The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
AP019372	Staphylococcus pseudintermedius SP79 DNA, complete genome	2509706	1015684	1037082	2509706		Staphylococcus_phage(95.0%)	24	NA	NA
BBH73720.1|1015684_1017088_+	2-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	52.1	5.4e-135
BBH73721.1|1017090_1018077_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	47.6	7.3e-78
BBH73722.1|1018052_1018304_-	putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	70.6	4.6e-29
BBH73723.1|1018362_1018833_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	53.8	7.1e-39
BBH73724.1|1018813_1019590_+	dipeptidyl aminopeptidase	NA	A0A2H4PQM6	Staphylococcus_phage	61.6	2.4e-84
BBH73725.1|1019987_1021568_-	phosphoenolpyruvate carboxykinase [ATP]	NA	A0A2H4PQN1	Staphylococcus_phage	76.2	5.7e-242
BBH73726.1|1022031_1023231_+	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	80.3	1.8e-179
BBH73727.1|1023318_1024230_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	68.3	9.4e-88
BBH73728.1|1024371_1025208_+	glyoxal reductase	NA	A0A2H4PQR8	Staphylococcus_phage	69.7	1.0e-112
BBH73729.1|1025309_1025657_-	putative fluoride ion transporter CrcB 2	NA	NA	NA	NA	NA
BBH73730.1|1025653_1025890_-	hypothetical protein	NA	A0A2H4PQR0	Staphylococcus_phage	49.3	3.7e-12
BBH73731.1|1026051_1026354_-	hypothetical protein	NA	NA	NA	NA	NA
BBH73732.1|1026506_1027217_+	transaldolase	NA	M1PR54	Cyanophage	39.0	1.5e-21
BBH73733.1|1027383_1027833_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	36.7	1.0e-10
BBH73734.1|1027835_1028267_-	hypothetical protein	NA	NA	NA	NA	NA
BBH73735.1|1028269_1028824_-	RNA polymerase sigma factor sigS	NA	A0A2H4PQT5	Staphylococcus_phage	34.4	3.0e-20
BBH73736.1|1028955_1029180_+	hypothetical protein	NA	NA	NA	NA	NA
BBH73737.1|1029336_1030200_+	autolysin	NA	A0A1W6JQU5	Staphylococcus_phage	41.7	4.2e-37
BBH73738.1|1030588_1032157_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	60.3	2.0e-13
BBH73739.1|1032613_1033660_+	riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	54.7	1.4e-106
BBH73740.1|1033664_1034294_+	riboflavin synthase subunit alpha	NA	A0A2H4PQS5	Staphylococcus_phage	59.5	7.2e-63
BBH73741.1|1034307_1035489_+	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	66.2	8.3e-153
BBH73742.1|1035506_1035971_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	65.6	3.2e-52
BBH73743.1|1036095_1037082_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	67.0	2.8e-122
>prophage 2
AP019372	Staphylococcus pseudintermedius SP79 DNA, complete genome	2509706	1041199	1048991	2509706	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
BBH73748.1|1041199_1041763_-	rRNA methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	56.8	1.5e-56
BBH73749.1|1041759_1042713_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	80.4	6.4e-63
BBH73750.1|1042860_1044042_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	62.2	2.2e-137
BBH73751.1|1044332_1046765_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	81.8	0.0e+00
BBH73752.1|1046791_1047103_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	69.9	1.7e-33
BBH73753.1|1047734_1048991_-	NAD(FAD)-utilizing dehydrogenase	NA	A0A2H4PQX1	Staphylococcus_phage	69.5	1.3e-31
>prophage 3
AP019372	Staphylococcus pseudintermedius SP79 DNA, complete genome	2509706	1170174	1186288	2509706	tRNA	uncultured_Mediterranean_phage(40.0%)	12	NA	NA
BBH73865.1|1170174_1171173_+	Holliday junction ATP-dependent DNA helicase RuvB	NA	E3T4M7	Cafeteria_roenbergensis_virus	29.1	8.0e-08
BBH73866.1|1171190_1172216_+|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
BBH73867.1|1172233_1173373_+|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.5	1.2e-87
BBH73868.1|1173389_1173653_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.9	2.0e-06
BBH73869.1|1173794_1176074_+	bifunctional preprotein translocase subunit SecD/SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	32.0	7.2e-28
BBH73870.1|1176190_1178476_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	2.9e-69
BBH73871.1|1178487_1179006_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	48.0	8.9e-27
BBH73872.1|1179362_1181552_+	GTP pyrophosphokinase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	35.8	5.0e-10
BBH73873.1|1181564_1182017_+|tRNA	D-aminoacyl-tRNA deacylase	tRNA	NA	NA	NA	NA
BBH73874.1|1182013_1182889_+	putative cell wall amidase LytH	NA	A0A0N9SGH1	Paenibacillus_phage	28.3	7.0e-08
BBH73875.1|1183250_1184522_+|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L0H9	Tupanvirus	24.3	4.6e-16
BBH73876.1|1184521_1186288_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SFI4	Hokovirus	34.1	6.0e-06
>prophage 4
AP019372	Staphylococcus pseudintermedius SP79 DNA, complete genome	2509706	1311582	1323919	2509706		uncultured_Mediterranean_phage(25.0%)	14	NA	NA
BBH74010.1|1311582_1312503_-	oxidoreductase	NA	A0A1V0SKP9	Klosneuvirus	34.1	3.4e-05
BBH74011.1|1312582_1313125_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA	NA
BBH74012.1|1313229_1313685_+	transcriptional repressor	NA	NA	NA	NA	NA
BBH74013.1|1313724_1314612_+	tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.2	3.0e-38
BBH74014.1|1314898_1315405_-	hypothetical protein	NA	NA	NA	NA	NA
BBH74015.1|1315499_1316228_+	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	32.7	2.2e-10
BBH74016.1|1316217_1316760_+	segregation and condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	42.9	7.4e-08
BBH74017.1|1316760_1317507_+	pseudouridine synthase	NA	NA	NA	NA	NA
BBH74018.1|1317618_1318341_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	41.4	5.4e-46
BBH74019.1|1318327_1320085_+	sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	22.1	6.3e-16
BBH74020.1|1320444_1320990_+	riboflavin transporter	NA	NA	NA	NA	NA
BBH74021.1|1321252_1321501_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	53.3	2.3e-17
BBH74022.1|1321602_1322550_+	hypothetical protein	NA	NA	NA	NA	NA
BBH74023.1|1322542_1323919_+	ATP-dependent DNA helicase RecQ	NA	J2YAJ8	Acanthamoeba_polyphaga_lentillevirus	34.6	4.6e-54
>prophage 5
AP019372	Staphylococcus pseudintermedius SP79 DNA, complete genome	2509706	1745982	1754402	2509706		Synechococcus_phage(33.33%)	9	NA	NA
BBH74421.1|1745982_1746549_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.5	2.3e-28
BBH74422.1|1746548_1747580_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	42.7	9.0e-63
BBH74423.1|1747583_1749005_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.4	3.2e-50
BBH74424.1|1748983_1751173_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.3	1.6e-138
BBH74425.1|1751165_1751837_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
BBH74426.1|1751838_1752099_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
BBH74427.1|1752101_1752803_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.2	1.0e-49
BBH74428.1|1752799_1753933_-	N5-carboxyaminoimidazole ribonucleotide synthase	NA	NA	NA	NA	NA
BBH74429.1|1753919_1754402_-	N5-carboxyaminoimidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.9	3.1e-21
>prophage 6
AP019372	Staphylococcus pseudintermedius SP79 DNA, complete genome	2509706	1813111	1828371	2509706	transposase	Streptococcus_phage(73.33%)	16	NA	NA
BBH74480.1|1813111_1813699_-	hypothetical protein	NA	A0A0U4J920	Pseudomonas_phage	29.4	1.0e-10
BBH74481.1|1814327_1815932_+|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
BBH74482.1|1816652_1817312_-	hypothetical protein	NA	A0A1B0RXM8	Streptococcus_phage	100.0	3.1e-125
BBH74483.1|1817422_1817779_-	hypothetical protein	NA	A0A1B0RXM3	Streptococcus_phage	99.2	4.2e-60
BBH74484.1|1817802_1818375_-	transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
BBH74485.1|1818650_1819445_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
BBH74486.1|1819537_1820080_-	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
BBH74487.1|1820076_1820985_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
BBH74488.1|1821017_1821752_-	methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
BBH74489.1|1821732_1822602_-	hypothetical protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
BBH74490.1|1822704_1822950_-	hypothetical protein	NA	NA	NA	NA	NA
BBH74491.1|1822976_1823651_-|transposase	transposase	transposase	A0A146ICT8	Staphylococcus_phage	41.0	7.7e-47
BBH74492.1|1824240_1824978_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.2	7.0e-134
BBH74493.1|1825206_1825470_-	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	83.1	4.4e-22
BBH74494.1|1825609_1827754_-	DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	98.6	1.3e-268
BBH74495.1|1827753_1828371_-	resolvase	NA	A0A1V0E035	Clostridioides_phage	33.5	2.9e-16
>prophage 7
AP019372	Staphylococcus pseudintermedius SP79 DNA, complete genome	2509706	1997844	2004592	2509706	protease	Streptococcus_phage(33.33%)	7	NA	NA
BBH74654.1|1997844_1998342_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	31.7	5.2e-16
BBH74655.1|1998438_1999026_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	54.7	1.4e-52
BBH74656.1|1999920_2000067_-	hypothetical protein	NA	NA	NA	NA	NA
BBH74657.1|2000157_2001102_-	putative sporulation transcription regulator WhiA	NA	Q7AWZ3	Streptococcus_phage	39.6	3.5e-53
BBH74658.1|2001148_2002144_-	gluconeogenesis factor	NA	A1IMD5	Streptococcus_phage	43.0	5.3e-52
BBH74659.1|2002145_2003054_-	nucleotide-binding protein	NA	A0A0R8VB27	Thermobifida_phage	33.6	7.3e-08
BBH74660.1|2003659_2004592_-	thioredoxin reductase	NA	G3MA85	Bacillus_virus	49.5	3.2e-83
>prophage 8
AP019372	Staphylococcus pseudintermedius SP79 DNA, complete genome	2509706	2057329	2068151	2509706		Streptococcus_phage(14.29%)	13	NA	NA
BBH74706.1|2057329_2059267_-	lipoteichoic acid synthase	NA	W6LM83	Streptococcus_phage	37.5	7.3e-106
BBH74707.1|2059611_2060616_-	allophanate hydrolase	NA	NA	NA	NA	NA
BBH74708.1|2060612_2061296_-	allophanate hydrolase	NA	NA	NA	NA	NA
BBH74709.1|2061306_2061516_-	hypothetical protein	NA	NA	NA	NA	NA
BBH74710.1|2061524_2062139_-	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
BBH74711.1|2062135_2063284_-	para-aminobenzoate synthetase subunit I	NA	A0A0B5J984	Pandoravirus	44.8	5.6e-29
BBH74712.1|2063267_2063861_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	41.4	3.5e-35
BBH74713.1|2064121_2064790_+	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.1	2.0e-63
BBH74714.1|2064789_2065221_+	6-carboxy-5,6,7,8-tetrahydropterin synthase	NA	A0A2H4GYB3	Pseudomonas_phage	30.7	8.0e-05
BBH74715.1|2065213_2065927_+	7-carboxy-7-deazaguanine synthase	NA	A0A1U9WRB6	Streptococcus_virus	41.8	2.7e-50
BBH74716.1|2066074_2066674_+	hypothetical protein	NA	NA	NA	NA	NA
BBH74717.1|2066743_2066998_+	membrane protein	NA	NA	NA	NA	NA
BBH74718.1|2067170_2068151_-	glycosyl transferase	NA	A0A192Y8W7	Salmonella_phage	42.4	2.4e-65
