The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP021250	Bordetella sp. J329 chromosome, complete genome	3925525	1644849	1653546	3925525	protease	uncultured_Mediterranean_phage(28.57%)	8	NA	NA
AZV93525.1|1644849_1646433_+	exodeoxyribonuclease VII large subunit	NA	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	35.7	5.0e-28
AZV93526.1|1646744_1647224_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	39.4	2.2e-11
AZV93527.1|1647578_1647824_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	71.9	4.2e-19
AZV93528.1|1648126_1648462_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	46.2	5.8e-11
AZV93529.1|1648561_1650889_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	40.6	7.5e-158
AZV93530.1|1650993_1651443_-	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	Q2NP83	Xanthomonas_phage	59.3	9.1e-44
AZV93531.1|1651545_1652259_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93532.1|1652334_1653546_-	phosphopantothenate synthase	NA	Q9HH70	Methanothermobacter_phage	31.9	6.1e-42
>prophage 2
CP021250	Bordetella sp. J329 chromosome, complete genome	3925525	1675222	1715534	3925525	head,terminase	Pseudomonas_phage(50.0%)	56	NA	NA
AZV93547.1|1675222_1676971_-	DNA (cytosine-5-)-methyltransferase	NA	H9C171	Pectobacterium_phage	42.4	5.5e-137
AZV93548.1|1677082_1677376_-	RNA-binding protein	NA	A4PE68	Ralstonia_virus	67.4	5.4e-29
AZV93549.1|1677368_1677623_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93550.1|1677612_1678131_-	hypothetical protein	NA	A0A0S2SY48	Pseudomonas_phage	37.2	8.4e-09
AZV93551.1|1678123_1678540_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93552.1|1678536_1678884_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93553.1|1678880_1679318_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93554.1|1679352_1679592_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93555.1|1679584_1680487_-	recombination-associated protein RdgC	NA	A0A218M310	Acidovorax_phage	37.0	1.1e-48
AZV93556.1|1680924_1681392_-	single-stranded DNA-binding protein	NA	A0A088FAZ2	Sulfitobacter_phage	42.5	2.1e-11
AZV93557.1|1681394_1682033_-	exonuclease	NA	A0A2I7RQG4	Vibrio_phage	33.5	4.9e-19
AZV93558.1|1682034_1682775_-	single-stranded DNA-binding protein	NA	B5WZW4	Pseudomonas_phage	77.5	9.6e-75
AZV93559.1|1682783_1683677_-	hypothetical protein	NA	Q9MC69	Pseudomonas_phage	36.7	2.7e-23
AZV93560.1|1683673_1684213_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93561.1|1684602_1684992_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93562.1|1685107_1685398_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93563.1|1685772_1686453_+	hypothetical protein	NA	A0A088CBI8	Shigella_phage	35.5	7.6e-26
AZV93564.1|1686854_1687448_+	hypothetical protein	NA	NA	NA	NA	NA
AZV93565.1|1687600_1687942_+	hypothetical protein	NA	NA	NA	NA	NA
AZV93566.1|1688015_1688984_-	hypothetical protein	NA	Q8LTB7	Lactobacillus_phage	31.2	1.4e-33
AZV93567.1|1689159_1689522_-	hypothetical protein	NA	H2BD79	Pseudomonas_phage	45.5	2.8e-19
AZV95465.1|1689518_1690202_-	hypothetical protein	NA	Q94MM0	Bordetella_phage	59.1	7.5e-74
AZV93568.1|1690231_1690483_+	hypothetical protein	NA	NA	NA	NA	NA
AZV93569.1|1690475_1690733_+	hypothetical protein	NA	NA	NA	NA	NA
AZV93570.1|1690870_1691242_-	hypothetical protein	NA	NA	NA	NA	NA
AZV95466.1|1691496_1691808_+	transcriptional regulator	NA	NA	NA	NA	NA
AZV93571.1|1691809_1692235_+	hypothetical protein	NA	A0A2H4J106	uncultured_Caudovirales_phage	35.2	4.9e-15
AZV95467.1|1692276_1692735_+	hypothetical protein	NA	A0A0M3ULJ7	Salmonella_phage	46.5	1.5e-06
AZV93572.1|1692780_1693593_+	hypothetical protein	NA	U6C6J3	Ralstonia_phage	75.5	2.8e-43
AZV93573.1|1693589_1694957_+	hypothetical protein	NA	C7BGG1	Burkholderia_phage	38.3	3.0e-66
AZV93574.1|1694949_1695297_+	hypothetical protein	NA	A0A088F6Y8	Sulfitobacter_phage	44.3	7.3e-17
AZV93575.1|1695281_1695566_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93576.1|1695799_1696108_+	hypothetical protein	NA	NA	NA	NA	NA
AZV93577.1|1696104_1696401_+	hypothetical protein	NA	NA	NA	NA	NA
AZV93578.1|1696425_1697052_+	hypothetical protein	NA	NA	NA	NA	NA
AZV93579.1|1697104_1697530_+|terminase	terminase small subunit	terminase	E5AGA2	Erwinia_phage	71.1	4.6e-37
AZV93580.1|1697510_1698770_+|terminase	terminase	terminase	A0A125RNL7	Pseudomonas_phage	82.9	2.7e-202
AZV93581.1|1698981_1700367_+	DUF1073 domain-containing protein	NA	H2BD78	Pseudomonas_phage	60.6	1.5e-150
AZV93582.1|1700329_1701259_+|head	phage head morphogenesis protein	head	H2BD79	Pseudomonas_phage	61.0	4.9e-100
AZV93583.1|1701261_1702545_+	hypothetical protein	NA	G0ZND7	Cronobacter_phage	69.6	1.9e-158
AZV95468.1|1702550_1703012_+	hypothetical protein	NA	A0A125RNM2	Pseudomonas_phage	83.3	1.5e-62
AZV93584.1|1703023_1704115_+	hypothetical protein	NA	A0A125RNM3	Pseudomonas_phage	80.4	6.4e-168
AZV93585.1|1704125_1704323_+	glycoprotein	NA	A0A1V0E5P8	Salmonella_phage	68.4	1.6e-13
AZV93586.1|1704394_1704790_+	hypothetical protein	NA	G0ZNE1	Cronobacter_phage	71.1	3.7e-49
AZV95469.1|1704924_1705128_+	glycoprotein	NA	H2BD86	Pseudomonas_phage	77.4	2.4e-20
AZV93587.1|1705120_1705312_-	hypothetical protein	NA	NA	NA	NA	NA
AZV93588.1|1705346_1705742_+	hypothetical protein	NA	J7I0Q5	Pseudomonas_phage	50.0	6.1e-28
AZV93589.1|1705744_1706113_+	hypothetical protein	NA	J7I407	Pseudomonas_phage	44.0	3.6e-22
AZV93590.1|1706122_1706866_+	hypothetical protein	NA	A0A125RNN0	Pseudomonas_phage	59.4	6.3e-66
AZV93591.1|1706868_1707471_+	glycoprotein	NA	A0A125RNN1	Pseudomonas_phage	60.5	8.4e-61
AZV93592.1|1707841_1708150_+	hypothetical protein	NA	NA	NA	NA	NA
AZV93593.1|1708150_1711486_+	hypothetical protein	NA	J7HXG0	Pseudomonas_phage	47.5	2.4e-03
AZV93594.1|1711482_1711953_+	hypothetical protein	NA	A0A286S298	Klebsiella_phage	52.6	5.6e-44
AZV93595.1|1711949_1712435_+	hypothetical protein	NA	A0A2H4PI86	Pseudomonas_phage	30.8	4.3e-15
AZV93596.1|1712530_1712824_+	hypothetical protein	NA	B5WZT7	Pseudomonas_phage	45.3	1.0e-11
AZV93597.1|1712840_1715534_+	hypothetical protein	NA	A0A0H5ART3	Pseudomonas_phage	40.0	3.8e-177
>prophage 3
CP021250	Bordetella sp. J329 chromosome, complete genome	3925525	2013550	2023836	3925525	tRNA	uncultured_Mediterranean_phage(28.57%)	10	NA	NA
AZV93833.1|2013550_2014858_-	23S rRNA (uracil(1939)-C(5))-methyltransferase	NA	A0A2K5B251	Erysipelothrix_phage	25.0	2.1e-24
AZV93834.1|2015128_2015917_-	3'-5' exonuclease	NA	NA	NA	NA	NA
AZV93835.1|2015913_2016777_-	peptidase	NA	H9A126	Staphylococcus_phage	40.6	9.4e-05
AZV93836.1|2016826_2017651_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	44.9	5.0e-32
AZV93837.1|2017658_2018399_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.9	7.9e-69
AZV93838.1|2018665_2019373_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZV95498.1|2019424_2020477_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	52.3	8.5e-93
AZV93839.1|2020700_2021993_+	guanine permease	NA	A0A0R6PHV4	Moraxella_phage	36.7	1.7e-63
AZV93840.1|2022093_2022867_-	hypothetical protein	NA	NA	NA	NA	NA
AZV95499.1|2023233_2023836_-	thymidylate synthase	NA	A0A1X9I5T8	Streptococcus_phage	34.2	1.4e-18
>prophage 4
