assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003955985.1_ASM395598v1	CP033784	Corynebacterium jeikeium strain FDAARGOS_574 chromosome, complete genome	1	101077-104277	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,csa3,cas4,WYL	Type I-E	GTTTTCCCCGCGCGAGCGGGGATGTTCC,GTTTTCCCCGCGCGAGCGGGGATGTTCC,GTTTTCCCCGCGCGAGCGGGGATGTTCC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	52,52,48	52	TypeI-E	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,csa3,cas4,WYL	NA,NA|162aa|down_0|CP033784.1_104332_104818_+	NA|346aa|up_9|CP033784.1_89328_90366_-	cd19151, AKR_AKR14A2, Salmonella enterica aldo-keto reductase (AKR) and similar protein	NA|443aa|up_8|CP033784.1_90511_91840_+	pfam03929, PepSY_TM, PepSY-associated TM region	cas3|937aa|up_7|CP033784.1_92095_94906_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|561aa|up_6|CP033784.1_94854_96537_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|208aa|up_5|CP033784.1_96539_97163_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|374aa|up_4|CP033784.1_97183_98305_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|234aa|up_3|CP033784.1_98304_99006_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|234aa|up_2|CP033784.1_99009_99711_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|320aa|up_1|CP033784.1_99713_100673_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|122aa|up_0|CP033784.1_100666_101032_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|162aa|down_0|CP033784.1_104332_104818_+	NA	NA|112aa|down_1|CP033784.1_104926_105262_+	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_2|CP033784.1_105263_106115_-	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|406aa|down_3|CP033784.1_106111_107329_-	COG3268, COG3268, Uncharacterized conserved protein [Function unknown]	NA|403aa|down_4|CP033784.1_107436_108645_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|424aa|down_5|CP033784.1_108796_110068_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|129aa|down_6|CP033784.1_110058_110445_-	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|241aa|down_7|CP033784.1_110475_111198_-	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins	NA|400aa|down_8|CP033784.1_111249_112449_+	PRK13375, pimE, mannosyltransferase; Provisional	NA|806aa|down_9|CP033784.1_112461_114879_-	COG1643, HrpA, HrpA-like helicases [DNA replication, recombination, and repair]
GCA_003955985.1_ASM395598v1	CP033784	Corynebacterium jeikeium strain FDAARGOS_574 chromosome, complete genome	2	249483-249566	2	CRISPRCasFinder	no	DEDDh	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,csa3,cas4,WYL	Unclear	ATGTCGCTAGACCGGGAATGCGT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,csa3,cas4,WYL	NA|381aa|up_2|CP033784.1_245251_246394_-,NA|216aa|down_5|CP033784.1_256610_257258_+,NA|120aa|down_9|CP033784.1_263468_263828_+	NA|450aa|up_9|CP033784.1_232659_234009_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	DEDDh|432aa|up_8|CP033784.1_234069_235365_-	PRK05601, PRK05601, DNA polymerase III subunit epsilon; Validated	NA|347aa|up_7|CP033784.1_235730_236771_+	COG5340, COG5340, Predicted transcriptional regulator [Transcription]	NA|606aa|up_6|CP033784.1_236889_238707_-	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated	NA|878aa|up_5|CP033784.1_239102_241736_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|772aa|up_4|CP033784.1_241735_244051_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|346aa|up_3|CP033784.1_244057_245095_-	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|381aa|up_2|CP033784.1_245251_246394_-	NA	NA|422aa|up_1|CP033784.1_246880_248146_+	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|347aa|up_0|CP033784.1_248155_249196_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|319aa|down_0|CP033784.1_250027_250984_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|337aa|down_1|CP033784.1_251020_252031_+	pfam01032, FecCD, FecCD transport family	NA|348aa|down_2|CP033784.1_252036_253080_+	pfam01032, FecCD, FecCD transport family	NA|265aa|down_3|CP033784.1_253076_253871_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|308aa|down_4|CP033784.1_253867_254791_-	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|216aa|down_5|CP033784.1_256610_257258_+	NA	NA|443aa|down_6|CP033784.1_257467_258796_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|965aa|down_7|CP033784.1_259633_262528_+	pfam18202, TQ, T-Q ester bond containing domain	NA|252aa|down_8|CP033784.1_262537_263293_+	cd05829, Sortase_F, Sortase domain found in the class F family of sortases	NA|120aa|down_9|CP033784.1_263468_263828_+	NA
