The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	337535	397356	3022095	transposase,protease	Staphylococcus_phage(40.0%)	59	NA	NA
AZP97729.1|337535_338225_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AZQ00272.1|338450_338975_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AZP97730.1|339057_339447_-	DUF1093 domain-containing protein	NA	NA	NA	NA	NA
AZP97731.1|339478_340003_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97732.1|339992_340262_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZP97733.1|340369_341785_+|transposase	IS5 family transposase ISLca2	transposase	NA	NA	NA	NA
AZP97734.1|342210_342936_-	rhodopsin	NA	NA	NA	NA	NA
AZP97735.1|342935_343616_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97736.1|343605_344394_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97737.1|344844_346371_+	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	31.3	7.4e-53
AZP97738.1|346641_347763_+	PRD domain-containing protein	NA	NA	NA	NA	NA
AZQ00273.1|347755_348724_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
AZP97739.1|348724_349036_+	PTS ascorbate transporter subunit IIB	NA	NA	NA	NA	NA
AZP97740.1|349177_350464_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA	NA
AZP97741.1|350480_350903_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97742.1|350924_351785_+	ketose-bisphosphate aldolase	NA	NA	NA	NA	NA
AZP97743.1|351897_352539_+	kinase	NA	NA	NA	NA	NA
AZP97744.1|352825_353656_+	transcriptional regulator	NA	NA	NA	NA	NA
AZP97745.1|353648_354518_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AZP97746.1|354557_355553_+	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
AZP97747.1|356107_356887_+	alpha/beta hydrolase	NA	A0A291AV30	Mycobacterium_phage	25.4	1.0e-05
AZP97748.1|357157_357412_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97749.1|358140_358875_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97750.1|358781_359780_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	39.8	1.8e-55
AZP97751.1|359742_359928_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97752.1|360503_361358_+	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	29.2	8.4e-14
AZQ00274.1|361360_362140_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AZP97753.1|362152_363277_+	radical SAM/SPASM domain-containing protein	NA	NA	NA	NA	NA
AZP97754.1|363624_364560_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA	NA
AZP97755.1|364571_365978_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZP97756.1|365993_366491_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZP97757.1|366533_367274_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZP97758.1|367418_368216_-	protein SipE	NA	NA	NA	NA	NA
AZP97759.1|368226_369069_-	PTS fructose transporter subunit IID	NA	NA	NA	NA	NA
AZP97760.1|369072_369840_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
AZP97761.1|369865_370375_-	PTS mannose/fructose/sorbose transporter subunit IIB	NA	NA	NA	NA	NA
AZP97762.1|370402_370810_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
AZP97763.1|371104_373843_+	PRD domain-containing protein	NA	NA	NA	NA	NA
AZP97764.1|373884_375180_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA	NA
AZP97765.1|375589_377047_+	PRD domain-containing protein	NA	NA	NA	NA	NA
AZP97766.1|377048_377519_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZP97767.1|377520_378462_+	ketose-bisphosphate aldolase	NA	NA	NA	NA	NA
AZP97768.1|378491_378965_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
AZP97769.1|378961_379279_+	PTS fructose transporter subunit IIB	NA	NA	NA	NA	NA
AZP97770.1|379294_380380_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA	NA
AZP97771.1|380402_381377_+	DUF4432 domain-containing protein	NA	NA	NA	NA	NA
AZP97772.1|381383_382070_+	D-lyxose/D-mannose family sugar isomerase	NA	NA	NA	NA	NA
AZP97773.1|382188_383655_+	xylulokinase	NA	NA	NA	NA	NA
AZP97774.1|383814_384813_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	38.4	2.5e-49
AZP97775.1|384956_385400_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
AZP97776.1|385439_386984_+	PTS subunit IIBC	NA	NA	NA	NA	NA
AZP97777.1|387048_388215_+	putative C-S lyase	NA	NA	NA	NA	NA
AZP97778.1|388216_389941_+	HTH domain-containing protein	NA	NA	NA	NA	NA
AZP97779.1|390295_392161_+	PRD domain-containing protein	NA	NA	NA	NA	NA
AZP97780.1|392150_393017_+	ketose-bisphosphate aldolase	NA	NA	NA	NA	NA
AZP97781.1|393056_395000_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
AZP97782.1|395227_395425_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97783.1|395399_395753_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AZP97784.1|395853_397356_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	541969	565427	3022095	transposase,integrase	Lactobacillus_phage(68.42%)	40	534639:534653	569751:569765
534639:534653	attL	ATGGTCTGATCTTGT	NA	NA	NA	NA
AZP97905.1|541969_542899_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	63.7	5.9e-106
AZP97906.1|543092_543638_-	hydrophobic protein	NA	NA	NA	NA	NA
AZP97907.1|543958_545128_-|integrase	site-specific integrase	integrase	Q6J1W6	Lactobacillus_phage	98.2	6.6e-219
AZP97908.1|545240_545501_-	hypothetical protein	NA	B4XYT0	Lactobacillus_phage	40.7	2.5e-09
AZP97909.1|545590_546211_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97910.1|546194_546431_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97911.1|546431_546539_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97912.1|546623_547331_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AZP97913.1|547489_547912_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0P0IJN5	Lactobacillus_phage	39.1	7.8e-21
AZP97914.1|547904_548258_-	XRE family transcriptional regulator	NA	A0A141E1M3	Streptococcus_phage	40.9	7.7e-14
AZP97915.1|548501_548750_+	hypothetical protein	NA	A0A0P0ID24	Lactobacillus_phage	97.5	2.7e-37
AZP97916.1|548791_548992_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97917.1|548962_549796_-	TIGR02391 family protein	NA	A0A1S5SBU1	Streptococcus_phage	37.8	2.8e-46
AZP97918.1|549856_550615_+	hypothetical protein	NA	A0A1B0YEA7	Lactobacillus_phage	49.4	1.9e-41
