The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	0	122073	4104318	protease,transposase,tRNA	Planktothrix_phage(16.67%)	110	NA	NA
AZW62754.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZW62755.1|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA	NA
AZW62756.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZW62757.1|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZW62758.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZW62759.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZW62760.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZW62761.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZW62762.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZW62763.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZW62764.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZW62765.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZW62766.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZW62767.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZW66148.1|20126_20531_-	lipoprotein	NA	NA	NA	NA	NA
AZW62768.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AZW62769.1|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZW62770.1|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW62771.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62772.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
AZW62773.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62774.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
AZW62775.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
AZW66149.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW62776.1|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW62777.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW62778.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62779.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
AZW62780.1|36949_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZW62781.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZW62782.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZW62783.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZW62784.1|41318_42212_+	M48 family peptidase	NA	NA	NA	NA	NA
AZW62785.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZW62786.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZW62787.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AZW62788.1|43663_44614_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62789.1|45113_45749_+	hypothetical protein	NA	NA	NA	NA	NA
AZW62790.1|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZW62791.1|46084_46978_+	hypothetical protein	NA	NA	NA	NA	NA
AZW62792.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZW62793.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZW62794.1|50141_51092_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62795.1|51134_52391_+	MFS transporter	NA	NA	NA	NA	NA
AZW62796.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZW62797.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZW62798.1|54977_55667_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW62799.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW62800.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW62801.1|57497_58448_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62802.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZW62803.1|60474_60894_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW62804.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62805.1|62442_63279_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62806.1|63473_64055_-|protease	protease	protease	NA	NA	NA	NA
AZW62807.1|64067_64385_-	ferredoxin	NA	NA	NA	NA	NA
AZW62808.1|64488_65547_-	oxidoreductase	NA	NA	NA	NA	NA
AZW62809.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZW62810.1|67482_68664_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62811.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62812.1|70129_70444_+|transposase	transposase	transposase	NA	NA	NA	NA
AZW62813.1|71636_73544_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZW62814.1|73705_74326_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZW62815.1|74357_74939_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZW62816.1|75027_75279_-	hypothetical protein	NA	NA	NA	NA	NA
AZW66150.1|75280_76030_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62817.1|76228_77638_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZW62818.1|77634_78585_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66151.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62819.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZW62820.1|82822_83527_-	DUF2837 domain-containing protein	NA	NA	NA	NA	NA
AZW62821.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZW62822.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
AZW62823.1|85481_86714_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA	NA
AZW62824.1|86731_87991_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZW62825.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZW62826.1|89110_90211_-	aminotransferase DegT	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZW62827.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZW62828.1|90793_91846_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AZW62829.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZW62830.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZW62831.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62832.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AZW62833.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZW62834.1|96203_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW62835.1|97339_98179_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZW62836.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
AZW62837.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW62838.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AZW62839.1|101788_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZW62840.1|102808_103084_+	DUF493 domain-containing protein	NA	NA	NA	NA	NA
AZW62841.1|103091_103754_+	octanoyltransferase	NA	NA	NA	NA	NA
AZW62842.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
AZW62843.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AZW62844.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZW62845.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZW62846.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62847.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZW62848.1|110552_111182_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AZW62849.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZW62850.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZW66152.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZW62851.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66153.1|114944_115961_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW62852.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZW62853.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZW62854.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW62855.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZW62856.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
AZW62857.1|121122_122073_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	164891	225402	4104318	protease,transposase,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
