assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003966405.1_ASM396640v1	AP018543	Enterococcus faecalis KUB3007 DNA, complete genome	1	1559137-1560227	1,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	csn2,cas2,cas1,cas9,cas3	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas1,cas9,DEDDh	Type II-B,Type II-C,Type II-A	GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC,GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC,TGTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC,GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC	36,36,37,36	1	1	1559635-1559664	AP018543.1_1255940-1255969	NA:NA:NA:NA	16,16,11,11	16	TypeII-B,TypeII-C,TypeII-A	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas1,cas9,DEDDh,RT	NA|107aa|up_9|AP018543.1_1550874_1551195_+,NA	NA|107aa|up_9|AP018543.1_1550874_1551195_+	NA	NA|119aa|up_8|AP018543.1_1551229_1551586_-	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV	NA|108aa|up_7|AP018543.1_1551585_1551909_-	pfam04024, PspC, PspC domain	NA|562aa|up_6|AP018543.1_1551983_1553669_-	COG3595, COG3595, Uncharacterized conserved protein [Function unknown]	NA|226aa|up_5|AP018543.1_1553794_1554472_-	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU	NA|253aa|up_4|AP018543.1_1554486_1555245_-	PRK14255, PRK14255, phosphate ABC transporter ATP-binding protein; Provisional	NA|270aa|up_3|AP018543.1_1555255_1556065_-	PRK14237, PRK14237, phosphate transporter ATP-binding protein; Provisional	NA|295aa|up_2|AP018543.1_1556081_1556966_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|307aa|up_1|AP018543.1_1556965_1557886_-	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|285aa|up_0|AP018543.1_1558008_1558863_-	TIGR02136, ptsS_2, phosphate binding protein	csn2|353aa|down_0|AP018543.1_1560304_1561363_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|100aa|down_1|AP018543.1_1561362_1561662_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|307aa|down_2|AP018543.1_1561682_1562603_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|515aa|down_3|AP018543.1_1562808_1564353_-	pfam18061, CRISPR_Cas9_WED, CRISPR-Cas9 WED domain	cas9|611aa|down_4|AP018543.1_1564433_1566266_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|295aa|down_5|AP018543.1_1566713_1567598_-	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|229aa|down_6|AP018543.1_1567590_1568277_-	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|328aa|down_7|AP018543.1_1568382_1569366_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|846aa|down_8|AP018543.1_1569560_1572098_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|190aa|down_9|AP018543.1_1572353_1572923_-	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]
GCA_003966405.1_ASM396640v1	AP018543	Enterococcus faecalis KUB3007 DNA, complete genome	2	1806517-1806816	2,2	CRISPRCasFinder,CRT	no		WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas1,cas9,DEDDh	Orphan	GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC,GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC	36,36	0	0	NA	NA	II-A,II-B:II-A,II-B	4,4	4	Orphan	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas1,cas9,DEDDh,RT	NA,NA|50aa|down_6|AP018543.1_1813042_1813192_-	NA|250aa|up_9|AP018543.1_1792417_1793167_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|234aa|up_8|AP018543.1_1793284_1793986_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|808aa|up_7|AP018543.1_1794116_1796540_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|404aa|up_6|AP018543.1_1796853_1798065_-	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|302aa|up_5|AP018543.1_1798093_1798999_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|327aa|up_4|AP018543.1_1799120_1800101_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|589aa|up_3|AP018543.1_1800180_1801947_-	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|578aa|up_2|AP018543.1_1801943_1803677_-	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit	NA|338aa|up_1|AP018543.1_1803681_1804695_-	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|473aa|up_0|AP018543.1_1804691_1806110_-	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|288aa|down_0|AP018543.1_1806973_1807837_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|750aa|down_1|AP018543.1_1807921_1810171_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|122aa|down_2|AP018543.1_1810133_1810499_-	pfam06279, DUF1033, Protein of unknown function (DUF1033)	NA|190aa|down_3|AP018543.1_1810596_1811166_-	pfam13305, WHG, WHG domain	NA|172aa|down_4|AP018543.1_1811298_1811814_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|413aa|down_5|AP018543.1_1811830_1813069_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|50aa|down_6|AP018543.1_1813042_1813192_-	NA	NA|375aa|down_7|AP018543.1_1813248_1814373_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|115aa|down_8|AP018543.1_1814598_1814943_-	pfam08866, DUF1831, Putative amino acid metabolism	NA|382aa|down_9|AP018543.1_1815010_1816156_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
