The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027748	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzS23 chromosome, complete genome	6756093	1302804	1398033	6756093	protease,plate,tRNA,tail	Pseudomonas_phage(36.73%)	94	NA	NA
AZE15633.1|1302804_1304157_+|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	protease	NA	NA	NA	NA
AZE15634.1|1304231_1306619_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA	NA
AZE15635.1|1306664_1307168_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA	NA
AZE15636.1|1307171_1308227_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZE15637.1|1308336_1308777_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZE15638.1|1308773_1309550_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZE15639.1|1309552_1310683_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZE15640.1|1310694_1311327_+	Ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	38.9	1.7e-27
AZE15641.1|1311396_1314921_+	DNA polymerase III alpha subunit	NA	A0A2L1IZ23	Streptomyces_phage	38.0	1.4e-195
AZE15642.1|1315061_1316009_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA	NA
AZE15643.1|1316128_1317457_+|tRNA	tRNA(Ile)-lysidine synthetase	tRNA	NA	NA	NA	NA
AZE15644.1|1317502_1317646_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15645.1|1317731_1319363_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.5	6.9e-158
AZE15646.1|1319368_1320214_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.8	1.2e-49
AZE15647.1|1320371_1321661_+	Enolase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	9.0e-137
AZE15648.1|1321833_1322112_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA	NA
AZE15649.1|1322108_1322816_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AZE15650.1|1322985_1323882_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA	NA
AZE15651.1|1323988_1325101_+	S-(hydroxymethyl)glutathione dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.2	8.3e-30
AZE15652.1|1325189_1326035_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AZE15653.1|1326556_1327615_+|tRNA	tRNA pseudouridine(13) synthase	tRNA	NA	NA	NA	NA
AZE15654.1|1327602_1328352_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.6	1.4e-68
AZE15655.1|1328351_1329029_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	6.8e-43
AZE15656.1|1329319_1330072_+	Murein hydrolase activator NlpD	NA	A0A0S2SXL7	Bacillus_phage	33.3	5.7e-06
AZE15657.1|1330178_1331183_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
AZE15658.1|1331683_1332007_-	4Fe-4S dicluster domain	NA	NA	NA	NA	NA
AZE15659.1|1332149_1334729_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.5	3.1e-27
AZE15660.1|1334925_1335651_+	Transcriptional regulator	NA	B5TK58	Pseudomonas_phage	91.4	1.3e-124
AZE15661.1|1336391_1336973_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15662.1|1337075_1337423_+	Holin	NA	B5TK61	Pseudomonas_phage	87.7	1.0e-50
AZE15663.1|1337589_1338354_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	26.3	2.0e-06
AZE15664.1|1338575_1339100_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15665.1|1339103_1339712_+|plate	Baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	59.7	8.2e-48
AZE15666.1|1339725_1340058_+|plate	Baseplate assembly protein W	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	2.1e-37
AZE15667.1|1340054_1341050_+|plate	Phage-related baseplate assembly protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	62.6	1.8e-108
AZE15668.1|1341046_1341781_+|tail	Phage tail fiber	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	51.4	1.3e-39
AZE15669.1|1341777_1342314_+|tail	Phage tail fiber	tail	A2I2X8	Vibrio_virus	62.1	1.0e-49
AZE15670.1|1342417_1343170_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15671.1|1343181_1343418_+	hypothetical protein	NA	M4NK32	Synechococcus_phage	40.0	9.7e-05
AZE15672.1|1343505_1343727_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15673.1|1343729_1344896_+|tail	Major tail sheath protein	tail	B0ZSG8	Halomonas_phage	57.5	1.1e-125
AZE15674.1|1344895_1345402_+	hypothetical protein	NA	Q6R4W3	Vibrio_virus	35.7	2.0e-23
AZE15675.1|1345529_1346141_+	hypothetical protein	NA	B0ZSH0	Halomonas_phage	36.4	2.0e-25
AZE15676.1|1346137_1346263_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15677.1|1346269_1348477_+	Phage protein	NA	A0A2H4JAA5	uncultured_Caudovirales_phage	48.0	2.1e-08