AZW62889.1|164891_165842_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62890.1|167285_168188_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62891.1|168165_168795_-	LemA family protein	NA	NA	NA	NA	NA
AZW62892.1|169125_170508_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZW62893.1|170541_171171_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZW62894.1|171219_172827_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZW62895.1|172851_173535_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66158.1|173616_174093_-	bacterioferritin	NA	NA	NA	NA	NA
AZW62896.1|174299_175250_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62897.1|176365_176893_+	lipoprotein	NA	NA	NA	NA	NA
AZW62898.1|176984_177800_+	lipoprotein	NA	NA	NA	NA	NA
AZW62899.1|177860_178595_+	sulfurtransferase	NA	NA	NA	NA	NA
AZW62900.1|178632_180711_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZW62901.1|180960_181233_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62902.1|181331_182420_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZW62903.1|182423_184328_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AZW62904.1|184324_187999_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AZW62905.1|188059_188623_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZW62906.1|188630_189053_-	glyoxalase	NA	NA	NA	NA	NA
AZW62907.1|189080_189500_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AZW66159.1|189528_189975_-	N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AZW62908.1|190101_190599_+	hypothetical protein	NA	NA	NA	NA	NA
AZW62909.1|190753_193024_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZW62910.1|193072_194305_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW62911.1|194403_195354_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62912.1|195399_196092_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AZW62913.1|196088_196982_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZW62914.1|197376_198477_+	aminomethyltransferase	NA	NA	NA	NA	NA
AZW62915.1|198558_198933_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZW62916.1|198992_201857_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZW62917.1|202001_202742_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZW62918.1|202811_204023_+	CoA transferase	NA	NA	NA	NA	NA
AZW62919.1|204051_205020_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW62920.1|205633_206584_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62921.1|206740_207064_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AZW62922.1|207168_208218_-	cyclase	NA	NA	NA	NA	NA
AZW62923.1|208214_209039_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AZW62924.1|209039_209336_-	YciI family protein	NA	NA	NA	NA	NA
AZW62925.1|209361_209637_-	muconolactone delta-isomerase	NA	NA	NA	NA	NA
AZW62926.1|209693_210338_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZW62927.1|210337_211024_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZW66160.1|211153_212005_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW62928.1|212055_212781_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZW62929.1|212812_214162_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZW62930.1|214273_215206_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW62931.1|215663_218459_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZW62932.1|219052_221995_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZW62933.1|222066_222786_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZW62934.1|222824_223373_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZW62935.1|223527_224427_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZW62936.1|224451_225402_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	233334	286922	4104318	protease,transposase,tRNA	Bacillus_phage(25.0%)	48	NA	NA
AZW62944.1|233334_234285_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62945.1|234371_235322_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62946.1|235318_236269_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62947.1|236367_237165_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZW62948.1|238114_238525_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZW62949.1|239546_240290_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW62950.1|240333_241377_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW62951.1|241547_243650_+	hypothetical protein	NA	NA	NA	NA	NA
AZW62952.1|245060_246017_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW62953.1|246035_246527_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZW62954.1|246523_247879_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZW62955.1|247879_248578_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZW62956.1|248574_249276_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZW62957.1|249528_250578_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZW62958.1|250683_251625_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZW62959.1|251621_253511_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZW62960.1|253597_254236_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66161.1|254378_255623_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZW62961.1|255694_256231_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZW62962.1|256382_257774_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZW62963.1|257790_258771_-	AEC family transporter	NA	NA	NA	NA	NA
AZW62964.1|258906_259890_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZW62965.1|259954_260854_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW62966.1|260960_262715_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZW62967.1|262722_263847_-	CoA transferase	NA	NA	NA	NA	NA
AZW62968.1|263860_264841_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW62969.1|265571_266522_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62970.1|267081_267627_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZW62971.1|267710_269330_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZW62972.1|269345_270500_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZW62973.1|270513_270639_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AZW62974.1|270635_272387_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZW62975.1|272383_274063_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZW62976.1|274098_274674_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AZW62977.1|275816_276095_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZW62978.1|277138_278089_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW62979.1|278075_278291_-	hypothetical protein	NA	NA	NA	NA	NA
AZW62980.1|278366_278528_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZW62981.1|278535_278676_+	hypothetical protein	NA	NA	NA	NA	NA
AZW62982.1|279194_279644_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZW62983.1|279653_280265_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZW62984.1|280423_281278_-	cytochrome c1	NA	NA	NA	NA	NA
AZW62985.1|281297_282680_-	cytochrome b	NA	NA	NA	NA	NA
AZW62986.1|282744_283386_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZW62987.1|283525_283984_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AZW62988.1|284008_284785_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZW66162.1|284838_285975_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZW62989.1|285971_286922_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	555307	614607	4104318	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
