20948.1|3454951_3455206_+	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA	NA
AYX20949.1|3455210_3456131_+	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA	NA
AYX20950.1|3456286_3458146_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
AYX20951.1|3458324_3458783_-|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX20952.1|3458996_3459482_-	phosphatidylglycerophosphatase A	NA	NA	NA	NA	NA
AYX20953.1|3459474_3460464_-	thiamine-phosphate kinase	NA	NA	NA	NA	NA
AYX20954.1|3460704_3461121_-	N utilization substance protein B	NA	NA	NA	NA	NA
AYX20955.1|3461141_3461612_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	47.7	3.5e-30
AYX20956.1|3461747_3462857_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	34.2	1.5e-50
AYX20957.1|3463006_3463456_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
AYX20958.1|3463526_3464129_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20959.1|3464161_3464857_-	hypothetical protein	NA	NA	NA	NA	NA
AYX20960.1|3465154_3465613_-|transposase	IS200/IS605 family transposase IS1541B	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX20961.1|3465865_3466324_-|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
>prophage 17
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	4182500	4345819	4708493	protease,plate,transposase	Escherichia_phage(28.57%)	104	NA	NA
AYX21572.1|4182500_4183337_+|protease	rhomboid family intramembrane serine protease GlpG	protease	NA	NA	NA	NA
AYX21573.1|4183371_4184130_+	DeoR/GlpR family transcriptional regulator	NA	NA	NA	NA	NA
AYX21574.1|4184896_4185679_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX21575.1|4185675_4186698_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX22204.1|4186711_4186795_-	coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AYX21576.1|4187831_4190198_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AYX21577.1|4190201_4190399_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21578.1|4190837_4192115_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AYX21579.1|4192127_4195247_+	hydrophobe/amphiphile efflux-1 family RND transporter	NA	NA	NA	NA	NA
AYX21580.1|4195381_4196872_-	ShET2/EspL2 family type III secretion system effector toxin	NA	NA	NA	NA	NA
AYX21581.1|4197149_4197737_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21582.1|4198590_4209708_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	37.8	1.6e-133
AYX21583.1|4209810_4211691_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21584.1|4212086_4212173_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21585.1|4212253_4213129_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21586.1|4213458_4213917_+|transposase	IS200/IS605 family transposase IS1541B	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX21587.1|4214048_4215866_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21588.1|4215884_4216070_-	hypothetical protein	NA	NA	NA	NA	NA
AYX22206.1|4216436_4216640_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22205.1|4216584_4218141_+	AbgT family transporter	NA	NA	NA	NA	NA
AYX21589.1|4218218_4219451_+	peptidase T	NA	A0A0K2CPK3	Brevibacillus_phage	39.1	1.2e-05
AYX21590.1|4219838_4221911_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AYX21591.1|4225488_4226511_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX21592.1|4226507_4227290_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX21593.1|4227350_4233956_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	25.0	8.7e-42
AYX21594.1|4233963_4235652_+	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	25.0	3.1e-36
AYX21595.1|4235664_4241448_+	non-ribosomal peptide synthetase	NA	A0A2K9L3I8	Tupanvirus	31.3	1.3e-41
AYX21596.1|4241444_4242515_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
AYX21597.1|4242511_4243639_+	thiazolinyl imide reductase	NA	NA	NA	NA	NA
AYX21598.1|4243631_4244396_+	thioesterase	NA	NA	NA	NA	NA
AYX21599.1|4244385_4245690_+	MFS transporter	NA	NA	NA	NA	NA
AYX21600.1|4245689_4247462_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.6	7.8e-30
