The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027733	Pseudomonas sp. R4-39-08 chromosome, complete genome	5882212	1255410	1294164	5882212	plate,tail,tRNA	uncultured_Caudovirales_phage(30.43%)	47	NA	NA
AZF35899.1|1255410_1255881_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
AZF35900.1|1256020_1257064_-	Ferric iron ABC transporter, ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	37.1	3.3e-20
AZF35901.1|1257060_1257984_-	Ornithine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	27.4	2.7e-18
AZF35902.1|1258414_1260523_+	Formate dehydrogenase-O, major subunit	NA	A0A077SK27	Escherichia_phage	23.3	7.6e-24
AZF35903.1|1260622_1260961_+	Glutaredoxin-related protein	NA	NA	NA	NA	NA
AZF35904.1|1261158_1261629_-	Bacterioferritin	NA	NA	NA	NA	NA
AZF35905.1|1261829_1262048_-	Bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
AZF35906.1|1262293_1262896_+	Alkyl hydroperoxide reductase subunit C-like protein	NA	NA	NA	NA	NA
AZF35907.1|1262960_1263635_-	Ribonuclease T	NA	NA	NA	NA	NA
AZF35908.1|1263631_1264678_-	Dihydroorotase	NA	NA	NA	NA	NA
AZF35909.1|1264834_1265743_+	Sodium-type flagellar protein motY precursor	NA	NA	NA	NA	NA
AZF35910.1|1265872_1267090_+	Argininosuccinate synthase	NA	NA	NA	NA	NA
AZF35911.1|1267718_1268351_+	Two-component transcriptional response regulator, LuxR family	NA	NA	NA	NA	NA
AZF35912.1|1268438_1268621_-	hypothetical protein	NA	NA	NA	NA	NA
AZF35913.1|1268727_1269366_-	Endonuclease III	NA	NA	NA	NA	NA
AZF35914.1|1269435_1270410_-	Electron transport complex protein RnfB	NA	NA	NA	NA	NA
AZF35915.1|1270497_1272549_-|tRNA	Methionyl-tRNA synthetase	tRNA	NA	NA	NA	NA
AZF35916.1|1272721_1273816_+	[4Fe-4S] cluster assembly scaffold protein Mrp (ApbC)	NA	NA	NA	NA	NA
AZF35917.1|1274270_1274594_-	4Fe-4S dicluster domain	NA	NA	NA	NA	NA
AZF35918.1|1274736_1277328_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	21.5	9.6e-29
AZF35919.1|1277511_1277883_-	hypothetical protein	NA	NA	NA	NA	NA
AZF35920.1|1277875_1278364_-	GepA protein	NA	D0UIM3	Aggregatibacter_phage	44.5	6.4e-27
AZF35921.1|1278626_1279361_+	Transcriptional regulator	NA	B5TK58	Pseudomonas_phage	87.3	1.1e-118
AZF35922.1|1279339_1279495_+	hypothetical protein	NA	NA	NA	NA	NA
AZF35923.1|1279547_1279667_+	hypothetical protein	NA	NA	NA	NA	NA
AZF35924.1|1279950_1280289_+	Holin	NA	B5TK61	Pseudomonas_phage	81.8	2.8e-45
AZF35925.1|1280308_1280824_+	hypothetical protein	NA	NA	NA	NA	NA
AZF35926.1|1280827_1281436_+|plate	Baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	52.3	1.1e-44
AZF35927.1|1281448_1281781_+|plate	Baseplate assembly protein W	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	1.0e-36
AZF35928.1|1281777_1282773_+|plate	Phage-related baseplate assembly protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	64.4	2.0e-112
AZF35929.1|1282769_1283408_+|tail	Phage tail fiber	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	52.5	2.5e-39
AZF35930.1|1283404_1283938_+|tail	Phage tail fiber protein	tail	B0ZSG1	Halomonas_phage	55.9	1.9e-48
AZF35931.1|1283964_1284585_+	hypothetical protein	NA	NA	NA	NA	NA
AZF35932.1|1284597_1284855_+	hypothetical protein	NA	A0A1L5C071	Aquamicrobium_phage	47.1	6.2e-05
AZF35933.1|1284943_1285117_+	hypothetical protein	NA	NA	NA	NA	NA
