The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033909	Mycobacterium avium subsp. paratuberculosis strain MAPK_JJ1/13 chromosome, complete genome	4838649	366359	431087	4838649	tRNA,protease,transposase,holin	uncultured_Mediterranean_phage(17.65%)	59	NA	NA
AZB40532.1|366359_367553_+|protease	serine protease	protease	A0A1B1IRH0	uncultured_Mediterranean_phage	25.0	2.6e-05
AZB36831.1|367545_368511_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZB36832.1|368511_369051_-|holin	phage holin family protein	holin	NA	NA	NA	NA
AZB36833.1|369271_369943_+|protease	serine protease	protease	NA	NA	NA	NA
AZB40533.1|370034_371987_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	39.4	5.8e-87
AZB36834.1|372101_372644_+	DUF4232 domain-containing protein	NA	NA	NA	NA	NA
AZB36835.1|372728_374354_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZB36836.1|374355_375282_+	ABC transporter permease	NA	NA	NA	NA	NA
AZB36837.1|375274_376150_+	ABC transporter permease	NA	NA	NA	NA	NA
AZB40534.1|376146_377793_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.0	8.0e-13
AZB36838.1|377782_378541_+	oxidoreductase	NA	NA	NA	NA	NA
AZB36839.1|379006_379864_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZB36840.1|380376_381432_+	helicase	NA	NA	NA	NA	NA
AZB36841.1|381428_382604_+	TadA family conjugal transfer-associated ATPase	NA	NA	NA	NA	NA
AZB36842.1|382600_383404_+	hypothetical protein	NA	NA	NA	NA	NA
AZB40535.1|383426_384014_+	type II secretion system F family protein	NA	NA	NA	NA	NA
AZB36843.1|384032_384233_+	DUF4244 domain-containing protein	NA	NA	NA	NA	NA
AZB40537.1|384292_384559_+	pilus biosynthesis protein TadE	NA	NA	NA	NA	NA
AZB40536.1|384515_384884_+	helicase	NA	NA	NA	NA	NA
AZB36844.1|384880_385918_-	hypothetical protein	NA	NA	NA	NA	NA
AZB36845.1|386049_388380_-	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	27.1	5.1e-05
AZB40538.1|388628_388832_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	56.2	2.0e-14
AZB36846.1|389020_389611_+	hypothetical protein	NA	NA	NA	NA	NA
AZB36847.1|389815_392614_+	type I DNA topoisomerase	NA	A0A2K9L5F8	Tupanvirus	30.4	1.2e-98
AZB36848.1|392610_394272_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A1B1IWY2	uncultured_Mediterranean_phage	32.8	8.4e-18
AZB36849.1|394369_395575_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AZB36850.1|395802_396990_+|transposase	IS481-like element ISMav5 family transposase	transposase	NA	NA	NA	NA
AZB36851.1|397144_398953_-	hypothetical protein	NA	NA	NA	NA	NA
AZB36852.1|398918_399860_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9L0I7	Tupanvirus	34.8	2.7e-37
AZB36853.1|399856_400198_-	DUF2304 domain-containing protein	NA	NA	NA	NA	NA
AZB36854.1|400194_400896_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZB36855.1|400931_402182_-	hypothetical protein	NA	NA	NA	NA	NA
AZB36856.1|402309_403398_+	DUF475 domain-containing protein	NA	A0A172Q0Y5	Acinetobacter_phage	41.3	1.1e-53
AZB36857.1|403378_403867_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	45.1	9.6e-31
AZB36858.1|403988_405374_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZB36859.1|405370_406444_+	hydrolase	NA	NA	NA	NA	NA
AZB36860.1|406422_407385_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
AZB36861.1|407390_408047_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	26.4	2.2e-06
AZB36862.1|408054_408804_-	DUF541 domain-containing protein	NA	NA	NA	NA	NA
AZB36863.1|409120_409420_+	PE family protein	NA	NA	NA	NA	NA
AZB36864.1|412183_413197_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZB36865.1|413196_414384_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AZB36866.1|414380_415310_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZB36867.1|415449_415863_+	VOC family protein	NA	NA	NA	NA	NA
AZB36868.1|415897_416122_+	hypothetical protein	NA	NA	NA	NA	NA
AZB36869.1|416135_418535_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5EQU5	Bathycoccus_sp._RCC1105_virus	44.9	4.3e-108
AZB36870.1|418551_419166_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	53.9	6.6e-45
AZB36871.1|419185_419989_+	dihydropteroate synthase	NA	S4W084	Pandoravirus	33.0	3.9e-21
AZB36872.1|419981_420383_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZB36873.1|420491_421040_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZB36874.1|421039_421516_+	DUF3180 domain-containing protein	NA	NA	NA	NA	NA
AZB36875.1|421603_422992_+	hypothetical protein	NA	NA	NA	NA	NA
AZB36876.1|423107_424019_+	DUF2520 domain-containing protein	NA	NA	NA	NA	NA
AZB36877.1|424015_424942_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZB36878.1|424941_425373_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
AZB36879.1|425375_426191_+	type III pantothenate kinase	NA	NA	NA	NA	NA
AZB36880.1|426237_427737_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	36.6	3.3e-74
AZB36881.1|427880_428219_+	Lsr2 family protein	NA	A0A2D1GPL8	Mycobacterium_phage	41.5	2.1e-16
AZB36882.1|428555_431087_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.7	3.0e-128
>prophage 2
CP033909	Mycobacterium avium subsp. paratuberculosis strain MAPK_JJ1/13 chromosome, complete genome	4838649	3394812	3401384	4838649		Bacillus_phage(33.33%)	8	NA	NA
AZB39292.1|3394812_3396978_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.6	5.7e-208
AZB39293.1|3396947_3397400_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	37.7	3.7e-13
AZB39294.1|3397442_3397682_-	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	64.5	2.0e-21
AZB39295.1|3397757_3398024_-	hypothetical protein	NA	NA	NA	NA	NA
AZB39296.1|3398211_3398766_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	33.6	5.4e-06
AZB39297.1|3398859_3399474_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZB39298.1|3399473_3400517_+	DNA polymerase IV	NA	F1C5A5	Cronobacter_phage	27.9	1.1e-18
AZB39299.1|3400451_3401384_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.9	5.9e-05