AZP97919.1|550615_550795_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97920.1|550787_551039_-	DUF1883 domain-containing protein	NA	NA	NA	NA	NA
AZP97921.1|551104_551461_+	DUF771 domain-containing protein	NA	U5U4L9	Lactobacillus_phage	98.3	2.0e-62
AZP97922.1|551460_551553_+	hypothetical protein	NA	A0A0P0IZE0	Lactobacillus_phage	96.7	4.5e-11
AZP97923.1|551545_551749_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97924.1|551731_552277_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97925.1|552457_552772_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97926.1|552764_553511_+	DnaD domain protein	NA	A0A0N7IRA7	Lactobacillus_phage	56.1	5.8e-35
AZP97927.1|553525_554350_+	DNA replication protein	NA	A0A0P0I3L9	Lactobacillus_phage	74.7	9.6e-116
AZP97928.1|554349_554868_+	DNA polymerase III subunit epsilon	NA	NA	NA	NA	NA
AZP97929.1|554914_555337_+	replication terminator protein	NA	NA	NA	NA	NA
AZP97930.1|555338_556076_+	hypothetical protein	NA	A0A097BY87	Enterococcus_phage	43.0	1.3e-47
AZP97931.1|556087_556375_+	hypothetical protein	NA	Q8LTA8	Lactobacillus_phage	76.8	1.6e-38
AZP97932.1|556444_556777_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97933.1|557291_557735_+	transcriptional regulator	NA	A0A0P0IZI6	Lactobacillus_phage	97.3	1.2e-77
AZP97934.1|558079_558277_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97935.1|558248_558902_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97936.1|558971_559190_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97937.1|559152_560151_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	39.8	3.9e-55
AZP97938.1|560346_560565_-	CsbD family protein	NA	NA	NA	NA	NA
AZP97939.1|562097_562433_+	ribonucleoside-diphosphate reductase	NA	A0A0N7IRA2	Lactobacillus_phage	90.6	6.8e-52
AZP97940.1|562429_562540_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97941.1|562552_562885_+|transposase	transposase	transposase	NA	NA	NA	NA
AZP97942.1|562914_563643_+|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	40.1	7.6e-32
AZP97943.1|563687_564518_+|transposase	transposase	transposase	NA	NA	NA	NA
AZP97944.1|564563_565427_+|transposase	transposase	transposase	Q6J1X2	Lactobacillus_phage	30.5	3.1e-24
569751:569765	attR	ACAAGATCAGACCAT	NA	NA	NA	NA
>prophage 3
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	594676	619284	3022095	transposase	Lactobacillus_phage(50.0%)	27	NA	NA
AZP97976.1|594676_595464_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AZP97977.1|595831_596104_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97978.1|596163_598968_-	magnesium-transporting ATPase	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	27.6	1.5e-72
AZP97979.1|599509_600193_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.3	3.1e-59
AZP97980.1|600667_601822_+	cation:proton antiporter	NA	NA	NA	NA	NA
AZP97981.1|601830_602618_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AZP97982.1|602767_603388_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	52.9	4.9e-56
AZP97983.1|603575_604505_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZP97984.1|604518_605349_-	PTS fructose transporter subunit IID	NA	NA	NA	NA	NA
AZP97985.1|605361_606216_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
AZP97986.1|606244_606739_-	PTS mannose/fructose/sorbose transporter subunit IIB	NA	NA	NA	NA	NA
AZP97987.1|606782_607202_-	PTS N'-diacetylchitobiose transporter subunit IIA	NA	NA	NA	NA	NA
AZP97988.1|607378_608101_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
AZP97989.1|608198_608936_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZP97990.1|609240_609561_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97991.1|609657_610245_+	recombinase family protein	NA	M4QQC6	Vibrio_phage	42.3	1.0e-18
AZP97992.1|610379_611741_+	MFS transporter	NA	NA	NA	NA	NA
AZP97993.1|611941_612499_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97994.1|613020_613808_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AZP97995.1|615011_615233_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AZP97996.1|615275_615407_-|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	90.7	2.3e-16
AZQ00282.1|615487_615670_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97997.1|615663_616581_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
AZP97998.1|616727_617336_+	NADPH-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	52.8	1.8e-50
AZP97999.1|617346_618615_+	NADPH-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	47.7	1.8e-49
AZP98000.1|618888_619020_+|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	90.7	2.3e-16
AZP98001.1|619062_619284_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	879172	971825	3022095	portal,integrase,capsid,holin,head,protease,transposase,tRNA,tail,terminase	Lactobacillus_phage(90.74%)	101	888339:888357	967808:967826
AZP98230.1|879172_880675_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
AZP98231.1|880969_881518_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AZP98232.1|881897_883616_+	APC family permease	NA	NA	NA	NA	NA
AZP98233.1|883902_885111_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZP98234.1|885113_886142_+	glycosyltransferase	NA	NA	NA	NA	NA
AZP98235.1|886154_887168_+	lysylphosphatidylglycerol synthetase family protein	NA	NA	NA	NA	NA
AZP98236.1|887203_887557_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98237.1|887642_888818_-	aromatic amino acid aminotransferase	NA	NA	NA	NA	NA
888339:888357	attL	AGCAATCGTTGCTTCGATC	NA	NA	NA	NA
AZP98238.1|889063_889342_+	DUF1797 domain-containing protein	NA	NA	NA	NA	NA
AZP98239.1|889326_889467_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98240.1|889572_891666_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	46.9	6.1e-151
AZP98241.1|891858_892299_+	transcriptional repressor	NA	NA	NA	NA	NA
AZP98242.1|898358_899006_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98243.1|899186_900371_+	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	66.0	1.5e-141
AZP98244.1|900484_901978_+	MFS transporter	NA	NA	NA	NA	NA
AZP98245.1|902072_902543_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZP98246.1|902786_904265_+	MFS transporter	NA	NA	NA	NA	NA