AZF35934.1|1285184_1286285_+|tail	Major tail sheath protein	tail	B0ZSG8	Halomonas_phage	58.2	3.6e-118
AZF35935.1|1286284_1286791_+	hypothetical protein	NA	Q6R4W3	Vibrio_virus	35.1	3.8e-22
AZF35936.1|1286843_1287425_+	hypothetical protein	NA	B0ZSH0	Halomonas_phage	37.7	5.9e-27
AZF35937.1|1287421_1287547_+	hypothetical protein	NA	NA	NA	NA	NA
AZF35938.1|1287553_1289773_+|tail	Phage tail length tape-measure protein	tail	NA	NA	NA	NA
AZF35939.1|1289772_1290156_+|tail	Unclassified tail protein	tail	B0ZSH2	Halomonas_phage	55.9	8.9e-32
AZF35940.1|1290148_1290361_+|tail	P2-like prophage tail protein X	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	65.7	4.0e-18
AZF35941.1|1290370_1291372_+|tail	Phage tail protein D	tail	A0A2H4JH05	uncultured_Caudovirales_phage	56.0	6.2e-101
AZF35942.1|1291394_1291952_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	71.6	2.3e-73
AZF35943.1|1291939_1292440_+	hypothetical protein	NA	A0A2H4IZW4	uncultured_Caudovirales_phage	59.1	1.1e-34
AZF35944.1|1292521_1293022_+	Nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	82.5	1.8e-69
AZF35945.1|1293105_1294164_+	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	62.4	2.4e-111
>prophage 2
CP027733	Pseudomonas sp. R4-39-08 chromosome, complete genome	5882212	1401839	1406827	5882212		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
AZF36049.1|1401839_1402589_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	49.4	2.1e-61
AZF36050.1|1402588_1403266_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.1	3.1e-43
AZF36051.1|1403475_1404312_+	Murein hydrolase activator NlpD	NA	A0A0S2SXL7	Bacillus_phage	32.4	1.8e-05
AZF36052.1|1404417_1405425_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	36.2	1.3e-34
AZF36053.1|1405663_1405873_-	Cold shock protein of CSP family	NA	Q9AZD3	Lactococcus_phage	66.7	2.2e-16
AZF36054.1|1406260_1406827_+	Deoxycytidine triphosphate deaminase	NA	S5VM63	Pseudomonas_phage	73.3	6.2e-74
>prophage 3
CP027733	Pseudomonas sp. R4-39-08 chromosome, complete genome	5882212	1524428	1614770	5882212	plate,protease,capsid,transposase,terminase,tail,tRNA	uncultured_Caudovirales_phage(61.22%)	110	NA	NA
AZF36173.1|1524428_1525868_+|protease	HtrA protease/chaperone protein	protease	A0A1B1IT49	uncultured_Mediterranean_phage	30.9	5.9e-28
AZF36174.1|1525935_1527369_-|protease	Exported zinc metalloprotease YfgC precursor	protease	NA	NA	NA	NA
AZF36175.1|1527464_1527704_+	Rhodanese-like domain protein	NA	NA	NA	NA	NA
AZF36176.1|1527723_1528197_-	Thiol peroxidase, Bcp-type	NA	NA	NA	NA	NA
AZF36177.1|1528207_1528768_-	Glycine cleavage system transcriptional antiactivator GcvR	NA	NA	NA	NA	NA
AZF36178.1|1529030_1529909_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AZF36179.1|1529926_1531042_+	Outer membrane beta-barrel assembly protein BamC	NA	NA	NA	NA	NA
AZF36180.1|1531046_1531805_+	Metal-dependent hydrolase of the beta-lactamase superfamily I	NA	NA	NA	NA	NA
AZF36181.1|1531832_1532546_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	A0A0E3HWF9	Synechococcus_phage	37.6	6.7e-41
AZF36182.1|1532814_1533108_-	mRNA interferase RelE	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	74.5	8.6e-35
AZF36183.1|1533097_1533337_-	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	87.3	3.6e-31
AZF36184.1|1533803_1535030_-	putative MFS-type transporter	NA	NA	NA	NA	NA