AYX21601.1|4247454_4249212_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.0	6.7e-34
AYX21602.1|4249534_4250410_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
AYX21603.1|4250845_4251244_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21604.1|4252311_4252512_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21605.1|4252783_4254127_+	gluconate transporter GntP	NA	NA	NA	NA	NA
AYX22207.1|4259624_4263317_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AYX21606.1|4263902_4266152_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	27.0	1.2e-27
AYX21607.1|4266177_4267497_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21608.1|4267510_4271827_+	type IV secretion protein Rhs	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	49.6	1.8e-27
AYX21609.1|4271745_4271937_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21610.1|4271957_4272344_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21611.1|4272887_4273301_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21612.1|4273480_4274851_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
AYX22208.1|4275132_4276128_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AYX21613.1|4276445_4277609_+	1,4-beta-xylanase	NA	NA	NA	NA	NA
AYX21614.1|4277498_4278853_-|transposase	IS3-like element IS1661 family transposase	transposase	A0A1B1P773	Bacillus_phage	44.7	1.1e-55
AYX21615.1|4278903_4279647_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AYX21616.1|4279649_4280699_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AYX21617.1|4280824_4282141_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AYX21618.1|4282140_4282686_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AYX21619.1|4282688_4284035_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AYX21620.1|4284034_4284802_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AYX21621.1|4284812_4287416_+	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	31.5	6.4e-89
AYX21622.1|4287412_4288210_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AYX21623.1|4288206_4288893_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
AYX22209.1|4288889_4290287_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AYX21624.1|4290318_4293852_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AYX21625.1|4293976_4294759_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21626.1|4294755_4295289_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21627.1|4295310_4297713_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	26.3	3.8e-27
AYX21628.1|4297718_4298177_+	DUF1795 domain-containing protein	NA	NA	NA	NA	NA
AYX21629.1|4298169_4301034_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21630.1|4301061_4302432_+	RHS repeat protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	48.6	3.3e-28
AYX21631.1|4302433_4302919_+	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
AYX21632.1|4302968_4303160_-	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA	NA
AYX21633.1|4303235_4303460_-	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA	NA
AYX21634.1|4303541_4303949_-	XRE family transcriptional regulator	NA	S5MUA5	Brevibacillus_phage	32.2	3.1e-06
AYX21635.1|4304309_4306508_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	26.3	2.6e-27
AYX21636.1|4306510_4306933_+	DUF1795 domain-containing protein	NA	NA	NA	NA	NA
AYX22210.1|4306934_4307003_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21637.1|4306977_4311516_+	hypothetical protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	35.2	3.2e-27
AYX21638.1|4311524_4312319_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22211.1|4312376_4312646_-	type I addiction module toxin, SymE family	NA	NA	NA	NA	NA
AYX21639.1|4312665_4313565_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
AYX21640.1|4314749_4315772_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX21641.1|4315785_4315899_-	chemotaxis protein	NA	NA	NA	NA	NA
AYX21642.1|4315861_4316413_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYX21643.1|4316623_4317574_+	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	31.2	8.7e-28
