The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	72912	203453	5312327	transposase,protease	Ralstonia_phage(46.67%)	98	NA	NA
AZU19774.1|72912_73047_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU19775.1|73397_74495_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU19776.1|75572_76121_+	hypothetical protein	NA	A0A077K814	Ralstonia_phage	63.4	4.5e-53
AZU19777.1|76303_77287_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
AZU19778.1|77509_77785_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19779.1|77846_78482_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19780.1|78677_82385_+	indolepyruvate ferredoxin oxidoreductase	NA	NA	NA	NA	NA
AZU19781.1|82482_82752_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19782.1|82767_83754_-	methyltransferase	NA	NA	NA	NA	NA
AZU19783.1|83750_85040_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19784.1|85105_86287_+	selenocysteine lyase	NA	NA	NA	NA	NA
AZU19785.1|86548_88021_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZU19786.1|88017_88755_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.6	5.2e-20
AZU23572.1|88803_89151_-	calcium-dependent protein kinase 21	NA	NA	NA	NA	NA
AZU23573.1|89188_90394_-	aminotransferase	NA	NA	NA	NA	NA
AZU19787.1|90540_91386_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.5	4.1e-05
AZU19788.1|91582_92590_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19789.1|93016_94054_+	Patatin	NA	NA	NA	NA	NA
AZU19790.1|94460_96659_-	ligand-gated channel	NA	NA	NA	NA	NA
AZU23574.1|96950_97433_-	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZU19791.1|97560_98451_+	phenylalanine-4-hydroxylase	NA	NA	NA	NA	NA
AZU19792.1|98591_99236_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19793.1|99465_100578_-	rhamnogalacturonan acetylesterase	NA	NA	NA	NA	NA
AZU19794.1|101126_101783_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19795.1|101946_102702_-	3-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
AZU19796.1|102890_103745_-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
AZU19797.1|104715_105774_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZU19798.1|105919_107503_-	xylosidase	NA	NA	NA	NA	NA
AZU19799.1|107698_108982_-	membrane protein	NA	NA	NA	NA	NA
AZU19800.1|108981_109503_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZU19801.1|109513_110512_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZU19802.1|110549_111371_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
AZU19803.1|111510_112590_+	xylanase	NA	NA	NA	NA	NA
AZU19804.1|112586_114209_+	carboxylesterase	NA	M1PNU1	Moumouvirus	32.5	8.7e-20
AZU19805.1|114253_115402_-	L-fucose dehydrogenase	NA	NA	NA	NA	NA
AZU19806.1|115469_115964_-	phosphodiesterase	NA	NA	NA	NA	NA
AZU19807.1|116151_118335_-	glycogen branching protein	NA	NA	NA	NA	NA
AZU19808.1|118346_121697_-	alpha-amylase	NA	NA	NA	NA	NA
AZU19809.1|121693_124810_-	alpha-amylase	NA	NA	NA	NA	NA
AZU19810.1|125677_126172_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZU19811.1|126179_127037_+	NmrA family transcriptional regulator	NA	NA	NA	NA	NA
AZU19812.1|128913_129897_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
AZU23575.1|130866_131085_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19813.1|131188_131404_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19814.1|131404_132214_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZU19815.1|132284_132638_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19816.1|133043_134270_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU19817.1|134625_135609_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
AZU19818.1|135994_137092_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU19819.1|137305_138532_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU19820.1|138922_142789_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19821.1|143154_145935_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AZU19822.1|146220_147243_+	2-keto-3-deoxygluconate kinase	NA	NA	NA	NA	NA
AZU19823.1|147816_149025_-	trans-2-enoyl-CoA reductase	NA	NA	NA	NA	NA
AZU19824.1|149306_152654_+	transcriptional regulator	NA	NA	NA	NA	NA
AZU19825.1|152650_153049_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19826.1|153187_153736_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19827.1|154786_155419_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZU19828.1|155415_156615_-	histidine kinase	NA	NA	NA	NA	NA
AZU19829.1|156700_157795_-	beta-lactamase	NA	NA	NA	NA	NA
AZU19830.1|158180_159347_+	lactate dehydrogenase	NA	NA	NA	NA	NA
AZU19831.1|159483_160443_-	DNA-binding protein	NA	NA	NA	NA	NA
AZU19832.1|160442_160841_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19833.1|160992_161172_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19834.1|161277_161673_-	acetaldehyde dehydrogenase	NA	NA	NA	NA	NA
AZU23576.1|161850_163380_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZU19835.1|164582_165563_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU19836.1|165625_165922_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19837.1|166128_168267_-	ligand-gated channel	NA	A0A1B0VCF0	Salmonella_phage	41.2	1.0e-68
AZU19838.1|168423_169626_+	aromatic amino acid aminotransferase	NA	NA	NA	NA	NA
AZU19839.1|169891_170902_+	fructose 1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	37.5	1.6e-48
AZU19840.1|171150_171540_+	membrane protein	NA	NA	NA	NA	NA
AZU19841.1|171894_173523_+	TldD protein	NA	NA	NA	NA	NA
AZU19842.1|174215_175850_+	TldD protein	NA	NA	NA	NA	NA
AZU19843.1|175864_177199_+	peptidase C69	NA	NA	NA	NA	NA
AZU19844.1|177195_178014_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19845.1|178145_179138_+	ATPase AAA	NA	NA	NA	NA	NA
AZU19846.1|179151_180048_+	von Willebrand factor A	NA	NA	NA	NA	NA
AZU19847.1|180091_181291_+	membrane protein	NA	NA	NA	NA	NA
AZU19848.1|181287_183546_+	membrane protein	NA	NA	NA	NA	NA
AZU19849.1|183703_185485_+	membrane protein	NA	NA	NA	NA	NA
AZU23577.1|185735_186383_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19850.1|186569_187361_-	peptidase	NA	NA	NA	NA	NA
AZU19851.1|187531_188005_+	ATPase	NA	NA	NA	NA	NA
AZU19852.1|188340_189831_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	31.4	5.5e-53
AZU19853.1|190363_190693_-	thioredoxin	NA	NA	NA	NA	NA
AZU19854.1|190713_191112_-	attachment protein	NA	NA	NA	NA	NA
AZU23578.1|191493_195216_-|protease	Zn-dependent protease with chaperone function	protease	NA	NA	NA	NA
AZU19855.1|195499_195970_-	DNA mismatch repair protein MutT	NA	NA	NA	NA	NA
AZU19856.1|196043_197024_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU19857.1|197364_198021_+	NAD-dependent dehydratase	NA	NA	NA	NA	NA
AZU19858.1|199196_199508_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23579.1|199809_200340_-	ATPase	NA	NA	NA	NA	NA
AZU19859.1|200393_200522_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19860.1|200549_201716_+	histidine kinase	NA	NA	NA	NA	NA
AZU19861.1|201957_202146_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19862.1|202189_202405_+	hypothetical protein	NA	NA	NA	NA	NA
AZU19863.1|202469_203453_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
>prophage 2
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	348334	393343	5312327	transposase	Bacillus_phage(42.86%)	40	NA	NA
AZU19983.1|348334_349432_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU19984.1|350613_351282_-	hypothetical protein	NA	NA	NA	NA	NA
AZU19985.1|351552_352440_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZU19986.1|352536_353817_+	MFS transporter	NA	NA	NA	NA	NA
AZU19987.1|353836_354265_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZU19988.1|354353_355289_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZU19989.1|355542_356424_+	NAD-dependent deacetylase	NA	A0A068EPD4	Bacillus_phage	22.5	1.5e-13
AZU19990.1|356483_357602_+	oxidoreductase	NA	NA	NA	NA	NA
AZU19991.1|357636_358515_+	oxidoreductase	NA	NA	NA	NA	NA
AZU19992.1|358729_359122_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23589.1|359359_360211_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZU19993.1|360340_361024_-	transcriptional regulator	NA	W8CYM9	Bacillus_phage	34.4	4.9e-33
AZU19994.1|361020_362400_-	histidine kinase	NA	W8CYF6	Bacillus_phage	27.4	3.7e-27
AZU19995.1|362560_363784_+	hemolysin D	NA	NA	NA	NA	NA
AZU19996.1|363793_366943_+	multidrug transporter	NA	NA	NA	NA	NA
AZU19997.1|366942_368382_+	transporter	NA	NA	NA	NA	NA
AZU19998.1|368594_370553_-	conditioned medium factor	NA	NA	NA	NA	NA
AZU19999.1|370976_371870_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
AZU20000.1|371978_372644_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20001.1|372643_373558_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZU20002.1|373747_374335_+	NADH-dependent FMN reductase	NA	NA	NA	NA	NA
AZU20003.1|374497_375481_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20004.1|375509_376538_+	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	NA	NA	NA	NA	NA
AZU23590.1|376742_377699_-	2-keto-3-deoxygluconate permease	NA	NA	NA	NA	NA
AZU20005.1|377852_379310_-	porin	NA	NA	NA	NA	NA