AZF36185.1|1535249_1535567_-	KluB	NA	A0A2R2Z2Y1	Escherichia_phage	40.6	1.5e-13
AZF36186.1|1535563_1535968_-	hypothetical protein	NA	A0A0N7C055	Escherichia_phage	51.2	2.8e-12
AZF36187.1|1536114_1537080_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZF36188.1|1537071_1537830_-	putative ABC transport system, periplasmic component	NA	NA	NA	NA	NA
AZF36189.1|1537826_1539134_-	metabolite/H symporter, major facilitator superfamily (MFS)	NA	Q6JIH2	Burkholderia_virus	35.5	6.3e-61
AZF36190.1|1539332_1539479_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36191.1|1539572_1540094_+	Threonine synthase	NA	NA	NA	NA	NA
AZF36192.1|1540211_1541135_+	Transcriptional regulator, LysR family	NA	NA	NA	NA	NA
AZF36193.1|1541217_1542159_-	Transcriptional regulator, LysR family	NA	NA	NA	NA	NA
AZF36194.1|1542297_1543485_-	putative MFS-type transporter	NA	NA	NA	NA	NA
AZF36195.1|1543576_1543690_-	hypothetical protein	NA	NA	NA	NA	NA
AZF36196.1|1543728_1544343_-	Rrf2-linked NADH-flavin reductase	NA	NA	NA	NA	NA
AZF36197.1|1544377_1545244_-	Metallo-beta-lactamase superfamily protein	NA	NA	NA	NA	NA
AZF36198.1|1545368_1546256_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZF36199.1|1546354_1546531_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36200.1|1546559_1547438_-	Transcriptional regulator PobR, AraC family	NA	NA	NA	NA	NA
AZF36201.1|1547616_1548810_+	P-hydroxybenzoate hydroxylase	NA	NA	NA	NA	NA
AZF36202.1|1548876_1550391_+	Drug resistance transporter, EmrB/QacA family	NA	NA	NA	NA	NA
AZF36203.1|1550524_1551349_-|transposase	Putative transposase InsK for insertion sequence element IS150	transposase	A0A1B1P773	Bacillus_phage	54.0	5.5e-79
AZF36204.1|1551345_1551888_-	Mobile element protein	NA	A0A1B1P776	Bacillus_phage	35.8	2.3e-17
AZF36205.1|1552524_1553181_-	Phage repressor	NA	A0A0A1IWY4	Pseudomonas_phage	69.3	1.7e-83
AZF36206.1|1553763_1554204_+	Phage protein	NA	A0A0A1IVF5	Pseudomonas_phage	78.9	2.2e-58
AZF36207.1|1554484_1556230_+|transposase	Phage transposase	transposase	A0A2H4JEQ4	uncultured_Caudovirales_phage	62.4	4.1e-209
AZF36208.1|1556254_1556974_+	Phage DNA transposition protein	NA	A0A2H4J809	uncultured_Caudovirales_phage	73.1	1.3e-95
AZF36209.1|1556977_1557589_+	hypothetical protein	NA	L7P7I3	Pseudomonas_phage	44.0	4.4e-33
AZF36210.1|1557585_1557966_+	Phage protein	NA	A0A0A1IWY8	Pseudomonas_phage	60.9	1.3e-30
AZF36211.1|1557949_1558273_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36212.1|1558284_1558905_+	Phage protein	NA	A0A0A1IVF8	Pseudomonas_phage	74.5	1.2e-81
AZF36213.1|1558906_1559185_+	host nuclease inhibitor protein	NA	A0A1C6ZDJ8	Pseudomonas_phage	50.0	6.0e-14
AZF36214.1|1559187_1559586_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36215.1|1559594_1559816_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36216.1|1559885_1560164_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36217.1|1560160_1560577_+	E16-related protein	NA	A0A2H4J581	uncultured_Caudovirales_phage	65.2	4.3e-40
AZF36218.1|1560573_1561011_+	putative transcription regulator	NA	A0A2H4J0B0	uncultured_Caudovirales_phage	51.7	4.9e-34