AYX21644.1|4317608_4318568_-	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA	NA	NA	NA	NA
AYX21645.1|4318564_4319602_-	UDP-N-acetylenolpyruvoylglucosamine reductase	NA	NA	NA	NA	NA
AYX21646.1|4325268_4325454_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21647.1|4325737_4326271_-	menaquinone-dependent protoporphyrinogen IX dehydrogenase	NA	NA	NA	NA	NA
AYX21648.1|4326292_4327744_-	Trk system potassium transporter TrkH	NA	NA	NA	NA	NA
AYX21649.1|4328332_4328791_-|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX21650.1|4328895_4329105_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21651.1|4329104_4330436_-	Xaa-Pro dipeptidase	NA	NA	NA	NA	NA
AYX21652.1|4330762_4332952_+	fatty acid oxidation complex subunit alpha FadB	NA	NA	NA	NA	NA
AYX21653.1|4332963_4334127_+	acetyl-CoA C-acyltransferase FadA	NA	NA	NA	NA	NA
AYX21654.1|4334286_4334988_-	NAD(P)H-flavin reductase	NA	NA	NA	NA	NA
AYX22212.1|4335042_4336539_-	3-octaprenyl-4-hydroxybenzoate decarboxylase	NA	NA	NA	NA	NA
AYX21655.1|4336786_4337275_+	transcription/translation regulatory transformer protein RfaH	NA	NA	NA	NA	NA
AYX21656.1|4337384_4338407_-	porphobilinogen synthase	NA	NA	NA	NA	NA
AYX21657.1|4338421_4338757_-	deoxyribonuclease	NA	NA	NA	NA	NA
AYX21658.1|4338795_4339578_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX21659.1|4339574_4340597_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX21660.1|4340610_4340691_-	glutathione S-transferase	NA	NA	NA	NA	NA
AYX21661.1|4340807_4340957_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21662.1|4341131_4341371_-	hypothetical protein	NA	NA	NA	NA	NA
AYX22213.1|4341640_4342876_+	HlyD family secretion protein	NA	NA	NA	NA	NA
AYX21663.1|4342868_4344983_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	26.5	4.8e-34
AYX21664.1|4344926_4345172_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21665.1|4345360_4345819_+|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
>prophage 18
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	4708493	4399914	4447445	4708493	integrase,transposase,tRNA	Escherichia_phage(30.77%)	45	4405576:4405589	4449845:4449858
AYX21719.1|4399914_4400607_+|tRNA	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	tRNA	NA	NA	NA	NA
AYX21720.1|4400607_4402689_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
AYX21721.1|4402880_4402973_+	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
AYX21722.1|4403054_4404269_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
AYX21723.1|4404506_4405892_+	uracil-xanthine permease	NA	H9YQ34	environmental_Halophage	80.0	3.8e-56
4405576:4405589	attL	TGCTCATCATTTTG	NA	NA	NA	NA
AYX21724.1|4406039_4407749_+	AsmA family protein	NA	NA	NA	NA	NA
AYX21725.1|4407883_4408807_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYX21726.1|4408982_4409063_+	coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AYX21727.1|4409076_4410099_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX21728.1|4410095_4410878_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX21729.1|4410951_4411389_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
AYX21730.1|4411395_4412280_-	virulence factor BrkB family protein	NA	NA	NA	NA	NA
AYX21731.1|4412376_4412967_-	glucose-1-phosphatase	NA	NA	NA	NA	NA
AYX21732.1|4413288_4415112_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	42.3	1.2e-20
AYX21733.1|4415673_4417083_+	glutamate--ammonia ligase	NA	NA	NA	NA	NA
AYX21734.1|4417099_4417189_-	AAA family ATPase	NA	NA	NA	NA	NA
AYX21735.1|4417154_4417361_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21736.1|4417350_4417809_+|transposase	IS200/IS605 family transposase IS1541A	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX21737.1|4418045_4419095_+	nitrogen regulation protein NR(II)	NA	Q8QKV7	Ectocarpus_siliculosus_virus	25.2	4.2e-07
AYX21738.1|4419102_4420515_+	nitrogen regulation protein NR(I)	NA	Q56AR1	Bacillus_thuringiensis_phage	25.6	3.1e-05