AZP98247.1|904261_904987_+	DUF4811 domain-containing protein	NA	NA	NA	NA	NA
AZP98248.1|905087_905771_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AZP98249.1|905746_905944_+	alpha-galactosidase	NA	NA	NA	NA	NA
AZP98250.1|906349_908761_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	68.4	0.0e+00
AZP98251.1|908829_908940_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98252.1|909026_910670_+	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AZP98253.1|910674_911385_+	16S rRNA pseudouridine(516) synthase	NA	NA	NA	NA	NA
AZP98254.1|911527_911743_+	DNA-binding protein	NA	NA	NA	NA	NA
AZP98255.1|911859_912681_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZP98256.1|912677_913181_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
AZP98257.1|913504_914644_-|integrase	site-specific integrase	integrase	A0A0P0IXL3	Lactobacillus_phage	100.0	2.4e-218
AZP98258.1|914761_915829_-|protease	CAAX protease	protease	A0A0N7IRA5	Lactobacillus_phage	100.0	1.1e-207
AZP98259.1|915973_916405_-	hypothetical protein	NA	A0A0P0IJV8	Lactobacillus_phage	100.0	6.8e-73
AZP98260.1|916474_916957_-	hypothetical protein	NA	A0A0P0IZP3	Lactobacillus_phage	100.0	2.1e-83
AZP98261.1|916960_917254_-	hypothetical protein	NA	A0A0P0HRW5	Lactobacillus_phage	100.0	5.7e-47
AZP98262.1|917437_918298_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0P0IV64	Lactobacillus_phage	100.0	2.8e-158
AZP98263.1|918284_918653_-	transcriptional regulator	NA	A0A0P0I3L3	Lactobacillus_phage	100.0	2.8e-59
AZP98264.1|918908_919106_+	hypothetical protein	NA	A0A0P0IK60	Lactobacillus_phage	100.0	5.2e-28
AZP98265.1|919102_919825_+	phage regulatory protein	NA	A0A0P0IDD0	Lactobacillus_phage	100.0	1.4e-126
AZP98266.1|919832_920045_+	hypothetical protein	NA	A0A0N7IRA6	Lactobacillus_phage	100.0	7.8e-30
AZP98267.1|920153_920378_+	DUF771 domain-containing protein	NA	A0A0P0IQT9	Lactobacillus_phage	100.0	2.6e-39
AZP98268.1|920377_920470_+	hypothetical protein	NA	A0A0P0I7S8	Lactobacillus_phage	100.0	1.2e-11
AZP98269.1|920466_920679_+	hypothetical protein	NA	A0A0P0IXL9	Lactobacillus_phage	100.0	2.5e-36
AZP98270.1|920688_921564_+	hypothetical protein	NA	A0A0P0IJW5	Lactobacillus_phage	100.0	1.1e-170
AZP98271.1|921566_921761_+	hypothetical protein	NA	A0A0P0IZQ2	Lactobacillus_phage	100.0	2.5e-30
AZP98272.1|921760_922648_+	recombinase RecT	NA	A0A0P0HRX2	Lactobacillus_phage	100.0	8.6e-163
AZP98273.1|922656_922902_+	XRE family transcriptional regulator	NA	A0A0P0IV68	Lactobacillus_phage	100.0	2.6e-37
AZP98274.1|922906_923752_+	DnaD domain protein	NA	A0A0N7IRA7	Lactobacillus_phage	100.0	1.0e-133
AZP98275.1|923789_924611_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	100.0	6.1e-155
AZP98276.1|924607_924907_+	hypothetical protein	NA	A0A0P0IK66	Lactobacillus_phage	100.0	2.1e-49
AZP98277.1|924869_925154_+	hypothetical protein	NA	A0A0P0IDD7	Lactobacillus_phage	100.0	8.8e-45
AZP98278.1|925122_925470_+	hypothetical protein	NA	A0A0P0IQU7	Lactobacillus_phage	100.0	1.5e-62
AZP98279.1|925462_926041_+	HNH endonuclease	NA	A0A0P0I7T6	Lactobacillus_phage	100.0	1.1e-105
AZP98280.1|926054_926477_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0P0IXM5	Lactobacillus_phage	100.0	5.5e-75
AZP98281.1|926481_926745_+	hypothetical protein	NA	A0A0P0IJX1	Lactobacillus_phage	100.0	6.1e-40
AZP98282.1|926768_927092_+	hypothetical protein	NA	A0A0N7IRA8	Lactobacillus_phage	100.0	9.7e-56
AZP98283.1|927170_927620_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0P0IZR0	Lactobacillus_phage	100.0	1.2e-80
AZP98284.1|927844_928225_+	HNH endonuclease	NA	A0A0P0HRY0	Lactobacillus_phage	100.0	2.5e-71
AZQ00292.1|928294_928669_+	hypothetical protein	NA	A0A1B0YE76	Lactobacillus_phage	100.0	3.6e-62
AZP98285.1|928671_930402_+|terminase	terminase large subunit	terminase	A0A0P0IJU3	Lactobacillus_phage	100.0	0.0e+00
AZP98286.1|930420_931656_+|portal	phage portal protein	portal	A0A0P0IZM3	Lactobacillus_phage	100.0	2.6e-234
AZP98287.1|931633_932341_+|protease	Clp protease ClpP	protease	A0A0P0HRU7	Lactobacillus_phage	100.0	7.2e-128
AZP98288.1|932345_933575_+|capsid	phage major capsid protein	capsid	A0A0P0IV50	Lactobacillus_phage	100.0	7.3e-229
AZP98289.1|933648_933897_+	hypothetical protein	NA	A0A0P0I3K0	Lactobacillus_phage	100.0	9.1e-38
AZP98290.1|933910_934237_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1B0Y2R7	Lactobacillus_phage	100.0	7.0e-54
AZP98291.1|934175_934514_+|head,tail	phage head-tail joining protein	head,tail	A0A0N7IRA3	Lactobacillus_phage	100.0	2.2e-58
AZP98292.1|934497_934827_+	hypothetical protein	NA	A0A0P0IDB8	Lactobacillus_phage	100.0	3.1e-57
AZP98293.1|934816_935200_+	hypothetical protein	NA	A0A0P0IQS9	Lactobacillus_phage	100.0	4.5e-68
AZP98294.1|935211_935859_+|tail	phage tail protein	tail	A0A0P0I7R6	Lactobacillus_phage	100.0	1.5e-119
AZP98295.1|935935_936301_+	hypothetical protein	NA	A0A0P0IXK4	Lactobacillus_phage	100.0	4.6e-62
AZP98296.1|936562_939535_+	tape measure domain-containing protein	NA	A0A0P0IZN3	Lactobacillus_phage	100.0	1.3e-292
AZP98297.1|939541_940237_+|tail	phage tail protein	tail	A0A0P0HRV6	Lactobacillus_phage	100.0	8.3e-129
AZP98298.1|940233_944640_+	hypothetical protein	NA	A0A0N7IRA4	Lactobacillus_phage	100.0	0.0e+00
AZP98299.1|944668_945094_+	DUF1617 domain-containing protein	NA	A0A1B0Y2S1	Lactobacillus_phage	100.0	8.8e-73
AZP98300.1|945096_945366_+	hypothetical protein	NA	A0A0P0I3K6	Lactobacillus_phage	100.0	2.4e-39
AZP98301.1|945411_945705_+	hypothetical protein	NA	A0A0P0IK41	Lactobacillus_phage	100.0	4.0e-48
AZP98302.1|945694_946129_+|holin	phage holin	holin	A0A0P0IDC6	Lactobacillus_phage	100.0	7.4e-51
AZP98303.1|946128_946317_+	hypothetical protein	NA	A0A0P0IQT6	Lactobacillus_phage	100.0	6.7e-25
AZP98304.1|946303_947278_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0P0I7S1	Lactobacillus_phage	100.0	9.1e-198
AZP98305.1|947799_949311_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
AZP98306.1|949338_950898_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
AZP98307.1|950994_951468_+	glutathione peroxidase	NA	NA	NA	NA	NA
AZP98308.1|951934_953140_+	putative C-S lyase	NA	NA	NA	NA	NA
AZP98309.1|953156_954155_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	38.4	2.5e-49