AZE15678.1|1348476_1348860_+|tail	Unclassified tail protein	tail	A0A2H4JAC8	uncultured_Caudovirales_phage	59.8	4.0e-40
AZE15679.1|1348852_1349065_+|tail	P2-like prophage tail protein X	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	61.4	6.9e-18
AZE15680.1|1349074_1350091_+|tail	Phage tail protein D	tail	A0A2H4JH05	uncultured_Caudovirales_phage	56.6	1.0e-106
AZE15681.1|1350233_1350818_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	72.0	6.9e-76
AZE15682.1|1350814_1350997_+	Mu-like prophage FluMu protein GP38	NA	B5TK66	Pseudomonas_phage	93.3	6.5e-25
AZE15683.1|1350996_1352493_+|tail	Bacteriophage tail sheath protein	tail	B5TK67	Pseudomonas_phage	90.8	7.8e-257
AZE15684.1|1352559_1352907_+|tail	Phage tail tube protein	tail	B5TK68	Pseudomonas_phage	93.9	2.9e-58
AZE15685.1|1352903_1353200_+|tail	Phage small tail protein E	tail	B5TK69	Pseudomonas_phage	94.9	2.3e-43
AZE15686.1|1353330_1355085_+|tail	Phage tail length tape-measure protein	tail	B5TK70	Pseudomonas_phage	53.7	1.5e-41
AZE15687.1|1356312_1357353_+|tail	Prophage tail protein	tail	B5TK72	Pseudomonas_phage	82.7	3.8e-162
AZE15688.1|1357386_1357980_+|plate	Prophage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	88.8	2.0e-78
AZE15689.1|1357979_1358378_+	Bacteriophage protein GP46	NA	B5TK74	Pseudomonas_phage	88.6	4.8e-65
AZE15690.1|1358367_1359408_+	Phage FluMu protein gp47	NA	B5TK75	Pseudomonas_phage	87.3	1.4e-167
AZE15691.1|1359395_1359995_+|tail	Prophage tail protein	tail	B5TK76	Pseudomonas_phage	91.0	2.5e-105
AZE15692.1|1360140_1360845_+|tail	Prophage tail fiber protein	tail	A0A2R3UAP8	Myoviridae_environmental_samples	72.8	7.7e-05
AZE15693.1|1360866_1361508_+	hypothetical protein	NA	B5TK78	Pseudomonas_phage	61.9	5.1e-40
AZE15694.1|1361891_1363151_+|tail	Prophage tail fiber protein	tail	A4PE45	Ralstonia_virus	53.0	9.4e-38
AZE15695.1|1363445_1363916_+	hypothetical protein	NA	A0A2H4EXG4	Aeromonas_phage	35.0	5.5e-07
AZE15696.1|1364060_1364240_-	hypothetical protein	NA	NA	NA	NA	NA
AZE15697.1|1364308_1365391_+|tail	Prophage tail fiber protein	tail	B5TK79	Pseudomonas_phage	56.6	1.4e-111
AZE15698.1|1365854_1365968_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15699.1|1366021_1366585_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	84.4	8.9e-89
AZE15700.1|1366566_1367103_+	hypothetical protein	NA	B5TK84	Pseudomonas_phage	71.3	3.4e-61
AZE15701.1|1367185_1367686_+	Nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	86.7	6.1e-73
AZE15702.1|1367769_1368822_+	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	60.9	3.3e-113
AZE15703.1|1369057_1369297_+	Regulatory protein RecX	NA	NA	NA	NA	NA
AZE15704.1|1369342_1370458_-	Decarboxylase family protein	NA	NA	NA	NA	NA
AZE15705.1|1370941_1371136_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15706.1|1371137_1371560_-	Putative NADPH-quinone reductase (modulator of drug activity B)	NA	NA	NA	NA	NA
AZE15707.1|1371749_1372460_+	putative conserved protein YfiP, contains DTW domain	NA	NA	NA	NA	NA
AZE15708.1|1372793_1373444_+	Transcriptional regulator, LuxR family	NA	NA	NA	NA	NA
AZE15709.1|1373520_1373883_+	Diacylglycerol kinase	NA	NA	NA	NA	NA
AZE15710.1|1373879_1374806_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZE15711.1|1374939_1375719_+	Ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
AZE15712.1|1375791_1376487_-	S-adenosylmethionine-dependent methyltransferase YaeB	NA	NA	NA	NA	NA
AZE15713.1|1377476_1377938_-	Uncharacterized protein YehS	NA	Q9EYF4	Enterobacteria_phage	51.3	8.5e-37
AZE15714.1|1378004_1378715_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA	NA
AZE15715.1|1378797_1379271_-	Acetyltransferase	NA	NA	NA	NA	NA
AZE15716.1|1379377_1380700_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA	NA
AZE15717.1|1380827_1381871_+	hypothetical protein	NA	NA	NA	NA	NA
AZE15718.1|1382438_1383278_-	hypothetical protein	NA	NA	NA	NA	NA
AZE15719.1|1383290_1384400_-	hypothetical protein	NA	A0A0K2FHG0	Enterobacter_phage	33.8	4.1e-05
AZE15720.1|1385904_1385994_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA	NA
AZE15721.1|1388425_1388701_-	hypothetical protein	NA	NA	NA	NA	NA
AZE15722.1|1389198_1390494_-	Alanylphosphatidylglycerol hydrolase, periplasmic	NA	NA	NA	NA	NA
AZE15723.1|1390493_1393142_-	Alanylphosphatidylglycerol synthase	NA	NA	NA	NA	NA
AZE15724.1|1394080_1395145_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZE15725.1|1395346_1396300_-	putative lipoprotein	NA	NA	NA	NA	NA
AZE15726.1|1396317_1398033_-|tRNA	Prolyl-tRNA synthetase, bacterial type	tRNA	NA	NA	NA	NA
>prophage 2
CP027748	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzS23 chromosome, complete genome	6756093	3838071	3842687	6756093	integrase,tail	uncultured_Caudovirales_phage(85.71%)	8	3829796:3829810	3842800:3842814
3829796:3829810	attL	CGGAATCGAACCGGC	NA	NA	NA	NA
AZE17849.1|3838071_3838842_-	Dam modification methylase	NA	C7BGE1	Burkholderia_phage	65.9	3.2e-97
AZE17850.1|3839061_3839286_-	hypothetical protein	NA	NA	NA	NA	NA
AZE17851.1|3839556_3840108_-	Phage endolysin	NA	A0A2H4JHX4	uncultured_Caudovirales_phage	68.7	2.5e-67
AZE17852.1|3840131_3841184_-|tail	Phage tail protein D	tail	A0A2H4JBF6	uncultured_Caudovirales_phage	74.6	7.9e-147
AZE17853.1|3841240_3841447_-|tail	Phage tail protein	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	65.7	1.3e-18
AZE17854.1|3841551_3841911_-	Phage protein U	NA	A0A2H4J875	uncultured_Caudovirales_phage	64.2	3.3e-28
AZE17855.1|3841939_3842368_+|integrase	Phage-related integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	70.6	2.5e-43
AZE17856.1|3842390_3842687_+	Integrase	NA	A0A2H4JDJ8	uncultured_Caudovirales_phage	59.4	3.5e-20
3842800:3842814	attR	CGGAATCGAACCGGC	NA	NA	NA	NA
>prophage 3
CP027748	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzS23 chromosome, complete genome	6756093	4268498	4274756	6756093	tRNA	uncultured_Caudovirales_phage(85.71%)	9	NA	NA
AZE18203.1|4268498_4268891_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	tRNA	A0A2H4JA39	uncultured_Caudovirales_phage	84.6	6.7e-59
AZE18204.1|4268894_4269257_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	tRNA	A0A2H4J8C0	uncultured_Caudovirales_phage	75.0	1.9e-44
AZE18205.1|4269256_4269556_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	tRNA	A0A2H4JG28	uncultured_Caudovirales_phage	69.7	1.1e-32
AZE18206.1|4269552_4269888_+|tRNA	tRNA 2-thiouridine synthesis protein TusE	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	82.0	1.9e-46
AZE18207.1|4269884_4270421_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	84.5	2.3e-78
AZE18208.1|4270417_4270885_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	83.2	7.4e-73
AZE18209.1|4270974_4271982_+	Glutathione S-transferase, omega	NA	NA	NA	NA	NA
AZE18210.1|4272080_4273475_-	Precorrin-2 oxidase	NA	NA	NA	NA	NA
AZE18211.1|4273475_4274756_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.1	2.1e-101
>prophage 4
CP027748	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzS23 chromosome, complete genome	6756093	5640575	5651297	6756093	tail	Pseudomonas_phage(81.82%)	17	NA	NA
AZE19430.1|5640575_5641817_+	Integrase	NA	A0A1B0VMI6	Pseudomonas_phage	38.2	1.5e-64
AZE19431.1|5641991_5642873_+	hypothetical protein	NA	NA	NA	NA	NA
AZE19432.1|5643004_5643274_+	putative transcriptional regulator	NA	NA	NA	NA	NA
AZE19433.1|5643273_5643573_+	hypothetical protein	NA	NA	NA	NA	NA
AZE19434.1|5643569_5644250_+	Phage protein	NA	H6WRZ8	Salmonella_phage	58.7	1.2e-39
AZE19435.1|5644567_5644729_+	hypothetical protein	NA	A0A1B0VP73	Pseudomonas_phage	71.4	6.2e-11
AZE19436.1|5644725_5645016_+	hypothetical protein	NA	NA	NA	NA	NA
AZE19437.1|5645012_5645273_+	hypothetical protein	NA	NA	NA	NA	NA
AZE19438.1|5645269_5645485_+	hypothetical protein	NA	NA	NA	NA	NA
AZE19439.1|5645776_5646064_+	hypothetical protein	NA	A0A1B0VMJ4	Pseudomonas_phage	87.8	3.9e-40
AZE19440.1|5646056_5646284_+	hypothetical protein	NA	A0A1B0VRK9	Pseudomonas_phage	89.3	2.0e-31
AZE19441.1|5646280_5647162_+	DNA primase, phage-associated	NA	A0A1B0VML8	Pseudomonas_phage	86.3	5.1e-139
AZE19442.1|5647148_5648951_+	DNA primase, phage-associated	NA	A0A1B0VP75	Pseudomonas_phage	96.2	0.0e+00
AZE19443.1|5649286_5649601_+	hypothetical protein	NA	A0A1B0VML7	Pseudomonas_phage	76.7	2.3e-38
AZE19444.1|5649597_5650203_+	hypothetical protein	NA	A0A1B0VMK2	Pseudomonas_phage	53.5	4.5e-54
AZE19445.1|5650315_5650696_+	hypothetical protein	NA	A0A1B0VML3	Pseudomonas_phage	61.4	6.5e-35
AZE19446.1|5650706_5651297_+|tail	Phage tail assembly protein I	tail	A0A2H4J1H0	uncultured_Caudovirales_phage	62.5	2.2e-58