AYX21739.1|4420568_4421942_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AYX22216.1|4421944_4422112_-	high mobility group protein Z	NA	NA	NA	NA	NA
AYX21740.1|4422124_4422691_-	GTPase-activating protein	NA	NA	NA	NA	NA
AYX21741.1|4422702_4422981_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21742.1|4423435_4424086_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
AYX21743.1|4424337_4424796_-|transposase	IS200/IS605 family transposase IS1541B	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
AYX21744.1|4425204_4428003_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	32.8	2.7e-69
AYX21745.1|4428494_4429118_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AYX21746.1|4429145_4430132_-	serine/threonine protein kinase	NA	NA	NA	NA	NA
AYX21747.1|4430211_4430481_-	DUF1040 family protein	NA	NA	NA	NA	NA
AYX21748.1|4430580_4431222_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
AYX22217.1|4431221_4431752_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
AYX21749.1|4431809_4433018_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
AYX21750.1|4433139_4433370_-	hypothetical protein	NA	NA	NA	NA	NA
AYX21751.1|4438664_4438850_+	hypothetical protein	NA	NA	NA	NA	NA
AYX21752.1|4439218_4439911_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AYX21753.1|4439990_4441415_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
AYX21754.1|4441411_4441582_-	transcriptional regulator	NA	NA	NA	NA	NA
AYX21755.1|4441544_4441631_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AYX21756.1|4441634_4442561_-	ribokinase	NA	NA	NA	NA	NA
AYX21757.1|4442611_4443031_-	D-ribose pyranase	NA	NA	NA	NA	NA
AYX21758.1|4443235_4445104_-	low affinity potassium transporter Kup	NA	A7J6G4	Paramecium_bursaria_Chlorella_virus	30.5	5.8e-68
AYX21759.1|4445531_4446314_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX21760.1|4446310_4447333_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX21761.1|4447346_4447445_-|integrase	integrase	integrase	NA	NA	NA	NA
4449845:4449858	attR	CAAAATGATGAGCA	NA	NA	NA	NA
>prophage 1
CP033697	Yersinia pestis strain FDAARGOS_601 plasmid unnamed1, complete sequence	70300	40566	63537	70300	protease,integrase,transposase	Enterobacteria_phage(50.0%)	24	40061:40074	53948:53961
40061:40074	attL	AAACAAATGAGTTA	NA	NA	NA	NA
AYX17998.1|40566_41535_-|protease	YopT-type cysteine protease domain-containing protein	protease	NA	NA	NA	NA
AYX17999.1|42034_42583_+	hypothetical protein	NA	NA	NA	NA	NA
AYX18000.1|43059_43173_+	conjugal transfer protein TraT	NA	NA	NA	NA	NA
AYX18001.1|43180_43810_+	complement resistance protein TraT	NA	NA	NA	NA	NA
AYX18002.1|45074_45200_-|integrase	integrase	integrase	NA	NA	NA	NA
AYX18003.1|45821_46988_+	plasmid-partitioning protein SopA	NA	Q7Y3Y6	Yersinia_phage	85.3	3.5e-196
AYX18028.1|46987_47950_+	ParB/RepB/Spo0J family plasmid partition protein	NA	Q7Y3Y7	Yersinia_phage	56.6	3.1e-89
AYX18029.1|48060_48330_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18004.1|49211_49454_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
AYX18005.1|49446_49746_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AYX18006.1|49885_50545_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18007.1|50738_51131_+	YopE regulator	NA	NA	NA	NA	NA
AYX18008.1|51940_53113_+|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	95.4	1.6e-220
AYX18009.1|53886_54312_+	CesT family type III secretion system chaperone	NA	NA	NA	NA	NA
53948:53961	attR	AAACAAATGAGTTA	NA	NA	NA	NA
AYX18010.1|54235_54424_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18011.1|54459_55559_-|transposase	IS3-like element ISYpe1 family transposase	transposase	S5WIU1	Leptospira_phage	38.5	1.4e-45
AYX18012.1|55658_55988_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18013.1|56126_56591_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18014.1|56609_57161_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	80.3	5.9e-77
AYX18015.1|57324_59640_+|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	51.5	5.0e-279
AYX18016.1|61928_62228_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18017.1|62251_62521_-	hypothetical protein	NA	NA	NA	NA	NA
AYX18018.1|62589_63048_+	conjugal transfer protein TraI	NA	NA	NA	NA	NA
AYX18019.1|63219_63537_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 1
CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	132950	12344	71452	132950	transposase,integrase,capsid,terminase	Salmonella_phage(87.72%)	71	19741:19755	32596:32610
AYX22242.1|12344_13367_-|transposase	IS110 family transposase IS1618	transposase	NA	NA	NA	NA
AYX22243.1|13835_15044_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
AYX22244.1|15047_15239_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22245.1|15392_16316_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AYX22246.1|16625_17402_+	chaperone protein caf1M	NA	NA	NA	NA	NA
AYX22247.1|17426_19928_+	F1 capsule-anchoring protein	NA	NA	NA	NA	NA
19741:19755	attL	CATCCAGCTCTGGCA	NA	NA	NA	NA
AYX22248.1|20008_20521_+	F1 capsule antigen	NA	NA	NA	NA	NA
AYX22351.1|21280_22384_+|integrase	integrase	integrase	A0A1P8DTG6	Proteus_phage	30.9	5.2e-24
AYX22249.1|22378_22765_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AYX22250.1|23032_23245_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22251.1|23953_24976_+|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX22252.1|24972_25755_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX22253.1|27776_29012_+	porphyrin biosynthesis protein	NA	J9Q733	Salmonella_phage	99.3	3.0e-238
AYX22254.1|29014_29218_+	hypothetical protein	NA	J9Q6I7	Salmonella_phage	98.5	8.0e-32
AYX22255.1|29192_32717_+	DNA polymerase III subunit alpha	NA	J9Q7Z2	Salmonella_phage	99.2	0.0e+00
32596:32610	attR	TGCCAGAGCTGGATG	NA	NA	NA	NA
AYX22256.1|32713_33157_+	hypothetical protein	NA	J9Q7S4	Salmonella_phage	100.0	7.8e-72
AYX22257.1|33186_33750_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	64.6	2.2e-63
AYX22258.1|33822_34074_-	hypothetical protein	NA	NA	NA	NA	NA
AYX22259.1|34252_34726_+	hypothetical protein	NA	J9Q6I8	Salmonella_phage	98.6	2.9e-72
AYX22260.1|34845_35874_+	regulator	NA	J9Q7Z3	Salmonella_phage	98.5	1.3e-165
AYX22261.1|35934_36879_+	exonuclease	NA	J9Q7S6	Salmonella_phage	99.0	1.3e-180
AYX22262.1|36878_37145_+	hypothetical protein	NA	J9Q7G8	Salmonella_phage	100.0	1.6e-40
AYX22263.1|37147_38224_+	recombinase	NA	J9Q736	Salmonella_phage	99.4	1.2e-203
AYX22264.1|38314_38515_+	hypothetical protein	NA	J9Q6J0	Salmonella_phage	97.0	1.1e-25
AYX22265.1|38518_39349_+	SPFH/Band 7/PHB domain protein	NA	J9Q7Z4	Salmonella_phage	98.6	9.3e-127
AYX22266.1|39502_39874_+	DUF2591 domain-containing protein	NA	J9Q7S7	Salmonella_phage	87.8	4.0e-61
AYX22267.1|39951_40734_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX22268.1|40730_41753_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX22269.1|41822_42227_+	hypothetical protein	NA	J9Q7G9	Salmonella_phage	97.7	1.7e-70
AYX22270.1|42294_42570_+	hypothetical protein	NA	J9Q738	Salmonella_phage	95.6	1.7e-45
AYX22271.1|42610_42790_+	hypothetical protein	NA	J9Q6J1	Salmonella_phage	86.4	5.8e-18
AYX22272.1|42786_43122_+	hypothetical protein	NA	J9Q7Z5	Salmonella_phage	91.0	5.2e-52
AYX22273.1|43121_43334_+	hypothetical protein	NA	J9Q7S8	Salmonella_phage	95.7	6.8e-34
AYX22274.1|43284_43467_-	hypothetical protein	NA	NA	NA	NA	NA
AYX22275.1|43902_44967_-	replication protein RepA	NA	J9Q7H0	Salmonella_phage	98.6	2.4e-188
AYX22276.1|45711_46356_+	hypothetical protein	NA	J9Q739	Salmonella_phage	98.1	1.8e-122
AYX22277.1|46431_46578_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22278.1|47633_47906_-	hypothetical protein	NA	NA	NA	NA	NA
AYX22279.1|47815_48004_-	hypothetical protein	NA	NA	NA	NA	NA
AYX22280.1|48152_49238_+	exonuclease SbcCD subunit D	NA	J9Q7S9	Salmonella_phage	98.6	7.7e-206
AYX22281.1|49234_49459_+	hypothetical protein	NA	J9Q7H1	Salmonella_phage	94.9	8.5e-27
AYX22282.1|49467_51384_+	exonuclease	NA	J9Q741	Salmonella_phage	98.6	0.0e+00
AYX22283.1|51373_52120_+	hypothetical protein	NA	J9Q6J5	Salmonella_phage	96.4	4.1e-134
AYX22284.1|52132_52702_+	hypothetical protein	NA	J9Q7Z7	Salmonella_phage	100.0	5.8e-104
