assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003932035.1_ASM393203v1	CP034276	Pectobacterium carotovorum strain 14A chromosome, complete genome	1	1492135-1492230	1	CRISPRCasFinder	no		cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	CCGCCATAAAAAACTGGAGCAATTTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA|110aa|down_4|CP034276.1_1496607_1496937_-,NA|126aa|down_7|CP034276.1_1500587_1500965_-	NA|369aa|up_9|CP034276.1_1482521_1483628_-	cd01139, TroA_f, Periplasmic binding protein TroA_f	NA|213aa|up_8|CP034276.1_1483903_1484542_-	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|346aa|up_7|CP034276.1_1484541_1485579_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|209aa|up_6|CP034276.1_1485916_1486543_+	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|430aa|up_5|CP034276.1_1486770_1488060_+	PRK10720, PRK10720, uracil transporter; Provisional	NA|236aa|up_4|CP034276.1_1488160_1488868_+	PRK08084, PRK08084, DnaA inactivator Hda	NA|124aa|up_3|CP034276.1_1488911_1489283_-	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|488aa|up_2|CP034276.1_1489297_1490761_-	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]	NA|156aa|up_1|CP034276.1_1490930_1491398_-	PRK09437, bcp, thioredoxin-dependent thiol peroxidase; Reviewed	NA|183aa|up_0|CP034276.1_1491473_1492022_-	PRK11589, gcvR, glycine cleavage system transcriptional repressor; Provisional	NA|293aa|down_0|CP034276.1_1492395_1493274_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|346aa|down_1|CP034276.1_1493290_1494328_+	PRK11679, PRK11679, outer membrane protein assembly factor BamC	NA|238aa|down_2|CP034276.1_1494471_1495185_+	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed	NA|370aa|down_3|CP034276.1_1495530_1496640_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|110aa|down_4|CP034276.1_1496607_1496937_-	NA	NA|151aa|down_5|CP034276.1_1497988_1498441_+	COG2707, COG2707, Predicted membrane protein [Function unknown]	NA|685aa|down_6|CP034276.1_1498458_1500513_+	COG1444, COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]	NA|126aa|down_7|CP034276.1_1500587_1500965_-	NA	NA|422aa|down_8|CP034276.1_1501154_1502420_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|141aa|down_9|CP034276.1_1502547_1502970_-	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]
GCA_003932035.1_ASM393203v1	CP034276	Pectobacterium carotovorum strain 14A chromosome, complete genome	2	2786844-2786938	2	CRISPRCasFinder	no		cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	ATGAATAAAATGCCAAAGGCATTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA|90aa|up_2|CP034276.1_2784353_2784623_+,NA|123aa|up_1|CP034276.1_2784829_2785198_-,NA	NA|202aa|up_9|CP034276.1_2774808_2775414_+	PRK00170, PRK00170, azoreductase; Reviewed	NA|78aa|up_8|CP034276.1_2775457_2775691_-	pfam13617, Lipoprotein_19, YnbE-like lipoprotein	NA|864aa|up_7|CP034276.1_2775706_2778298_-	PRK10695, PRK10695, YdbH family protein	NA|518aa|up_6|CP034276.1_2778670_2780224_+	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|518aa|up_5|CP034276.1_2780593_2782147_+	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|331aa|up_4|CP034276.1_2782258_2783251_+	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains	NA|97aa|up_3|CP034276.1_2783484_2783775_-	pfam03891, DUF333, Domain of unknown function (DUF333)	NA|90aa|up_2|CP034276.1_2784353_2784623_+	NA	NA|123aa|up_1|CP034276.1_2784829_2785198_-	NA	NA|312aa|up_0|CP034276.1_2785494_2786430_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|328aa|down_0|CP034276.1_2787221_2788205_-	PRK09546, zntB, zinc transporter ZntB	NA|539aa|down_1|CP034276.1_2788329_2789946_-	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|240aa|down_2|CP034276.1_2790110_2790830_+	PRK10602, PRK10602, murein tripeptide amidase MpaA	NA|168aa|down_3|CP034276.1_2790909_2791413_+	PRK00522, tpx, thiol peroxidase	NA|438aa|down_4|CP034276.1_2791469_2792783_-	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|706aa|down_5|CP034276.1_2792779_2794897_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|523aa|down_6|CP034276.1_2794947_2796516_-	PRK10820, PRK10820, transcriptional regulator TyrR	NA|515aa|down_7|CP034276.1_2796652_2798197_-	cd05678, M20_dipept_like, uncharacterized M20 dipeptidase	NA|348aa|down_8|CP034276.1_2798356_2799400_-	PRK05415, PRK05415, hypothetical protein; Provisional	NA|466aa|down_9|CP034276.1_2799396_2800794_-	COG3106, COG3106, Predicted ATPase [General function prediction only]
