assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003999735.1_ASM399973v1	CP022572	Bacillus mesonae strain H20-5 chromosome, complete genome	1	207989-208170	1	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,RT,DinG	Orphan	CTTGAAGACAAAACAGCATAAAAAAT	26	0	0	NA	NA	NA	3	3	Orphan	cas3,WYL,csa3,DEDDh,RT,DinG	NA|77aa|up_0|CP022572.1_201727_201958_+,NA	NA|471aa|up_9|CP022572.1_192120_193533_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|96aa|up_8|CP022572.1_194371_194659_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|477aa|up_7|CP022572.1_195243_196674_+	PRK10654, dcuC, C4-dicarboxylate transporter DcuC; Provisional	NA|148aa|up_6|CP022572.1_196809_197253_+	pfam10730, DUF2521, Protein of unknown function (DUF2521)	NA|244aa|up_5|CP022572.1_197339_198071_+	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD	NA|351aa|up_4|CP022572.1_198222_199275_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|201aa|up_3|CP022572.1_199330_199933_-	pfam17898, GerD, Spore germination GerD central core domain	NA|228aa|up_2|CP022572.1_200095_200779_+	pfam14089, KbaA, KinB-signalling pathway activation in sporulation	NA|251aa|up_1|CP022572.1_200832_201585_-	cd10949, CE4_BsPdaB_like, Putative catalytic NodB homology domain of Bacillus subtilis putative polysaccharide deacetylase PdaB, and its bacterial homologs	NA|77aa|up_0|CP022572.1_201727_201958_+	NA	NA|100aa|down_0|CP022572.1_208425_208725_+	pfam11772, EpuA, DNA-directed RNA polymerase subunit beta	NA|145aa|down_1|CP022572.1_208815_209250_+	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|91aa|down_2|CP022572.1_209858_210131_+	pfam12116, SpoIIID, Stage III sporulation protein D	NA|334aa|down_3|CP022572.1_210326_211328_+	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional	NA|301aa|down_4|CP022572.1_211495_212398_+	cd09989, Arginase, Arginase family	NA|188aa|down_5|CP022572.1_212630_213194_+	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional	NA|208aa|down_6|CP022572.1_213208_213832_+	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|274aa|down_7|CP022572.1_213965_214787_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|417aa|down_8|CP022572.1_214786_216037_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|450aa|down_9|CP022572.1_216071_217421_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional
GCA_003999735.1_ASM399973v1	CP022572	Bacillus mesonae strain H20-5 chromosome, complete genome	2	443004-443557	1	CRT	no		cas3,WYL,csa3,DEDDh,RT,DinG	Orphan	GTTTTGGTCTTCATCGNNCTTATGAAGACCATTT	34	4	4	443194-443211|443350-443367|443402-443419|443454-443471	CP022572.1_443558-443575|CP022572.1_443558-443575|CP022572.1_442986-443003|CP022572.1_442986-443003	NA	10	10	Orphan	cas3,WYL,csa3,DEDDh,RT,DinG	NA,NA	NA|132aa|up_9|CP022572.1_430335_430731_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|468aa|up_8|CP022572.1_430836_432240_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|453aa|up_7|CP022572.1_432348_433707_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|323aa|up_6|CP022572.1_434083_435052_+	PRK10162, PRK10162, acetyl esterase	NA|362aa|up_5|CP022572.1_435494_436580_+	cd08886, RHO_alpha_C_2, C-terminal catalytic domain of the oxygenase alpha subunit of an uncharacterized subgroup of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases	NA|483aa|up_4|CP022572.1_436576_438025_+	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1	NA|363aa|up_3|CP022572.1_438027_439116_+	PRK08194, PRK08194, tartrate dehydrogenase; Provisional	NA|516aa|up_2|CP022572.1_439278_440826_+	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter	NA|63aa|up_1|CP022572.1_440995_441184_+	pfam11755, DUF3311, Protein of unknown function (DUF3311)	NA|493aa|up_0|CP022572.1_441180_442659_+	COG0591, PutP, Na+/proline symporter [Amino acid transport and metabolism / General function prediction only]	