The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033829	Stenotrophomonas maltophilia strain FDAARGOS_507 chromosome, complete genome	4577568	299439	311958	4577568		Escherichia_phage(28.57%)	11	NA	NA
AYZ68710.1|299439_300798_-	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	26.6	3.9e-29
AYZ68711.1|300939_301881_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
AYZ68712.1|301880_302627_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
AYZ68713.1|302891_303947_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	45.3	5.0e-77
AYZ68714.1|303961_304849_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	58.2	1.6e-95
AYZ68715.1|304845_305403_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	49.4	3.0e-44
AYZ68716.1|305399_306305_+	dTDP-4-dehydrorhamnose reductase	NA	A0A1D7XFA3	Escherichia_phage	35.8	1.2e-26
AYZ68717.1|306473_309800_-	helicase	NA	A0A0P0YNJ0	Yellowstone_lake_phycodnavirus	34.3	1.5e-45
AYZ68718.1|309957_310689_+	CoA transferase subunit A	NA	NA	NA	NA	NA
AYZ68719.1|310690_311323_+	CoA transferase subunit B	NA	NA	NA	NA	NA
AYZ68720.1|311370_311958_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	A0A2K9L0M4	Tupanvirus	33.7	1.4e-23
>prophage 2
CP033829	Stenotrophomonas maltophilia strain FDAARGOS_507 chromosome, complete genome	4577568	667665	743850	4577568	protease,tail,plate	Escherichia_phage(18.52%)	68	NA	NA
AYZ69024.1|667665_668292_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.4	7.7e-57
AYZ69025.1|668418_669708_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.0	2.9e-135
AYZ69026.1|669851_672299_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	6.6e-221
AYZ69027.1|672516_672789_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	62.9	4.5e-22
AYZ69028.1|673632_675588_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AYZ69029.1|675802_677002_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AYZ69030.1|676998_677763_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AYZ69031.1|677774_678425_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69032.1|678438_678891_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	53.4	1.0e-42
AYZ69033.1|678895_679627_+	DNA polymerase III subunit epsilon	NA	A0A1B2LRV5	Wolbachia_phage	42.4	3.8e-07
AYZ69034.1|679739_680444_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
AYZ69035.1|681341_684356_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
AYZ69036.1|684650_685055_+	hypothetical protein	NA	A0A1C9C5K8	Heterosigma_akashiwo_virus	35.3	1.3e-17
AYZ69037.1|685133_686180_-	lipopolysaccharide heptosyltransferase family protein	NA	NA	NA	NA	NA
AYZ69038.1|686200_686950_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA	NA
AYZ69039.1|686949_687717_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AYZ69040.1|687713_688103_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
AYZ69041.1|688578_688896_+	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA	NA
AYZ69042.1|689254_700159_+	transporter	NA	NA	NA	NA	NA
AYZ72453.1|700215_700659_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYZ69043.1|701033_701408_+	DUF3592 domain-containing protein	NA	NA	NA	NA	NA
AYZ69044.1|701981_704033_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	41.4	2.1e-47
AYZ69045.1|704039_704360_+	nucleoid-associated protein, YbaB/EbfC family	NA	NA	NA	NA	NA
AYZ69046.1|704471_705071_+	recombination protein RecR	NA	NA	NA	NA	NA
AYZ69047.1|705138_705498_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
AYZ69048.1|705575_706103_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69049.1|706099_708049_-	DUF3488 domain-containing protein	NA	NA	NA	NA	NA
AYZ69050.1|708041_708986_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AYZ69051.1|708988_709942_-	AAA family ATPase	NA	NA	NA	NA	NA
AYZ69052.1|709984_711826_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
AYZ69053.1|712037_712607_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AYZ69054.1|712720_713230_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
AYZ69055.1|713337_713532_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
AYZ69056.1|713623_714601_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
AYZ69057.1|714679_715462_+	serine/threonine protein phosphatase	NA	NA	NA	NA	NA
AYZ69058.1|715718_716663_+	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA	NA