GCA_003932035.1_ASM393203v1	CP034276	Pectobacterium carotovorum strain 14A chromosome, complete genome	3	3944714-3944832	3	CRISPRCasFinder	no		cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	AAAAAACGTCAGGAGCGTTTTTCAACGTTGCGTAGCAACGGCCCG	45	1	1	3944759-3944787	CP034276.1_3944686-3944714	NA	1	1	Orphan	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA|69aa|up_7|CP034276.1_3934364_3934571_+,NA|66aa|down_3|CP034276.1_3949119_3949317_-	NA|330aa|up_9|CP034276.1_3932502_3933492_+	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain	NA|249aa|up_8|CP034276.1_3933500_3934247_+	PRK09730, PRK09730, SDR family oxidoreductase	NA|69aa|up_7|CP034276.1_3934364_3934571_+	NA	NA|380aa|up_6|CP034276.1_3934691_3935831_-	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]	NA|520aa|up_5|CP034276.1_3935874_3937434_-	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily	NA|297aa|up_4|CP034276.1_3937736_3938627_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|473aa|up_3|CP034276.1_3938922_3940341_+	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like	NA|226aa|up_2|CP034276.1_3940388_3941066_+	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein	NA|360aa|up_1|CP034276.1_3941151_3942231_-	cd01142, TroA_e, Periplasmic binding protein TroA_e	NA|734aa|up_0|CP034276.1_3942236_3944438_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|432aa|down_0|CP034276.1_3944964_3946260_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_1|CP034276.1_3946358_3947996_-	PRK05380, pyrG, CTP synthetase; Validated	NA|271aa|down_2|CP034276.1_3948222_3949035_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|66aa|down_3|CP034276.1_3949119_3949317_-	NA	NA|745aa|down_4|CP034276.1_3949422_3951657_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|450aa|down_5|CP034276.1_3951710_3953060_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|932aa|down_6|CP034276.1_3953177_3955973_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|382aa|down_7|CP034276.1_3956522_3957668_-	pfam02595, Gly_kinase, Glycerate kinase family	NA|295aa|down_8|CP034276.1_3957845_3958730_-	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|257aa|down_9|CP034276.1_3958819_3959590_-	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional
GCA_003932035.1_ASM393203v1	CP034276	Pectobacterium carotovorum strain 14A chromosome, complete genome	4	4057371-4057760	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Type I-F	GTTCACTGCCGTATAGGCAGCTTAGAAA,GTTCACTGCCGTATAGGCAGCTTAGAAA,GTTCACTGCCGTATAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	5,6,6	6	TypeI-F	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA|213aa|up_0|CP034276.1_4056271_4056910_+,NA|286aa|down_7|CP034276.1_4062640_4063498_-	NA|219aa|up_9|CP034276.1_4046045_4046702_+	COG3531, COG3531, Predicted protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|270aa|up_8|CP034276.1_4046904_4047714_+	sd00010, SLR, Sel1-like repeat	NA|260aa|up_7|CP034276.1_4047844_4048624_+	pfam14243, DUF4343, Domain of unknown function (DUF4343)	NA|341aa|up_6|CP034276.1_4048804_4049827_+	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA	NA|91aa|up_5|CP034276.1_4050005_4050278_+	PRK09459, pspG, envelope stress response protein PspG	NA|463aa|up_4|CP034276.1_4050744_4052133_-	pfam00067, p450, Cytochrome P450	NA|329aa|up_3|CP034276.1_4052514_4053501_-	PRK10754, PRK10754, NADPH:quinone reductase	NA|469aa|up_2|CP034276.1_4053748_4055155_+	PRK08006, PRK08006, replicative DNA helicase DnaB	NA|361aa|up_1|CP034276.1_4055196_4056279_+	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|213aa|up_0|CP034276.1_4056271_4056910_+	NA	NA|160aa|down_0|CP034276.1_4057862_4058342_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|205aa|down_1|CP034276.1_4058592_4059207_+	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|398aa|down_2|CP034276.1_4059270_4060464_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|168aa|down_3|CP034276.1_4060632_4061136_+	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|160aa|down_4|CP034276.1_4061254_4061734_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|119aa|down_5|CP034276.1_4061834_4062191_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|136aa|down_6|CP034276.1_4062240_4062648_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|286aa|down_7|CP034276.1_4062640_4063498_-	NA	cas1|327aa|down_8|CP034276.1_4065746_4066727_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3f|1099aa|down_9|CP034276.1_4066723_4070020_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2