CP021250	Bordetella sp. J329 chromosome, complete genome	3925525	2758417	2764769	3925525		Acidithiobacillus_phage(85.71%)	9	NA	NA
AZV94371.1|2758417_2759800_-	hypothetical protein	NA	K4ICM1	Acidithiobacillus_phage	36.4	2.1e-75
AZV94372.1|2759881_2760271_+	addiction module toxin RelE	NA	NA	NA	NA	NA
AZV94373.1|2760251_2760608_+	transcriptional regulator	NA	NA	NA	NA	NA
AZV94374.1|2760984_2761860_+	class A beta-lactamase	NA	Q1MVP3	Enterobacteria_phage	46.9	8.8e-51
AZV94375.1|2761905_2762385_-	hypothetical protein	NA	K4I1C7	Acidithiobacillus_phage	60.1	1.5e-44
AZV94376.1|2762381_2762753_-	site-specific recombinase resolvase	NA	K4HZX2	Acidithiobacillus_phage	73.0	3.0e-45
AZV94377.1|2762752_2764132_-	recombinase	NA	K4ICM1	Acidithiobacillus_phage	89.3	2.6e-238
AZV94378.1|2764128_2764578_-	elements of external origin	NA	K4I3X1	Acidithiobacillus_phage	86.5	1.3e-69
AZV95570.1|2764577_2764769_-	hypothetical protein	NA	K4HZ94	Acidithiobacillus_phage	76.2	4.4e-16
>prophage 5
CP021250	Bordetella sp. J329 chromosome, complete genome	3925525	2768601	2803541	3925525	head,portal,capsid,protease,terminase	Acidithiobacillus_phage(36.36%)	44	NA	NA
AZV94383.1|2768601_2768859_+	hypothetical protein	NA	K4I3X3	Acidithiobacillus_phage	69.0	2.0e-24
AZV94384.1|2768870_2769353_+	hypothetical protein	NA	K4HZ96	Acidithiobacillus_phage	55.5	1.6e-41
AZV94385.1|2769349_2770198_+	hypothetical protein	NA	K4HZX9	Acidithiobacillus_phage	69.9	2.6e-108
AZV94386.1|2770203_2770827_+	hypothetical protein	NA	K4ICM8	Acidithiobacillus_phage	70.8	9.3e-79
AZV94387.1|2770838_2771693_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94388.1|2771689_2772190_+	hypothetical protein	NA	K4I3X7	Acidithiobacillus_phage	78.3	5.7e-71
AZV94389.1|2772186_2772921_+	hypothetical protein	NA	K4HZA0	Acidithiobacillus_phage	77.1	2.7e-109
AZV94390.1|2772917_2773163_+	hypothetical protein	NA	K4I1D6	Acidithiobacillus_phage	65.7	6.5e-20
AZV94391.1|2773159_2775460_+	hypothetical protein	NA	K4HZY1	Acidithiobacillus_phage	72.3	0.0e+00
AZV94392.1|2775600_2776077_+	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	75.8	2.3e-61
AZV94393.1|2776078_2776282_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94394.1|2776274_2776691_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZV95571.1|2777007_2778417_+	DNA modification methylase	NA	K4I3Y2	Acidithiobacillus_phage	60.7	2.5e-164
AZV94395.1|2778413_2779682_+	DNA methylase N-4	NA	A0A2H4JGF1	uncultured_Caudovirales_phage	94.3	8.4e-236
AZV94396.1|2779645_2780014_-	hypothetical protein	NA	A0A2H4JI44	uncultured_Caudovirales_phage	88.3	8.2e-59
AZV94397.1|2780111_2780651_-	hypothetical protein	NA	A0A2H4JE21	uncultured_Caudovirales_phage	88.5	1.7e-44
AZV94398.1|2780733_2781003_-	hypothetical protein	NA	NA	NA	NA	NA
AZV94399.1|2781109_2781637_+	elements of external origin	NA	A0A2H4JCL4	uncultured_Caudovirales_phage	94.3	4.6e-87
AZV94400.1|2781639_2783607_+|terminase	terminase	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	89.6	0.0e+00
AZV94401.1|2783629_2783836_+	hypothetical protein	NA	A0A2H4JCJ9	uncultured_Caudovirales_phage	86.8	1.1e-23
AZV94402.1|2783835_2785341_+|portal	phage portal protein	portal	A0A1B2LRR5	Wolbachia_phage	56.2	7.5e-151
AZV94403.1|2785350_2786589_+|protease	Clp protease ClpP	protease	K4HZZ6	Acidithiobacillus_phage	48.6	1.0e-68
AZV94404.1|2786590_2786971_+|head	head decoration protein	head	A0A1B2LRT0	Wolbachia_phage	52.4	2.2e-27
AZV94405.1|2786973_2787984_+|capsid	major capsid protein E	capsid	Q9JMM2	Wolbachia_phage	62.9	2.2e-122