AZP98310.1|954392_955721_-	phosphohydrolase	NA	NA	NA	NA	NA
AZP98311.1|955911_956178_+	ACT domain-containing protein	NA	NA	NA	NA	NA
AZP98312.1|956226_957570_+	PFL family protein	NA	NA	NA	NA	NA
AZP98313.1|957679_958735_+	competence protein	NA	NA	NA	NA	NA
AZP98314.1|958924_959560_-	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AZP98315.1|959629_960223_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
AZP98316.1|960416_961088_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
AZP98317.1|961089_961887_+	NAD(+) kinase	NA	NA	NA	NA	NA
AZP98318.1|961886_962789_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AZP98319.1|962897_963956_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
AZP98320.1|964112_964748_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
AZP98321.1|964769_965588_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
AZP98322.1|965790_966831_-	lactonase family protein	NA	NA	NA	NA	NA
AZP98323.1|967102_967480_+	PTS sorbitol transporter subunit IIA	NA	NA	NA	NA	NA
AZP98324.1|967591_967861_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
967808:967826	attR	AGCAATCGTTGCTTCGATC	NA	NA	NA	NA
AZP98325.1|967988_968978_-	guanosine monophosphate reductase	NA	Q4ZCY7	Staphylococcus_virus	71.6	1.4e-137
AZP98326.1|969205_970153_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
AZP98327.1|970218_971061_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
AZP98328.1|971104_971317_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98329.1|971315_971825_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
>prophage 5
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	1004400	1103344	3022095	portal,integrase,capsid,holin,head,protease,tRNA,tail,terminase	Lactobacillus_phage(77.05%)	103	1028051:1028069	1062959:1062977
AZP98360.1|1004400_1004736_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZP98361.1|1004927_1005887_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZP98362.1|1005888_1006716_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AZP98363.1|1006726_1007782_+	glycerol-3-phosphate dehydrogenase (NAD(P)(+))	NA	NA	NA	NA	NA
AZP98364.1|1007847_1008801_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	47.9	8.9e-81
AZQ00293.1|1009384_1011112_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	54.9	3.3e-182
AZP98365.1|1011346_1011994_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZP98366.1|1011986_1012997_+	sensor histidine kinase	NA	NA	NA	NA	NA
AZP98367.1|1013767_1016134_+	ABC transporter permease	NA	NA	NA	NA	NA
AZP98368.1|1016291_1016939_+	hydrolase	NA	NA	NA	NA	NA
AZP98369.1|1017144_1019160_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
AZP98370.1|1019427_1022319_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.2	1.9e-307
AZP98371.1|1022411_1022612_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98372.1|1022670_1023210_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98373.1|1023372_1024260_+	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.4	1.1e-08
AZP98374.1|1024256_1025285_+	hypothetical protein	NA	A1IMD5	Streptococcus_phage	51.2	2.3e-90
AZP98375.1|1025289_1026237_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.7	9.2e-54
AZP98376.1|1026622_1027078_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZP98377.1|1027194_1027785_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	52.3	1.1e-52
1028051:1028069	attL	TGTGCAATTTGTGTGCAAT	NA	NA	NA	NA
AZP98378.1|1028189_1029341_-|integrase	site-specific integrase	integrase	Q8W767	Lactobacillus_phage	100.0	2.2e-219
AZP98379.1|1029451_1030213_-	hypothetical protein	NA	A0A1B0YA83	Lactobacillus_phage	100.0	1.2e-144
AZP98380.1|1030231_1030462_+	2-hydroxymuconic semialdehyde hydrolase	NA	U5U783	Lactobacillus_phage	100.0	7.2e-37
AZQ00294.1|1030530_1030626_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98381.1|1030717_1031497_-	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	100.0	9.1e-116
AZP98382.1|1031568_1031973_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1B0Y2S4	Lactobacillus_phage	100.0	2.1e-76
AZP98383.1|1031969_1032296_-	XRE family transcriptional regulator	NA	A0A1B0Y3N1	Lactobacillus_phage	100.0	3.4e-56
AZP98384.1|1032552_1032765_+	helix-turn-helix domain-containing protein	NA	A0A1B0YC38	Lactobacillus_phage	100.0	3.7e-32
AZP98385.1|1032767_1033541_+	hypothetical protein	NA	A0A1B0YEA7	Lactobacillus_phage	100.0	1.3e-143
AZP98386.1|1033572_1033896_+	DUF771 domain-containing protein	NA	A0A1B0Y6D5	Lactobacillus_phage	100.0	1.2e-58
AZP98387.1|1034163_1034475_-	hypothetical protein	NA	A0A1B0YA89	Lactobacillus_phage	100.0	8.2e-52
AZP98388.1|1034535_1034727_+	hypothetical protein	NA	A0A1B0Y2S8	Lactobacillus_phage	100.0	6.4e-31
AZP98389.1|1034740_1034980_+	hypothetical protein	NA	A0A1B0Y2S6	Lactobacillus_phage	100.0	7.7e-34
AZP98390.1|1034984_1035479_+	hypothetical protein	NA	A0A1B0Y2S7	Lactobacillus_phage	100.0	9.9e-84
AZP98391.1|1035490_1035721_+	hypothetical protein	NA	A0A1B0Y3N2	Lactobacillus_phage	100.0	3.0e-35
AZP98392.1|1035720_1037088_+	ATP-dependent helicase	NA	A0A1B0YC45	Lactobacillus_phage	100.0	1.6e-264
AZP98393.1|1037089_1037830_+	NTP-binding protein	NA	A0A1B0YEB5	Lactobacillus_phage	100.0	4.1e-134
AZP98394.1|1037832_1038342_+	DUF669 domain-containing protein	NA	A0A1B0Y6E2	Lactobacillus_phage	100.0	4.1e-93
AZP98395.1|1038408_1039206_+	DNA primase	NA	A0A1B0Y4T1	Lactobacillus_phage	100.0	1.4e-151
AZQ00295.1|1039210_1040446_+	helicase	NA	A0A1B0Y896	Lactobacillus_phage	100.0	1.1e-237
AZP98396.1|1040720_1041035_+	VRR-NUC domain-containing protein	NA	A0A1B0YA93	Lactobacillus_phage	100.0	1.4e-54
AZP98397.1|1041041_1041326_+	hypothetical protein	NA	A0A1B0Y2T1	Lactobacillus_phage	100.0	6.8e-45
AZP98398.1|1041294_1041642_+	hypothetical protein	NA	A0A1B0Y2S9	Lactobacillus_phage	99.1	2.2e-58
AZP98399.1|1041634_1042222_+	HNH endonuclease	NA	A0A1B0Y2T0	Lactobacillus_phage	100.0	9.9e-107
AZP98400.1|1042208_1042463_+	hypothetical protein	NA	A0A1B0Y3N3	Lactobacillus_phage	100.0	2.3e-44
AZP98401.1|1042459_1042864_+	transcriptional regulator	NA	A0A1B0YC57	Lactobacillus_phage	100.0	9.3e-72
AZP98402.1|1043028_1043409_+	HNH endonuclease	NA	A0A1B0YEC6	Lactobacillus_phage	100.0	1.5e-71