AYZ69059.1|716745_717489_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.3	4.7e-13
AYZ69060.1|717641_717881_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	44.6	4.6e-10
AYZ69061.1|718024_719287_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA	NA
AYZ69062.1|719477_720842_+	aminodeoxychorismate synthase component I	NA	NA	NA	NA	NA
AYZ69063.1|721039_722101_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
AYZ69064.1|722097_722763_+	dTMP kinase	NA	W8D0J5	Erwinia_phage	34.9	5.5e-21
AYZ69065.1|722759_723716_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AYZ69066.1|723712_724066_+	pilus assembly protein PilZ	NA	NA	NA	NA	NA
AYZ69067.1|724253_724868_+	tautomerase family protein	NA	NA	NA	NA	NA
AYZ69068.1|724898_725972_-|tail	phage tail protein	tail	D5LGY1	Escherichia_phage	52.2	1.1e-95
AYZ69069.1|725962_726178_-|tail	phage tail protein	tail	A0A193GYC8	Enterobacter_phage	54.3	1.6e-14
AYZ69070.1|726161_726629_-|tail	phage tail protein	tail	A0A218M4I2	Erwinia_phage	35.2	1.1e-15
AYZ69071.1|726631_729094_-|tail	phage tail tape measure protein	tail	K4ICR4	Acidithiobacillus_phage	26.8	9.2e-13
AYZ69072.1|729214_729505_-|tail	phage tail assembly protein	tail	A0A088FQX2	Escherichia_phage	56.4	5.5e-18
AYZ69073.1|729586_730090_-|tail	phage major tail tube protein	tail	A0A193GYM4	Enterobacter_phage	54.2	7.1e-45
AYZ69074.1|730092_731295_-|tail	phage tail protein	tail	A0A088FVH5	Escherichia_phage	54.2	6.1e-127
AYZ69075.1|731401_732061_-	hypothetical protein	NA	V9IQM3	Stenotrophomonas_phage	33.5	3.8e-22
AYZ69076.1|732062_734168_-|tail	tail fiber domain-containing protein	tail	V9IQX0	Stenotrophomonas_phage	36.1	2.4e-94
AYZ69077.1|734175_734955_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	50.6	1.2e-43
AYZ69078.1|734947_735844_-|plate	baseplate assembly protein	plate	V5YTH6	Pseudomonas_phage	56.5	6.4e-81
AYZ69079.1|735846_736185_-|plate	phage baseplate protein	plate	A0A193GYY8	Enterobacter_phage	62.2	7.8e-32
AYZ69080.1|736237_736828_-|plate	phage baseplate assembly protein V	plate	A0A193GYL5	Enterobacter_phage	38.2	1.9e-25
AYZ69081.1|736824_737379_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69082.1|737731_738109_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69083.1|738105_738591_-	glycoside hydrolase	NA	D5LH07	Escherichia_phage	55.6	4.1e-42
AYZ69084.1|738587_738938_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69085.1|738934_739384_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69086.1|739719_740103_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69087.1|740255_740894_-	hypothetical protein	NA	A0A2H4J8A1	uncultured_Caudovirales_phage	37.6	1.0e-19
AYZ69088.1|740935_741163_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69089.1|741237_741513_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69090.1|741513_743850_-	toprim domain-containing protein	NA	D5LH15	Escherichia_phage	43.3	2.8e-136
>prophage 3
CP033829	Stenotrophomonas maltophilia strain FDAARGOS_507 chromosome, complete genome	4577568	1474442	1488494	4577568	capsid,head,protease,tail,portal,terminase	Pseudomonas_phage(50.0%)	25	NA	NA
AYZ69767.1|1474442_1475333_+	helix-turn-helix domain-containing protein	NA	A0A0U4IBP5	Pseudomonas_phage	41.0	6.7e-30
AYZ69768.1|1475322_1475985_+	hypothetical protein	NA	A0A1B0VMD9	Pseudomonas_phage	37.8	8.2e-25
AYZ69769.1|1475981_1476176_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69770.1|1476175_1476544_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69771.1|1476540_1476750_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69772.1|1476739_1477168_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69773.1|1477157_1477418_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69774.1|1478146_1478635_+	lysozyme	NA	D5LH07	Escherichia_phage	78.9	3.4e-68
AYZ69775.1|1478631_1478946_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69776.1|1479114_1479363_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ69777.1|1479440_1479869_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69778.1|1479865_1480123_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69779.1|1480122_1480482_+	DUF1064 domain-containing protein	NA	Q3HQZ9	Burkholderia_phage	66.7	1.1e-39
AYZ69780.1|1480481_1480661_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69781.1|1480641_1480905_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69782.1|1480904_1481303_+	HNH endonuclease	NA	A0A2H4PHY5	Pseudomonas_phage	53.6	2.4e-11
