The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP034545	Burkholderia cenocepacia strain YG-3 chromosome 1, complete sequence	3645818	415615	465465	3645818	protease,tail,plate	uncultured_Caudovirales_phage(60.0%)	37	NA	NA
AZQ49889.1|415615_416143_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	52.0	9.7e-21
AZQ52699.1|416465_417563_+	acyltransferase	NA	NA	NA	NA	NA
AZQ49890.1|418906_419353_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ49891.1|419511_420303_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AZQ49892.1|421027_421231_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49893.1|421332_422133_-	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZQ49894.1|422152_422368_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49895.1|422489_425669_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.6	3.5e-57
AZQ49896.1|425723_430346_+	RHS repeat protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	45.8	8.5e-44
AZQ49897.1|430354_430663_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49898.1|430898_431216_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49899.1|431316_431916_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49900.1|431929_432388_+	histidine kinase	NA	NA	NA	NA	NA
AZQ52700.1|432416_432752_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49901.1|432865_433648_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AZQ49902.1|433644_434991_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AZQ49903.1|435093_435705_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AZQ49904.1|436078_436726_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49905.1|436772_437288_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AZQ49906.1|437303_438794_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AZQ49907.1|438864_439368_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AZQ49908.1|439430_439916_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AZQ49909.1|439992_441828_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AZQ49910.1|441791_442892_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AZQ49911.1|442931_445601_+	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	32.3	7.7e-90
AZQ49912.1|445656_446778_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AZQ49913.1|446844_449406_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.7	1.8e-56
AZQ49914.1|449405_450446_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AZQ52701.1|451449_452226_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AZQ49915.1|452218_454519_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49916.1|454542_455445_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AZQ52702.1|456466_457087_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ49917.1|457333_458287_-	OmpA family protein	NA	NA	NA	NA	NA
AZQ49918.1|458291_459281_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
AZQ49919.1|459277_463210_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AZQ49920.1|463511_464357_-	M15 family peptidase	NA	NA	NA	NA	NA
AZQ49921.1|464478_465465_+|tail	phage tail protein	tail	NA	NA	NA	NA
>prophage 2
CP034545	Burkholderia cenocepacia strain YG-3 chromosome 1, complete sequence	3645818	2056429	2110314	3645818	protease,transposase,plate	Escherichia_phage(16.67%)	39	NA	NA
AZQ51268.1|2056429_2057767_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AZQ51269.1|2057763_2058897_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AZQ51270.1|2058893_2060237_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AZQ51271.1|2060233_2061253_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AZQ51272.1|2061216_2062983_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AZQ51273.1|2063002_2063431_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AZQ51274.1|2063446_2064928_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AZQ51275.1|2064968_2065472_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AZQ51276.1|2065949_2068517_+	type VI secretion system ATPase TssH	NA	A0A1C3S747	Escherichia_phage	32.8	9.7e-90
AZQ51277.1|2068529_2070092_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZQ51278.1|2070088_2070793_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
AZQ51279.1|2070780_2072220_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AZQ51280.1|2072235_2075997_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AZQ51281.1|2076082_2076835_+	DsbA family protein	NA	NA	NA	NA	NA
AZQ52779.1|2077106_2078075_+|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	34.4	9.8e-27
AZQ51282.1|2078182_2078884_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ51283.1|2079147_2081826_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ51284.1|2081840_2083928_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	27.3	6.1e-34
AZQ51285.1|2084019_2084538_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
AZQ52780.1|2086376_2088029_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AZQ51286.1|2088145_2088382_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ51287.1|2089106_2089382_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ51288.1|2089644_2090211_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
AZQ51289.1|2090330_2091071_-	3-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
AZQ51290.1|2091191_2092373_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
AZQ51291.1|2092472_2094335_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
AZQ51292.1|2094696_2095536_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
AZQ51293.1|2095542_2096748_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AZQ51294.1|2096789_2097614_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
AZQ51295.1|2097735_2099985_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	29.3	8.2e-77
AZQ51296.1|2100040_2100256_-	DUF465 domain-containing protein	NA	NA	NA	NA	NA
AZQ51297.1|2100332_2101070_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ51298.1|2101234_2103559_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
AZQ51299.1|2103671_2105588_-	potassium transporter Kup	NA	A7J6G4	Paramecium_bursaria_Chlorella_virus	32.8	5.7e-79
AZQ51300.1|2105862_2106459_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
AZQ51301.1|2106466_2107813_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	36.3	4.5e-70
AZQ51302.1|2107926_2109075_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AZQ51303.1|2109186_2109378_-	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
AZQ51304.1|2109414_2110314_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 1
CP034546	Burkholderia cenocepacia strain YG-3 chromosome 2, complete sequence	1350848	947215	953561	1350848		Escherichia_phage(57.14%)	7	NA	NA
AZQ53559.1|947215_948001_+	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	28.5	4.7e-11
AZQ53560.1|947997_948717_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	28.4	3.6e-18
AZQ53561.1|948713_950111_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	30.5	2.6e-28
AZQ53562.1|950192_951089_+	glucose-1-phosphate thymidylyltransferase	NA	A0A291LA53	Escherichia_phage	58.2	8.3e-97
AZQ53563.1|951085_951667_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.9	2.1e-48
AZQ53564.1|951663_952548_+	dTDP-4-dehydrorhamnose reductase	NA	K7QJU0	Escherichia_phage	33.6	1.1e-27
AZQ53565.1|952544_953561_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.6	2.0e-78
>prophage 1
CP034547	Burkholderia cenocepacia strain YG-3 chromosome 3, complete sequence	3039797	2440519	2497227	3039797	transposase,integrase,portal	Burkholderia_phage(46.15%)	41	2434265:2434283	2484501:2484519
2434265:2434283	attL	TTCGTGCTGGTCGCCGCGC	NA	NA	NA	NA
AZQ55974.1|2440519_2441794_+|integrase	site-specific integrase	integrase	C7BGE7	Burkholderia_phage	91.3	7.1e-235
AZQ55975.1|2442105_2443326_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ55976.1|2443500_2444715_+	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	31.1	2.0e-21
AZQ56585.1|2444898_2445177_-	AlpA family phage regulatory protein	NA	C7BGF0	Burkholderia_phage	77.2	1.5e-33
AZQ55977.1|2445233_2445443_+	hypothetical protein	NA	A9YWV5	Burkholderia_phage	69.6	1.5e-20
AZQ55978.1|2445426_2446098_-	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	43.6	2.2e-38
AZQ55979.1|2446127_2446361_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ55980.1|2446370_2446628_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ55981.1|2446629_2447748_-	hypothetical protein	NA	Q8HAK2	Burkholderia_phage	33.1	4.6e-20
AZQ55982.1|2447950_2449157_+|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	64.8	1.6e-103
AZQ55983.1|2449175_2449472_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ55984.1|2449682_2450231_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ55985.1|2450581_2451676_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AZQ55986.1|2452165_2452402_+|portal	phage portal protein	portal	Q3HR04	Burkholderia_phage	87.0	1.5e-29
AZQ55987.1|2455736_2456738_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ55988.1|2456712_2457300_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ56586.1|2457965_2459114_-|transposase	ISL3 family transposase	transposase	A9YX10	Burkholderia_phage	96.3	2.8e-214
AZQ55989.1|2459480_2460794_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ55990.1|2461070_2461640_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZQ55991.1|2461661_2462048_-	VOC family protein	NA	NA	NA	NA	NA
AZQ55992.1|2462080_2462359_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ55993.1|2462351_2462642_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ56587.1|2462846_2463584_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ55994.1|2463662_2464271_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZQ55995.1|2464482_2464926_-	DUF4902 domain-containing protein	NA	NA	NA	NA	NA
AZQ55996.1|2464999_2465719_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZQ55997.1|2465766_2466474_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	41.5	2.6e-13
AZQ55998.1|2466776_2468321_-	TolC family protein	NA	NA	NA	NA	NA
AZQ55999.1|2468307_2470383_-	FUSC family protein	NA	NA	NA	NA	NA
AZQ56000.1|2470363_2471413_-	multidrug transporter subunit MdtN	NA	NA	NA	NA	NA
AZQ56001.1|2471409_2471703_-	hypothetical protein	NA	NA	NA	NA	NA
AZQ56002.1|2472519_2473665_+	metallophosphoesterase	NA	NA	NA	NA	NA
AZQ56003.1|2473785_2474424_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	A0A2K9L4C1	Tupanvirus	38.4	1.8e-21
AZQ56004.1|2474730_2474937_+	hypothetical protein	NA	NA	NA	NA	NA
AZQ56005.1|2475236_2475668_+	type II secretion system protein GspI	NA	NA	NA	NA	NA
AZQ56006.1|2475651_2476320_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
AZQ56007.1|2476497_2478720_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AZQ56008.1|2478762_2481006_+	tetratricopeptide repeat protein	NA	D6PFH9	uncultured_phage	25.8	2.1e-11
AZQ56009.1|2481002_2483243_+	tetratricopeptide repeat protein	NA	D6PFH9	uncultured_phage	31.2	7.1e-12
AZQ56010.1|2483459_2496311_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA	NA
2484501:2484519	attR	TTCGTGCTGGTCGCCGCGC	NA	NA	NA	NA
AZQ56011.1|2496470_2497227_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