AZQ00296.1|1043477_1043852_+	hypothetical protein	NA	A0A1B0YE76	Lactobacillus_phage	100.0	3.6e-62
AZP98403.1|1043854_1045585_+|terminase	terminase large subunit	terminase	A0A1B0Y6B8	Lactobacillus_phage	100.0	0.0e+00
AZP98404.1|1045603_1046839_+|portal	phage portal protein	portal	A0A1B0Y4Q9	Lactobacillus_phage	100.0	1.2e-234
AZP98405.1|1046816_1047524_+|protease	Clp protease ClpP	protease	A0A1B0Y857	Lactobacillus_phage	100.0	1.4e-128
AZP98406.1|1047528_1048758_+|capsid	phage major capsid protein	capsid	A0A1B0YA73	Lactobacillus_phage	99.8	1.6e-228
AZP98407.1|1048831_1049080_+	hypothetical protein	NA	A0A1B0Y2R9	Lactobacillus_phage	100.0	7.0e-38
AZP98408.1|1049093_1049420_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1B0Y2R7	Lactobacillus_phage	100.0	7.0e-54
AZP98409.1|1049358_1049697_+|head,tail	phage head-tail joining protein	head,tail	A0A0N7IRA3	Lactobacillus_phage	100.0	2.2e-58
AZP98410.1|1049680_1050010_+	hypothetical protein	NA	A0A1B0Y3M9	Lactobacillus_phage	100.0	3.1e-57
AZP98411.1|1049999_1050383_+	hypothetical protein	NA	A0A1B0YC24	Lactobacillus_phage	100.0	2.6e-68
AZP98412.1|1050394_1051042_+|tail	phage tail protein	tail	A0A1B0Y6C3	Lactobacillus_phage	100.0	1.2e-118
AZP98413.1|1051118_1051484_+	hypothetical protein	NA	A0A1B0Y865	Lactobacillus_phage	100.0	4.6e-62
AZP98414.1|1051745_1054916_+|tail	phage tail tape measure protein	tail	A0A1B0YA78	Lactobacillus_phage	99.9	0.0e+00
AZP98415.1|1054922_1055618_+|tail	phage tail protein	tail	A0A1B0Y2S2	Lactobacillus_phage	100.0	8.3e-129
AZP98416.1|1055614_1060018_+	hypothetical protein	NA	A0A1B0Y2S0	Lactobacillus_phage	100.0	0.0e+00
AZP98417.1|1060046_1060472_+	DUF1617 domain-containing protein	NA	A0A1B0Y2S1	Lactobacillus_phage	100.0	8.8e-73
AZP98418.1|1060474_1060744_+	hypothetical protein	NA	A0A1B0Y3N0	Lactobacillus_phage	100.0	1.3e-40
AZP98419.1|1060791_1061178_+	hypothetical protein	NA	A0A1B0YC31	Lactobacillus_phage	100.0	5.6e-66
AZP98420.1|1061158_1061365_+	hypothetical protein	NA	A0A1B0YE97	Lactobacillus_phage	100.0	1.4e-12
AZP98421.1|1061361_1061823_+|holin	phage holin	holin	A0A1B0Y6C9	Lactobacillus_phage	100.0	1.2e-70
AZP98422.1|1061824_1062877_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0Y4R9	Lactobacillus_phage	100.0	2.3e-207
AZP98423.1|1063653_1064691_+	central glycolytic genes regulator	NA	NA	NA	NA	NA
1062959:1062977	attR	TGTGCAATTTGTGTGCAAT	NA	NA	NA	NA
AZP98424.1|1064727_1065750_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AZP98425.1|1065940_1067131_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
AZP98426.1|1067205_1067961_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZP98427.1|1068009_1069314_+	enolase	NA	A0A1X9I5Z8	Streptococcus_phage	67.1	5.7e-163
AZP98428.1|1069643_1070906_+	MFS transporter	NA	A0A1B0RXG2	Streptococcus_phage	34.9	3.6e-61
AZP98429.1|1070911_1071268_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98430.1|1071356_1072928_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
AZP98431.1|1073113_1073350_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZP98432.1|1073592_1074327_+	esterase	NA	NA	NA	NA	NA
AZP98433.1|1074328_1076698_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.4	6.6e-93
AZP98434.1|1076729_1077203_+	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	60.5	1.2e-46
AZP98435.1|1077599_1078553_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZP98436.1|1078757_1080434_+	alpha-glucosidase	NA	NA	NA	NA	NA
AZP98437.1|1080430_1082176_+	alpha-glycosidase	NA	NA	NA	NA	NA
AZP98438.1|1082305_1084567_+	family 65 glycosyl hydrolase	NA	NA	NA	NA	NA
AZP98439.1|1084559_1085252_+	beta-phosphoglucomutase	NA	NA	NA	NA	NA
AZQ00297.1|1085256_1086387_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	32.4	1.4e-21
AZP98440.1|1086414_1088040_+	alpha-glucosidase	NA	NA	NA	NA	NA
AZP98441.1|1088079_1089312_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZP98442.1|1089381_1090740_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZP98443.1|1090745_1091603_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZP98444.1|1091740_1092043_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98445.1|1092032_1092221_+	transcriptional regulator	NA	NA	NA	NA	NA
AZP98446.1|1092626_1093874_-	MBL fold hydrolase	NA	NA	NA	NA	NA
AZP98447.1|1094002_1095316_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZP98448.1|1095325_1096147_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZP98449.1|1096162_1097056_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZP98450.1|1097045_1098107_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	48.9	3.1e-18
AZP98451.1|1098380_1099058_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZP98452.1|1099368_1099875_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ00298.1|1099888_1100014_-	acetyltransferase	NA	NA	NA	NA	NA
AZP98453.1|1100087_1100981_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AZP98454.1|1101100_1101787_+	uracil-DNA glycosylase	NA	A0A0S1TKU8	Elephant_endotheliotropic_herpesvirus	41.7	2.1e-39
AZP98455.1|1101908_1102886_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
AZP98456.1|1102882_1103344_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
>prophage 6
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	1197494	1238241	3022095	transposase,protease	Staphylococcus_phage(22.22%)	39	NA	NA
AZP98549.1|1197494_1198325_-|transposase	transposase	transposase	NA	NA	NA	NA
AZP98550.1|1198369_1199098_-|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	40.1	7.6e-32
AZP98551.1|1199342_1200209_+|protease	Zn-dependent protease	protease	NA	NA	NA	NA
AZP98552.1|1200205_1200640_+|protease	Zn-dependent protease	protease	NA	NA	NA	NA
AZP98553.1|1200799_1201675_-	dTDP-glucose 4,6-dehydratase	NA	NA	NA	NA	NA
AZP98554.1|1201727_1202726_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	39.8	1.8e-55
AZP98555.1|1202784_1203666_+	DUF3324 domain-containing protein	NA	NA	NA	NA	NA
AZP98556.1|1203640_1203961_+	cell surface complex protein, CscD family	NA	NA	NA	NA	NA
AZP98557.1|1203974_1205588_+	protein export cytoplasm protein SecA2 ATPase RNA helicase	NA	NA	NA	NA	NA