GCA_003955985.1_ASM395598v1	CP033784	Corynebacterium jeikeium strain FDAARGOS_574 chromosome, complete genome	3	2085467-2085548	3	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,csa3,cas4,WYL	Orphan	CCAATGCGAGTTAGTGACTGCGT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,csa3,cas4,WYL	NA|302aa|up_7|CP033784.1_2077424_2078330_+,NA|63aa|down_0|CP033784.1_2085816_2086005_-	NA|379aa|up_9|CP033784.1_2075003_2076140_+	TIGR01366, Putative_phosphoserine_aminotransferase_PSAT	NA|376aa|up_8|CP033784.1_2076281_2077409_+	pfam11268, DUF3071, Protein of unknown function (DUF3071)	NA|302aa|up_7|CP033784.1_2077424_2078330_+	NA	NA|291aa|up_6|CP033784.1_2078333_2079206_-	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|505aa|up_5|CP033784.1_2079215_2080730_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|215aa|up_4|CP033784.1_2080888_2081533_-	pfam11228, DUF3027, Protein of unknown function (DUF3027)	NA|387aa|up_3|CP033784.1_2081604_2082765_+	pfam05096, Glu_cyclase_2, Glutamine cyclotransferase	NA|165aa|up_2|CP033784.1_2082887_2083382_+	pfam10969, DUF2771, Protein of unknown function (DUF2771)	NA|144aa|up_1|CP033784.1_2083454_2083886_-	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea	NA|207aa|up_0|CP033784.1_2084756_2085377_+	pfam06737, Transglycosylas, Transglycosylase-like domain	NA|63aa|down_0|CP033784.1_2085816_2086005_-	NA	NA|839aa|down_1|CP033784.1_2086079_2088596_+	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|568aa|down_2|CP033784.1_2088744_2090448_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|214aa|down_3|CP033784.1_2090473_2091115_+	pfam11580, DUF3239, Protein of unknown function (DUF3239)	NA|381aa|down_4|CP033784.1_2091246_2092389_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|427aa|down_5|CP033784.1_2098527_2099808_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|200aa|down_6|CP033784.1_2099837_2100437_+	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase	NA|279aa|down_7|CP033784.1_2100508_2101345_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|275aa|down_8|CP033784.1_2102272_2103097_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|246aa|down_9|CP033784.1_2103099_2103837_-	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ
GCA_003955985.1_ASM395598v1	CP033784	Corynebacterium jeikeium strain FDAARGOS_574 chromosome, complete genome	4	2388885-2390866	4,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,csa3,cas4,WYL	Type I-E	GGAAATACCTCCGCGTGTGCGGAGAAGAG,GGAAATACCTCCGCGTGTGCGGAGAAGAG,GGAAATACCTCCGCGTGTGCGGAGAAGAG	29,29,29	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	32,32,20	32	TypeI-E	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,csa3,cas4,WYL	NA|611aa|up_2|CP033784.1_2384886_2386719_+,NA	NA|390aa|up_9|CP033784.1_2374928_2376098_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|444aa|up_8|CP033784.1_2376154_2377486_-	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|160aa|up_7|CP033784.1_2377671_2378151_+	pfam00582, Usp, Universal stress protein family	NA|65aa|up_6|CP033784.1_2378346_2378541_+	pfam11021, DUF2613, Protein of unknown function (DUF2613)	NA|1197aa|up_5|CP033784.1_2378570_2382161_+	pfam11847, DUF3367, Domain of unknown function (DUF3367)	NA|427aa|up_4|CP033784.1_2382167_2383448_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|387aa|up_3|CP033784.1_2383644_2384805_+	pfam11271, DUF3068, Protein of unknown function (DUF3068)	NA|611aa|up_2|CP033784.1_2384886_2386719_+	NA	NA|393aa|up_1|CP033784.1_2386698_2387877_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|279aa|up_0|CP033784.1_2387997_2388834_+	pfam08241, Methyltransf_11, Methyltransferase domain	cas2|105aa|down_0|CP033784.1_2390884_2391199_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|313aa|down_1|CP033784.1_2391216_2392155_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas3|914aa|down_2|CP033784.1_2392154_2394896_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas6e|228aa|down_3|CP033784.1_2394892_2395576_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas8e|535aa|down_4|CP033784.1_2395795_2397400_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|227aa|down_5|CP033784.1_2397399_2398080_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|374aa|down_6|CP033784.1_2398127_2399249_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|238aa|down_7|CP033784.1_2399241_2399955_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|412aa|down_8|CP033784.1_2400625_2401861_+	PRK08242, PRK08242, acetyl-CoA C-acetyltransferase	NA|744aa|down_9|CP033784.1_2401935_2404167_+	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ
