The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP020373	Shewanella sp. TH2012, complete genome	4808629	642247	651009	4808629		Staphylococcus_phage(42.86%)	8	NA	NA
AZQ09700.1|642247_643375_-	diadenosine tetraphosphatase	NA	A0A1V0SLL4	Klosneuvirus	28.1	2.4e-16
AZQ09701.1|643574_645242_-	putative ABC transporter ATP-binding protein	NA	A0A1V0SKJ1	Klosneuvirus	28.6	2.4e-41
AZQ09702.1|645484_646738_+	Serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	55.1	1.9e-102
AZQ09703.1|646842_647292_+	Transcriptional repressor NrdR	NA	NA	NA	NA	NA
AZQ09704.1|647345_648488_+	Riboflavin biosynthesis protein RibD	NA	A0A1V0SE20	Indivirus	34.5	2.1e-52
AZQ09705.1|648525_649179_+	Riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	31.6	9.5e-26
AZQ09706.1|649289_650396_+	Riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	39.2	5.5e-66
AZQ09707.1|650532_651009_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	51.3	2.2e-32
>prophage 2
CP020373	Shewanella sp. TH2012, complete genome	4808629	673466	684130	4808629	tRNA	uncultured_Mediterranean_phage(33.33%)	8	NA	NA
AZQ09727.1|673466_674213_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.1	3.8e-71
AZQ09728.1|674209_674845_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	48.3	2.2e-35
AZQ09729.1|674867_675758_+	Murein hydrolase activator NlpD precursor	NA	NA	NA	NA	NA
AZQ09730.1|675841_676825_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	35.7	4.8e-37
AZQ09731.1|676923_679491_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	25.4	7.5e-34
AZQ09732.1|679766_680831_+	recombinase A	NA	A0A2D1GPX2	Mycobacterium_phage	62.2	4.4e-113
AZQ09733.1|680842_681280_+	Regulatory protein RecX	NA	NA	NA	NA	NA
AZQ09734.1|681508_684130_+|tRNA	Alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.6	9.0e-83
>prophage 3
CP020373	Shewanella sp. TH2012, complete genome	4808629	1007106	1017006	4808629		Faustovirus(14.29%)	10	NA	NA
AZQ09998.1|1007106_1008321_+	Cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	31.8	6.7e-33
AZQ09999.1|1008351_1008735_+	NifU-like protein	NA	A0A218MKD1	uncultured_virus	79.8	1.7e-54
AZQ10000.1|1008747_1009071_+	Iron-binding protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	45.8	2.4e-22
AZQ10001.1|1009080_1009605_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10002.1|1009662_1011522_+	Chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	39.3	2.7e-105
AZQ10003.1|1011545_1011881_+	2Fe-2S ferredoxin	NA	NA	NA	NA	NA
AZQ10004.1|1012047_1012953_+	Ribosomal protein S6 modification protein	NA	A0A1D8KN85	Synechococcus_phage	33.8	7.2e-40
AZQ10005.1|1013103_1013265_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10006.1|1013439_1013871_+	Nucleoside diphosphate kinase	NA	L7Y4C4	Megavirus	43.2	5.1e-20
AZQ10007.1|1014351_1017006_+	Vitamin B12 transporter BtuB precursor	NA	A0A0P0I887	Acinetobacter_phage	29.2	5.5e-80
>prophage 4
CP020373	Shewanella sp. TH2012, complete genome	4808629	1144233	1184538	4808629	plate,transposase,tail,head	Vibrio_phage(91.3%)	59	NA	NA
AZQ10115.1|1144233_1145007_-	putative HTH-type transcriptional regulator	NA	A0A2I7S9A5	Vibrio_phage	76.2	5.3e-68
AZQ10116.1|1145137_1145395_+	DNA-binding transcriptional regulator Nlp	NA	A0A2I7S995	Vibrio_phage	64.3	4.4e-19
AZQ10117.1|1145406_1147062_+|transposase	Bacteriophage Mu transposase	transposase	A0A2I7S9A8	Vibrio_phage	78.0	3.7e-252
AZQ10118.1|1147294_1149046_-|tail	Phage-related minor tail protein	tail	M4MHE6	Vibrio_phage	59.5	6.9e-188
AZQ10119.1|1149095_1149998_-|head	Mu-like prophage major head subunit gpT	head	A0A0A1IWZ9	Pseudomonas_phage	47.3	1.6e-71
AZQ10120.1|1150000_1150816_-	Mu-like prophage I protein	NA	A0A2P9JZJ0	Alteromonadaceae_phage	41.4	9.7e-36