AZW63211.1|555307_556258_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63212.1|557581_558358_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW63213.1|558392_560165_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
AZW63214.1|560166_561069_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZW63215.1|561193_561553_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZW63216.1|561584_562547_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZW63217.1|562645_563596_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63218.1|563608_564544_-	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZW63219.1|564603_565443_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZW63220.1|565439_566609_-	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZW63221.1|566605_567895_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63222.1|567937_568312_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZW63223.1|568417_569155_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZW63224.1|569162_569867_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZW63225.1|570130_571651_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZW63226.1|571706_572270_+	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZW63227.1|572288_573320_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZW63228.1|573316_574105_+	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZW63229.1|574280_575270_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63230.1|577026_577977_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63231.1|579199_580102_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63232.1|580103_580958_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZW63233.1|581004_582114_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW63234.1|582124_582643_-	flavin reductase	NA	NA	NA	NA	NA
AZW63235.1|582672_583305_-	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZW63236.1|583376_584036_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZW63237.1|584032_585253_-	MFS transporter	NA	NA	NA	NA	NA
AZW63238.1|585521_586394_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZW63239.1|586549_587287_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63240.1|587289_588885_-	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZW66183.1|589016_590006_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW63241.1|590002_590713_+	oxidoreductase	NA	NA	NA	NA	NA
AZW66184.1|590808_591825_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW63242.1|592096_592723_-	aminotransferase	NA	NA	NA	NA	NA
AZW63243.1|592778_593906_-	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZW63244.1|593911_599629_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZW63245.1|599912_600128_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63246.1|600196_601141_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZW63247.1|601329_602265_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZW63248.1|602382_603954_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63249.1|604033_605242_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW63250.1|605739_606657_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZW63251.1|609017_609239_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66185.1|609569_610586_+|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZW63252.1|610670_610922_-	cell division topological specificity factor	NA	NA	NA	NA	NA
AZW63253.1|610925_611741_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZW63254.1|611853_612732_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZW63255.1|612843_614607_-|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 6
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	620762	674503	4104318	transposase	Salmonella_phage(33.33%)	48	NA	NA
AZW63259.1|620762_621713_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63260.1|621781_622780_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW63261.1|622784_623465_-	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AZW63262.1|623602_623995_+	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZW66186.1|624102_625119_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW63263.1|625358_626144_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZW63264.1|626238_627648_-	lytic transglycosylase	NA	NA	NA	NA	NA
AZW63265.1|627658_628459_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZW63266.1|628479_629250_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZW63267.1|629292_629760_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZW63268.1|629756_630707_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63269.1|632655_633534_-	fatty acid desaturase	NA	NA	NA	NA	NA
AZW63270.1|634460_637439_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63271.1|637437_637806_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63272.1|637792_638743_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63273.1|638739_639828_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63274.1|639863_640727_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW63275.1|641866_642256_-	DNA-binding protein	NA	NA	NA	NA	NA
AZW63276.1|642259_643042_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW63277.1|643075_643828_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW63278.1|644136_645276_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63279.1|645272_646064_+	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZW63280.1|646060_646810_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZW63281.1|646806_647679_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW63282.1|647678_648680_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW63283.1|648676_649840_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW63284.1|649865_650549_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63285.1|650502_651837_+	CoA ligase	NA	NA	NA	NA	NA
AZW63286.1|651829_652924_+	CoA transferase	NA	NA	NA	NA	NA
AZW66187.1|653690_654641_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63287.1|656581_657841_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63288.1|657837_659376_+	SpoVR family protein	NA	NA	NA	NA	NA
AZW63289.1|659372_660569_-	MFS transporter	NA	NA	NA	NA	NA
AZW63290.1|660565_661957_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW63291.1|661953_662970_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW63292.1|663038_664274_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZW63293.1|664374_665169_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63294.1|665538_665946_+	GFA family protein	NA	NA	NA	NA	NA
AZW63295.1|666363_666636_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AZW63296.1|667217_668072_+	urease accessory protein UreD	NA	NA	NA	NA	NA
AZW63297.1|668172_668475_+	urease subunit gamma	NA	NA	NA	NA	NA
AZW63298.1|668501_669137_+	urease accessory protein UreJ	NA	NA	NA	NA	NA
AZW63299.1|669153_669462_+	urease subunit beta	NA	NA	NA	NA	NA
AZW63300.1|669458_671174_+	urease subunit alpha	NA	NA	NA	NA	NA
AZW63301.1|671176_671794_+	urease accessory protein UreE	NA	NA	NA	NA	NA
AZW63302.1|671894_672479_+	urease accessory protein UreF	NA	NA	NA	NA	NA
AZW63303.1|672503_673148_+	urease accessory protein UreG	NA	NA	NA	NA	NA
AZW63304.1|673552_674503_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	723390	763391	4104318	integrase,protease,transposase,tRNA	Pseudomonas_phage(33.33%)	32	720689:720707	740577:740595
720689:720707	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
AZW63340.1|723390_724038_+|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AZW63341.1|724034_724817_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AZW63342.1|724889_725981_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
AZW63343.1|726260_727388_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
AZW63344.1|727729_728776_+	Fic family protein	NA	NA	NA	NA	NA
AZW66191.1|728786_728927_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZW63345.1|728923_732043_+	restriction endonuclease	NA	NA	NA	NA	NA
AZW63346.1|732044_734996_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
AZW63347.1|735011_736223_+	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AZW63348.1|736219_736420_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63349.1|736406_737357_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63350.1|737373_737868_+	DUF4276 domain-containing protein	NA	NA	NA	NA	NA
AZW63351.1|737871_738129_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63352.1|738153_739584_+	ATP-dependent helicase	NA	NA	NA	NA	NA
AZW63353.1|739665_739950_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
AZW63354.1|740733_741684_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
740577:740595	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
AZW63355.1|742102_744667_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZW63356.1|744711_746565_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63357.1|746897_748469_+	winged helix family transcriptional regulator	NA	NA	NA	NA	NA
AZW63358.1|749910_750861_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63359.1|750946_751687_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63360.1|751913_752861_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63361.1|754248_755199_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63362.1|755185_755374_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63363.1|755392_756208_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63364.1|756340_757780_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW63365.1|757793_758135_+	cupin domain-containing protein	NA	NA	NA	NA	NA
AZW63366.1|758189_759845_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZW63367.1|759996_761007_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW63368.1|761139_761913_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63369.1|762256_762454_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63370.1|762440_763391_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	773318	820936	4104318	transposase,holin	Bovine_alphaherpesvirus(10.0%)	46	NA	NA
AZW63378.1|773318_774269_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63379.1|774407_775160_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
AZW63380.1|775398_777123_+	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
AZW63381.1|777142_778402_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZW63382.1|778416_779511_-	CCA-adding enzyme	NA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
AZW63383.1|779507_781634_-	lytic transglycosylase	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
AZW63384.1|781646_782327_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AZW66195.1|782604_783978_+	MFS transporter	NA	NA	NA	NA	NA
AZW63385.1|783979_784999_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
AZW63386.1|785062_786034_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63387.1|786098_787049_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63388.1|787147_787990_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZW63389.1|787989_788325_-|holin	phage holin family protein	holin	NA	NA	NA	NA
AZW63390.1|788395_789814_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
AZW63391.1|790093_791134_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AZW63392.1|791213_791465_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AZW63393.1|791575_792874_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.9	1.6e-125
AZW63394.1|793022_793877_+	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA	NA
AZW63395.1|793873_794764_+	acyltransferase	NA	NA	NA	NA	NA
AZW63396.1|794806_795718_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
AZW63397.1|795744_796437_+	DUF484 domain-containing protein	NA	NA	NA	NA	NA
AZW63398.1|796451_797432_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
AZW63399.1|797444_799586_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AZW63400.1|799634_800603_-	nickel transporter	NA	NA	NA	NA	NA
AZW66196.1|800593_801217_-	DUF1007 domain-containing protein	NA	NA	NA	NA	NA
AZW63401.1|801222_802158_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63402.1|802154_803051_-	metal ABC transporter permease	NA	NA	NA	NA	NA
AZW63403.1|803047_803770_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
AZW63404.1|803760_803961_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63405.1|804098_804602_+	transcriptional repressor	NA	NA	NA	NA	NA
AZW63406.1|804878_805994_+	GTP-binding protein	NA	NA	NA	NA	NA
AZW63407.1|806136_806601_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
AZW63408.1|806748_807288_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AZW63409.1|807309_808644_+	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
AZW66197.1|808657_808963_-	RND transporter	NA	NA	NA	NA	NA
AZW63410.1|809387_809969_+	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA	NA
AZW63411.1|810050_811001_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63412.1|811099_812050_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63413.1|812490_813396_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW63414.1|813451_815059_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZW63415.1|815312_816818_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZW63416.1|816832_817297_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZW63417.1|817586_818537_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63418.1|818699_819230_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63419.1|819229_819541_+	cell division protein ZapA	NA	NA	NA	NA	NA
AZW63420.1|819985_820936_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	1005150	1099187	4104318	transposase	Bacillus_virus(27.27%)	88	NA	NA
AZW63561.1|1005150_1006101_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63562.1|1006203_1006866_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63563.1|1006968_1007379_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63564.1|1007483_1008485_+	amidase	NA	NA	NA	NA	NA
AZW63565.1|1008487_1009684_+	CoA transferase	NA	NA	NA	NA	NA
AZW63566.1|1009704_1010508_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW63567.1|1010588_1010885_+	histidine kinase	NA	NA	NA	NA	NA
AZW63568.1|1010915_1011479_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW66210.1|1011519_1012377_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW63569.1|1012384_1013134_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
AZW63570.1|1013155_1014028_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63571.1|1014056_1014836_+	KR domain-containing protein	NA	NA	NA	NA	NA
AZW63572.1|1014869_1015667_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63573.1|1017118_1018291_+	hypothetical protein	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	1.1e-59
AZW63574.1|1018321_1018714_+	RidA family protein	NA	NA	NA	NA	NA