AZU20006.1|380140_381019_-	NmrA family transcriptional regulator	NA	NA	NA	NA	NA
AZU20007.1|381155_381587_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20008.1|381796_382093_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20009.1|382141_382672_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20010.1|382729_383017_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20011.1|383381_384362_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU23591.1|384600_385032_-	ATPase	NA	NA	NA	NA	NA
AZU20012.1|385205_386303_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU20013.1|386784_387168_-	integron gene cassette protein	NA	NA	NA	NA	NA
AZU20014.1|387296_387647_+	hypothetical protein	NA	A0A218MND5	uncultured_virus	58.5	1.3e-08
AZU20015.1|387609_388836_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU20016.1|389904_390156_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23592.1|390250_390580_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20017.1|391135_392233_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU20018.1|392362_393343_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
>prophage 3
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	1221693	1326386	5312327	transposase,protease	Ralstonia_phage(17.39%)	86	NA	NA
AZU20644.1|1221693_1222320_+|protease	Clp protease ClpP	protease	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
AZU20645.1|1222445_1223732_+|protease	Clp protease ATP-binding protein	protease	G3M9Z9	Bacillus_virus	59.9	5.3e-137
AZU20646.1|1223875_1226347_+	DNA-binding protein	NA	A0A0R6PGP8	Moraxella_phage	52.2	2.2e-224
AZU20647.1|1226560_1226833_+	transcriptional regulator HU subunit alpha	NA	A7KV42	Bacillus_phage	64.0	2.2e-21
AZU20648.1|1227471_1229442_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZU20649.1|1230071_1231250_-	lytic transglycosylase	NA	NA	NA	NA	NA
AZU20650.1|1231246_1232014_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZU20651.1|1232026_1232683_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20652.1|1232710_1233163_+	ribonuclease H	NA	J9Q745	Salmonella_phage	52.9	1.8e-39
AZU20653.1|1233171_1233906_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	40.6	1.1e-35
AZU20654.1|1234202_1234907_-	protein phosphatase	NA	NA	NA	NA	NA
AZU20655.1|1235449_1235854_+	hypothetical protein	NA	A0A1C9C5K8	Heterosigma_akashiwo_virus	35.9	1.1e-16
AZU20656.1|1236044_1237094_-	ADP-heptose--LPS heptosyltransferase	NA	NA	NA	NA	NA
AZU20657.1|1237114_1237864_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA	NA
AZU20658.1|1237863_1238613_+	beta-lactamase	NA	A0A0A0RUN7	Bacillus_phage	26.0	1.4e-09
AZU20659.1|1238612_1239644_+	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA	NA
AZU20660.1|1239640_1240021_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23640.1|1240046_1240544_+	molybdenum cofactor biosynthesis protein MoaC	NA	NA	NA	NA	NA
AZU20661.1|1240540_1240786_+	molybdopterin biosynthesis protein D chain	NA	NA	NA	NA	NA
AZU20662.1|1240782_1241229_+	molybdopterin-converting factor chain 2	NA	NA	NA	NA	NA
AZU20663.1|1241566_1241863_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20664.1|1242189_1242426_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20665.1|1242435_1243269_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20666.1|1243258_1243804_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23641.1|1243800_1244157_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20667.1|1244218_1245316_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU20668.1|1245852_1247079_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU20669.1|1247203_1247350_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	75.0	8.9e-09
AZU20670.1|1247606_1248704_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU20671.1|1249504_1250731_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU20672.1|1251992_1254062_+	DNA polymerase III subunit gamma/tau	NA	E7DN81	Pneumococcus_phage	41.0	1.8e-46
AZU20673.1|1254068_1254389_+	nucleoid-associated protein	NA	NA	NA	NA	NA
AZU20674.1|1254487_1255081_+	recombination protein RecR	NA	NA	NA	NA	NA
AZU20675.1|1255174_1255525_+	histidine triad (HIT) protein	NA	NA	NA	NA	NA
AZU20676.1|1255644_1256178_-	membrane protein	NA	NA	NA	NA	NA
AZU20677.1|1256174_1258127_-	membrane protein	NA	NA	NA	NA	NA
AZU20678.1|1258119_1259076_-	membrane protein	NA	NA	NA	NA	NA
AZU20679.1|1259081_1260035_-	ATPase	NA	NA	NA	NA	NA
AZU20680.1|1260072_1261914_+	membrane protein	NA	NA	NA	NA	NA
AZU20681.1|1261922_1262918_+	glycosyl transferase	NA	NA	NA	NA	NA
AZU23642.1|1263163_1264750_+	membrane protein	NA	NA	NA	NA	NA
AZU20682.1|1265038_1265614_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AZU20683.1|1265724_1266234_+	characterized ACR protein	NA	NA	NA	NA	NA
AZU20684.1|1266332_1266527_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
AZU20685.1|1266617_1267595_+	3-oxoacyl-ACP synthase	NA	NA	NA	NA	NA
AZU20686.1|1267836_1268277_+	MEKHLA domain-containing protein	NA	NA	NA	NA	NA
AZU20687.1|1268555_1269500_+	malonyl CoA-ACP transacylase	NA	NA	NA	NA	NA
AZU20688.1|1269582_1270326_+	3-ketoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	28.5	9.9e-11
AZU20689.1|1270530_1270770_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	44.6	5.9e-10
AZU20690.1|1270911_1272147_+	3-oxoacyl-ACP synthase	NA	NA	NA	NA	NA
AZU20691.1|1272312_1273668_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20692.1|1273728_1274802_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
AZU20693.1|1274798_1275758_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AZU20694.1|1275754_1276108_+	pilus assembly protein PilZ	NA	NA	NA	NA	NA
AZU20695.1|1276738_1277065_+	lipoprotein	NA	NA	NA	NA	NA
AZU20696.1|1277297_1278899_-	propanediol utilization protein	NA	NA	NA	NA	NA
AZU23643.1|1279043_1279940_+	2-methylisocitrate lyase	NA	NA	NA	NA	NA
AZU20697.1|1280015_1281170_+	methylcitrate synthase	NA	NA	NA	NA	NA
AZU20698.1|1281327_1283922_+	aconitate hydratase	NA	NA	NA	NA	NA
AZU20699.1|1284602_1285802_+	3-methylitaconate isomerase	NA	NA	NA	NA	NA
AZU20700.1|1286016_1288233_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZU20701.1|1288310_1289309_+	nucleoside hydrolase	NA	NA	NA	NA	NA
AZU20702.1|1290012_1294935_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20703.1|1295157_1298145_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZU20704.1|1298292_1299240_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	36.0	3.8e-07
AZU20705.1|1299644_1302065_+	penicillin-binding protein	NA	NA	NA	NA	NA
AZU20706.1|1302412_1302973_-	bacterioferritin	NA	NA	NA	NA	NA
AZU20707.1|1303015_1303498_-	peroxiredoxin	NA	A0A1D8KSL1	Synechococcus_phage	38.3	7.0e-26
AZU20708.1|1303660_1304137_+	heat shock protein	NA	NA	NA	NA	NA
AZU20709.1|1304548_1305448_+	cytochrome C biogenesis protein	NA	A0A2L0UZR4	Agrobacterium_phage	28.0	7.0e-19
AZU20710.1|1305944_1306331_+	chemotaxis protein CheY	NA	W8CYM9	Bacillus_phage	31.8	5.6e-10
AZU20711.1|1307029_1308157_+	membrane protein	NA	NA	NA	NA	NA
AZU20712.1|1308156_1309020_+|protease	membrane protease HflC	protease	NA	NA	NA	NA
AZU23644.1|1309242_1309707_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU20713.1|1310269_1311562_+	adenylosuccinate synthetase	NA	A0A2R8FF47	Brazilian_cedratvirus	38.4	5.8e-75
AZU20714.1|1314857_1315010_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20715.1|1315323_1316037_-	oxidoreductase	NA	NA	NA	NA	NA
AZU20716.1|1316107_1316698_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZU20717.1|1317955_1319182_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU23645.1|1319282_1320812_+	N-6 DNA methylase	NA	A0A2H4PQP4	Staphylococcus_phage	29.7	3.0e-46
AZU20718.1|1320822_1321230_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20719.1|1321901_1322882_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU23646.1|1323160_1323871_+	HsdS protein	NA	NA	NA	NA	NA
AZU20720.1|1323867_1324614_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20721.1|1324613_1325288_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20722.1|1325402_1326386_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
>prophage 4
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	1424636	1490966	5312327	transposase,integrase,tRNA	uncultured_virus(33.33%)	53	1445880:1445939	1488217:1489547
AZU20789.1|1424636_1425551_-|tRNA	arginyl-tRNA-protein transferase	tRNA	NA	NA	NA	NA
AZU20790.1|1425591_1426191_+	calcium-binding protein	NA	NA	NA	NA	NA
AZU23653.1|1426358_1426814_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20791.1|1427064_1427577_-	pathogenicity-like protein	NA	NA	NA	NA	NA
AZU20792.1|1427809_1428715_-	palmitoyl-CoA hydrolase	NA	NA	NA	NA	NA
AZU20793.1|1428785_1429556_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZU20794.1|1429621_1430050_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20795.1|1430166_1430571_-	thioesterase	NA	NA	NA	NA	NA
AZU20796.1|1430570_1433537_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	55.9	1.2e-306
AZU20797.1|1433829_1434150_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
AZU20798.1|1434162_1434423_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
AZU20799.1|1434656_1435724_+	GTPase CgtA	NA	NA	NA	NA	NA
AZU20800.1|1435815_1436085_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZU20801.1|1436201_1437794_+	membrane protein	NA	NA	NA	NA	NA
AZU20802.1|1437983_1439006_+	riboflavin kinase	NA	NA	NA	NA	NA
AZU20803.1|1439012_1441844_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SGW1	Hokovirus	22.1	5.4e-41
AZU20804.1|1442156_1442675_+	peptidase A8	NA	NA	NA	NA	NA
AZU23654.1|1442741_1443692_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA	NA
AZU20805.1|1444221_1444554_-	membrane protein	NA	NA	NA	NA	NA
AZU23655.1|1445265_1445559_-	hypothetical protein	NA	NA	NA	NA	NA
1445880:1445939	attL	TGGGGCGTGTCCTAGATTTTGTGTAACCGGGCCACAGGCAGGAGACTGCCACCTAACCCG	NA	NA	NA	NA
AZU20806.1|1445947_1447174_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU20807.1|1448039_1448471_-|integrase	integrase	integrase	NA	NA	NA	NA
AZU20808.1|1448958_1449894_+	cytochrome C oxidase subunit II	NA	NA	NA	NA	NA
AZU20809.1|1449893_1451894_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZU23656.1|1451896_1452523_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZU20810.1|1452522_1452858_+	cytochrome C oxidase	NA	NA	NA	NA	NA
AZU20811.1|1455127_1456519_+	DNA repair protein RadA	NA	NA	NA	NA	NA
AZU20812.1|1456988_1457168_-	hypothetical protein	NA	NA	NA	NA	NA
AZU20813.1|1457211_1458438_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU20814.1|1458418_1459504_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	53.8	5.8e-36
AZU23657.1|1459617_1459995_+	membrane protein	NA	NA	NA	NA	NA
AZU20815.1|1460474_1461266_-	transcriptional regulator	NA	NA	NA	NA	NA
AZU20816.1|1462097_1463528_+	DNA-binding protein	NA	NA	NA	NA	NA
AZU20817.1|1463737_1465606_+	histidine kinase	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	22.3	1.8e-16
AZU20818.1|1465630_1467955_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20819.1|1468619_1469462_+	polyvinylalcohol dehydrogenase	NA	NA	NA	NA	NA
AZU20820.1|1469463_1469826_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
AZU20821.1|1469822_1470218_+	anti-sigma regulatory factor	NA	NA	NA	NA	NA
AZU20822.1|1470208_1471219_+	transcriptional regulator	NA	NA	NA	NA	NA
AZU20823.1|1471215_1472088_+	histidine kinase	NA	A0A2K9L0Z8	Tupanvirus	29.1	1.4e-24
AZU20824.1|1472077_1474027_+	histidine kinase	NA	NA	NA	NA	NA
AZU20825.1|1476083_1478453_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZU20826.1|1478559_1479006_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	37.0	2.1e-08
AZU20827.1|1479179_1479545_-	RNA signal recognition particle 4.5S RNA	NA	NA	NA	NA	NA
AZU20828.1|1479629_1479938_+	hypothetical protein	NA	NA	NA	NA	NA
AZU20829.1|1479911_1481042_-	histidine kinase	NA	W8CYM9	Bacillus_phage	32.0	9.7e-10
AZU20830.1|1481038_1481623_-	chemotaxis protein CheB	NA	NA	NA	NA	NA
AZU20831.1|1481619_1482444_-	chemotaxis protein CheR	NA	NA	NA	NA	NA
AZU20832.1|1482440_1485614_-	histidine kinase	NA	A0A1V0SGX0	Hokovirus	41.3	1.0e-32
AZU20833.1|1485774_1486938_+	transcriptional regulator	NA	NA	NA	NA	NA
AZU20834.1|1486930_1487299_+	chemotaxis protein CheY	NA	NA	NA	NA	NA
AZU20835.1|1488284_1489511_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU20836.1|1489985_1490966_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
1488217:1489547	attR	TGGGGCGTGTCCTAGATTTTGTGTAACCGGGCCACAGGCAGGAGACTGCCACCTAACCCGGAGACACCATGAGCCCACGCACACATGAGGTACCCGACGAGCTGCTTAGCAGCCTGTTGGTCAACTACACCAAACCCGAGGATCTGATCGGCGAGAACGGCCTGCTCAAGCAGCTGACCAAGCGGTTGGTGGAGCGGGCGCTGGACGCGGAGATGACCGAACACCTCGGTCATGACAAGCATGAGCCGGTCGCCAACGCGGCCGGCAACACGCGCAACGGACGCAGCCGCAAGACGCTCAAGGGCGAGTTCGGCGAGCTGCCGATCGAGATTCCGCGTGATCGCCACGGCAGCTTCGCGCCACAGCTGATCCCCAAGCACCAGACCCGCTGGGCCGGCTTCGATGACAAGATCTTGTCGTTGTACGCGCGCGGCATGACCGTGCGCGAGATCCAGTCGCACCTGGAGGAGATGTACGGCACCGAGGTGTCGCCGAGTCTGATTTCCTCAGTCACCGATGCGGTCGTCGAGGAGGTCAAGGCGTGGCAGGCGCGGCCACTGGATCCGGTCTATCCGATCGTCTATCTGGACTGCATCCACGTCAAAGTGCGCGAGGGCGCGGTGCGGGTCAAGGCGGTGTACCTGGCCATCGGCATCACCATGGGCGGCGAGAAGGAAGTGCTGGGCCTATGGCTGGCGCAGGCCGAGGGTGCCAAGTTTTGGCTGCAAGTCGTGACGGAGCTACGCAACCGCGGGGTGCAGGACATCTTCATTGCCTGCGTCGATGGCCTGAAGGGGTTTCCCGAGGCGATCGAGGCGGTGTTCCCGCAGACCACCGTGCAGCTGTGCATCGTGCACATGGTGCGGCACAGCCTGAACTACGTCTCGTGGAAACGCCGCGCCGAGGTTGCCGCCGATCTCAAGCGCATTTACGCCTGCGCCACCGTCGAGGAGGCCGAGCAGGCACTGACCGAGTTCGAGGCCAAGTGGGACGCCCAGTACCCGCCCATCAGCCAGTCATGGCGGCGCAATTGGTCACGACTGATCCCGTTCTTCGACTACCCACCGGAGATCCGCAAGGTGATCTATACGACCAACGCCATCGAGTCGGTCAACATGAGCCTGCGCAAGCTGACCAAGAACCGCGGCGCGTTCCCCAGCGACGAAGCCTTGATGAAACTGTTCTACCTGGCTCTGCGCAACATCACCAAGAAATGGACGCTGCCGATCCGCGACTGGAAGGCTGCGCTGAACCGCTTTACGATCCAGTTCGAGGGGCGACTTCCTCAGCGGTAACCCAAACCACGGTTACACAAAATTCTGCACACGCTC	NA	NA	NA	NA
>prophage 5
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	1705278	1777390	5312327	transposase,protease	Leptospira_phage(20.0%)	49	NA	NA
AZU20983.1|1705278_1706004_+|protease	glycoprotease	protease	NA	NA	NA	NA
AZU20984.1|1706000_1706915_+	ADP-ribosylglycohydrolase	NA	A0A1S6UB21	Serratia_phage	50.2	2.2e-68
AZU20985.1|1707201_1708077_-	energy transducer TonB	NA	NA	NA	NA	NA
AZU20986.1|1708073_1709024_-	glutathione synthetase	NA	NA	NA	NA	NA
AZU23667.1|1709260_1709662_+	pilus assembly protein PilG	NA	NA	NA	NA	NA
AZU20987.1|1709679_1710042_+	chemotaxis protein CheY	NA	A0A220YL79	Alteromonas_virus	27.7	4.1e-10
AZU20988.1|1710041_1710572_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZU20989.1|1710612_1712649_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	42.1	2.1e-23
AZU20990.1|1712762_1719950_+	chemotaxis protein CheY	NA	W8CYM9	Bacillus_phage	31.9	1.0e-11
AZU20991.1|1719957_1721145_+	chemotaxis protein	NA	NA	NA	NA	NA
AZU20992.1|1721178_1721655_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZU20993.1|1721886_1722510_+	alanine acetyltransferase	NA	NA	NA	NA	NA
AZU20994.1|1722918_1723983_+	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase	NA	NA	NA	NA	NA
AZU20995.1|1723979_1724711_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
AZU20996.1|1724815_1726531_-	leucine-rich repeat (LRR) protein	NA	NA	NA	NA	NA
AZU20997.1|1726886_1728050_-	exported exo-alpha-sialidase	NA	NA	NA	NA	NA
AZU20998.1|1728511_1728841_+	R body protein RebB-like protein	NA	NA	NA	NA	NA
AZU20999.1|1728898_1729099_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21000.1|1729357_1729624_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21001.1|1729705_1732267_+	type III secretion system effector protein	NA	NA	NA	NA	NA
AZU21002.1|1732316_1734158_-	beta-galactosidase	NA	NA	NA	NA	NA
AZU21003.1|1734389_1736732_-	alpha-mannosidase	NA	NA	NA	NA	NA
AZU21004.1|1736817_1738281_-	Tat pathway signal protein	NA	NA	NA	NA	NA
AZU21005.1|1738558_1739983_-	beta glucosidase	NA	NA	NA	NA	NA
AZU21006.1|1739979_1740897_-	ribokinase	NA	NA	NA	NA	NA
AZU21007.1|1740893_1742261_-	amino acid permease	NA	NA	NA	NA	NA
AZU21008.1|1742172_1743405_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21009.1|1744258_1747234_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AZU21010.1|1747310_1747577_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU21011.1|1747570_1748398_+|transposase	transposase	transposase	S5WIU1	Leptospira_phage	36.8	1.1e-42
AZU21012.1|1748624_1751285_-	glycoside hydrolase family 3	NA	NA	NA	NA	NA
AZU21013.1|1751805_1754496_-	beta-mannosidase	NA	NA	NA	NA	NA
AZU21014.1|1754517_1756968_-	beta-hexosaminidase	NA	NA	NA	NA	NA
AZU21015.1|1757225_1758293_-	glycosyl hydrolase	NA	A0A2P1CFB9	Microbacterium_phage	23.8	3.0e-08
AZU21016.1|1758296_1759982_-	alpha-L-fucosidase	NA	NA	NA	NA	NA
AZU21017.1|1763561_1764578_+	glucokinase	NA	NA	NA	NA	NA
AZU21018.1|1765033_1765768_-	16S rRNA methyltransferase	NA	NA	NA	NA	NA
AZU21019.1|1765758_1767177_-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	20.7	7.2e-10
AZU21020.1|1767218_1767767_+	ADP-ribose diphosphatase	NA	NA	NA	NA	NA
AZU21021.1|1767763_1768564_+	3'-5'-bisphosphate nucleotidase	NA	NA	NA	NA	NA
AZU21022.1|1768755_1769775_+	nucleoside triphosphate hydrolase	NA	NA	NA	NA	NA
AZU21023.1|1769771_1770107_+	membrane protein	NA	A0A218MNG8	uncultured_virus	56.9	1.2e-27
AZU21024.1|1771296_1772406_+	glycine cleavage system protein T	NA	NA	NA	NA	NA
AZU21025.1|1772549_1772945_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZU21026.1|1772945_1773425_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23668.1|1773948_1774368_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21027.1|1774965_1775673_-|transposase	transposase	transposase	S5WIU1	Leptospira_phage	42.1	2.5e-40
AZU21028.1|1775694_1776921_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU21029.1|1777123_1777390_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 6
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	2215844	2275720	5312327	transposase,tRNA	uncultured_Mediterranean_phage(55.56%)	45	NA	NA
AZU21382.1|2215844_2216942_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU21383.1|2219682_2220090_+	pilus assembly protein PilE	NA	NA	NA	NA	NA
AZU21384.1|2221474_2222701_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU21385.1|2223435_2224662_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU21386.1|2224932_2226954_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