AZQ10121.1|1150927_1151299_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ10122.1|1151299_1151683_-	Mor transcription activator family protein	NA	A0A0C4UR27	Shigella_phage	28.4	7.1e-05
AZQ10123.1|1151695_1152178_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ10124.1|1152298_1152625_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ10125.1|1152621_1153077_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ10126.1|1154131_1154500_+	hypothetical protein	NA	A0A2I7S9A8	Vibrio_phage	63.1	4.2e-31
AZQ10127.1|1154534_1155479_+	hypothetical protein	NA	M4M9P4	Vibrio_phage	78.2	7.3e-136
AZQ10128.1|1155486_1155657_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10129.1|1155661_1155883_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10130.1|1155884_1156205_+	hypothetical protein	NA	M4MB90	Vibrio_phage	50.7	5.3e-14
AZQ10131.1|1156216_1156414_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10132.1|1156429_1157050_+	hypothetical protein	NA	M4MHH7	Vibrio_phage	71.6	1.9e-76
AZQ10133.1|1157062_1157335_+	hypothetical protein	NA	M1PJ71	Vibrio_phage	66.3	4.4e-25
AZQ10134.1|1157327_1157591_+	hypothetical protein	NA	M1NVN4	Vibrio_phage	57.1	2.3e-15
AZQ10135.1|1157544_1157751_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10136.1|1157740_1158412_+	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	38.6	5.9e-31
AZQ10137.1|1158439_1158646_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10138.1|1158672_1158930_+	hypothetical protein	NA	A0A2I7S9D2	Vibrio_phage	66.7	2.8e-21
AZQ10139.1|1158939_1159194_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10140.1|1159193_1159709_+	hypothetical protein	NA	A0A2I7S9B8	Vibrio_phage	55.3	6.5e-46
AZQ10141.1|1159705_1160236_+	Mor transcription activator family protein	NA	M4MHG9	Vibrio_phage	76.3	8.2e-52
AZQ10142.1|1160246_1160696_+	hypothetical protein	NA	A0A2I7S9E3	Vibrio_phage	54.1	1.1e-38
AZQ10143.1|1160774_1161323_+	putative Peptidoglycan domain protein	NA	A0A2I7S9B9	Vibrio_phage	70.8	3.7e-71
AZQ10144.1|1161322_1161586_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10145.1|1161570_1162167_+	hypothetical protein	NA	M4MB79	Vibrio_phage	53.9	2.3e-42
AZQ10146.1|1162166_1162385_+	Prokaryotic dksA/traR C4-type zinc finger	NA	M4MHG5	Vibrio_phage	62.9	5.1e-16
AZQ10147.1|1162384_1162708_+	hypothetical protein	NA	M4M9P7	Vibrio_phage	44.3	1.6e-13
AZQ10148.1|1162716_1163007_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	76.0	1.2e-36
AZQ10149.1|1163016_1163598_+	hypothetical protein	NA	A0A2I7S9D1	Vibrio_phage	73.7	6.4e-66
AZQ10150.1|1163624_1163909_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10151.1|1163908_1165504_+	Terminase-like family protein	NA	M1NVQ0	Vibrio_phage	73.6	6.0e-223
AZQ10152.1|1165500_1167096_+	hypothetical protein	NA	M4M9P3	Vibrio_phage	73.2	5.8e-226
AZQ10153.1|1167088_1167877_+	Phage Mu protein F like protein	NA	M4M9M5	Vibrio_phage	75.5	1.8e-119
AZQ10154.1|1168200_1169160_+	Mu-like prophage I protein	NA	M1Q578	Vibrio_phage	59.1	1.3e-103
AZQ10155.1|1169159_1170059_+|head	Mu-like prophage major head subunit gpT	head	A0A2I7S9D0	Vibrio_phage	81.0	3.9e-139
AZQ10156.1|1170136_1170397_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10157.1|1170399_1170954_+	hypothetical protein	NA	M1Q569	Vibrio_phage	56.1	3.7e-47
AZQ10158.1|1170979_1171642_+	cell envelope integrity inner membrane protein TolA	NA	M4M9M3	Vibrio_phage	62.1	5.0e-22
AZQ10159.1|1171662_1172097_+	hypothetical protein	NA	A0A2I7S9E9	Vibrio_phage	84.7	1.4e-65
AZQ10160.1|1172096_1172651_+	Phage virion morphogenesis family protein	NA	A0A2I7S9D7	Vibrio_phage	78.2	2.4e-78
AZQ10161.1|1172647_1173238_+	hypothetical protein	NA	M4MHF0	Vibrio_phage	63.8	7.2e-73
AZQ10162.1|1173318_1173504_+	hypothetical protein	NA	A0A2I7S9K4	Vibrio_phage	49.1	3.5e-10