AZW63575.1|1018707_1019568_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW63576.1|1019571_1020534_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW66211.1|1021310_1022000_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
AZW63577.1|1022860_1023811_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63578.1|1024160_1025030_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63579.1|1025100_1025796_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
AZW63580.1|1025785_1026295_+	nucleoside deaminase	NA	NA	NA	NA	NA
AZW63581.1|1026291_1027512_+	MFS transporter	NA	NA	NA	NA	NA
AZW63582.1|1027459_1028362_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63583.1|1029248_1030535_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63584.1|1030573_1031947_+	amidase	NA	NA	NA	NA	NA
AZW63585.1|1031985_1032687_-	riboflavin synthase	NA	NA	NA	NA	NA
AZW63586.1|1032985_1033975_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW63587.1|1034075_1034537_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZW63588.1|1034552_1035101_-	cysteine dioxygenase	NA	NA	NA	NA	NA
AZW63589.1|1035242_1036718_-	long-chain fatty acid--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
AZW63590.1|1036823_1037915_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
AZW63591.1|1037918_1038701_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW63592.1|1038710_1039499_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
AZW63593.1|1040624_1041059_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZW63594.1|1041055_1042066_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZW63595.1|1042109_1043036_-	VOC family protein	NA	NA	NA	NA	NA
AZW63596.1|1043322_1043691_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
AZW66212.1|1043907_1044858_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66213.1|1044839_1047329_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.3e-86
AZW63597.1|1047377_1048070_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
AZW63598.1|1048142_1049342_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZW63599.1|1049359_1050265_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63600.1|1050380_1051310_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW66214.1|1051335_1052682_+	MFS transporter	NA	NA	NA	NA	NA
AZW66215.1|1052709_1053459_+	NAD(P)-dependent oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
AZW63601.1|1053472_1054255_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZW63602.1|1054447_1055398_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63603.1|1055459_1056605_-	porin	NA	NA	NA	NA	NA
AZW63604.1|1057081_1057918_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
AZW63605.1|1057987_1058953_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63606.1|1058949_1059900_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63607.1|1059886_1060081_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63608.1|1060285_1060828_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63609.1|1061863_1062814_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63610.1|1063055_1063424_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63611.1|1063469_1064594_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66216.1|1065728_1066469_-	oxidoreductase	NA	NA	NA	NA	NA
AZW63612.1|1066572_1067193_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63613.1|1067296_1068247_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63614.1|1068243_1070352_-	AsmA family protein	NA	NA	NA	NA	NA
AZW63615.1|1070496_1071156_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZW63616.1|1071187_1071652_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZW63617.1|1071927_1072113_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63618.1|1072164_1072917_-	DNA-binding protein	NA	NA	NA	NA	NA
AZW63619.1|1072923_1074186_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63620.1|1074227_1075466_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63621.1|1076543_1077671_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZW63622.1|1077681_1078509_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZW63623.1|1078495_1079362_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZW63624.1|1080728_1081133_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63625.1|1081224_1082175_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66217.1|1082544_1083456_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW63626.1|1083470_1084181_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63627.1|1084177_1085422_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZW63628.1|1085423_1085858_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZW63629.1|1085886_1086192_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZW63630.1|1086085_1086304_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63631.1|1086290_1087241_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63632.1|1087297_1088446_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZW63633.1|1088526_1089477_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63634.1|1090008_1090806_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63635.1|1090853_1091507_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW63636.1|1091463_1092552_-	methionine import ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZW63637.1|1092716_1094942_-	glycosyl hydrolase	NA	NA	NA	NA	NA
AZW63638.1|1097219_1098116_+	inositol monophosphatase	NA	NA	NA	NA	NA
AZW63639.1|1098004_1098250_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63640.1|1098236_1099187_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	1129573	1199494	4104318	protease,transposase	uncultured_Mediterranean_phage(25.0%)	51	NA	NA
AZW63669.1|1129573_1130524_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63670.1|1130580_1131693_+	malate dehydrogenase	NA	NA	NA	NA	NA
AZW63671.1|1134076_1135027_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63672.1|1135617_1136394_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZW63673.1|1136511_1136775_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZW63674.1|1136875_1137880_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZW63675.1|1138080_1139682_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZW63676.1|1139707_1140466_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW63677.1|1140557_1141214_-	adenylate kinase	NA	NA	NA	NA	NA
AZW63678.1|1141304_1142069_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZW63679.1|1142078_1142267_-	hypothetical protein	NA	NA	NA	NA	NA
AZW63680.1|1142322_1143366_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZW63681.1|1143362_1143776_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZW63682.1|1143772_1144393_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZW63683.1|1144673_1145624_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63684.1|1145791_1147183_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZW63685.1|1147255_1147834_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZW63686.1|1147950_1149348_+	chloride channel protein EriC	NA	NA	NA	NA	NA