NA|319aa|down_0|CP022572.1_443903_444860_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|406aa|down_1|CP022572.1_444862_446080_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|732aa|down_2|CP022572.1_446076_448272_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|507aa|down_3|CP022572.1_448561_450082_+	PRK00074, guaA, GMP synthase; Reviewed	NA|389aa|down_4|CP022572.1_450549_451716_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|443aa|down_5|CP022572.1_452862_454191_+	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|315aa|down_6|CP022572.1_454325_455270_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|389aa|down_7|CP022572.1_455286_456453_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|376aa|down_8|CP022572.1_456445_457573_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|281aa|down_9|CP022572.1_457667_458510_+	COG3711, BglG, Transcriptional antiterminator [Transcription]
GCA_003999735.1_ASM399973v1	CP022572	Bacillus mesonae strain H20-5 chromosome, complete genome	3	1231611-1231686	2	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,RT,DinG	Orphan	AAACCTAGAAAAAGAGTAAAAAAG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,RT,DinG	NA,NA|96aa|down_1|CP022572.1_1232419_1232707_+	NA|369aa|up_9|CP022572.1_1215797_1216904_-	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional	NA|514aa|up_8|CP022572.1_1217017_1218559_-	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated	NA|344aa|up_7|CP022572.1_1218545_1219577_-	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|174aa|up_6|CP022572.1_1219747_1220269_-	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|576aa|up_5|CP022572.1_1220265_1221993_-	PRK07710, PRK07710, acetolactate synthase large subunit	NA|556aa|up_4|CP022572.1_1222695_1224363_-	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional	NA|272aa|up_3|CP022572.1_1225617_1226433_+	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold	NA|219aa|up_2|CP022572.1_1226587_1227244_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|241aa|up_1|CP022572.1_1227240_1227963_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|918aa|up_0|CP022572.1_1228179_1230933_+	pfam00350, Dynamin_N, Dynamin family	NA|156aa|down_0|CP022572.1_1231932_1232400_+	pfam03682, UPF0158, Uncharacterized protein family (UPF0158)	NA|96aa|down_1|CP022572.1_1232419_1232707_+	NA	NA|407aa|down_2|CP022572.1_1232788_1234009_+	pfam01139, RtcB, tRNA-splicing ligase RtcB	NA|186aa|down_3|CP022572.1_1234059_1234617_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|321aa|down_4|CP022572.1_1234674_1235637_-	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase	NA|406aa|down_5|CP022572.1_1235793_1237011_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|382aa|down_6|CP022572.1_1237225_1238371_+	cd01160, LCAD, Long chain acyl-CoA dehydrogenase	NA|385aa|down_7|CP022572.1_1238389_1239544_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|522aa|down_8|CP022572.1_1239719_1241285_+	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated	NA|220aa|down_9|CP022572.1_1241339_1241999_-	cd16423, HAD_BPGM-like, uncharacterized subfamily of beta-phosphoglucomutase-like family, similar to uncharacterized Bacillus subtilis YhcW
GCA_003999735.1_ASM399973v1	CP022572	Bacillus mesonae strain H20-5 chromosome, complete genome	4	1384434-1384508	3	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,RT,DinG	Orphan	TTCATGAGGACAAAAAGCGTTGG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,RT,DinG	NA|187aa|up_5|CP022572.1_1377899_1378460_+,NA|246aa|up_3|CP022572.1_1379320_1380058_+,NA	NA|519aa|up_9|CP022572.1_1372969_1374526_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|154aa|up_8|CP022572.1_1375033_1375495_+	cd13913, ba3_CcO_II_C, C-terminal cupredoxin domain of Ba3-like heme-copper oxidase subunit II	NA|560aa|up_7|CP022572.1_1375509_1377189_+	cd01660, ba3-like_Oxidase_I, ba3-like heme-copper oxidase subunit I	