AZU21387.1|2227823_2228066_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21388.1|2228102_2229776_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21389.1|2230109_2230520_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21390.1|2230644_2231676_+	conjugative transfer protein	NA	NA	NA	NA	NA
AZU21391.1|2231672_2232440_+	Type IV secretory pathway, VirB9 component	NA	NA	NA	NA	NA
AZU21392.1|2232436_2233606_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23691.1|2233620_2234661_+	type IV secretion system energizing component VirB11	NA	NA	NA	NA	NA
AZU21393.1|2234723_2235554_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21394.1|2235610_2236021_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21395.1|2236055_2236325_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21396.1|2236426_2238880_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21397.1|2238986_2239709_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21398.1|2239809_2240889_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21399.1|2241649_2242276_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23692.1|2243047_2243686_+	carboxypeptidase	NA	NA	NA	NA	NA
AZU23693.1|2243823_2244684_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21400.1|2245608_2246835_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU21401.1|2246992_2248090_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU21402.1|2248493_2250398_-	heat shock protein 90	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.7	4.6e-113
AZU21403.1|2250637_2251261_+	methyltransferase	NA	NA	NA	NA	NA
AZU21404.1|2251257_2251764_+	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	41.1	6.2e-25
AZU21405.1|2251810_2252308_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21406.1|2252540_2252825_+	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	57.0	1.1e-18
AZU21407.1|2252821_2254600_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZU21408.1|2254779_2254893_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21409.1|2254889_2256650_+	cellulase	NA	NA	NA	NA	NA
AZU21410.1|2256951_2257584_-	Uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZU21411.1|2257735_2260294_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZU21412.1|2260290_2261412_+	phytase	NA	NA	NA	NA	NA
AZU21413.1|2261408_2262788_+	phosphoesterase	NA	NA	NA	NA	NA
AZU21414.1|2263161_2263869_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21415.1|2264220_2265717_-	lysine 6-aminotransferase	NA	NA	NA	NA	NA
AZU21416.1|2265735_2265840_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21417.1|2265839_2266271_+	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZU21418.1|2266426_2267497_+|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AZU21419.1|2267578_2268724_+|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.6	1.4e-85
AZU21420.1|2268855_2269209_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
AZU21421.1|2269399_2271244_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
AZU21422.1|2271303_2272272_+	preprotein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	29.5	2.0e-27
AZU21423.1|2274493_2275720_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
>prophage 7
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	2655247	2718597	5312327	coat,transposase,capsid	Xanthomonas_phage(62.96%)	62	NA	NA
AZU21670.1|2655247_2655676_-	hypothetical protein	NA	A0A077JCZ5	Xanthomonas_phage	76.8	1.3e-52
AZU21671.1|2655803_2656028_+	hypothetical protein	NA	A0A1D6ZIV2	Xanthomonas_phage	78.5	2.1e-17
AZU21672.1|2656024_2656207_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21673.1|2656199_2657309_+	replication protein	NA	S0F3I3	Stenotrophomonas_phage	75.0	1.0e-160
AZU21674.1|2657305_2657602_+	single-stranded DNA-binding protein	NA	B1NI78	Stenotrophomonas_phage	66.3	1.9e-26
AZU21675.1|2657605_2657857_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21676.1|2657888_2658017_+|capsid	capsid protein	capsid	NA	NA	NA	NA
AZU23712.1|2658953_2659193_+	filamentous phage phiLf adsorption protein III	NA	Q9XJ91	Xanthomonas_phage	93.7	3.1e-35
AZU21677.1|2659203_2659524_+|coat	minor coat protein	coat	Q4LAU3	Stenotrophomonas_phage	44.2	3.5e-21
AZU21678.1|2659525_2660848_+	filamentous phage phiLf protein I	NA	Q4LAU4	Stenotrophomonas_phage	56.5	1.2e-131
AZU21679.1|2660867_2661179_-	chloride channel protein	NA	A0A1W6DXV7	Xanthomonas_phage	92.2	1.0e-49
AZU21680.1|2661653_2662040_-	hypothetical protein	NA	A0A077JCZ5	Xanthomonas_phage	68.9	1.2e-36
AZU21681.1|2662752_2663691_+	replication initiation protein	NA	A0A077JDC0	Xanthomonas_phage	88.8	5.3e-163
AZU21682.1|2663687_2663984_+	DNA-binding protein	NA	A0A1W6DXU2	Xanthomonas_phage	92.9	3.7e-46
AZU21683.1|2664222_2664462_+	membrane protein	NA	NA	NA	NA	NA
AZU21684.1|2664597_2666025_+	hypothetical protein	NA	A0A1D6ZIU5	Xanthomonas_phage	42.3	1.5e-55
AZU21685.1|2666026_2666347_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21686.1|2666343_2667528_+	zonular occludens toxin family protein	NA	A0A1W6DXR3	Xanthomonas_phage	37.8	4.2e-56
AZU21687.1|2667524_2668205_+	conjugal transfer protein	NA	A0A1W6DY89	Xanthomonas_phage	59.6	5.2e-67
AZU21688.1|2668220_2668613_+	hypothetical protein	NA	A0A077JCA3	Xanthomonas_phage	60.0	7.2e-37
AZU23713.1|2668649_2668988_-	phage-like protein	NA	Q38057	Xanthomonas_phage	77.7	7.3e-46
AZU21689.1|2669170_2669497_+	hypothetical protein	NA	S0F2N2	Stenotrophomonas_phage	40.9	1.2e-16
AZU21690.1|2669533_2670208_-	conjugal transfer protein	NA	A0A1W6DY89	Xanthomonas_phage	57.7	1.1e-66
AZU21691.1|2670204_2671389_-	zonular occludens toxin family protein	NA	A0A1W6DXR3	Xanthomonas_phage	37.8	4.2e-56
AZU21692.1|2671385_2671706_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21693.1|2671707_2673135_-	hypothetical protein	NA	A0A1D6ZIU5	Xanthomonas_phage	42.3	1.5e-55
AZU21694.1|2673270_2673510_-	membrane protein	NA	NA	NA	NA	NA
AZU21695.1|2673748_2674045_-	DNA-binding protein	NA	A0A1W6DXU2	Xanthomonas_phage	92.9	3.7e-46
AZU21696.1|2674041_2674980_-	replication initiation protein	NA	A0A077JDC0	Xanthomonas_phage	88.8	5.3e-163
AZU21697.1|2675688_2676108_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21698.1|2676336_2677140_-	ketoacyl reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	25.6	2.0e-09
AZU21699.1|2677182_2678709_-	ribonuclease BN	NA	NA	NA	NA	NA
AZU21700.1|2680332_2681001_-	glycosyl transferase	NA	NA	NA	NA	NA
AZU21701.1|2680997_2681600_-	methyltransferase	NA	NA	NA	NA	NA
AZU21702.1|2681596_2682355_-	N- acetylglucosaminylphosphatidylinositol deacetylase	NA	NA	NA	NA	NA
AZU21703.1|2682342_2682861_-	dehydrogenase	NA	NA	NA	NA	NA
AZU21704.1|2683727_2684336_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZU21705.1|2684593_2685073_-	blue light sensor protein	NA	NA	NA	NA	NA
AZU23714.1|2685403_2685820_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21706.1|2686779_2688600_-	transmembrane repetitive protein	NA	NA	NA	NA	NA
AZU21707.1|2688613_2689213_-	Fe/S biogenesis protein NfuA	NA	NA	NA	NA	NA
AZU21708.1|2689301_2689658_+	pterin-4-alpha-carbinolamine dehydratase	NA	NA	NA	NA	NA
AZU21709.1|2689654_2690077_+	energy transducer TonB	NA	NA	NA	NA	NA
AZU21710.1|2690342_2691161_+	zinc transporter ZupT	NA	NA	NA	NA	NA
AZU21711.1|2691499_2692483_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
AZU21712.1|2692619_2694431_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21713.1|2694463_2695450_-	23S rRNA pseudouridylate synthase	NA	NA	NA	NA	NA
AZU21714.1|2695859_2699510_+	ribonuclease E	NA	NA	NA	NA	NA
AZU21715.1|2700035_2700683_-	response regulator	NA	NA	NA	NA	NA
AZU21716.1|2700922_2701669_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21717.1|2701770_2702136_-	membrane protein	NA	NA	NA	NA	NA
AZU21718.1|2702195_2702627_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZU21719.1|2702637_2703930_+	NAD(FAD)-utilizing dehydrogenase	NA	NA	NA	NA	NA
AZU21720.1|2703886_2705179_-	UDP-N-acetyl-D-galactosamine dehydrogenase	NA	NA	NA	NA	NA
AZU21721.1|2706418_2706832_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21722.1|2706883_2708110_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU21723.1|2708163_2708736_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21724.1|2710934_2711717_-|transposase	transposase	transposase	S5WIU1	Leptospira_phage	41.6	3.5e-43
AZU21725.1|2711877_2712843_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21726.1|2712929_2714111_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23715.1|2714103_2716203_-	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZU21727.1|2717370_2718597_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
>prophage 8
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	2729276	2784821	5312327	integrase,transposase	Acanthamoeba_polyphaga_mimivirus(25.0%)	54	2717335:2717394	2742540:2743868
2717335:2717394	attL	GAGCGTGTGCAGAATTTTGTGTAACCGTGGTTTGGGTTACCGCTGAGGAAGTCGCCCCTC	NA	NA	NA	NA
AZU21737.1|2729276_2729810_+|integrase	integrase	integrase	NA	NA	NA	NA
AZU21738.1|2729883_2730324_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
AZU21739.1|2730603_2732616_+	DNA topoisomerase III	NA	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	23.6	1.7e-12
AZU21740.1|2734480_2735140_-	SanC	NA	NA	NA	NA	NA
AZU21741.1|2735166_2736375_-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	NA	NA	NA	NA	NA
AZU21742.1|2736406_2737450_-	sulfotransferase	NA	NA	NA	NA	NA
AZU23716.1|2737442_2738144_-	clavaminate synthase	NA	NA	NA	NA	NA
AZU21743.1|2738881_2740159_+	murein transglycosylase	NA	NA	NA	NA	NA
AZU21744.1|2740243_2741302_+	avirulence protein	NA	NA	NA	NA	NA
AZU21745.1|2741442_2742393_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	61.5	2.1e-98
AZU21746.1|2742575_2743802_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU21747.1|2744531_2744744_+	hypothetical protein	NA	NA	NA	NA	NA
2742540:2743868	attR	GAGCGTGTGCAGAATTTTGTGTAACCGTGGTTTGGGTTACCGCTGAGGAAGTCGCCCCTCGAACTGGATCGTAAAGCGGTTCAGCGCAGCCTTCCAGTCGCGGATCGGCAGCGTCCATTTCTTGGTGATGTTGCGCAGAGCCAGGTAGAACAGTTTCATCAAGGCTTCGTCGCTGGGGAACGCGCCGCGGTTCTTGGTCAGCTTGCGCAGGCTCATGTTGACCGACTCGATGGCGTTGGTCGTATAGATCACCTTGCGGATCTCCGGTGGGTAGTCGAAGAACGGGATCAGTCGTGACCAATTGCGCCGCCATGACTGGCTGATGGGCGGGTACTGGGCGTCCCACTTGGCCTCGAACTCGGTCAGTGCCTGCTCGGCCTCCTCGACGGTGGCGCAGGCGTAAATGCGCTTGAGATCGGCGGCAACCTCGGCGCGGCGTTTCCACGAGACGTAGTTCAGGCTGTGCCGCACCATGTGCACGATGCACAGCTGCACGGTGGTCTGCGGGAACACCGCCTCGATCGCCTCGGGAAACCCCTTCAGGCCATCGACGCAGGCAATGAAGATGTCCTGCACCCCGCGGTTGCGTAGCTCCGTCACGACTTGCAGCCAAAACTTGGCACCCTCGGCCTGCGCCAGCCATAGGCCCAGCACTTCCTTCTCGCCGCCCATGGTGATGCCGATGGCCAGGTACACCGCCTTGACCCGCACCGCGCCCTCGCGCACTTTGACGTGGATGCAGTCCAGATAGACGATCGGATAGACCGGATCCAGTGGCCGCGCCTGCCACGCCTTGACCTCCTCGACGACCGCATCGGTGACTGAGGAAATCAGACTCGGCGACACCTCGGTGCCGTACATCTCCTCCAGGTGCGACTGGATCTCGCGCACGGTCATGCCGCGCGCGTACAACGACAAGATCTTGTCATCGAAGCCGGCCCAGCGGGTCTGGTGCTTGGGGATCAGCTGTGGCGCGAAGCTGCCGTGGCGATCACGCGGAATCTCGATCGGCAGCTCGCCGAACTCGCCCTTGAGCGTCTTGCGGCTGCGTCCGTTGCGCGTGTTGCCGGCCGCGTTGGCGACCGGCTCATGCTTGTCATGACCGAGGTGTTCGGTCATCTCCGCGTCCAGCGCCCGCTCCACCAACCGCTTGGTCAGCTGCTTGAGCAGGCCGTTCTCGCCGATCAGATCCTCGGGTTTGGTGTAGTTGACCAACAGGCTGCTAAGCAGCTCGTCGGGTACCTCATGTGTGCGTGGGCTCATGGTGTCTCCGGGTTAGGTGGCAGTCTCCTGCCTGTGGCCCGGTTACACAAAATCTAGGACACGCCC	NA	NA	NA	NA
AZU21748.1|2744765_2745158_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21749.1|2745337_2746024_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21750.1|2746105_2746843_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZU21751.1|2746939_2747221_+	uridylate kinase	NA	NA	NA	NA	NA
AZU21752.1|2747511_2748324_+	GTPase	NA	NA	NA	NA	NA
AZU21753.1|2748467_2748821_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21754.1|2748979_2749606_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21755.1|2750035_2750284_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23717.1|2750740_2751670_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21756.1|2751731_2752412_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21757.1|2752955_2753606_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21758.1|2753669_2754779_+	methyltransferase	NA	NA	NA	NA	NA
AZU21759.1|2754827_2755148_+	methyltransferase	NA	NA	NA	NA	NA
AZU21760.1|2755237_2755537_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23718.1|2755686_2757966_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZU21761.1|2758107_2758701_+	integrating conjugative element protein pill, pfgi-1	NA	NA	NA	NA	NA
AZU21762.1|2758697_2759345_+	membrane protein	NA	NA	NA	NA	NA
AZU21763.1|2759360_2760083_+	conserved protein, ly exported	NA	NA	NA	NA	NA
AZU21764.1|2760064_2760670_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZU21765.1|2760666_2761215_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21766.1|2761219_2763409_+	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AZU21767.1|2763405_2764155_+	membrane protein	NA	NA	NA	NA	NA
AZU21768.1|2764205_2766830_-	ATPase	NA	NA	NA	NA	NA
AZU21769.1|2766931_2767984_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21770.1|2767984_2768686_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21771.1|2768678_2769353_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZU21772.1|2769458_2770361_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21773.1|2770505_2770874_+	RAQPRD family plasmid	NA	NA	NA	NA	NA
AZU21774.1|2770870_2771104_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21775.1|2771120_2771480_+	conjugal transfer protein	NA	NA	NA	NA	NA
AZU21776.1|2771490_2771901_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21777.1|2771897_2772587_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21778.1|2772583_2773510_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21779.1|2773499_2774930_+	conjugal transfer protein	NA	NA	NA	NA	NA
AZU23719.1|2774910_2775354_+	conjugal transfer protein	NA	NA	NA	NA	NA
AZU21780.1|2775353_2778236_+	conjugal transfer protein	NA	NA	NA	NA	NA
AZU21781.1|2778232_2778997_+	DSBA oxidoreductase	NA	NA	NA	NA	NA
AZU21782.1|2778977_2779901_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
AZU21783.1|2779917_2780430_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21784.1|2780950_2781913_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU21785.1|2783733_2784561_-|transposase	transposase	transposase	S5WIU1	Leptospira_phage	37.2	9.8e-44
AZU21786.1|2784554_2784821_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 9
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	3011222	3074801	5312327	transposase,tRNA	Ralstonia_phage(28.57%)	47	NA	NA
AZU21956.1|3011222_3012203_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU21957.1|3012317_3012632_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21958.1|3012630_3013281_+	hypothetical protein	NA	K4PAZ9	Burkholderia_phage	52.0	8.0e-41
AZU21959.1|3013549_3014086_+	membrane protein	NA	A0A2I2L3Z7	Orpheovirus	33.1	9.0e-14
AZU21960.1|3014197_3014674_+	hypothetical protein	NA	NA	NA	NA	NA
AZU21961.1|3014712_3016506_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZU21962.1|3016758_3017415_+	HNH endonuclease	NA	F5B475	Synechococcus_phage	40.2	3.0e-11
AZU23731.1|3017848_3019765_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
AZU21963.1|3019800_3021057_-	glycosyl transferase	NA	NA	NA	NA	NA
AZU21964.1|3021046_3021658_-	hypothetical protein	NA	NA	NA	NA	NA
AZU21965.1|3021635_3022790_-	ceramide glucosyltransferase	NA	NA	NA	NA	NA
AZU21966.1|3022780_3023740_-	NAD(P)H steroid dehydrogenase	NA	NA	NA	NA	NA
AZU21967.1|3023736_3024585_-	lactamase	NA	NA	NA	NA	NA
AZU23732.1|3024584_3025652_-	3-oxoacyl-ACP synthase	NA	NA	NA	NA	NA
AZU21968.1|3026890_3027352_-	hypothetical protein	NA	A0A291AU44	Pandoravirus	41.5	1.8e-18
AZU21969.1|3027386_3028181_-	polysaccharide biosynthesis protein GumM	NA	NA	NA	NA	NA
AZU21970.1|3028185_3028980_-	polysaccharide biosynthesis protein GumL	NA	A0A1V0SAR6	Catovirus	36.5	7.0e-23
AZU21971.1|3029017_3030214_-	glycosyl transferase family 1	NA	NA	NA	NA	NA
AZU21972.1|3030277_3031768_-	polysaccharide biosynthesis protein GumJ	NA	NA	NA	NA	NA
AZU21973.1|3031785_3032835_-	GDP-mannose:glycolipid 4-beta-D-mannosyltransferase	NA	NA	NA	NA	NA
AZU21974.1|3032831_3033974_-	glycosyl transferase family 1	NA	NA	NA	NA	NA
AZU21975.1|3034041_3035130_-	polysaccharide biosynthesis protein GumF	NA	NA	NA	NA	NA
AZU21976.1|3035143_3036235_-	polysaccharide biosynthesis protein GumF	NA	NA	NA	NA	NA
AZU21977.1|3036231_3037533_-	polysaccharide biosynthesis protein GumE	NA	NA	NA	NA	NA
AZU21978.1|3037615_3039070_-	polysaccharide biosynthesis protein GumD	NA	NA	NA	NA	NA
AZU21979.1|3039312_3040731_-	polysaccharide biosynthesis protein GumC	NA	NA	NA	NA	NA
AZU21980.1|3040733_3041432_-	polysaccharide biosynthesis protein GumB	NA	NA	NA	NA	NA
AZU21981.1|3042040_3042397_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZU21982.1|3042377_3042677_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	38.9	4.7e-12
AZU21983.1|3042698_3045077_-|tRNA	phenylalanyl-tRNA synthetase	tRNA	NA	NA	NA	NA
AZU21984.1|3045191_3046187_-|tRNA	phenylalanyl-tRNA synthetase	tRNA	A0A2K9L3A8	Tupanvirus	35.6	3.0e-31
AZU21985.1|3046437_3046797_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AZU21986.1|3046807_3047005_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AZU21987.1|3047251_3047731_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	36.7	4.0e-13
AZU21988.1|3047842_3049747_-|tRNA	threonyl-tRNA synthetase	tRNA	A0A2K9L6B6	Tupanvirus	36.3	3.6e-126
AZU21989.1|3050068_3051190_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	26.7	2.2e-14
AZU21990.1|3051273_3052950_-	cyclomaltodextrin glucanotransferase	NA	NA	NA	NA	NA
AZU21991.1|3052946_3054425_-	MFS transporter	NA	NA	NA	NA	NA
AZU21992.1|3054421_3056608_-	Six-hairpin glycosidase-like protein	NA	NA	NA	NA	NA
AZU21993.1|3059244_3062019_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZU21994.1|3063489_3064473_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
AZU21995.1|3064652_3065633_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU21996.1|3066105_3067203_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU23733.1|3068433_3069069_+	carboxypeptidase	NA	NA	NA	NA	NA
AZU21997.1|3069405_3071022_+	alpha-glucosidase	NA	NA	NA	NA	NA
AZU21998.1|3073345_3073522_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	71.7	1.1e-13
AZU21999.1|3073703_3074801_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 10
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	3134263	3183642	5312327	transposase	Ralstonia_phage(60.0%)	36	NA	NA
AZU22026.1|3134263_3135361_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU22027.1|3136026_3136290_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22028.1|3136517_3137498_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU22029.1|3138332_3138611_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22030.1|3138607_3138787_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22031.1|3139674_3140655_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU22032.1|3141554_3142652_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU22033.1|3142947_3146445_+	O-antigen biosynthesis protein	NA	K7QL84	Escherichia_phage	26.0	2.9e-12
AZU22034.1|3147033_3147405_+	flagellar hook-basal body protein	NA	NA	NA	NA	NA
AZU22035.1|3147418_3149143_+	flagellar MS-ring protein	NA	NA	NA	NA	NA
AZU22036.1|3149153_3150143_+	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
AZU22037.1|3150139_3150760_+	flagellar assembly protein FliH	NA	NA	NA	NA	NA
AZU22038.1|3150756_3152133_+	flagellar protein FliI	NA	NA	NA	NA	NA
AZU22039.1|3152136_3152592_+	flagellar export protein FliJ	NA	NA	NA	NA	NA
AZU22040.1|3152588_3153881_+	flagellar protein	NA	NA	NA	NA	NA
AZU23738.1|3154069_3154597_+	flagellar basal body protein FliL	NA	NA	NA	NA	NA
AZU22041.1|3154607_3155621_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
AZU22042.1|3155617_3155956_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
AZU22043.1|3155952_3156360_+	flagellar protein	NA	NA	NA	NA	NA
AZU22044.1|3156361_3157207_+	flagellar biosynthesis protein flip	NA	NA	NA	NA	NA
AZU22045.1|3158080_3158350_+	flagellar biogenesis protein	NA	NA	NA	NA	NA
AZU22046.1|3158363_3159155_+	flagellar biosynthesis protein FliR	NA	NA	NA	NA	NA
AZU23739.1|3164991_3165588_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.0	7.1e-12
AZU22047.1|3168099_3169230_+	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
AZU22048.1|3169226_3171320_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA	NA
AZU22049.1|3172258_3173965_+	flagellar biosynthesis regulator FlhF	NA	NA	NA	NA	NA
AZU22050.1|3173951_3174836_+	cobyrinic acid a,c-diamide synthase	NA	NA	NA	NA	NA
AZU22051.1|3174832_3175600_+	flagellar biosynthesis sigma factor	NA	NA	NA	NA	NA
AZU22052.1|3175622_3176015_+	histidine kinase	NA	NA	NA	NA	NA
AZU22053.1|3176014_3176641_+	chemotaxis protein	NA	NA	NA	NA	NA
AZU22054.1|3176643_3178302_+	chemotaxis protein	NA	NA	NA	NA	NA
AZU22055.1|3178617_3179715_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU23740.1|3179928_3180144_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22056.1|3180161_3180485_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22057.1|3180683_3181445_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22058.1|3182661_3183642_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
>prophage 11
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	3257402	3331082	5312327	transposase,tRNA	uncultured_virus(25.0%)	60	NA	NA
AZU22100.1|3257402_3258920_-|tRNA	lysyl-tRNA synthetase	tRNA	A0A2K9KZX5	Tupanvirus	39.7	1.6e-84
AZU23743.1|3259130_3260039_-	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.7	7.6e-05
AZU22101.1|3260505_3261453_-	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
AZU22102.1|3261611_3262826_+	membrane protein	NA	NA	NA	NA	NA
AZU22103.1|3263151_3264891_-	ssDNA exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.4	1.2e-43
AZU22104.1|3264887_3265808_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
AZU22105.1|3265824_3266301_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
AZU22106.1|3266297_3269540_-	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA	NA
AZU22107.1|3269548_3269992_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22108.1|3269991_3271167_-	carbamoyl-phosphate synthase	NA	R4TGJ8	Halovirus	31.6	1.8e-43
AZU22109.1|3271406_3272123_-	dihydrodipicolinate reductase	NA	NA	NA	NA	NA
AZU22110.1|3272485_3273205_-	molybdenum cofactor sulfurase	NA	NA	NA	NA	NA
AZU23744.1|3273201_3274404_-	2-aminoadipate aminotransferase	NA	NA	NA	NA	NA
AZU22111.1|3274631_3275132_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22112.1|3275191_3275446_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22113.1|3275447_3277307_-	iron transporter FeoB	NA	NA	NA	NA	NA
AZU22114.1|3277303_3277552_-	iron transporter	NA	NA	NA	NA	NA
AZU22115.1|3277666_3278464_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZU22116.1|3278460_3278850_+	glyoxalase	NA	NA	NA	NA	NA
AZU22117.1|3278956_3279853_+	hydroxymethylglutaryl-CoA lyase	NA	A0A1V0SKU2	Klosneuvirus	33.3	1.7e-33
AZU22118.1|3279989_3280760_+	3-hydroxy-2-methylbutyryl-CoA dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.8	5.8e-14
AZU22119.1|3280880_3281447_+	elongation factor P	NA	NA	NA	NA	NA
AZU22120.1|3281446_3281833_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22121.1|3282064_3283921_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22122.1|3283917_3284217_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22123.1|3284251_3285670_-	FAD-linked oxidase	NA	NA	NA	NA	NA
AZU22124.1|3285878_3287120_+	3-phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	48.1	9.7e-104
AZU22125.1|3287584_3288157_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AZU22126.1|3288337_3289810_+	amino acid permease	NA	NA	NA	NA	NA
AZU22127.1|3289886_3291317_+	amino acid permease	NA	NA	NA	NA	NA
AZU22128.1|3291406_3292060_+	methylthioribulose-1-phosphate dehydratase	NA	NA	NA	NA	NA
AZU22129.1|3292095_3292662_+	acireductone dioxygenase	NA	NA	NA	NA	NA
AZU22130.1|3292664_3293363_+	haloacid dehalogenase	NA	NA	NA	NA	NA
AZU22131.1|3295059_3296646_-	calcineurin phosphoesterase	NA	NA	NA	NA	NA
AZU22132.1|3296814_3297435_-	phosphoribosyl-ATP pyrophosphatase	NA	NA	NA	NA	NA
AZU22133.1|3297424_3298201_-	imidazole glycerol phosphate synthase	NA	NA	NA	NA	NA
AZU22134.1|3298194_3298929_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	NA	NA	NA	NA	NA
AZU22135.1|3298925_3299528_-	imidazole glycerol phosphate synthase	NA	NA	NA	NA	NA
AZU22136.1|3299524_3300652_-	imidazoleglycerol-phosphate dehydratase	NA	NA	NA	NA	NA
AZU22137.1|3300648_3301740_-	histidinol-phosphate aminotransferase	NA	NA	NA	NA	NA
AZU22138.1|3301736_3303032_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
AZU22139.1|3303028_3303943_-	ATP phosphoribosyltransferase	NA	NA	NA	NA	NA
AZU22140.1|3303952_3304276_-	TrpR	NA	NA	NA	NA	NA
AZU22141.1|3304894_3306307_-|tRNA	histidyl-tRNA synthase	tRNA	A0A2K9L6G5	Tupanvirus	28.4	4.6e-41
AZU22142.1|3306414_3307176_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AZU22143.1|3307261_3308005_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23745.1|3308105_3309410_-	threonine synthase	NA	NA	NA	NA	NA
AZU22144.1|3309571_3309886_+	ethyl tert-butyl ether degradation protein EthD	NA	NA	NA	NA	NA
AZU23746.1|3309960_3310935_-	serine kinase	NA	NA	NA	NA	NA
AZU22145.1|3310976_3313484_-	aspartate kinase	NA	NA	NA	NA	NA
AZU22146.1|3314170_3314671_-	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
AZU22147.1|3314961_3315228_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU22148.1|3315442_3316669_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22149.1|3316659_3316950_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22150.1|3317094_3317514_-	hypothetical protein	NA	A0A077K814	Ralstonia_phage	58.3	2.2e-31
AZU22151.1|3317656_3318754_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU22152.1|3319919_3321146_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22153.1|3323368_3324466_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU22154.1|3328471_3328687_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22155.1|3329855_3331082_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
>prophage 12
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	3435290	3446058	5312327	tRNA	uncultured_Caudovirales_phage(16.67%)	7	NA	NA
AZU23755.1|3435290_3437249_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	42.0	1.6e-12
AZU22210.1|3438557_3438770_-	carbon storage regulator	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
AZU22211.1|3438909_3441558_-|tRNA	alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	40.0	1.7e-84
AZU22212.1|3441659_3442148_-	recombinase RecX	NA	NA	NA	NA	NA
AZU22213.1|3442445_3443480_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.3	5.1e-114
AZU22214.1|3443652_3444294_-	LexA family transcriptional regulator	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
AZU22215.1|3444381_3446058_-	ubiquinone biosynthesis protein UbiB	NA	G8DDN0	Micromonas_pusilla_virus	29.7	1.1e-41
>prophage 13
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	3866031	4022011	5312327	transposase,protease,integrase,tRNA	uncultured_virus(28.12%)	113	3931714:3931773	4020965:4022130
AZU22540.1|3866031_3867258_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22541.1|3867437_3867704_-	hypothetical protein	NA	A0A193GYU8	Escherichia_phage	55.7	3.5e-19
AZU22542.1|3867877_3868132_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22543.1|3868294_3868468_-	membrane protein	NA	NA	NA	NA	NA
AZU22544.1|3868746_3869376_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZU22545.1|3869889_3870990_+	leucine dehydrogenase	NA	NA	NA	NA	NA
AZU22546.1|3871051_3873892_-|protease	serine protease	protease	A0A1V0SBG2	Catovirus	24.3	3.9e-07
AZU22547.1|3874048_3875224_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZU22548.1|3875346_3875688_+	membrane protein	NA	NA	NA	NA	NA
AZU22549.1|3875916_3876243_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22550.1|3876350_3878060_+	histidine kinase	NA	A0A127AWB9	Bacillus_phage	37.5	9.5e-17
AZU22551.1|3878298_3878856_+	cell shape determination protein CcmA	NA	NA	NA	NA	NA
AZU22552.1|3878852_3879218_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22553.1|3879456_3880479_+	mRNA 3'-end processing factor	NA	NA	NA	NA	NA
AZU22554.1|3880475_3880709_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22555.1|3880705_3882310_+	ATP-dependent DNA ligase	NA	A0A2H4JD86	uncultured_Caudovirales_phage	29.0	2.4e-09
AZU22556.1|3882306_3884808_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZU22557.1|3884797_3885442_+	phosphoesterase	NA	NA	NA	NA	NA
AZU22558.1|3885469_3886741_-	oxidoreductase	NA	NA	NA	NA	NA
AZU22559.1|3886836_3887043_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	70.1	9.3e-20
AZU22560.1|3887130_3887883_-	5'-methylthioadenosine phosphorylase	NA	NA	NA	NA	NA
AZU22561.1|3887965_3888520_-	hypoxanthine-guanine phosphoribosyltransferase	NA	NA	NA	NA	NA
AZU22562.1|3888519_3889524_-	beta-hexosaminidase	NA	NA	NA	NA	NA
AZU22563.1|3889641_3891219_-	deoxyribodipyrimidine photolyase	NA	E3T4R9	Cafeteria_roenbergensis_virus	28.0	6.9e-46
AZU22564.1|3891399_3892434_-	NAD/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZU22565.1|3892450_3893134_-	polyketide synthase	NA	NA	NA	NA	NA
AZU22566.1|3893350_3893848_-	CYTH domain protein	NA	NA	NA	NA	NA
AZU22567.1|3894030_3895365_-	23S rRNA methyltransferase	NA	F5CA72	Streptococcus_phi-m46.1-like_phage	27.2	5.0e-29
AZU22568.1|3895524_3896247_+	transcriptional regulator	NA	NA	NA	NA	NA
AZU22569.1|3896644_3897367_-	DNA recombination protein RecO	NA	NA	NA	NA	NA
AZU22570.1|3897599_3898499_-	GTPase Era	NA	NA	NA	NA	NA
AZU22571.1|3898495_3899176_-	ribonuclease 3	NA	A0A2K9L8W0	Tupanvirus	29.5	1.7e-17
AZU22572.1|3899165_3899543_-	membrane protein	NA	NA	NA	NA	NA
AZU22573.1|3899573_3900374_-	signal peptidase	NA	NA	NA	NA	NA
AZU22574.1|3900471_3902262_-	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	41.2	1.2e-22
AZU22575.1|3902444_3904022_-	peptidase S1	NA	A0A1B1IT49	uncultured_Mediterranean_phage	29.9	1.6e-26
AZU22576.1|3904131_3905025_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22577.1|3905021_3905642_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
AZU22578.1|3905877_3907959_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZU22579.1|3908704_3909685_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU22580.1|3910042_3910336_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22581.1|3910437_3911772_-	histidine kinase	NA	NA	NA	NA	NA
AZU22582.1|3911764_3912442_-	XRE family transcriptional regulator	NA	Q6XM27	Feldmannia_irregularis_virus	27.4	7.4e-05
AZU23785.1|3912467_3912944_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23786.1|3913130_3914018_-	ribosomal protein S6 modification protein	NA	A0A1D7SR78	Cyanophage	32.4	2.7e-31
AZU22583.1|3914514_3916647_+	glycogen debranching protein	NA	NA	NA	NA	NA
AZU22584.1|3917190_3918174_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
AZU22585.1|3918445_3918838_-	histone-like nucleoid-structuring protein	NA	NA	NA	NA	NA
AZU22586.1|3918928_3919321_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22587.1|3919431_3920091_-	succinoglycan biosynthesis protein	NA	NA	NA	NA	NA
AZU22588.1|3922791_3924018_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22589.1|3924311_3928286_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22590.1|3928319_3928979_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22591.1|3929128_3930109_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU23787.1|3930390_3931032_-	hypothetical protein	NA	NA	NA	NA	NA
3931714:3931773	attL	CTAGGGAAGGTCTGATCAACTCACCACAGATGCGCGACACTACCGTCTCATGTAGAGGAC	NA	NA	NA	NA
AZU22592.1|3931779_3932760_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU22593.1|3932945_3933602_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22594.1|3934412_3935510_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU22595.1|3935639_3936620_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU22596.1|3936709_3937147_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22597.1|3937287_3937488_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22598.1|3937557_3938037_-	RadC family protein	NA	NA	NA	NA	NA
AZU22599.1|3938648_3939875_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22600.1|3941300_3942527_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22601.1|3942586_3945850_-	DNA helicase	NA	NA	NA	NA	NA
AZU22602.1|3945931_3947029_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU22603.1|3948333_3949881_+	histidine kinase	NA	NA	NA	NA	NA
AZU22604.1|3950917_3952015_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU22605.1|3952207_3952855_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22606.1|3952886_3954020_+	Type IV secretion system protein virB6	NA	NA	NA	NA	NA
AZU22607.1|3954936_3955467_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23788.1|3955532_3956123_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22608.1|3957225_3958452_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22609.1|3958777_3960004_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22610.1|3960214_3961312_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU22611.1|3961611_3962538_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22612.1|3962530_3963289_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23789.1|3963914_3965423_-	membrane protein	NA	NA	NA	NA	NA
AZU22613.1|3965699_3966926_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22614.1|3968838_3970065_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22615.1|3972784_3974011_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU22616.1|3974243_3975341_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU22617.1|3975654_3975873_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22618.1|3975863_3976157_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22619.1|3976445_3977543_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU22620.1|3979072_3980626_-|integrase	integrase	integrase	NA	NA	NA	NA
AZU22621.1|3980885_3982670_-	esterase	NA	NA	NA	NA	NA
AZU22622.1|3982858_3983059_+	thiamine biosynthesis protein ThiS	NA	NA	NA	NA	NA
AZU22623.1|3983108_3983903_+	thiazole synthase	NA	NA	NA	NA	NA
AZU22624.1|3984125_3984884_+|tRNA	tRNA (guanine-N7)-methyltransferase	tRNA	NA	NA	NA	NA
AZU22625.1|3984961_3986824_+	potassium transporter TrkA	NA	NA	NA	NA	NA
AZU22626.1|3986882_3987224_-	ferredoxin	NA	NA	NA	NA	NA
AZU22627.1|3987484_3987760_+	membrane protein	NA	NA	NA	NA	NA
AZU22628.1|3988223_3988937_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AZU22629.1|3988997_3989429_+	mechanosensitive ion channel protein MscL	NA	NA	NA	NA	NA
AZU22630.1|3989552_3990971_+	aminopeptidase	NA	NA	NA	NA	NA
AZU22631.1|3991235_3992288_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZU22632.1|3992657_3995594_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AZU22633.1|3995730_3999198_-	glycosyl hydrolase	NA	NA	NA	NA	NA
AZU22634.1|3999415_4001380_+	alpha-glucosidase	NA	NA	NA	NA	NA
AZU22635.1|4001517_4003023_-	carboxylesterase	NA	A0A0M4JT58	Mollivirus	32.3	1.4e-27
AZU22636.1|4003022_4003940_-	RNA methyltransferase	NA	NA	NA	NA	NA
AZU23790.1|4004230_4004800_-	acetyltransferase	NA	NA	NA	NA	NA
AZU22637.1|4004867_4007543_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	47.8	1.3e-238
AZU22638.1|4007889_4011015_-	multidrug transporter AcrB	NA	S5VTK5	Leptospira_phage	23.0	1.7e-75
AZU22639.1|4011011_4012082_-	RND transporter	NA	NA	NA	NA	NA
AZU22640.1|4012238_4013219_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU22641.1|4013504_4015481_-	adenylyltransferase	NA	A0A1V0SGC3	Hokovirus	28.9	1.8e-27
AZU22642.1|4015480_4016389_-	sulfate adenylyltransferase	NA	NA	NA	NA	NA
AZU22643.1|4016568_4018416_+	NADP oxidoreductase	NA	NA	NA	NA	NA
AZU22644.1|4018539_4020246_+	sulfite reductase	NA	NA	NA	NA	NA
AZU22645.1|4020242_4020968_+	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA	NA
AZU22646.1|4021030_4022011_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