AZW63687.1|1149463_1150669_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZW63688.1|1150768_1151287_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZW63689.1|1151381_1151627_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZW63690.1|1151854_1152169_+|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZW63691.1|1152258_1157448_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZW66219.1|1157444_1159613_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZW63692.1|1159632_1161984_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZW63693.1|1161988_1163308_+	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AZW63694.1|1163326_1165000_+	MCE family protein	NA	NA	NA	NA	NA
AZW63695.1|1165004_1165673_+	lipoprotein	NA	NA	NA	NA	NA
AZW63696.1|1165829_1169651_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZW63697.1|1169981_1170932_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63698.1|1170953_1172099_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63699.1|1172247_1173177_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW63700.1|1173173_1174262_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZW63701.1|1174258_1175062_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZW63702.1|1175058_1175790_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZW63703.1|1175847_1177137_-	MFS transporter	NA	NA	NA	NA	NA
AZW63704.1|1177233_1177836_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63705.1|1182388_1182727_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW63706.1|1183395_1183701_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63707.1|1185407_1186358_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63708.1|1186354_1187686_-	MFS transporter	NA	NA	NA	NA	NA
AZW63709.1|1188925_1190947_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZW63710.1|1190939_1191581_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZW63711.1|1191577_1191985_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZW63712.1|1191981_1192782_+	SURF1 family protein	NA	NA	NA	NA	NA
AZW63713.1|1192856_1193561_+	oxidoreductase	NA	NA	NA	NA	NA
AZW63714.1|1193592_1194387_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZW63715.1|1194383_1195334_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63716.1|1195432_1195867_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZW63717.1|1195949_1198286_+	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
AZW66220.1|1198477_1199494_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 11
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	1299714	1356924	4104318	transposase	Klosneuvirus(16.67%)	51	NA	NA
AZW63795.1|1299714_1300665_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63796.1|1304411_1305023_-	DUF2239 domain-containing protein	NA	NA	NA	NA	NA
AZW63797.1|1305245_1306706_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
AZW63798.1|1306802_1308395_+	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
AZW63799.1|1308381_1308660_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63800.1|1308718_1309006_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZW63801.1|1309007_1310348_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZW63802.1|1310443_1311133_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63803.1|1311145_1312576_+	MFS transporter	NA	NA	NA	NA	NA
AZW63804.1|1314300_1315122_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63805.1|1315132_1316704_+	amidohydrolase	NA	NA	NA	NA	NA
AZW63806.1|1316732_1317710_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63807.1|1317736_1318540_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
AZW63808.1|1318536_1319331_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW63809.1|1319338_1320574_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZW63810.1|1320566_1321001_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZW63811.1|1321750_1322701_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63812.1|1323322_1325050_-	sodium-independent anion transporter	NA	NA	NA	NA	NA
AZW63813.1|1325161_1326520_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZW63814.1|1326640_1326826_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63815.1|1326812_1327763_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63816.1|1327803_1328874_+	FUSC family protein	NA	NA	NA	NA	NA
AZW66226.1|1328896_1329775_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZW63817.1|1329946_1330918_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZW63818.1|1331080_1331923_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW63819.1|1332084_1332765_+	anti-sigma factor	NA	NA	NA	NA	NA
AZW63820.1|1332758_1333928_+	amine oxidase	NA	NA	NA	NA	NA
AZW63821.1|1333924_1334956_+	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZW63822.1|1334999_1336241_+	MFS transporter	NA	NA	NA	NA	NA
AZW63823.1|1336275_1337808_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZW63824.1|1337888_1338512_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZW63825.1|1338542_1339154_+	LysE family translocator	NA	NA	NA	NA	NA
AZW63826.1|1339189_1339660_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZW63827.1|1339834_1340083_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63828.1|1340090_1341095_+	peptidase M20	NA	NA	NA	NA	NA
AZW63829.1|1341131_1342646_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW63830.1|1342649_1343609_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW63831.1|1343637_1344441_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW63832.1|1344442_1346077_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZW63833.1|1346160_1347222_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZW63834.1|1347420_1347690_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63835.1|1347693_1348218_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZW63836.1|1348633_1349584_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63837.1|1349580_1350651_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZW63838.1|1350723_1351362_+	DedA family protein	NA	NA	NA	NA	NA
AZW63839.1|1351656_1351884_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZW63840.1|1352006_1352720_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZW63841.1|1352964_1353915_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63842.1|1354018_1354300_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63843.1|1354414_1355863_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZW63844.1|1355973_1356924_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	1447157	1499310	4104318	transposase,tRNA	Salmonella_phage(25.0%)	45	NA	NA
AZW63926.1|1447157_1448108_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63927.1|1448274_1448628_+	cytochrome C	NA	NA	NA	NA	NA
AZW63928.1|1448640_1449003_+	cytochrome	NA	NA	NA	NA	NA
AZW63929.1|1449044_1449470_-	DUF1841 domain-containing protein	NA	NA	NA	NA	NA
AZW63930.1|1449672_1450929_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
AZW63931.1|1451127_1452108_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63932.1|1452257_1453499_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63933.1|1453597_1454548_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63934.1|1454556_1455252_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
AZW63935.1|1458073_1458673_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
AZW63936.1|1458683_1460849_-	K(+)-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
AZW63937.1|1460872_1462657_-	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AZW63938.1|1462656_1462746_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AZW63939.1|1463440_1463713_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
AZW63940.1|1463712_1465779_+	cation acetate symporter	NA	NA	NA	NA	NA