AYX22285.1|52910_53369_+|transposase	IS200/IS605 family transposase IS1541B	transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	35.3	5.0e-13
AYX22286.1|53478_53706_-	hypothetical protein	NA	NA	NA	NA	NA
AYX22287.1|53790_54441_-	hypothetical protein	NA	J9Q754	Salmonella_phage	99.5	4.1e-114
AYX22288.1|54763_55291_-	transcriptional regulator	NA	J9Q6L0	Salmonella_phage	98.0	6.4e-81
AYX22289.1|55295_55718_-	hypothetical protein	NA	J9Q806	Salmonella_phage	85.0	4.1e-62
AYX22290.1|55777_56056_-	hypothetical protein	NA	J9Q7T9	Salmonella_phage	97.8	4.4e-41
AYX22291.1|56058_57618_-	DEAD/DEAH box helicase	NA	J9Q7I4	Salmonella_phage	99.0	1.1e-293
AYX22292.1|57682_58381_+	chromosome partitioning protein ParB	NA	J9Q756	Salmonella_phage	98.7	9.6e-125
AYX22293.1|58380_59049_+	chromosome partitioning protein ParB	NA	J9Q6L1	Salmonella_phage	98.2	9.5e-114
AYX22294.1|59045_59684_+	ATP-binding cassette domain-containing protein	NA	J9Q807	Salmonella_phage	98.1	4.7e-110
AYX22295.1|59676_59931_+	hypothetical protein	NA	J9Q7U0	Salmonella_phage	97.6	2.0e-40
AYX22296.1|59927_60827_+	hypothetical protein	NA	J9Q7I6	Salmonella_phage	99.7	8.2e-169
AYX22297.1|60836_61103_+	hypothetical protein	NA	J9Q757	Salmonella_phage	100.0	1.3e-42
AYX22298.1|61298_61940_+	DNA-binding protein	NA	J9Q6D4	Salmonella_phage	98.1	1.2e-108
AYX22299.1|61942_63199_+|terminase	terminase	terminase	J9Q7Y2	Salmonella_phage	100.0	1.8e-251
AYX22300.1|63217_64807_+	hypothetical protein	NA	J9Q7R1	Salmonella_phage	99.2	4.2e-301
AYX22301.1|64829_65663_+	hypothetical protein	NA	J9Q7F4	Salmonella_phage	91.3	5.8e-137
AYX22302.1|65689_66565_+|capsid	phage major capsid protein	capsid	J9Q710	Salmonella_phage	99.7	8.5e-163
AYX22303.1|66639_67302_+	Ig domain-containing protein	NA	J9Q6D6	Salmonella_phage	97.2	8.5e-107
AYX22304.1|67345_67780_+	hypothetical protein	NA	J9Q7Y3	Salmonella_phage	99.3	3.1e-73
AYX22305.1|67779_68613_+	hypothetical protein	NA	J9Q7R2	Salmonella_phage	99.6	2.9e-152
AYX22306.1|68710_69055_+	hypothetical protein	NA	J9Q7F6	Salmonella_phage	100.0	1.9e-57
AYX22307.1|69045_69519_+	hypothetical protein	NA	J9Q711	Salmonella_phage	99.4	8.9e-82
AYX22308.1|69520_69904_+	hypothetical protein	NA	J9Q6D8	Salmonella_phage	98.4	1.1e-66
AYX22309.1|69978_70725_+	Ig domain-containing protein	NA	J9Q7Y4	Salmonella_phage	98.8	5.2e-129
AYX22310.1|70784_71102_+	hypothetical protein	NA	J9Q7R3	Salmonella_phage	98.1	6.0e-50
AYX22311.1|71182_71452_+	hypothetical protein	NA	J9Q7F7	Salmonella_phage	100.0	8.4e-37
>prophage 2
CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	132950	76078	93324	132950	transposase,tail	Salmonella_phage(50.0%)	15	NA	NA
AYX22312.1|76078_76414_+|tail	phage tail protein	tail	J9Q6E1	Salmonella_phage	96.4	1.1e-57
AYX22313.1|76470_77202_+|tail	phage minor tail protein L	tail	J9Q7Y5	Salmonella_phage	99.1	5.7e-136
AYX22314.1|77194_77992_+|tail	phage tail protein	tail	J9Q7R4	Salmonella_phage	96.2	1.4e-156
AYX22315.1|77979_78567_+|tail	tail assembly protein	tail	J9Q7F8	Salmonella_phage	92.8	5.1e-103
AYX22316.1|78582_83220_+	DUF1983 domain-containing protein	NA	J9Q713	Salmonella_phage	88.6	0.0e+00
AYX22352.1|83237_83855_+	DUF4376 domain-containing protein	NA	Q9LA61	Enterobacterial_phage	38.8	3.0e-29
AYX22317.1|83887_86824_+|tail	phage tail protein	tail	J9Q6E3	Salmonella_phage	33.1	4.6e-11
AYX22318.1|86820_87033_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22319.1|87125_87734_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	62.2	4.8e-64
AYX22320.1|87867_88650_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX22321.1|88646_89669_-|transposase	IS21 family transposase IS100	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
AYX22322.1|89792_91802_-	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	30.3	7.7e-26
AYX22323.1|91874_92105_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
AYX22324.1|92454_92688_+	hypothetical protein	NA	NA	NA	NA	NA
AYX22325.1|92817_93324_-	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	29.5	1.1e-08