GCA_003932035.1_ASM393203v1	CP034276	Pectobacterium carotovorum strain 14A chromosome, complete genome	5	4063742-4065450	5,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Type I-F	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	28,28,27	28	TypeI-F	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA|213aa|up_8|CP034276.1_4056271_4056910_+,NA|286aa|up_0|CP034276.1_4062640_4063498_-,NA|94aa|down_9|CP034276.1_4079520_4079802_+	NA|361aa|up_9|CP034276.1_4055196_4056279_+	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|213aa|up_8|CP034276.1_4056271_4056910_+	NA	NA|160aa|up_7|CP034276.1_4057862_4058342_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|205aa|up_6|CP034276.1_4058592_4059207_+	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|398aa|up_5|CP034276.1_4059270_4060464_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|168aa|up_4|CP034276.1_4060632_4061136_+	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|160aa|up_3|CP034276.1_4061254_4061734_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|119aa|up_2|CP034276.1_4061834_4062191_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|136aa|up_1|CP034276.1_4062240_4062648_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|286aa|up_0|CP034276.1_4062640_4063498_-	NA	cas1|327aa|down_0|CP034276.1_4065746_4066727_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3f|1099aa|down_1|CP034276.1_4066723_4070020_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas8f|445aa|down_2|CP034276.1_4070043_4071378_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|311aa|down_3|CP034276.1_4071374_4072307_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|338aa|down_4|CP034276.1_4072320_4073334_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|down_5|CP034276.1_4073343_4073898_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|140aa|down_6|CP034276.1_4074813_4075233_-	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|945aa|down_7|CP034276.1_4075248_4078083_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|182aa|down_8|CP034276.1_4078327_4078873_+	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|94aa|down_9|CP034276.1_4079520_4079802_+	NA
GCA_003932035.1_ASM393203v1	CP034276	Pectobacterium carotovorum strain 14A chromosome, complete genome	6	4074027-4074774	3,6,3	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Type I-F	GTTCACTGCCGCATAGGCAGCTTAGAAA,GTTCACTGCCGCATAGGCAGCTTAGAAA,GTTCACTGCCGCATAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	11,12,12	12	TypeI-F	cas3,RT,csa3,DinG,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA|286aa|up_6|CP034276.1_4062640_4063498_-,NA|94aa|down_3|CP034276.1_4079520_4079802_+	NA|160aa|up_9|CP034276.1_4061254_4061734_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|119aa|up_8|CP034276.1_4061834_4062191_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|136aa|up_7|CP034276.1_4062240_4062648_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|286aa|up_6|CP034276.1_4062640_4063498_-	NA	cas1|327aa|up_5|CP034276.1_4065746_4066727_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3f|1099aa|up_4|CP034276.1_4066723_4070020_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas8f|445aa|up_3|CP034276.1_4070043_4071378_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|311aa|up_2|CP034276.1_4071374_4072307_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|338aa|up_1|CP034276.1_4072320_4073334_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_0|CP034276.1_4073343_4073898_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|140aa|down_0|CP034276.1_4074813_4075233_-	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|945aa|down_1|CP034276.1_4075248_4078083_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|182aa|down_2|CP034276.1_4078327_4078873_+	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|94aa|down_3|CP034276.1_4079520_4079802_+	NA	NA|2753aa|down_4|CP034276.1_4079953_4088212_+	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|495aa|down_5|CP034276.1_4088277_4089762_+	cd08589, PI-PLCc_SaPLC1_like, Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins	NA|346aa|down_6|CP034276.1_4089796_4090834_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|351aa|down_7|CP034276.1_4090833_4091886_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|333aa|down_8|CP034276.1_4091894_4092893_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|364aa|down_9|CP034276.1_4092916_4094008_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