AZW63941.1|1465775_1466726_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63942.1|1466824_1467775_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63943.1|1467890_1468223_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AZW63944.1|1468219_1468906_-	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AZW63945.1|1468892_1469852_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
AZW66234.1|1469893_1472254_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
AZW63946.1|1472253_1472886_+	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AZW63947.1|1472948_1474328_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
AZW63948.1|1474374_1475730_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
AZW63949.1|1476008_1476257_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63950.1|1476444_1476762_-	virulence factor	NA	NA	NA	NA	NA
AZW63951.1|1477034_1477550_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
AZW63952.1|1477643_1477805_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63953.1|1477820_1478576_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZW63954.1|1478914_1479121_+	hypothetical protein	NA	NA	NA	NA	NA
AZW63955.1|1479128_1479788_-	antibiotic resistance protein	NA	NA	NA	NA	NA
AZW63956.1|1480082_1482287_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZW63957.1|1482397_1483621_-	MFS transporter	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
AZW63958.1|1483743_1484718_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZW63959.1|1484785_1485979_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZW63960.1|1485993_1486794_-	siderophore ferric iron reductase	NA	NA	NA	NA	NA
AZW63961.1|1486790_1488647_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AZW63962.1|1488643_1489249_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZW63963.1|1489267_1490653_-	alcaligin biosynthesis enzyme	NA	NA	NA	NA	NA
AZW63964.1|1491378_1492605_+	transporter	NA	NA	NA	NA	NA
AZW63965.1|1492693_1493476_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZW63966.1|1493574_1494525_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW63967.1|1494551_1495325_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZW63968.1|1495336_1496578_+	MFS transporter	NA	NA	NA	NA	NA
AZW63969.1|1498359_1499310_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	1543235	1602099	4104318	protease,transposase,tRNA	Streptococcus_virus(11.11%)	53	NA	NA
AZW66235.1|1543235_1543724_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AZW64017.1|1543841_1544420_+|protease	protease	protease	NA	NA	NA	NA
AZW64018.1|1544492_1544894_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AZW64019.1|1544992_1545943_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64020.1|1545949_1547062_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
AZW64021.1|1547748_1548951_+	MFS transporter	NA	NA	NA	NA	NA
AZW64022.1|1549154_1551815_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64023.1|1551827_1555232_+	nuclease	NA	NA	NA	NA	NA
AZW64024.1|1555899_1558125_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
AZW64025.1|1558171_1558498_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AZW64026.1|1558548_1559157_+	recombination protein RecR	NA	NA	NA	NA	NA
AZW64027.1|1559255_1560206_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64028.1|1560275_1561040_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
AZW64029.1|1561036_1561636_-	hypothetical protein	NA	NA	NA	NA	NA
AZW66236.1|1561739_1562585_-	hypothetical protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
AZW64030.1|1562650_1563277_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
AZW64031.1|1563273_1564224_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64032.1|1564210_1564399_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64033.1|1564322_1565444_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
AZW64034.1|1565424_1566426_-	aminopeptidase	NA	NA	NA	NA	NA
AZW64035.1|1566531_1568043_-	thiol oxidoreductase	NA	NA	NA	NA	NA
AZW64036.1|1568039_1569344_-	peptidase	NA	NA	NA	NA	NA
AZW64037.1|1569455_1570016_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZW64038.1|1570283_1570838_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
AZW64039.1|1571293_1571509_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
AZW66237.1|1571763_1574361_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
AZW64040.1|1574357_1575545_+	cupin	NA	NA	NA	NA	NA
AZW64041.1|1576204_1576819_+	fimbrial protein	NA	NA	NA	NA	NA
AZW64042.1|1576907_1578035_-	lipoprotein	NA	NA	NA	NA	NA
AZW64043.1|1578046_1578952_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AZW64044.1|1579844_1580795_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64045.1|1580976_1581729_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
AZW64046.1|1581797_1582457_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
AZW64047.1|1582453_1583182_+	glutamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
AZW64048.1|1583194_1585474_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
AZW64049.1|1585498_1585702_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AZW64050.1|1585743_1586391_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
AZW64051.1|1586511_1587429_-	cytochrome C	NA	NA	NA	NA	NA
AZW64052.1|1587425_1588139_-	cytochrome C	NA	NA	NA	NA	NA
AZW64053.1|1588376_1589147_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW64054.1|1589151_1589751_-	NlpC/P60 family protein	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
AZW64055.1|1589995_1591486_+	AMP nucleosidase	NA	NA	NA	NA	NA
AZW64056.1|1591544_1591829_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW64057.1|1591825_1591954_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64058.1|1591966_1592122_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64059.1|1592394_1593321_-	YicC family protein	NA	NA	NA	NA	NA
AZW64060.1|1593457_1594198_+	ribonuclease PH	NA	NA	NA	NA	NA
AZW64061.1|1594364_1595741_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW64062.1|1595922_1596828_+	transcriptional regulator	NA	NA	NA	NA	NA
AZW64063.1|1596862_1598602_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.1	1.0e-10
AZW64064.1|1598479_1600282_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZW64065.1|1600399_1601050_+	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	NA	NA	NA	NA
AZW64066.1|1601148_1602099_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	1647271	1702862	4104318	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
AZW64097.1|1647271_1648222_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64098.1|1648280_1649054_+	oxidoreductase	NA	NA	NA	NA	NA
AZW64099.1|1649046_1650603_+	LTA synthase family protein	NA	NA	NA	NA	NA
AZW64100.1|1650599_1651550_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64101.1|1652876_1653479_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64102.1|1653718_1654420_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZW64103.1|1654413_1655196_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AZW64104.1|1655380_1656331_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64105.1|1656429_1657167_-	hypothetical protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AZW64106.1|1657356_1658115_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW64107.1|1658161_1659151_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64108.1|1659328_1660297_-	transporter	NA	NA	NA	NA	NA