AZV94406.1|2787983_2788268_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94407.1|2788278_2788704_+	hypothetical protein	NA	F4YCS3	Synechococcus_phage	30.9	1.4e-09
AZV94408.1|2788709_2788889_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94409.1|2788891_2789644_+	hypothetical protein	NA	A0A2D2W2E0	Stenotrophomonas_phage	50.8	2.2e-58
AZV94410.1|2789653_2790043_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94411.1|2790039_2790255_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94412.1|2790232_2790880_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94413.1|2790883_2794261_+	tape measure domain-containing protein	NA	K7RVL7	Vibrio_phage	43.1	1.2e-39
AZV94414.1|2794263_2795235_+	hypothetical protein	NA	I6NTN2	Burkholderia_phage	29.7	5.0e-23
AZV94415.1|2795254_2796397_+	hypothetical protein	NA	A0A2H4GYA7	Pseudomonas_phage	27.4	7.5e-18
AZV94416.1|2796397_2798080_+	hypothetical protein	NA	J9SU43	Pseudomonas_phage	36.0	3.4e-75
AZV94417.1|2798076_2798880_+	hypothetical protein	NA	A0A2D2W238	Stenotrophomonas_phage	41.5	4.9e-56
AZV94418.1|2798889_2799120_+	hypothetical protein	NA	A0A0S0N2N8	Pseudomonas_phage	50.7	7.2e-13
AZV94419.1|2799116_2799356_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94420.1|2799352_2801575_+	hypothetical protein	NA	A0A1L2C8W7	Pseudomonas_phage	45.5	7.2e-174
AZV94421.1|2801590_2801944_+	hypothetical protein	NA	A0A2H4GY35	Pseudomonas_phage	58.5	6.3e-32
AZV94422.1|2802011_2802317_+	hypothetical protein	NA	K4I011	Acidithiobacillus_phage	63.6	2.9e-25
AZV94423.1|2802313_2802541_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94424.1|2802537_2803047_+	glycoside hydrolase family 24	NA	A0A1I9L2C4	Xanthomonas_phage	37.2	3.3e-18
AZV94425.1|2803043_2803541_+	hypothetical protein	NA	A0A077K9R7	Ralstonia_phage	53.8	2.2e-30
>prophage 6
CP021250	Bordetella sp. J329 chromosome, complete genome	3925525	2864577	2879320	3925525	terminase	Burkholderia_virus(71.43%)	19	NA	NA
AZV94473.1|2864577_2864892_+	DNA-binding protein	NA	A0A1S5NNI6	Burkholderia_phage	52.8	4.7e-15
AZV94474.1|2864888_2865101_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94475.1|2865112_2865739_-	hypothetical protein	NA	A4JX50	Burkholderia_virus	55.3	4.2e-23
AZV94476.1|2865940_2867035_+	hypothetical protein	NA	A0A2H4FS76	Methylophilaceae_phage	46.2	1.8e-16
AZV94477.1|2867031_2867454_+	hypothetical protein	NA	J7I4J7	Pseudomonas_phage	56.0	4.7e-34
AZV94478.1|2867450_2867801_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94479.1|2867804_2868227_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94480.1|2868223_2868718_+|terminase	terminase	terminase	A0A2K9V3C4	Faecalibacterium_phage	42.9	5.0e-19
AZV94481.1|2868714_2870145_+	TerL	NA	Q6J1S4	Burkholderia_virus	75.5	1.0e-218
AZV94482.1|2870811_2871021_+	hypothetical protein	NA	NA	NA	NA	NA
AZV95576.1|2871020_2872670_+	hypothetical protein	NA	Q6J1S2	Burkholderia_virus	52.2	2.0e-149
AZV94483.1|2872666_2872975_+	hypothetical protein	NA	NA	NA	NA	NA
AZV94484.1|2872982_2873702_+	hypothetical protein	NA	Q6J1S0	Burkholderia_virus	42.2	2.9e-31
AZV94485.1|2873772_2874774_+	hypothetical protein	NA	Q6J1R9	Burkholderia_virus	74.3	3.1e-145
AZV94486.1|2874818_2875205_+	hypothetical protein	NA	Q6J1R8	Burkholderia_virus	46.3	9.3e-21
AZV94487.1|2875424_2876009_+	hypothetical protein	NA	Q6J1R6	Burkholderia_virus	59.2	3.5e-56
AZV94488.1|2876008_2878288_+	hypothetical protein	NA	Q6J1R5	Burkholderia_virus	52.9	4.2e-238
AZV94489.1|2878284_2878710_+	hypothetical protein	NA	Q6J1R4	Burkholderia_virus	45.6	2.3e-28
AZV94490.1|2878711_2879320_+	hypothetical protein	NA	Q6J1R3	Burkholderia_virus	48.5	1.0e-18
