The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027715	Pseudomonas chlororaphis subsp. aurantiaca strain M12 chromosome, complete genome	6730980	1304046	1393347	6730980	plate,tRNA,tail,protease	Pseudomonas_phage(42.0%)	92	NA	NA
AZD20511.1|1304046_1305399_+|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	protease	NA	NA	NA	NA
AZD20512.1|1305473_1307861_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA	NA
AZD20513.1|1307906_1308410_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA	NA
AZD20514.1|1308413_1309469_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZD20515.1|1309578_1310019_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZD20516.1|1310015_1310792_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZD20517.1|1310794_1311925_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZD20518.1|1311936_1312569_+	Ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	38.9	1.7e-27
AZD20519.1|1312638_1316163_+	DNA polymerase III alpha subunit	NA	A0A2L1IZ23	Streptomyces_phage	38.0	8.1e-196
AZD20520.1|1316303_1317251_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA	NA
AZD20521.1|1318742_1318886_+	hypothetical protein	NA	NA	NA	NA	NA
AZD20522.1|1318971_1320603_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.5	6.9e-158
AZD20523.1|1320608_1321454_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.8	1.2e-49
AZD20524.1|1321611_1322901_+	Enolase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	9.0e-137
AZD20525.1|1323073_1323352_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA	NA
AZD20526.1|1323348_1324056_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AZD20527.1|1324217_1325114_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA	NA
AZD20528.1|1325220_1326333_+	S-(hydroxymethyl)glutathione dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.2	2.4e-29
AZD20529.1|1326421_1327267_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AZD20530.1|1327319_1327793_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AZD20531.1|1327789_1328848_+|tRNA	tRNA pseudouridine(13) synthase	tRNA	NA	NA	NA	NA
AZD20532.1|1328835_1329585_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.6	1.4e-68
AZD20533.1|1329584_1330262_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	6.8e-43
AZD20534.1|1330471_1331305_+	Murein hydrolase activator NlpD	NA	A0A0S2SXL7	Bacillus_phage	33.3	6.3e-06
AZD20535.1|1331411_1332416_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
AZD20536.1|1332917_1333241_-	4Fe-4S dicluster domain	NA	NA	NA	NA	NA
AZD20537.1|1333383_1335963_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.5	3.1e-27
AZD20538.1|1336159_1336885_+	Transcriptional regulator	NA	B5TK58	Pseudomonas_phage	91.8	1.5e-125
AZD20539.1|1337624_1338206_+	hypothetical protein	NA	NA	NA	NA	NA
AZD20540.1|1338308_1338656_+	Holin	NA	B5TK61	Pseudomonas_phage	87.7	7.7e-51
AZD20541.1|1338822_1339587_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	26.3	1.2e-06
AZD20542.1|1339809_1340334_+	hypothetical protein	NA	NA	NA	NA	NA
AZD20543.1|1340337_1340946_+|plate	Baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	59.7	8.2e-48
AZD20544.1|1340959_1341292_+|plate	Baseplate assembly protein W	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	2.1e-37
AZD20545.1|1341288_1342284_+|plate	Phage-related baseplate assembly protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	62.3	3.1e-108
AZD20546.1|1342280_1343015_+|tail	Phage tail fiber	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	51.4	1.5e-40
AZD20547.1|1343011_1343542_+|tail	Phage tail fiber	tail	A2I2X8	Vibrio_virus	63.1	6.9e-51
AZD20548.1|1343694_1344312_+	hypothetical protein	NA	NA	NA	NA	NA
AZD20549.1|1344482_1344659_-	hypothetical protein	NA	NA	NA	NA	NA
AZD20550.1|1344657_1344879_+	hypothetical protein	NA	NA	NA	NA	NA
AZD20551.1|1344881_1346048_+|tail	Major tail sheath protein	tail	B0ZSG8	Halomonas_phage	57.5	1.1e-125
AZD20552.1|1346047_1346554_+	hypothetical protein	NA	Q6R4W3	Vibrio_virus	35.7	2.0e-23
AZD20553.1|1346681_1347263_+	hypothetical protein	NA	B0ZSH0	Halomonas_phage	39.4	9.1e-28
AZD20554.1|1347259_1347385_+	hypothetical protein	NA	NA	NA	NA	NA
AZD20555.1|1347391_1349656_+	Phage protein	NA	A0A2H4JAA5	uncultured_Caudovirales_phage	40.5	4.8e-08
AZD20556.1|1349655_1350039_+|tail	Unclassified tail protein	tail	A0A2H4JAC8	uncultured_Caudovirales_phage	53.5	4.7e-33
AZD20557.1|1350031_1350244_+|tail	P2-like prophage tail protein X	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	68.6	3.9e-21
AZD20558.1|1350253_1351273_+|tail	Phage tail protein D	tail	A0A2H4JH05	uncultured_Caudovirales_phage	56.8	1.6e-104
AZD20559.1|1351453_1352038_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	71.5	1.2e-75
AZD20560.1|1352034_1352217_+	Mu-like prophage FluMu protein GP38	NA	B5TK66	Pseudomonas_phage	93.3	6.5e-25
AZD20561.1|1352216_1353713_+|tail	Bacteriophage tail sheath protein	tail	B5TK67	Pseudomonas_phage	90.8	7.8e-257
AZD20562.1|1353779_1354127_+|tail	Phage tail tube protein	tail	B5TK68	Pseudomonas_phage	93.9	2.9e-58
AZD20563.1|1354123_1354420_+|tail	Phage small tail protein E	tail	B5TK69	Pseudomonas_phage	94.9	2.3e-43
AZD20564.1|1354550_1356626_+|tail	Phage tail length tape-measure protein	tail	B5TK70	Pseudomonas_phage	48.1	2.0e-37
AZD20565.1|1356612_1357851_+|tail	Phage tail/DNA circulation protein	tail	B5TK71	Pseudomonas_phage	75.7	5.7e-181
AZD20566.1|1357854_1358895_+|tail	Prophage tail protein	tail	B5TK72	Pseudomonas_phage	82.7	3.8e-162
AZD20567.1|1358959_1359469_+|plate	Prophage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	89.3	4.4e-79
AZD20568.1|1359468_1359867_+	Bacteriophage protein GP46	NA	B5TK74	Pseudomonas_phage	89.4	1.7e-65
AZD20569.1|1359856_1360897_+	Phage FluMu protein gp47	NA	B5TK75	Pseudomonas_phage	87.9	8.0e-168
AZD20570.1|1360884_1361484_+|tail	Prophage tail protein	tail	B5TK76	Pseudomonas_phage	92.0	3.8e-106
AZD20571.1|1361495_1362353_+|tail	Prophage tail fiber protein	tail	B5TK77	Pseudomonas_phage	76.4	1.5e-23
AZD20572.1|1362357_1362999_+	hypothetical protein	NA	B5TK78	Pseudomonas_phage	61.9	2.5e-39
AZD20573.1|1363197_1363329_-	hypothetical protein	NA	NA	NA	NA	NA
AZD20574.1|1363382_1364936_+|tail	Prophage tail fiber protein	tail	A4PE45	Ralstonia_virus	54.2	1.8e-38
AZD20575.1|1364937_1365408_+	hypothetical protein	NA	A0A2H4EXG4	Aeromonas_phage	35.0	1.4e-07
AZD20576.1|1365802_1366885_+|tail	Prophage tail fiber protein	tail	B5TK79	Pseudomonas_phage	56.3	4.2e-111
AZD20577.1|1366892_1367495_+	Tail fiber assembly protein	NA	B5TK80	Pseudomonas_phage	49.7	8.2e-48
AZD20578.1|1367516_1368080_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	83.3	9.9e-88
AZD20579.1|1368061_1368598_+	hypothetical protein	NA	B5TK84	Pseudomonas_phage	73.0	4.0e-62
AZD20580.1|1368680_1369181_+	Nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	86.7	3.6e-73
AZD20581.1|1369264_1370317_+	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	60.9	4.4e-113
AZD20582.1|1370325_1370793_+	Regulatory protein RecX	NA	NA	NA	NA	NA
AZD20583.1|1370838_1371954_-	Decarboxylase family protein	NA	NA	NA	NA	NA
AZD20584.1|1372437_1372632_+	hypothetical protein	NA	NA	NA	NA	NA
AZD20585.1|1372633_1373056_-	Putative NADPH-quinone reductase (modulator of drug activity B)	NA	NA	NA	NA	NA
AZD20586.1|1373245_1373956_+	putative conserved protein YfiP, contains DTW domain	NA	NA	NA	NA	NA
AZD20587.1|1374291_1374942_+	Transcriptional regulator, LuxR family	NA	NA	NA	NA	NA
AZD20588.1|1375017_1375380_+	Diacylglycerol kinase	NA	NA	NA	NA	NA
AZD20589.1|1375376_1376303_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZD20590.1|1376436_1377216_+	Ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
AZD20591.1|1377288_1378017_-	S-adenosylmethionine-dependent methyltransferase YaeB	NA	NA	NA	NA	NA
AZD20592.1|1378105_1378876_-	Rhamnolipid biosynthesis 3-oxoacyl-ACP reductase RhlG	NA	NA	NA	NA	NA
AZD20593.1|1379009_1379471_-	Uncharacterized protein YehS	NA	Q9EYF4	Enterobacteria_phage	51.3	8.5e-37
AZD20594.1|1379537_1380248_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA	NA
AZD20595.1|1380330_1380804_-	Acetyltransferase	NA	NA	NA	NA	NA
AZD20596.1|1380910_1382248_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA	NA
AZD20597.1|1382579_1384481_+	Kup system potassium uptake protein	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	35.0	1.2e-76
AZD20598.1|1384684_1385980_-	Alanylphosphatidylglycerol hydrolase, periplasmic	NA	NA	NA	NA	NA
AZD20599.1|1385979_1388628_-	Alanylphosphatidylglycerol synthase	NA	NA	NA	NA	NA
AZD20600.1|1389566_1390631_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZD20601.1|1390660_1391614_-	putative lipoprotein	NA	NA	NA	NA	NA
AZD20602.1|1391631_1393347_-|tRNA	Prolyl-tRNA synthetase, bacterial type	tRNA	NA	NA	NA	NA
>prophage 2
CP027715	Pseudomonas chlororaphis subsp. aurantiaca strain M12 chromosome, complete genome	6730980	4231494	4237752	6730980	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
AZD23151.1|4231494_4231887_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	tRNA	A0A2H4JA39	uncultured_Caudovirales_phage	84.6	6.7e-59
AZD23152.1|4231890_4232253_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	tRNA	A0A2H4J8C0	uncultured_Caudovirales_phage	74.2	7.3e-44
AZD23153.1|4232252_4232552_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	tRNA	A0A2H4JG28	uncultured_Caudovirales_phage	68.7	9.0e-32
AZD23154.1|4232548_4232884_+|tRNA	tRNA 2-thiouridine synthesis protein TusE	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	82.0	1.9e-46
AZD23155.1|4232880_4233882_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	84.7	6.1e-165
AZD23156.1|4233970_4234978_+	Glutathione S-transferase, omega	NA	NA	NA	NA	NA
AZD23157.1|4235076_4236471_-	Precorrin-2 oxidase	NA	NA	NA	NA	NA
AZD23158.1|4236471_4237752_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.8	1.4e-100