AZF36219.1|1561010_1561481_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36220.1|1561604_1561946_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36221.1|1561942_1562236_+	Glutamate synthase [NADPH] large chain	NA	A0A2H4JBL7	uncultured_Caudovirales_phage	64.8	3.6e-25
AZF36222.1|1562288_1562876_+	Phage lysin	NA	A0A2H4J9H7	uncultured_Caudovirales_phage	73.3	2.5e-86
AZF36223.1|1562872_1563493_+	putative lipoprotein	NA	A0A2H4JEG6	uncultured_Caudovirales_phage	43.1	1.8e-34
AZF36224.1|1563479_1563698_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36225.1|1563697_1564009_+	Phage protein	NA	A0A2H4J7V5	uncultured_Caudovirales_phage	57.3	1.6e-26
AZF36226.1|1564005_1564317_+	Phage protein	NA	A0A2H4JGU5	uncultured_Caudovirales_phage	68.6	3.9e-38
AZF36227.1|1564321_1564834_+|terminase	Phage terminase, small subunit	terminase	A0A2H4JD50	uncultured_Caudovirales_phage	73.8	9.3e-61
AZF36228.1|1564830_1566384_+|terminase	Phage terminase, large subunit	terminase	A0A2H4JF57	uncultured_Caudovirales_phage	81.2	2.8e-249
AZF36229.1|1566383_1567940_+	Mu-like prophage FluMu protein gp29	NA	A0A2H4JGA9	uncultured_Caudovirales_phage	75.7	3.3e-226
AZF36230.1|1567943_1568147_-	hypothetical protein	NA	NA	NA	NA	NA
AZF36231.1|1568240_1569518_+	Phage (Mu-like) virion morphogenesis protein	NA	A0A2H4IYU7	uncultured_Caudovirales_phage	63.8	2.1e-162
AZF36232.1|1569527_1570010_+	phage virion morphogenesis protein	NA	A0A2H4J9E5	uncultured_Caudovirales_phage	55.0	1.2e-41
AZF36233.1|1570163_1571198_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36234.1|1571341_1572244_+	Mu-like prophage I protein-like	NA	A0A2H4J9A2	uncultured_Caudovirales_phage	58.8	9.0e-91
AZF36235.1|1572270_1573164_+|capsid	Phage major capsid protein	capsid	A0SMP3	Pseudomonas_virus	59.8	3.0e-91
AZF36236.1|1573173_1573659_+	hypothetical protein	NA	A0A2H4J7W4	uncultured_Caudovirales_phage	55.3	1.9e-07
AZF36237.1|1573655_1574147_+	hypothetical protein	NA	A0A2H4JB66	uncultured_Caudovirales_phage	58.3	1.3e-48
AZF36238.1|1574146_1574713_+	hypothetical protein	NA	A0A2H4JEC0	uncultured_Caudovirales_phage	54.7	7.2e-54
AZF36239.1|1574712_1574904_+	hypothetical protein	NA	A0A2H4JED6	uncultured_Caudovirales_phage	52.3	2.2e-07
AZF36240.1|1574900_1576001_+|tail	Bacteriophage tail sheath protein	tail	A0A2H4JFT7	uncultured_Caudovirales_phage	72.7	1.3e-139
AZF36241.1|1576014_1576386_+	Transaldolase	NA	A0A2H4J9F8	uncultured_Caudovirales_phage	73.2	1.5e-47
AZF36242.1|1576390_1576777_+	hypothetical protein	NA	A0A2H4JD25	uncultured_Caudovirales_phage	71.7	2.4e-37
AZF36243.1|1576791_1576899_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36244.1|1576953_1579368_+	hypothetical protein	NA	A0A2H4J9Q8	uncultured_Caudovirales_phage	51.7	5.7e-201
AZF36245.1|1579364_1580735_+|tail	Phage tail/DNA circulation protein	tail	A0A2H4JGT4	uncultured_Caudovirales_phage	56.9	1.6e-139
AZF36246.1|1580718_1581858_+|tail	Prophage tail protein	tail	A0A2H4J9E6	uncultured_Caudovirales_phage	74.7	1.0e-163
AZF36247.1|1581858_1582401_+|plate	Prophage baseplate assembly protein V	plate	A0A2H4JFE0	uncultured_Caudovirales_phage	60.8	2.4e-59
AZF36248.1|1582482_1582833_+	Bacteriophage protein GP46	NA	A0A2H4JDR8	uncultured_Caudovirales_phage	66.1	1.1e-36
AZF36249.1|1582834_1583905_+	Phage FluMu protein gp47	NA	A0A2H4JC98	uncultured_Caudovirales_phage	42.3	8.5e-72
AZF36250.1|1583901_1584477_+|tail	Prophage tail protein	tail	F6MIL7	Haemophilus_phage	32.9	3.4e-11
AZF36251.1|1584476_1585619_+|tail	Phage tail fiber protein	tail	NA	NA	NA	NA
AZF36252.1|1585638_1586058_+|tail	Phage tail fiber protein	tail	U5P083	Shigella_phage	42.0	1.7e-20
AZF36253.1|1586473_1587313_-	Cytochrome c	NA	NA	NA	NA	NA
AZF36254.1|1587385_1588159_-	Prephenate/Arogenate dehydratase	NA	NA	NA	NA	NA
AZF36255.1|1588366_1588966_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZF36256.1|1589088_1590222_+	Ribonuclease D	NA	NA	NA	NA	NA
AZF36257.1|1590218_1590512_+	Protein YcgL	NA	NA	NA	NA	NA
AZF36258.1|1590620_1591553_+	D-3-phosphoglycerate dehydrogenase	NA	M1HTA3	Paramecium_bursaria_Chlorella_virus	28.1	6.8e-09
AZF36259.1|1591733_1592318_-	Nitroreductase family protein	NA	NA	NA	NA	NA
AZF36260.1|1592471_1592921_+	protein YcgN	NA	NA	NA	NA	NA
AZF36261.1|1592934_1594155_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36262.1|1594299_1594650_-	hypothetical protein	NA	NA	NA	NA	NA
AZF36263.1|1594717_1595185_-	RNA methyltransferase, TrmH family	NA	NA	NA	NA	NA
AZF36264.1|1595352_1595727_-	Uncharacterized protein YajD	NA	NA	NA	NA	NA
AZF36265.1|1595786_1596473_-	hypothetical protein	NA	NA	NA	NA	NA
AZF36266.1|1596551_1596830_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36267.1|1596826_1597300_-	Cyclic nucleotide-binding protein	NA	NA	NA	NA	NA
AZF36268.1|1597368_1599477_-	Protease II	NA	NA	NA	NA	NA
AZF36269.1|1599501_1599963_+	putative MFS-type transporter	NA	NA	NA	NA	NA
AZF36270.1|1599993_1600770_+	Putative glutamine amidotransferase YafJ	NA	NA	NA	NA	NA
AZF36271.1|1600780_1601323_+	hypothetical protein	NA	NA	NA	NA	NA
AZF36272.1|1602521_1603262_+	Lactam utilization protein LamB	NA	NA	NA	NA	NA
AZF36273.1|1603258_1603963_+	Allophanate hydrolase 2 subunit 1	NA	NA	NA	NA	NA
AZF36274.1|1603959_1604868_+	Allophanate hydrolase 2 subunit 2	NA	NA	NA	NA	NA
AZF36275.1|1604993_1606172_-	Thioredoxin reductase	NA	NA	NA	NA	NA
AZF36276.1|1606171_1607017_-	ATPase	NA	NA	NA	NA	NA
AZF36277.1|1607115_1608192_-	hypothetical protein	NA	NA	NA	NA	NA
AZF36278.1|1608318_1609293_+	Cysteine synthase	NA	A0A1X9I5F1	Streptococcus_phage	51.1	2.5e-70
AZF36279.1|1609432_1610368_+	Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO	NA	H8ZJK8	Ostreococcus_tauri_virus	38.6	1.1e-35
AZF36280.1|1610493_1613235_-	Aconitate hydratase	NA	NA	NA	NA	NA
AZF36281.1|1613426_1614503_+	23S rRNA (cytidine(2498)-2'-O)-methyltransferase	NA	NA	NA	NA	NA
AZF36282.1|1614524_1614770_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthesis sulfur carrier protein TusA	tRNA	NA	NA	NA	NA
>prophage 4
CP027733	Pseudomonas sp. R4-39-08 chromosome, complete genome	5882212	3148411	3208730	5882212	integrase,tail,capsid	uncultured_Caudovirales_phage(41.27%)	91	3133386:3133402	3207764:3207780
3133386:3133402	attL	GCCGGATCTGCTGGAGG	NA	NA	NA	NA
AZF37668.1|3148411_3149032_+|integrase	Phage integrase family protein	integrase	NA	NA	NA	NA
AZF37669.1|3149253_3150183_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
AZF37670.1|3150296_3151181_+	Transcriptional regulator	NA	NA	NA	NA	NA
AZF37671.1|3151329_3151836_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37672.1|3151937_3152846_-	Transcriptional regulator, LysR family	NA	NA	NA	NA	NA
AZF37673.1|3152940_3153069_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37674.1|3153107_3154052_+	Ammonia monooxygenase	NA	NA	NA	NA	NA
