assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003999795.1_ASM399979v1	CP034738	Escherichia coli strain L65 chromosome, complete genome	1	1289070-1289216	1	CRISPRCasFinder	no		cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CGGATAAGGCGTTTACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTG	51	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|374aa|up_9|CP034738.1_1277719_1278841_-	pfam14897, EpsG, EpsG family	NA|185aa|up_8|CP034738.1_1278904_1279459_-	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|293aa|up_7|CP034738.1_1279463_1280342_-	PRK15480, PRK15480, glucose-1-phosphate thymidylyltransferase RfbA; Provisional	NA|300aa|up_6|CP034738.1_1280399_1281299_-	PRK09987, PRK09987, dTDP-4-dehydrorhamnose reductase; Provisional	NA|362aa|up_5|CP034738.1_1281298_1282384_-	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional	NA|298aa|up_4|CP034738.1_1282755_1283649_-	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF	NA|332aa|up_3|CP034738.1_1283891_1284887_-	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs	NA|465aa|up_2|CP034738.1_1285044_1286439_-	PRK10123, wcaM, putative colanic acid biosynthesis protein; Provisional	NA|407aa|up_1|CP034738.1_1286449_1287670_-	TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL	NA|427aa|up_0|CP034738.1_1287666_1288947_-	TIGR04006, wcaK, colanic acid biosynthesis pyruvyl transferase WcaK	NA|493aa|down_0|CP034738.1_1289318_1290797_-	PRK10459, PRK10459, MOP flippase family protein	NA|465aa|down_1|CP034738.1_1290798_1292193_-	PRK10124, PRK10124, putative UDP-glucose lipid carrier transferase; Provisional	NA|457aa|down_2|CP034738.1_1292247_1293618_-	PRK15414, PRK15414, phosphomannomutase	NA|479aa|down_3|CP034738.1_1293810_1295247_-	PRK15460, cpsB, mannose-1-phosphate guanyltransferase; Provisional	NA|408aa|down_4|CP034738.1_1295249_1296473_-	TIGR04007, wcaI, colanic acid biosynthesis glycosyl transferase WcaI	NA|160aa|down_5|CP034738.1_1296469_1296949_-	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase	NA|322aa|down_6|CP034738.1_1296951_1297917_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|374aa|down_7|CP034738.1_1297919_1299041_-	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|183aa|down_8|CP034738.1_1299067_1299616_-	TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF	NA|249aa|down_9|CP034738.1_1299631_1300378_-	PRK10063, PRK10063, colanic acid biosynthesis glycosyltransferase WcaE
GCA_003999795.1_ASM399979v1	CP034738	Escherichia coli strain L65 chromosome, complete genome	2	2061511-2062028	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACNC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,8,7	8	TypeI-E	cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|254aa|up_9|CP034738.1_2053384_2054146_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|CP034738.1_2054126_2055176_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|CP034738.1_2055172_2055652_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|CP034738.1_2055651_2056362_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|CP034738.1_2056380_2056692_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|CP034738.1_2056885_2057209_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|CP034738.1_2057258_2057864_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|CP034738.1_2057863_2059291_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|CP034738.1_2059292_2060201_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|CP034738.1_2060452_2061490_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|CP034738.1_2062124_2062418_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|CP034738.1_2062414_2063338_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|CP034738.1_2063334_2063985_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|CP034738.1_2063966_2064713_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|CP034738.1_2064723_2065779_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|CP034738.1_2065790_2066327_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_6|CP034738.1_2066323_2067886_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|CP034738.1_2067983_2070683_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|CP034738.1_2070877_2071030_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|CP034738.1_2071294_2072029_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCA_003999795.1_ASM399979v1	CP034738	Escherichia coli strain L65 chromosome, complete genome	3	2087729-2089221	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	24,24,24	24	Unclear	cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|47aa|down_1|CP034738.1_2090370_2090511_+	NA|424aa|up_9|CP034738.1_2076372_2077644_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|CP034738.1_2077634_2077895_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|CP034738.1_2077911_2078487_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|CP034738.1_2078634_2079495_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|CP034738.1_2079491_2080271_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|CP034738.1_2080248_2081586_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|CP034738.1_2081679_2083134_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|CP034738.1_2083203_2083989_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|CP034738.1_2084307_2085585_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|CP034738.1_2085611_2087090_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|CP034738.1_2089560_2090232_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|CP034738.1_2090370_2090511_+	NA	NA|433aa|down_2|CP034738.1_2091456_2092755_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|CP034738.1_2092842_2094480_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|CP034738.1_2094707_2095499_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|CP034738.1_2095569_2095905_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|CP034738.1_2095904_2096153_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|CP034738.1_2096230_2098465_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|CP034738.1_2098512_2099814_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|CP034738.1_2099870_2102627_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