NA|212aa|up_6|CP022572.1_1377264_1377900_+	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|187aa|up_5|CP022572.1_1377899_1378460_+	NA	NA|235aa|up_4|CP022572.1_1378613_1379318_+	pfam10060, DUF2298, Uncharacterized membrane protein (DUF2298)	NA|246aa|up_3|CP022572.1_1379320_1380058_+	NA	NA|410aa|up_2|CP022572.1_1380083_1381313_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|433aa|up_1|CP022572.1_1381446_1382745_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|516aa|up_0|CP022572.1_1382814_1384362_+	cd01171, YXKO-related, B	NA|417aa|down_0|CP022572.1_1384651_1385902_+	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily	NA|271aa|down_1|CP022572.1_1386063_1386876_+	cd11593, Agmatinase-like_2, Agmatinase and related proteins	NA|305aa|down_2|CP022572.1_1386901_1387816_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|499aa|down_3|CP022572.1_1387927_1389424_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|121aa|down_4|CP022572.1_1389670_1390033_-	pfam07681, DoxX, DoxX	NA|254aa|down_5|CP022572.1_1390199_1390961_+	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|338aa|down_6|CP022572.1_1391194_1392208_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|323aa|down_7|CP022572.1_1392188_1393157_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|540aa|down_8|CP022572.1_1393209_1394829_+	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|336aa|down_9|CP022572.1_1395007_1396015_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCA_003999735.1_ASM399973v1	CP022572	Bacillus mesonae strain H20-5 chromosome, complete genome	7	5634191-5634306	6	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,RT,DinG	Orphan	CCTATCCGACAGTTGCAGCTCCCTTTACGACAAT	34	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,RT,DinG	NA,NA|68aa|down_2|CP022572.1_5638085_5638289_+	NA|124aa|up_9|CP022572.1_5620260_5620632_-	cd17553, REC_Spo0F-like, phosphoacceptor receiver (REC) domain of Spo0F and similar domains	NA|175aa|up_8|CP022572.1_5620893_5621418_+	pfam10740, DUF2529, Domain of unknown function (DUF2529)	NA|532aa|up_7|CP022572.1_5621637_5623233_-	PRK05380, pyrG, CTP synthetase; Validated	NA|190aa|up_6|CP022572.1_5623522_5624092_-	TIGR04567, DNA-directed_RNA_polymerase_subunit_delta, DNA-directed RNA polymerase delta subunit	NA|1084aa|up_5|CP022572.1_5624532_5627784_-	cd03678, MM_CoA_mutase_1, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, unknown subfamily 1; composed of uncharacterized bacterial proteins containing a C-terminal MCM domain	NA|216aa|up_4|CP022572.1_5627780_5628428_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|380aa|up_3|CP022572.1_5628646_5629786_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|377aa|up_2|CP022572.1_5630050_5631181_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|284aa|up_1|CP022572.1_5631721_5632573_-	PRK05808, PRK05808, 3-hydroxybutyryl-CoA dehydrogenase; Validated	NA|396aa|up_0|CP022572.1_5632724_5633912_-	PRK08235, PRK08235, acetyl-CoA C-acetyltransferase	NA|704aa|down_0|CP022572.1_5634380_5636492_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|420aa|down_1|CP022572.1_5636804_5638064_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|68aa|down_2|CP022572.1_5638085_5638289_+	NA	NA|60aa|down_3|CP022572.1_5638274_5638454_-	pfam08141, SspH, Small acid-soluble spore protein H family	NA|124aa|down_4|CP022572.1_5638516_5638888_-	pfam09148, DUF1934, Domain of unknown function (DUF1934)	NA|291aa|down_5|CP022572.1_5639138_5640011_-	TIGR01230, Agmatinase_Agmatine_ureohydrolase_AUH	NA|277aa|down_6|CP022572.1_5640669_5641500_-	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|691aa|down_7|CP022572.1_5641821_5643894_+	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|170aa|down_8|CP022572.1_5644109_5644619_-	pfam08741, YwhD, YwhD family	NA|218aa|down_9|CP022572.1_5644637_5645291_-	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms
