assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003957355.1_ASM395735v1	CP025471	Pediococcus acidilactici strain PB22 chromosome, complete genome	3	425623-426384	1,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	csa3,cas9,cas1,cas2,csn2,DEDDh,DinG,cas3	Type II-C,Type II-A,Type II-B	GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC,GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC,GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC	36,36,36	0	0	NA	NA	NA:NA:NA	11,11,11	11	TypeII-C,TypeII-A,TypeII-B	csa3,cas9,cas1,cas2,csn2,DEDDh,DinG,cas3	NA,NA	NA|639aa|up_9|CP025471.1_409791_411708_+	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase	NA|518aa|up_8|CP025471.1_411780_413334_+	PRK00074, guaA, GMP synthase; Reviewed	NA|215aa|up_7|CP025471.1_413627_414272_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|470aa|up_6|CP025471.1_414464_415874_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|845aa|up_5|CP025471.1_415900_418435_+	cd09601, M1_APN-Q_like, Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1)	NA|194aa|up_4|CP025471.1_418661_419243_-	pfam09726, Macoilin, Macoilin family	cas9|1365aa|up_3|CP025471.1_419427_423522_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|up_2|CP025471.1_423737_424643_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|CP025471.1_424620_424926_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|224aa|up_0|CP025471.1_424922_425594_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|216aa|down_0|CP025471.1_427404_428052_-	pfam02517, Abi, CAAX protease self-immunity	NA|95aa|down_1|CP025471.1_428241_428526_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|541aa|down_2|CP025471.1_428548_430171_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|611aa|down_3|CP025471.1_430470_432303_+	pfam13520, AA_permease_2, Amino acid permease	NA|392aa|down_4|CP025471.1_432524_433700_+	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|213aa|down_5|CP025471.1_433767_434406_-	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|440aa|down_6|CP025471.1_434438_435758_+	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]	NA|129aa|down_7|CP025471.1_436042_436429_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|185aa|down_8|CP025471.1_436557_437112_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|788aa|down_9|CP025471.1_437260_439624_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed
GCA_003957355.1_ASM395735v1	CP025471	Pediococcus acidilactici strain PB22 chromosome, complete genome	4	621845-621948	3	CRISPRCasFinder	no		csa3,cas9,cas1,cas2,csn2,DEDDh,DinG,cas3	Orphan	TTAGCTCAGTTGGGAGAGCATCTG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas9,cas1,cas2,csn2,DEDDh,DinG,cas3	NA|85aa|up_9|CP025471.1_605236_605491_+,NA|63aa|up_6|CP025471.1_609732_609921_+,NA|244aa|down_0|CP025471.1_623892_624624_-	NA|85aa|up_9|CP025471.1_605236_605491_+	NA	NA|326aa|up_8|CP025471.1_606109_607087_+	PRK05458, PRK05458, guanosine 5'-monophosphate oxidoreductase; Provisional	NA|736aa|up_7|CP025471.1_607309_609517_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|63aa|up_6|CP025471.1_609732_609921_+	NA	NA|89aa|up_5|CP025471.1_610063_610330_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|575aa|up_4|CP025471.1_610329_612054_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|258aa|up_3|CP025471.1_612126_612900_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|396aa|up_2|CP025471.1_612985_614173_+	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins	NA|339aa|up_1|CP025471.1_614203_615220_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|335aa|up_0|CP025471.1_615265_616270_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|244aa|down_0|CP025471.1_623892_624624_-	NA	NA|397aa|down_1|CP025471.1_624795_625986_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|490aa|down_2|CP025471.1_626161_627631_+	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|188aa|down_3|CP025471.1_627710_628274_-	pfam06962, rRNA_methylase, Putative rRNA methylase	NA|212aa|down_4|CP025471.1_628266_628902_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|806aa|down_5|CP025471.1_629308_631726_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|561aa|down_6|CP025471.1_631981_633664_+	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|240aa|down_7|CP025471.1_633674_634394_+	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like	NA|277aa|down_8|CP025471.1_634500_635331_-	cd01171, YXKO-related, B	NA|154aa|down_9|CP025471.1_635456_635918_+	pfam00582, Usp, Universal stress protein family