AZF37675.1|3154536_3154890_+	hypothetical protein	NA	A0A2H4IZV2	uncultured_Caudovirales_phage	65.0	1.3e-34
AZF37676.1|3154870_3155389_-	hypothetical protein	NA	A0A2H4IZW4	uncultured_Caudovirales_phage	77.8	2.9e-62
AZF37677.1|3155388_3155814_-	Cell wall hydrolase	NA	A0A2D1GNI1	Pseudomonas_phage	90.8	5.5e-75
AZF37678.1|3155872_3156085_-	hypothetical protein	NA	A0A1B0VMJ7	Pseudomonas_phage	67.1	1.3e-19
AZF37679.1|3156933_3157632_-	hypothetical protein	NA	A0A2D1GNS6	Pseudomonas_phage	37.3	3.7e-28
AZF37680.1|3157960_3161689_-|tail	Phage tail fiber protein	tail	A0A2H4J8Z6	uncultured_Caudovirales_phage	77.6	0.0e+00
AZF37681.1|3161746_3162328_-|tail	Phage tail assembly protein I	tail	A0A2H4J1H0	uncultured_Caudovirales_phage	90.7	2.0e-91
AZF37682.1|3162324_3163080_-|tail	Phage tail assembly protein	tail	A0A2H4J1J7	uncultured_Caudovirales_phage	92.8	4.5e-144
AZF37683.1|3163082_3163832_-|tail	Phage minor tail protein	tail	A0A2H4J4Q5	uncultured_Caudovirales_phage	96.4	1.5e-144
AZF37684.1|3163842_3164001_-|tail	Phage minor tail protein	tail	A0A2H4JI07	uncultured_Caudovirales_phage	98.1	4.3e-25
AZF37685.1|3164182_3167488_-|tail	Phage tail length tape-measure protein 1	tail	A0A2H4J9A1	uncultured_Caudovirales_phage	44.4	1.1e-149
AZF37686.1|3168493_3169420_-	putative antirepressor protein	NA	A0A2D1GLJ3	Escherichia_phage	49.0	8.2e-23
AZF37687.1|3169502_3169730_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37688.1|3169757_3170330_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37689.1|3170438_3170573_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37690.1|3170656_3170794_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37691.1|3170839_3170956_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37692.1|3171035_3171314_-	hypothetical protein	NA	A0A2H4J4F7	uncultured_Caudovirales_phage	52.4	2.4e-18
AZF37693.1|3171361_3171742_-	hypothetical protein	NA	A0A2H4IYQ5	uncultured_Caudovirales_phage	47.7	1.5e-23
AZF37694.1|3171745_3172402_-	putative phage protein	NA	A0A1B0VMG2	Pseudomonas_phage	87.6	2.3e-104
AZF37695.1|3172474_3172894_-	hypothetical protein	NA	A0A1B0VMI0	Pseudomonas_phage	73.5	2.2e-52
AZF37696.1|3172890_3173547_-	hypothetical protein	NA	A0A1B0VMI1	Pseudomonas_phage	90.4	2.8e-110
AZF37697.1|3173548_3173941_-	hypothetical protein	NA	A0A2H4IZB5	uncultured_Caudovirales_phage	66.9	5.7e-42
AZF37698.1|3173943_3174321_-	hypothetical protein	NA	A0A2H4J0N2	uncultured_Caudovirales_phage	72.8	1.3e-40
AZF37699.1|3174331_3174694_-	hypothetical protein	NA	A0A2D1GNQ9	Pseudomonas_phage	67.1	1.9e-23
AZF37700.1|3174738_3175779_-|capsid	Phage capsid protein	capsid	A0A0B4ZZG1	Achromobacter_phage	46.3	3.4e-78
AZF37701.1|3175785_3176583_-	hypothetical protein	NA	A0A2H4J0I7	uncultured_Caudovirales_phage	60.5	1.7e-69
AZF37702.1|3176610_3177096_-	phage-related conserved hypothetical protein	NA	A0A1B0VND3	Pseudomonas_phage	35.7	2.4e-21
AZF37703.1|3177104_3178151_-	Phage protein	NA	A0A2H4J3G9	uncultured_Caudovirales_phage	69.8	5.4e-132
AZF37704.1|3178134_3179595_-	structural protein	NA	A0A2H4J0H4	uncultured_Caudovirales_phage	80.1	3.5e-230
AZF37705.1|3179594_3180932_-	may containing ATP/GTP binding motif	NA	A0A2H4GY89	Pseudomonas_phage	70.3	1.1e-177
AZF37706.1|3180928_3181444_-	Phage protein	NA	A0A1B0VMH2	Pseudomonas_phage	84.3	4.8e-57
AZF37707.1|3181475_3182087_-	hypothetical protein	NA	A0A1B0VRJ1	Pseudomonas_phage	87.7	1.3e-104
AZF37708.1|3182064_3182526_-	hypothetical protein	NA	A0A1B0VNC4	Pseudomonas_phage	53.4	1.2e-30
AZF37709.1|3182522_3182714_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37710.1|3182710_3182932_-	hypothetical protein	NA	A0A2H4JFZ5	uncultured_Caudovirales_phage	83.1	3.3e-31
AZF37711.1|3182931_3183285_-	Phage protein	NA	A0A1I9SA29	Rhodococcus_phage	59.7	1.3e-37
AZF37712.1|3183337_3183682_-	hypothetical protein	NA	A0A193GYR7	Enterobacter_phage	36.2	4.0e-07
AZF37713.1|3183678_3184017_-	hypothetical protein	NA	A0A088FVG2	Escherichia_phage	47.3	2.0e-19
AZF37714.1|3184431_3185118_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37715.1|3185114_3185711_-	Protein NinG	NA	A0A059VA66	Pseudomonas_phage	56.6	6.2e-56
AZF37716.1|3185707_3185866_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37717.1|3185862_3186138_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37718.1|3186134_3186605_-	hypothetical protein	NA	A0A2H4J106	uncultured_Caudovirales_phage	59.0	1.0e-50
AZF37719.1|3186601_3186724_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37720.1|3186720_3186951_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37721.1|3186947_3187538_-	hypothetical protein	NA	A0A2H4J7V6	uncultured_Caudovirales_phage	60.0	1.4e-07
AZF37722.1|3187534_3188047_-	Phage HNH homing endonuclease	NA	Q7Y5K0	Xanthomonas_virus	45.1	1.8e-32
AZF37723.1|3188043_3188361_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37724.1|3188357_3188546_-	hypothetical protein	NA	A0A2H4J9M2	uncultured_Caudovirales_phage	69.4	1.1e-14
AZF37725.1|3188542_3189196_-	hypothetical protein	NA	A0A0S2SYE7	Pseudomonas_phage	45.8	1.1e-45
AZF37726.1|3189195_3190536_-	Replicative DNA helicase (DnaB)	NA	Q9MC54	Pseudomonas_phage	69.1	6.2e-173
AZF37727.1|3190532_3191540_-	Phage replication protein O	NA	A0A0S2SYI8	Pseudomonas_phage	56.8	1.1e-97
AZF37728.1|3191536_3191758_-	hypothetical protein	NA	NA	NA	NA	NA
AZF37729.1|3192109_3192304_-	hypothetical protein	NA	B5WZX7	Pseudomonas_phage	55.8	1.4e-06
AZF37730.1|3192333_3192573_-	regulator protein, putative	NA	A0A2H4J0V8	uncultured_Caudovirales_phage	70.9	7.2e-24
AZF37731.1|3192656_3193391_+	prophage MuSo1, transcriptional regulator, Cro/CI family	NA	A0A2H4J0J9	uncultured_Caudovirales_phage	62.0	3.6e-82
AZF37732.1|3193747_3194350_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37733.1|3194442_3194658_+	hypothetical protein	NA	A0A2D1GNR5	Pseudomonas_phage	77.5	2.2e-24
AZF37734.1|3195097_3195352_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37735.1|3195416_3195680_+	Phage protein	NA	Q6UYL7	Burkholderia_phage	67.4	5.5e-25
AZF37736.1|3196494_3196746_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37737.1|3196774_3196972_+	hypothetical protein	NA	A0A1B0VN94	Pseudomonas_phage	84.7	1.4e-25
AZF37738.1|3196993_3197293_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37739.1|3197307_3197736_+	hypothetical protein	NA	A0A2H4J9E7	uncultured_Caudovirales_phage	73.9	1.9e-51
AZF37740.1|3197732_3197945_+	hypothetical protein	NA	A0A2H4IZT6	uncultured_Caudovirales_phage	78.6	8.4e-24
AZF37741.1|3197941_3198079_+	hypothetical protein	NA	A0A1B0VMD4	Pseudomonas_phage	95.6	2.0e-18
AZF37742.1|3198075_3198621_+	hypothetical protein	NA	A0A0C7U2Q1	Pseudomonas_phage	36.2	1.0e-17
AZF37743.1|3199307_3199544_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37744.1|3199587_3200319_+	hypothetical protein	NA	A0A2H4J2D5	uncultured_Caudovirales_phage	65.4	3.6e-82
AZF37745.1|3200315_3200813_+	hypothetical protein	NA	H2BDF7	Pseudomonas_virus	63.6	2.2e-51
AZF37746.1|3200820_3201414_+	hypothetical protein	NA	A0A1B0VMB1	Pseudomonas_phage	63.1	4.1e-60
AZF37747.1|3201586_3201814_+	hypothetical protein	NA	A0A2H4JAQ1	uncultured_Caudovirales_phage	90.7	2.8e-33
AZF37748.1|3201871_3202351_+	Phage protein	NA	NA	NA	NA	NA
AZF37749.1|3202360_3202858_+	HNH homing endonuclease	NA	Q94MV4	Myxococcus_phage	42.6	1.9e-13
AZF37750.1|3203037_3203988_+	Phage protein	NA	B7SYG0	Stenotrophomonas_phage	49.2	9.2e-78
AZF37751.1|3204032_3204590_+	hypothetical protein	NA	I6NP82	Burkholderia_phage	34.5	2.4e-17
AZF37752.1|3204600_3204957_+	hypothetical protein	NA	A0A2H4J9C2	uncultured_Caudovirales_phage	48.8	9.2e-07
AZF37753.1|3205021_3205204_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37754.1|3205200_3206280_+	hypothetical protein	NA	B2ZY87	Ralstonia_phage	70.6	1.4e-42
AZF37755.1|3206326_3206641_+	hypothetical protein	NA	NA	NA	NA	NA
AZF37756.1|3206698_3207553_+	SAM-dependent methyltransferase	NA	Q5QF26	Pseudomonas_virus	50.0	4.7e-73
AZF37757.1|3207642_3207888_+	Phage protein	NA	W6MVE5	Pseudomonas_phage	63.0	2.2e-23
3207764:3207780	attR	GCCGGATCTGCTGGAGG	NA	NA	NA	NA
AZF37758.1|3207884_3208730_-	Shufflon-specific DNA recombinase	NA	B5WZU7	Pseudomonas_phage	64.4	1.1e-95
>prophage 5
CP027733	Pseudomonas sp. R4-39-08 chromosome, complete genome	5882212	3500713	3512042	5882212	tRNA	uncultured_Caudovirales_phage(55.56%)	14	NA	NA
AZF38032.1|3500713_3501538_-|tRNA	tRNA(Cytosine32)-2-thiocytidine synthetase	tRNA	A0A0U2S5Z2	Escherichia_phage	71.6	2.0e-105
AZF38033.1|3501833_3502436_+	Inner membrane protein YohC	NA	NA	NA	NA	NA
AZF38034.1|3502564_3503059_+	Protein SprT	NA	NA	NA	NA	NA
AZF38035.1|3503193_3503502_+	Transposase InsN for insertion sequence element IS911	NA	Q716C1	Shigella_phage	46.3	8.8e-14
AZF38036.1|3503642_3504341_+	Mobile element protein	NA	Q716C2	Shigella_phage	50.2	7.2e-56
AZF38037.1|3504405_3505581_-	Alpha-methylacyl-CoA racemase	NA	NA	NA	NA	NA
AZF38038.1|3505740_3506133_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	tRNA	A0A2H4JA39	uncultured_Caudovirales_phage	82.9	2.6e-55
AZF38039.1|3506134_3506485_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	tRNA	A0A2H4J8C0	uncultured_Caudovirales_phage	67.8	3.8e-37
AZF38040.1|3506484_3506763_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	tRNA	A0A2H4JG28	uncultured_Caudovirales_phage	57.6	2.9e-24
AZF38041.1|3506759_3507095_+|tRNA	tRNA 2-thiouridine synthesis protein TusE	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	73.0	1.7e-42
AZF38042.1|3507091_3508093_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	86.3	4.5e-168
AZF38043.1|3508181_3509177_+	Glutathione S-transferase, omega	NA	NA	NA	NA	NA
AZF38044.1|3509366_3510761_-	Precorrin-2 oxidase	NA	NA	NA	NA	NA
AZF38045.1|3510761_3512042_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.3	8.2e-98