AZQ10163.1|1173506_1174985_+|tail	Phage tail sheath protein	tail	M4M9L9	Vibrio_phage	82.9	4.5e-233
AZQ10164.1|1175002_1175356_+|tail	Phage tail tube protein	tail	A0A2I7S9D5	Vibrio_phage	75.2	2.0e-46
AZQ10165.1|1175355_1175700_+	Mu-like prophage FluMu protein gp41	NA	M1NVT1	Vibrio_phage	80.7	3.7e-45
AZQ10166.1|1175825_1177538_+|tail	Phage-related minor tail protein	tail	M4MHE6	Vibrio_phage	59.5	2.4e-177
AZQ10167.1|1177574_1178897_+	hypothetical protein	NA	M4M9N2	Vibrio_phage	65.6	1.4e-164
AZQ10168.1|1178902_1179982_+	Phage late control gene D protein (GPD)	NA	M1PVV2	Vibrio_phage	76.2	3.4e-161
AZQ10169.1|1179975_1180578_+	Bacteriophage Mu Gp45 protein	NA	M1Q572	Vibrio_phage	77.4	1.7e-82
AZQ10170.1|1180597_1181056_+	Phage protein GP46	NA	M4MB61	Vibrio_phage	75.5	4.6e-59
AZQ10171.1|1181045_1182113_+|plate	Baseplate J-like protein	plate	M4MHE1	Vibrio_phage	81.1	2.2e-165
AZQ10172.1|1182097_1182682_+	hypothetical protein	NA	M4M9M8	Vibrio_phage	76.2	5.6e-86
AZQ10173.1|1182747_1184538_+	hypothetical protein	NA	M4M9L1	Vibrio_phage	77.8	6.2e-27
>prophage 5
CP020373	Shewanella sp. TH2012, complete genome	4808629	1671836	1682939	4808629	protease,tRNA	uncultured_Caudovirales_phage(50.0%)	13	NA	NA
AZQ10574.1|1671836_1674578_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	49.6	1.7e-84
AZQ10575.1|1674601_1675213_+	Outer-membrane lipoprotein carrier protein precursor	NA	NA	NA	NA	NA
AZQ10576.1|1675222_1676551_+	Replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.3	5.4e-76
AZQ10577.1|1676543_1676918_+	Putative fluoride ion transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	42.9	1.9e-07
AZQ10578.1|1676935_1678222_+|tRNA	Serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	43.7	2.0e-96
AZQ10579.1|1678250_1678373_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ10580.1|1678468_1678807_-	Sulfurtransferase TusE	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	46.8	6.0e-24
AZQ10581.1|1678800_1679094_-	Protein TusB	NA	NA	NA	NA	NA
AZQ10582.1|1679093_1679450_-	Intracellular sulfur oxidation protein DsrF	NA	NA	NA	NA	NA
AZQ10583.1|1679459_1679879_-	Sulfurtransferase TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	42.2	4.7e-18
AZQ10584.1|1679904_1680561_-|protease	Modulator of FtsH protease YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	43.0	2.1e-33
AZQ10585.1|1680626_1681529_-	HTH-type transcriptional activator AllS	NA	NA	NA	NA	NA
AZQ10586.1|1681667_1682939_+	Inner membrane transport protein YdhC	NA	S4TR35	Salmonella_phage	24.0	1.9e-17
>prophage 6
CP020373	Shewanella sp. TH2012, complete genome	4808629	2269186	2281247	4808629		Enterobacteria_phage(25.0%)	11	NA	NA
AZQ11086.1|2269186_2269582_+	Glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	38.8	2.9e-17
AZQ11087.1|2269620_2270859_+	CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase	NA	NA	NA	NA	NA
AZQ11088.1|2270894_2271446_+	Lipoprotein NlpE precursor	NA	NA	NA	NA	NA
AZQ11089.1|2271501_2272521_-	UDP-glucose 4-epimerase	NA	A0A1V0SKV4	Klosneuvirus	28.6	1.5e-25
AZQ11090.1|2272549_2273908_-	UDP-glucose 6-dehydrogenase YwqF	NA	A0A127AXI2	Bacillus_phage	36.7	3.4e-78
AZQ11091.1|2274024_2274555_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	45.3	3.1e-43
AZQ11092.1|2274621_2275542_-	dTDP-4-dehydrorhamnose reductase	NA	A0A140G5S3	Enterobacteria_phage	33.6	3.6e-31
AZQ11093.1|2275538_2276534_-	Glucose-1-phosphate thymidylyltransferase 2	NA	K7QKA7	Escherichia_phage	65.2	6.4e-106
AZQ11094.1|2276568_2277645_-	dTDP-glucose 4,6-dehydratase 2	NA	A0A1D7XFE8	Escherichia_phage	45.0	1.4e-79
AZQ11095.1|2277876_2279136_-	Phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZQ11096.1|2279309_2281247_-	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	NA	K7Y9E1	Megavirus	27.3	1.3e-17
