assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003852005.1_ASM385200v1	CP027752	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR38 chromosome, complete genome	1	439063-439178	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL	Orphan	GGGCTCGTCGCTGTGAGCGTGATGAGCCCGGG	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL	NA|147aa|up_0|CP027752.1_438415_438856_+,NA|70aa|down_2|CP027752.1_442631_442841_-	NA|252aa|up_9|CP027752.1_430337_431093_+	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms]	NA|253aa|up_8|CP027752.1_431165_431924_-	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase	NA|437aa|up_7|CP027752.1_432087_433398_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|429aa|up_6|CP027752.1_433429_434716_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|510aa|up_5|CP027752.1_434852_436382_-	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|138aa|up_4|CP027752.1_436533_436947_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|85aa|up_3|CP027752.1_436948_437203_+	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	NA|161aa|up_2|CP027752.1_437259_437742_+	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|152aa|up_1|CP027752.1_437961_438417_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|147aa|up_0|CP027752.1_438415_438856_+	NA	NA|479aa|down_0|CP027752.1_439754_441191_-	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|362aa|down_1|CP027752.1_441187_442273_-	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|70aa|down_2|CP027752.1_442631_442841_-	NA	NA|48aa|down_3|CP027752.1_442848_442992_+	PRK08131, PRK08131, 3-oxoadipyl-CoA thiolase	NA|372aa|down_4|CP027752.1_443133_444249_+	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism]	NA|172aa|down_5|CP027752.1_444220_444736_-	pfam13511, DUF4124, Domain of unknown function (DUF4124)	NA|181aa|down_6|CP027752.1_444824_445367_-	PRK09269, PRK09269, chorismate mutase; Provisional	NA|678aa|down_7|CP027752.1_445453_447487_-	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown]	NA|469aa|down_8|CP027752.1_447648_449055_-	PRK09469, glnA, glutamate--ammonia ligase	NA|485aa|down_9|CP027752.1_449385_450840_+	PRK01269, PRK01269, tRNA s(4)U8 sulfurtransferase; Provisional
GCA_003852005.1_ASM385200v1	CP027752	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR38 chromosome, complete genome	2	3209829-3209986	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL	Orphan	GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGGGCAAGC	51	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL	NA,NA|36aa|down_5|CP027752.1_3215065_3215173_-,NA|177aa|down_6|CP027752.1_3215286_3215817_+,NA|44aa|down_9|CP027752.1_3218003_3218135_-	NA|723aa|up_9|CP027752.1_3195319_3197488_-	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|106aa|up_8|CP027752.1_3197601_3197919_-	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|929aa|up_7|CP027752.1_3197940_3200727_-	PRK14511, PRK14511, malto-oligosyltrehalose synthase	NA|698aa|up_6|CP027752.1_3200723_3202817_-	PRK14507, PRK14507, malto-oligosyltrehalose synthase	NA|599aa|up_5|CP027752.1_3202813_3204610_-	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase	NA|523aa|up_4|CP027752.1_3204624_3206193_-	PRK00654, glgA, glycogen synthase GlgA	NA|318aa|up_3|CP027752.1_3206680_3207634_-	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases	NA|342aa|up_2|CP027752.1_3207656_3208682_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|146aa|up_1|CP027752.1_3208815_3209253_-	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|156aa|up_0|CP027752.1_3209249_3209717_-	COG3019, COG3019, Predicted metal-binding protein [General function prediction only]	NA|305aa|down_0|CP027752.1_3210062_3210977_-	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism]	NA|128aa|down_1|CP027752.1_3210980_3211364_-	pfam04234, CopC, CopC domain	NA|310aa|down_2|CP027752.1_3211421_3212351_-	pfam05275, CopB, Copper resistance protein B precursor (CopB)	NA|611aa|down_3|CP027752.1_3212347_3214180_-	TIGR01480, unnamed_protein_product, copper-resistance protein, CopA family	NA|152aa|down_4|CP027752.1_3214302_3214758_-	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily	NA|36aa|down_5|CP027752.1_3215065_3215173_-	NA	NA|177aa|down_6|CP027752.1_3215286_3215817_+	NA	NA|332aa|down_7|CP027752.1_3215878_3216874_-	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|306aa|down_8|CP027752.1_3216993_3217911_+	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|44aa|down_9|CP027752.1_3218003_3218135_-	NA
GCA_003852005.1_ASM385200v1	CP027752	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR38 chromosome, complete genome	3	5568976-5569127	3	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL	Orphan	CCAAGGCCACCACGGACCTGTAGGAGCGAGGCTTGCCCGCGATAGCGGT	49	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL	NA,NA	NA|125aa|up_9|CP027752.1_5558311_5558686_+	PRK02971, PRK02971, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional	NA|133aa|up_8|CP027752.1_5558718_5559117_+	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional	NA|289aa|up_7|CP027752.1_5559246_5560113_-	pfam00487, FA_desaturase, Fatty acid desaturase	NA|261aa|up_6|CP027752.1_5560637_5561420_-	pfam06629, MipA, MltA-interacting protein MipA	NA|240aa|up_5|CP027752.1_5561650_5562370_+	cd07524, HAD_Pase, phosphatase, similar to Bacillus subtilis MtnX; belongs to the haloacid dehalogenase-like superfamily	NA|465aa|up_4|CP027752.1_5562362_5563757_+	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]	NA|294aa|up_3|CP027752.1_5563753_5564635_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|376aa|up_2|CP027752.1_5564649_5565777_+	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain	NA|596aa|up_1|CP027752.1_5565773_5567561_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|466aa|up_0|CP027752.1_5567557_5568955_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|345aa|down_0|CP027752.1_5569187_5570222_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|771aa|down_1|CP027752.1_5570589_5572902_-	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|306aa|down_2|CP027752.1_5573010_5573928_+	cd08441, PBP2_MetR, The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold	NA|170aa|down_3|CP027752.1_5573961_5574471_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|213aa|down_4|CP027752.1_5574510_5575149_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|128aa|down_5|CP027752.1_5575176_5575560_-	cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|91aa|down_6|CP027752.1_5575846_5576119_-	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|51aa|down_7|CP027752.1_5576391_5576544_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|540aa|down_8|CP027752.1_5576673_5578293_+	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain	NA|95aa|down_9|CP027752.1_5578361_5578646_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]