4020965:4022130	attR	CTAGGGAAGGTCTGATCAACTCACCACAGATGCGCGACACTACCGTCTCATGTAGAGGACTCATCCATGCAGCTGACGTTCGGTGACGCTGAGGGCCTGGGCAAGCGTAAGCAGACCCGGCGCGAGATATTTCTGGCCGAGATGGAGCAGGTCGTTCCGTGGCAGCAACTGCTCGGGCTGATCGCGTTGCACTATCCTACGTCGGGGCGGCCAGGTCGGCAGCCGTACGCACTGGCGACGATGTTGCGGATTCATTTGCTGCAGCAATGGTATGCGTTGAGTGATCCGGCGATGGAAGAGGCATTGCACGAGATCCCGACCCTGCGGCGTTTTGCCCAGCTCGGCGGCTTGGACAACGTTCCAGACGAGACGACGATTCTCAACTTTCGCCGTCTGCTGGAAACCCACGGTATTGCCGCGCGGATGCTGGAAGCGGTCAACGCCCATTTGTCGCGCAAGGGTCAGAGCTTGCGGTCGGGCACGATCGTCGATGCGACGTTGATCGCTGCGCCCAGCTCAACCAAGAACGCCGATCGTGCGCGCGACCCTGAGATGCATCAGACCAAGAAAGGCAACCAGTGGTACTTCGGGATGAAGGCGCACATCGGGGTGGATGAGTTTTCCGGGCTGGTACACCACGTGCAGTGCACCGCAGCCAACGTGGCCGATGTCACGGTGACGCACGCATTGCTGCACGGGAAGGAAGGCAGCGTGTTCGGCGACAGCGGCTACACCGGTGCGGAAAAGCGCGACGAGCTACAGCGCTGCGAGGCTGCATTTTTCATTGCCGCCAAGCGCTCCACGATTCAGGCCATAGGCAACAAGCGCGAGCGTGCTGGGGCAGAACGTTGGGAACACTTCAAGGCCAGCGTGCGCGCAAAGGTGGAGCATCCATTCCGGGTGATCAAGCACCAGTTTGGCTACACCAAGGTCCGCTATCGCGGCTTGGCCAAGAACACCGCGCAGGTGCTGACGTTGTTTGCGCTGTCCAACCTGTGGATGAAGCGAAAGCAGTTACTGTCCGCTGCGGGGAGCGTGCGCCTGTGATCGGGAGATGATGTCCGGATCGCGCCGAAAATGGTGCAAATTCCGACTATTCAAACGCAGCTCCTTGGAGAAATGCACCTCCCGCGTCCTCAGCTCTCATTAATCAGACCATCCCTAGC	NA	NA	NA	NA
>prophage 14
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	4250498	4335096	5312327	transposase,protease,tRNA	Bacillus_phage(15.38%)	50	NA	NA
AZU22807.1|4250498_4251479_-|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.1e-97
AZU22808.1|4251942_4252887_+	DegV domain-containing protein	NA	NA	NA	NA	NA
AZU22809.1|4253104_4253599_-	peptide deformylase	NA	NA	NA	NA	NA
AZU22810.1|4253908_4254331_-	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	61.5	1.5e-40
AZU22811.1|4254677_4255103_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22812.1|4255095_4256754_+|protease	serine protease	protease	NA	NA	NA	NA
AZU22813.1|4256986_4261516_-	cellulose synthase	NA	NA	NA	NA	NA
AZU22814.1|4261497_4262670_-	1,4-D-glucanase	NA	NA	NA	NA	NA
AZU22815.1|4262666_4264988_-	cation tolerance protein CutA	NA	NA	NA	NA	NA
AZU22816.1|4265032_4267177_-	cellulose synthase	NA	NA	NA	NA	NA
AZU22817.1|4267259_4267736_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22818.1|4267764_4268220_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22819.1|4268421_4269600_-	nicotinate phosphoribosyltransferase	NA	A0A2L0UZQ6	Agrobacterium_phage	33.0	2.0e-50
AZU22820.1|4269988_4270957_-	glycosidase-like protein	NA	NA	NA	NA	NA
AZU22821.1|4270938_4272234_-	membrane protein	NA	NA	NA	NA	NA
AZU22822.1|4272283_4274188_-	glycosyltransferase	NA	NA	NA	NA	NA
AZU22823.1|4275362_4276202_-	glycosyl transferase	NA	NA	NA	NA	NA
AZU22824.1|4276209_4276509_-	hypothetical protein	NA	NA	NA	NA	NA
AZU22825.1|4280403_4280979_+	aminotransferase	NA	NA	NA	NA	NA
AZU22826.1|4281084_4281813_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZU22827.1|4281952_4283050_-|transposase	transposase	transposase	NA	NA	NA	NA
AZU22828.1|4283544_4284375_-	glycosyltransferase	NA	NA	NA	NA	NA
AZU22829.1|4284828_4287108_-	general secretion pathway protein GspD	NA	G4WZN6	Enterobacteria_phage	21.4	6.1e-11
AZU22830.1|4287104_4287896_-	general secretion pathway protein GspN	NA	NA	NA	NA	NA
AZU22831.1|4287885_4288539_-	general secretion pathway protein GspM	NA	NA	NA	NA	NA
AZU22832.1|4288522_4289644_-	general secretion pathway protein GspL	NA	NA	NA	NA	NA
AZU22833.1|4289640_4290492_-	general secretion pathway protein GspK	NA	NA	NA	NA	NA
AZU22834.1|4290488_4291124_-	general secretion pathway protein GspJ	NA	NA	NA	NA	NA
AZU22835.1|4291120_4291537_-	general secretion pathway protein GspI	NA	NA	NA	NA	NA
AZU22836.1|4291533_4292043_-	general secretion pathway protein GspH	NA	NA	NA	NA	NA
AZU22837.1|4292052_4292484_-	general secretion pathway protein GspG	NA	NA	NA	NA	NA
AZU22838.1|4292724_4293942_-	general secretion pathway protein GspF	NA	NA	NA	NA	NA
AZU22839.1|4294117_4295845_-	general secretion pathway protein GspE	NA	NA	NA	NA	NA
AZU23804.1|4295974_4297858_-|protease	protease	protease	A0A1B0T6A2	Bacillus_phage	33.2	1.0e-24
AZU22840.1|4305654_4307538_-|protease	protease	protease	A0A217EQY2	Bacillus_phage	32.0	7.3e-18
AZU22841.1|4307640_4310838_-	adhesin	NA	NA	NA	NA	NA
AZU22842.1|4311500_4315547_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	56.9	4.4e-121
AZU22843.1|4316046_4316844_-	chitinase	NA	NA	NA	NA	NA
AZU23805.1|4317324_4318296_-	recombinase XerD	NA	G1JX48	Mycobacterium_phage	26.8	8.6e-15
AZU22844.1|4318652_4319120_+	membrane protein	NA	NA	NA	NA	NA
AZU22845.1|4319199_4319529_-	membrane protein	NA	NA	NA	NA	NA
AZU23806.1|4319533_4320640_-	membrane protein	NA	NA	NA	NA	NA
AZU22846.1|4320636_4321719_-	membrane protein	NA	NA	NA	NA	NA
AZU22847.1|4321826_4323299_+	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	36.9	1.8e-48
AZU22848.1|4323298_4323661_+	membrane protein	NA	NA	NA	NA	NA
AZU22849.1|4323668_4324094_+	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
AZU22850.1|4324286_4327121_+|tRNA	valyl-tRNA synthetase	tRNA	A0A1V0S951	Catovirus	34.4	1.7e-132
AZU22851.1|4327663_4330543_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	23.8	2.4e-36
AZU22852.1|4330793_4332767_+	lytic murein transglycosylase	NA	A0A0H3V0Q1	Geobacillus_virus	36.7	2.7e-15
AZU22853.1|4333869_4335096_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
>prophage 15
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	4350716	4362478	5312327	coat	Enterobacteria_phage(37.5%)	11	NA	NA
AZU22869.1|4350716_4352063_+	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	27.1	7.5e-33
AZU22870.1|4352109_4353513_+	mannose-1-phosphate guanyltransferase	NA	A0A1V0SH58	Hokovirus	30.0	1.1e-47
AZU22871.1|4353787_4354954_-	UDP-glucose 6-dehydrogenase	NA	M1HZB2	Paramecium_bursaria_Chlorella_virus	58.6	2.5e-117
AZU22872.1|4355294_4356194_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.2	4.1e-27
AZU22873.1|4356190_4356748_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.9	6.6e-44
AZU22874.1|4356744_4357632_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	57.5	1.5e-93
AZU22875.1|4357683_4358739_-|coat	spore coat protein	coat	I7HTA3	Enterobacteria_phage	47.1	1.4e-82
AZU22876.1|4358958_4359705_+	EtfB protein	NA	NA	NA	NA	NA
AZU22877.1|4359704_4360649_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
AZU22878.1|4360812_4361541_+	hypothetical protein	NA	NA	NA	NA	NA
AZU22879.1|4361521_4362478_+	ribonuclease III	NA	A0A192Y8W7	Salmonella_phage	27.1	1.1e-25
>prophage 16
CP012055	Xanthomonas fuscans subsp. fuscans strain ISO12C3, complete genome	5312327	5184526	5239855	5312327	transposase,tail	uncultured_virus(30.0%)	36	NA	NA
AZU23479.1|5184526_5185753_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU23480.1|5186501_5187203_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23481.1|5187189_5188659_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23482.1|5188678_5189281_-	GTP cyclohydrolase	NA	E7DN69	Pneumococcus_phage	49.0	3.1e-47
AZU23483.1|5189411_5189864_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZU23484.1|5189961_5190171_+	membrane protein	NA	NA	NA	NA	NA
AZU23485.1|5190167_5191100_+	membrane protein	NA	NA	NA	NA	NA
AZU23486.1|5191096_5192557_+	RND transporter	NA	NA	NA	NA	NA
AZU23487.1|5192553_5194872_+	multidrug transporter	NA	NA	NA	NA	NA
AZU23488.1|5195122_5196484_-	DeoR family transcriptional regulator	NA	Q6JIH2	Burkholderia_virus	27.1	1.9e-31
AZU23489.1|5197236_5198139_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZU23490.1|5198239_5199073_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZU23491.1|5199896_5201162_+	cardiolipin synthetase	NA	NA	NA	NA	NA
AZU23492.1|5201185_5201713_-	membrane protein	NA	NA	NA	NA	NA
AZU23493.1|5201983_5202190_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23494.1|5202176_5203283_+	plasmid stabilization protein ParE	NA	NA	NA	NA	NA
AZU23495.1|5203513_5204740_-|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU23496.1|5205248_5206868_+	enterochelin esterase	NA	NA	NA	NA	NA
AZU23497.1|5206971_5207370_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23858.1|5208133_5208826_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23859.1|5208856_5209759_-	pseudouridylate synthase	NA	NA	NA	NA	NA
AZU23498.1|5210091_5211669_+	chlamydia polymorphic membrane family protein	NA	NA	NA	NA	NA
AZU23499.1|5213026_5214124_+|transposase	transposase	transposase	NA	NA	NA	NA
AZU23500.1|5214331_5214649_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23501.1|5214680_5215664_+|transposase	transposase	transposase	A0A077K814	Ralstonia_phage	59.9	8.2e-98
AZU23502.1|5216106_5216373_-	hypothetical protein	NA	NA	NA	NA	NA
AZU23503.1|5217506_5218733_+|transposase	transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.2e-52
AZU23504.1|5219005_5220931_+	aminopeptidase precursor	NA	NA	NA	NA	NA
AZU23505.1|5220998_5221178_+	hypothetical protein	NA	NA	NA	NA	NA
AZU23506.1|5221279_5222674_-	nucleoside hydrolase	NA	NA	NA	NA	NA
AZU23507.1|5223245_5225684_-	exodeoxyribonuclease V subunit alpha	NA	A0A0N9S864	Staphylococcus_phage	43.6	8.0e-09
AZU23508.1|5225886_5229909_-	exodeoxyribonuclease V subunit beta	NA	S5MMD7	Bacillus_phage	21.5	7.0e-10
AZU23860.1|5229905_5233310_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA	NA
AZU23509.1|5233659_5238447_-	hemagglutinin	NA	F5B3Z3	Synechococcus_phage	45.8	3.4e-19
AZU23510.1|5238707_5239259_+	microcystin-dependent protein	NA	NA	NA	NA	NA
AZU23511.1|5239327_5239855_+|tail	tail collar protein	tail	A0A0U4JYA4	Arthrobacter_phage	28.0	1.0e-09