AZP98558.1|1205785_1207234_-	glycoside hydrolase family 1 protein	NA	NA	NA	NA	NA
AZP98559.1|1207314_1209168_-	PTS beta-glucoside transporter subunit EIIBCA	NA	NA	NA	NA	NA
AZP98560.1|1209254_1210085_-	PRD domain-containing protein	NA	NA	NA	NA	NA
AZP98561.1|1210097_1210244_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98562.1|1210582_1210732_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98563.1|1210750_1213414_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98564.1|1213724_1215464_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98565.1|1215815_1216745_-	glycosyltransferase	NA	V5USA4	Oenococcus_phage	47.7	3.9e-73
AZP98566.1|1216831_1217470_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98567.1|1217597_1218563_+	hypothetical protein	NA	NA	NA	NA	NA
AZP98568.1|1218710_1218839_+	transcription elongation factor GreAB	NA	NA	NA	NA	NA
AZP98569.1|1219522_1219723_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	1.2e-19
AZP98570.1|1219964_1220447_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZQ00302.1|1220452_1221088_+	N-acetylmuramidase	NA	A0A0A7RUS8	Clostridium_phage	47.7	8.4e-27
AZQ00303.1|1221212_1221857_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
AZP98571.1|1221863_1223192_+	purine permease	NA	Q9KX94	Enterobacteria_phage	31.7	1.6e-35
AZP98572.1|1223212_1224322_+	phosphoribosylaminoimidazole carboxylase	NA	NA	NA	NA	NA
AZP98573.1|1224391_1225687_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	28.5	4.4e-14
AZP98574.1|1225808_1226378_-	branched-chain amino acid ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZP98575.1|1226387_1227134_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98576.1|1227219_1229475_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	44.6	4.7e-157
AZP98577.1|1229940_1230546_+	VanZ family protein	NA	NA	NA	NA	NA
AZP98578.1|1230717_1231575_+	glucose transporter GlcU	NA	NA	NA	NA	NA
AZP98579.1|1231788_1233129_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZP98580.1|1233487_1234267_-	DUF1829 domain-containing protein	NA	NA	NA	NA	NA
AZP98581.1|1234368_1234656_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZP98582.1|1234837_1235368_-	hypothetical protein	NA	NA	NA	NA	NA
AZP98583.1|1235448_1236300_-	DNA/RNA endonuclease	NA	NA	NA	NA	NA
AZP98584.1|1236296_1237046_-	DNA-entry nuclease	NA	NA	NA	NA	NA
AZP98585.1|1237242_1238241_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	39.8	1.8e-55
>prophage 7
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	1997457	2022369	3022095	transposase,integrase	unidentified_phage(40.0%)	26	2001591:2001604	2022376:2022389
AZP99302.1|1997457_1998387_+|transposase	IS30-like element ISLpl1 family transposase	transposase	H7BW61	unidentified_phage	29.9	6.5e-20
AZP99303.1|1998511_1999279_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
AZP99304.1|1999591_2001187_+	surface protein, LPXTG-anchored	NA	NA	NA	NA	NA
2001591:2001604	attL	TGACTACCCCGCTC	NA	NA	NA	NA
AZP99305.1|2001887_2002217_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZP99306.1|2002593_2003238_+	DUF4767 domain-containing protein	NA	NA	NA	NA	NA
AZP99307.1|2004787_2005432_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99308.1|2005412_2005703_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99309.1|2006132_2006919_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AZP99310.1|2007617_2008139_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99311.1|2008311_2009428_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	32.6	1.0e-27
AZP99312.1|2010687_2011596_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
AZP99313.1|2011879_2012809_-|transposase	IS30-like element ISLpl1 family transposase	transposase	H7BW61	unidentified_phage	29.9	6.5e-20
AZP99314.1|2012835_2012916_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZP99315.1|2012922_2013819_-	prolyl aminopeptidase	NA	NA	NA	NA	NA
AZP99316.1|2013822_2014680_-	peptidase	NA	NA	NA	NA	NA
AZP99317.1|2014679_2015765_-	M42 family peptidase	NA	NA	NA	NA	NA
AZP99318.1|2015793_2017413_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZP99319.1|2017684_2018368_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.8	2.1e-60
AZP99320.1|2018427_2018628_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
AZP99321.1|2018653_2018857_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99322.1|2018773_2018962_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ00323.1|2019451_2019655_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AZP99323.1|2019897_2020296_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AZP99324.1|2020316_2020568_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99325.1|2020923_2021172_+	DUF3173 domain-containing protein	NA	NA	NA	NA	NA
AZP99326.1|2021175_2022369_+|integrase	site-specific integrase	integrase	A0A0S2MV79	Bacillus_phage	32.2	1.6e-39
2022376:2022389	attR	GAGCGGGGTAGTCA	NA	NA	NA	NA
>prophage 8
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	2419759	2465446	3022095	portal,bacteriocin	Streptococcus_phage(40.0%)	43	NA	NA
AZP99682.1|2419759_2421814_+|portal	portal protein	portal	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	33.3	1.2e-63
AZP99683.1|2421970_2424601_-	pyruvate, phosphate dikinase	NA	H8YJB7	Vibrio_phage	40.2	8.4e-89
AZP99684.1|2424762_2425386_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AZP99685.1|2425885_2426557_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
AZP99686.1|2427066_2428188_+	bacitracin ABC transporter permease	NA	NA	NA	NA	NA
AZP99687.1|2428201_2428486_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
AZP99688.1|2428676_2429792_-	lactate oxidase	NA	NA	NA	NA	NA
AZP99689.1|2429979_2430186_-	CsbD family protein	NA	NA	NA	NA	NA
AZP99690.1|2430335_2431526_-	phosphopentomutase	NA	NA	NA	NA	NA
AZP99691.1|2431545_2432778_-	MFS transporter	NA	NA	NA	NA	NA
AZP99692.1|2432822_2433566_-	uridine phosphorylase	NA	NA	NA	NA	NA
AZP99693.1|2433562_2434777_-	MFS transporter	NA	NA	NA	NA	NA
AZP99694.1|2434970_2436155_+	PucR family transcriptional regulator	NA	NA	NA	NA	NA
AZP99695.1|2436237_2436495_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99696.1|2436565_2436772_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99697.1|2436996_2437248_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99698.1|2437374_2437551_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ00336.1|2437575_2438808_+	MFS transporter	NA	NA	NA	NA	NA
AZP99699.1|2438886_2440143_-	gamma-glutamyl-phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	56.8	7.3e-99
AZP99700.1|2440231_2441065_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	42.4	9.6e-47
AZP99701.1|2441381_2441576_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99702.1|2441829_2442366_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99703.1|2442555_2443779_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99704.1|2444368_2445196_-	class C sortase	NA	NA	NA	NA	NA
AZP99705.1|2445202_2446762_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
AZP99706.1|2446758_2448081_-	pilus assembly protein	NA	NA	NA	NA	NA
AZP99707.1|2448082_2451088_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99708.1|2451365_2451923_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99709.1|2452017_2453214_-	DUF2075 domain-containing protein	NA	NA	NA	NA	NA
AZP99710.1|2453422_2454478_+	DUF2974 domain-containing protein	NA	NA	NA	NA	NA
AZP99711.1|2454443_2454662_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99712.1|2454748_2455378_+	XRE family transcriptional regulator	NA	A0A0S2MVM8	Bacillus_phage	37.5	1.2e-06
AZP99713.1|2455513_2455843_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AZP99714.1|2455839_2456628_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99715.1|2456680_2457469_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99716.1|2457513_2457792_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AZP99717.1|2457815_2458100_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AZP99718.1|2458293_2458590_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AZP99719.1|2458691_2460047_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99720.1|2460352_2460646_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99721.1|2460736_2461087_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99722.1|2461260_2462640_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
AZP99723.1|2465308_2465446_-|bacteriocin	bacteriocin prepeptide or inducing factor for bacteriocin synthesis	bacteriocin	NA	NA	NA	NA
>prophage 9
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	2469361	2498787	3022095	transposase,bacteriocin,protease	Indivirus(25.0%)	37	NA	NA
AZP99728.1|2469361_2469544_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
AZP99729.1|2469573_2469747_-|bacteriocin	ComC/BlpC family peptide pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
AZP99730.1|2470068_2470293_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99731.1|2470607_2470772_-	cytosolic protein	NA	NA	NA	NA	NA
AZP99732.1|2471009_2471855_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AZP99733.1|2472372_2472705_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99734.1|2472960_2473629_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AZP99735.1|2473609_2473801_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99736.1|2474119_2474455_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AZP99737.1|2474573_2475170_-	sugar O-acetyltransferase	NA	NA	NA	NA	NA
AZP99738.1|2475262_2475451_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99739.1|2475440_2475749_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99740.1|2475884_2476100_-|bacteriocin	class IIb bacteriocin	bacteriocin	NA	NA	NA	NA
AZP99741.1|2476096_2476330_-|bacteriocin	class IIb bacteriocin	bacteriocin	NA	NA	NA	NA
AZP99742.1|2476601_2477555_-	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	24.6	4.8e-10
AZP99743.1|2477759_2478494_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZP99744.1|2478519_2479683_+	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
AZP99745.1|2479824_2479989_+	acetyltransferase	NA	NA	NA	NA	NA
AZP99746.1|2480193_2481570_-	class II fumarate hydratase	NA	NA	NA	NA	NA
AZP99747.1|2481702_2482461_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99748.1|2482625_2482769_-	hypothetical protein	NA	NA	NA	NA	NA
AZP99749.1|2482752_2484360_-	divalent metal cation transporter	NA	NA	NA	NA	NA
AZP99750.1|2484747_2487465_+	cation-transporting ATPase	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	29.1	1.2e-61
AZP99751.1|2487764_2488130_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99752.1|2488283_2489657_-	MFS transporter	NA	NA	NA	NA	NA
AZP99753.1|2489696_2491226_-	copper oxidase	NA	NA	NA	NA	NA
AZP99754.1|2491227_2491407_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99755.1|2491471_2491663_+	hypothetical protein	NA	NA	NA	NA	NA
AZP99756.1|2491791_2492430_+	cation transporter	NA	NA	NA	NA	NA
AZP99757.1|2492450_2492783_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZP99758.1|2492903_2493845_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZP99759.1|2493841_2494738_-	metal ABC transporter permease	NA	NA	NA	NA	NA
AZP99760.1|2494734_2495478_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.9	1.1e-12
AZP99761.1|2495753_2497220_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZP99762.1|2497420_2497690_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
AZP99763.1|2497720_2497831_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZP99764.1|2497857_2498787_+|transposase	IS30-like element ISLpl1 family transposase	transposase	H7BW61	unidentified_phage	29.9	6.5e-20
>prophage 10
CP025499	Lactobacillus paracasei subsp. tolerans strain 7112-2 chromosome, complete genome	3022095	2975705	2987074	3022095	portal,capsid,head,tail,terminase	uncultured_Caudovirales_phage(37.5%)	17	NA	NA
AZQ00218.1|2975705_2976344_-	transcriptional regulator	NA	L0P7E1	Lactobacillus_phage	27.6	2.4e-05
AZQ00219.1|2976511_2976787_+	DNA-binding protein	NA	NA	NA	NA	NA
AZQ00220.1|2976854_2977076_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ00221.1|2977186_2977378_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ00222.1|2977424_2977715_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ00223.1|2977711_2977900_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ00224.1|2977883_2978696_+	DNA replication protein	NA	Q854C1	Mycobacterium_phage	34.2	6.7e-13