AYZ69783.1|1481385_1481766_+	hypothetical protein	NA	Q9XJT7	Pseudomonas_phage	57.1	4.7e-33
AYZ69784.1|1481769_1483440_+|terminase	terminase large subunit	terminase	A0A0U4B0C7	Pseudomonas_phage	69.2	1.8e-225
AYZ69785.1|1483439_1484744_+|portal	phage portal protein	portal	C7BGG8	Burkholderia_phage	37.0	5.9e-59
AYZ69786.1|1484730_1485468_+|protease	Clp protease ClpP	protease	C7BGG9	Burkholderia_phage	49.5	1.0e-47
AYZ69787.1|1485536_1486781_+|capsid	phage major capsid protein	capsid	C7BGH0	Burkholderia_phage	47.1	4.8e-95
AYZ69788.1|1486838_1487243_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ69789.1|1487246_1487669_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
AYZ69790.1|1487665_1487998_+|head,tail	head-tail adaptor protein	head,tail	B5WZS5	Pseudomonas_phage	34.5	2.6e-11
AYZ69791.1|1487990_1488494_+	hypothetical protein	NA	Q8W6U1	Burkholderia_virus	32.5	4.3e-10
>prophage 4
CP033829	Stenotrophomonas maltophilia strain FDAARGOS_507 chromosome, complete genome	4577568	3212706	3225505	4577568	terminase	Pseudomonas_phage(18.18%)	18	NA	NA
AYZ71287.1|3212706_3213027_-	DUF2829 domain-containing protein	NA	A0A222YXY1	Escherichia_phage	50.6	6.1e-18
AYZ71288.1|3213088_3213367_-	hypothetical protein	NA	A0A1D8EX57	Mycobacterium_phage	46.4	6.0e-14
AYZ71289.1|3213379_3215707_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ71290.1|3215758_3217126_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0U1SZM0	Pseudomonas_phage	44.4	6.0e-46
AYZ71291.1|3217122_3217647_-	DNA packaging protein	NA	Q775B8	Bordetella_phage	40.6	1.8e-19
AYZ71292.1|3217636_3217879_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ71293.1|3217875_3218079_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ71294.1|3218242_3218683_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ71295.1|3218718_3218919_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ71296.1|3218915_3219254_-	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	70.4	1.5e-38
AYZ71297.1|3219250_3219532_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ71298.1|3219668_3219941_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ71299.1|3219940_3220408_-	NinB family protein	NA	I6R9D0	Salmonella_phage	39.3	1.2e-11
AYZ72541.1|3220529_3220658_-	DUF551 domain-containing protein	NA	H2BDH1	Pseudomonas_virus	56.4	1.1e-07
AYZ71300.1|3221258_3222671_-	replicative DNA helicase	NA	A0A1B0VG30	Salmonella_phage	39.8	4.4e-76
AYZ71301.1|3222667_3223723_-	HNH endonuclease	NA	A0A2I7RGI7	Vibrio_phage	52.8	6.3e-27
AYZ71302.1|3224496_3224727_-	hypothetical protein	NA	W6MWX8	Pseudomonas_phage	54.7	4.2e-05
AYZ71303.1|3224827_3225505_+	helix-turn-helix transcriptional regulator	NA	C8CLH0	Xylella_phage	27.3	8.4e-09
>prophage 5
CP033829	Stenotrophomonas maltophilia strain FDAARGOS_507 chromosome, complete genome	4577568	3229002	3236349	4577568	integrase	Xylella_phage(33.33%)	14	3230717:3230732	3236302:3236317
AYZ71310.1|3229002_3229782_+	recombinase	NA	H6WZG6	Escherichia_phage	27.3	3.4e-06
AYZ71311.1|3229778_3230000_+	hypothetical protein	NA	B7SYG4	Stenotrophomonas_phage	64.5	4.3e-15
AYZ71312.1|3229996_3230218_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ71313.1|3230214_3230433_+	hypothetical protein	NA	NA	NA	NA	NA
3230717:3230732	attL	CATGGATTCAGCCGCC	NA	NA	NA	NA
AYZ71314.1|3230717_3231146_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ71315.1|3231138_3231366_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ71316.1|3231358_3231538_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ71317.1|3231534_3231717_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ71318.1|3231709_3231901_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ71319.1|3231897_3232974_+	DNA cytosine methyltransferase	NA	A0A1B1IRC8	uncultured_Mediterranean_phage	46.8	4.5e-73
AYZ71320.1|3232985_3233201_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	61.5	2.6e-12
AYZ71321.1|3233200_3234229_+|integrase	integrase	integrase	C8CLF4	Xylella_phage	62.0	3.6e-112
AYZ71322.1|3234543_3235500_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ71323.1|3235683_3236349_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2I7S903	Vibrio_phage	35.9	7.0e-24
3236302:3236317	attR	GGCGGCTGAATCCATG	NA	NA	NA	NA