AZQ00225.1|2978708_2980295_+	DNA primase	NA	A0A1B1P7L5	Bacillus_phage	27.9	4.0e-25
AZQ00226.1|2980620_2980956_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AZQ00227.1|2980960_2981146_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ00228.1|2981142_2981565_+	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	45.4	1.2e-21
AZQ00229.1|2981681_2982152_+|terminase	phage terminase small subunit P27 family	terminase	M1PKP2	Streptococcus_phage	26.5	4.6e-06
AZQ00230.1|2982148_2983852_+|terminase	terminase	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	42.1	2.3e-116
AZQ00231.1|2983817_2983997_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ00232.1|2984001_2985183_+|portal	phage portal protein	portal	A0A2H4JB06	uncultured_Caudovirales_phage	35.5	2.8e-60
AZQ00233.1|2985169_2986726_+|capsid	phage major capsid protein	capsid	A0A2H4J9X8	uncultured_Caudovirales_phage	32.0	4.6e-34
AZQ00234.1|2986780_2987074_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
>prophage 1
CP025498	Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence	74463	0	65277	74463	transposase,holin	Staphylococcus_phage(43.75%)	58	NA	NA
AZP97341.1|9535_9787_+|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	92.8	1.5e-35
AZP97412.1|10969_11167_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZP97342.1|11366_11834_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97343.1|12107_12758_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	37.6	1.5e-18
AZP97344.1|12763_13048_+	cytosolic protein	NA	NA	NA	NA	NA
AZP97345.1|13109_13896_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AZP97346.1|13883_14207_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZP97347.1|14562_15441_+	transcription antiterminator lact	NA	NA	NA	NA	NA
AZP97348.1|15561_17295_+	PTS lactose transporter subunit IIB	NA	NA	NA	NA	NA
AZP97349.1|17321_18746_+	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
AZP97350.1|18794_19130_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
AZP97351.1|20609_21167_-	serine acetyltransferase	NA	NA	NA	NA	NA
AZP97352.1|21132_22317_-	cystathionine gamma-synthase	NA	NA	NA	NA	NA
AZP97353.1|22338_23250_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	41.7	2.8e-60
AZP97354.1|23993_27161_+	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	22.6	1.1e-21
AZP97355.1|27174_28791_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	50.3	1.3e-127
AZP97356.1|28787_29414_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	30.0	2.4e-10
AZP97357.1|29481_30268_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AZP97358.1|30276_30636_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97359.1|30641_31535_-	endonuclease	NA	NA	NA	NA	NA
AZP97360.1|31624_32308_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.8	2.1e-60
AZP97361.1|32644_33475_-	TIGR00268 family protein	NA	NA	NA	NA	NA
AZP97362.1|33499_34216_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	33.6	4.1e-22
AZP97363.1|34220_35483_-	TIGR00299 family protein	NA	NA	NA	NA	NA
AZP97364.1|35513_36254_-	1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase	NA	A0A288TYA6	Enterococcus_phage	47.2	4.7e-21
AZP97365.1|36328_37012_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.8	2.1e-60
AZP97366.1|37149_37936_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AZP97367.1|37944_38304_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97368.1|38309_39203_-	endonuclease	NA	NA	NA	NA	NA
AZP97369.1|39292_39976_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.8	2.1e-60
AZP97370.1|40312_41143_-	TIGR00268 family protein	NA	NA	NA	NA	NA
AZP97371.1|41167_41884_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	33.6	4.1e-22
AZP97372.1|41888_43151_-	TIGR00299 family protein	NA	NA	NA	NA	NA
AZP97373.1|43181_43922_-	1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase	NA	A0A288TYA6	Enterococcus_phage	47.2	4.7e-21
AZP97374.1|43996_44680_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.8	2.1e-60
AZP97375.1|44768_44957_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97376.1|44969_45128_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97377.1|45216_45615_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97378.1|45626_45893_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97379.1|45916_47440_+	DUF5011 domain-containing protein	NA	NA	NA	NA	NA
AZP97380.1|47458_47935_+	PcfB family protein	NA	NA	NA	NA	NA
AZP97381.1|47934_49830_+	type IV secretion system protein VirD4	NA	NA	NA	NA	NA
AZP97382.1|49847_50054_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97383.1|50073_50907_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97384.1|50924_51296_+	PrgI family protein	NA	NA	NA	NA	NA
AZP97385.1|51243_53700_+	conjugal transfer protein	NA	NA	NA	NA	NA
AZP97386.1|53689_56167_+	CHAP domain-containing protein	NA	A0A1X9SGZ2	Bradyrhizobium_phage	36.8	9.3e-13
AZP97387.1|56180_56705_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97388.1|56722_56953_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97389.1|56988_58134_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97390.1|58151_59126_+	DNA primase	NA	NA	NA	NA	NA
AZP97391.1|59213_59489_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97392.1|59485_59734_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97413.1|59925_60132_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
AZP97393.1|60103_62311_+	ATPase	NA	NA	NA	NA	NA
AZP97394.1|62355_63747_+	DUF3991 domain-containing protein	NA	NA	NA	NA	NA
AZP97395.1|64114_64234_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
AZP97396.1|64593_65277_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.8	2.1e-60
>prophage 2
CP025498	Lactobacillus paracasei subsp. tolerans strain 7112-2 plasmid p7112201, complete sequence	74463	70152	73042	74463		Enterococcus_phage(50.0%)	4	NA	NA
AZP97405.1|70152_70989_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	36.7	1.1e-37
AZP97406.1|70981_71371_+	hypothetical protein	NA	NA	NA	NA	NA
AZP97407.1|71415_71757_-	hypothetical protein	NA	NA	NA	NA	NA
AZP97408.1|71749_73042_-	DNA polymerase	NA	O64031	Bacillus_phage	39.9	1.3e-79