AZW64109.1|1661836_1662805_+	AAA family ATPase	NA	NA	NA	NA	NA
AZW64110.1|1662813_1663755_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AZW64111.1|1664228_1665239_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66241.1|1665229_1666744_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AZW64112.1|1666740_1668087_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66242.1|1668089_1669124_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AZW64113.1|1669173_1670799_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AZW64114.1|1671351_1672302_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64115.1|1672406_1673354_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66243.1|1673407_1675222_-	histidine kinase	NA	NA	NA	NA	NA
AZW64116.1|1675214_1675889_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW64117.1|1676018_1679093_+	autotransporter SphB2	NA	NA	NA	NA	NA
AZW64118.1|1679106_1679406_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW66244.1|1679720_1680344_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZW64119.1|1680587_1681457_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
AZW64120.1|1681434_1682379_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW66245.1|1682464_1683436_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW66246.1|1683503_1684277_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW64121.1|1684273_1685470_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZW64122.1|1685500_1686451_-	hydrolase	NA	NA	NA	NA	NA
AZW64123.1|1686672_1687362_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZW64124.1|1687426_1688182_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW64125.1|1688233_1689226_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64126.1|1689235_1690189_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64127.1|1690304_1691267_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64128.1|1692668_1693097_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64129.1|1693093_1694044_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66247.1|1694337_1695060_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZW64130.1|1695498_1696686_-	MFS transporter	NA	NA	NA	NA	NA
AZW64131.1|1696689_1697070_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64132.1|1698789_1699761_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64133.1|1699774_1700488_+	NAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW64134.1|1700492_1701410_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64135.1|1701516_1701813_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64136.1|1701911_1702862_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	2023031	2071046	4104318	transposase,tRNA	Moraxella_phage(16.67%)	44	NA	NA
AZW64385.1|2023031_2023982_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64386.1|2024080_2026681_-	DUF3394 domain-containing protein	NA	NA	NA	NA	NA
AZW64387.1|2026787_2027792_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW64388.1|2027900_2029241_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
AZW64389.1|2029281_2030310_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64390.1|2030505_2031051_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64391.1|2031047_2031608_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
AZW64392.1|2031706_2032657_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64393.1|2032694_2033282_+	DUF1949 domain-containing protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
AZW64394.1|2033299_2033683_-	thioredoxin	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
AZW64395.1|2035042_2036335_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
AZW64396.1|2036469_2037510_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
AZW66262.1|2037607_2038624_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZW64397.1|2038891_2039539_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZW64398.1|2039664_2040423_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
AZW66263.1|2040497_2041187_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
AZW64399.1|2041204_2042089_+	peptidase	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
AZW64400.1|2042085_2042865_+	3'-5' exonuclease	NA	NA	NA	NA	NA
AZW64401.1|2042891_2043569_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66264.1|2043857_2044610_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64402.1|2044728_2046129_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
AZW64403.1|2046152_2046551_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZW64404.1|2046726_2046927_+	copper chaperone	NA	NA	NA	NA	NA
AZW64405.1|2047065_2047794_+	glutaredoxin	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
AZW64406.1|2047927_2049343_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
AZW64407.1|2049346_2050210_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AZW64408.1|2050222_2050972_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
AZW64409.1|2051154_2053170_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZW66265.1|2053151_2053700_-	arylesterase	NA	NA	NA	NA	NA
AZW64410.1|2053776_2054496_+	ABC transporter	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
AZW64411.1|2054594_2055545_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64412.1|2055643_2056594_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64413.1|2056742_2057081_-	phospholipid-binding protein	NA	NA	NA	NA	NA
AZW64414.1|2057138_2057300_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AZW64415.1|2057331_2057532_-	CsbD family protein	NA	NA	NA	NA	NA
AZW64416.1|2057797_2060371_-	cyanophycin synthetase	NA	NA	NA	NA	NA
AZW64417.1|2060441_2063015_-	cyanophycin synthetase	NA	NA	NA	NA	NA
AZW64418.1|2065541_2066030_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
AZW64419.1|2066121_2067273_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZW64420.1|2067326_2068148_+	DUF455 domain-containing protein	NA	NA	NA	NA	NA
AZW64421.1|2068186_2069416_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
AZW64422.1|2069544_2069985_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
AZW64423.1|2069929_2070109_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64424.1|2070095_2071046_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	2074439	2135644	4104318	protease,transposase,tRNA	Lake_Baikal_phage(21.43%)	53	NA	NA
AZW64429.1|2074439_2077301_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
AZW64430.1|2077290_2078256_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
AZW64431.1|2078315_2080310_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
AZW64432.1|2080408_2081359_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64433.1|2081355_2081730_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64434.1|2081991_2083200_+	acyl-CoA desaturase	NA	NA	NA	NA	NA
AZW64435.1|2083196_2085497_+	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AZW64436.1|2085549_2088162_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AZW64437.1|2088521_2090447_-	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AZW64438.1|2090443_2091340_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AZW64439.1|2091346_2092486_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AZW64440.1|2092485_2093307_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AZW64441.1|2094877_2095207_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZW64442.1|2095589_2096846_+	autotransporter Phg	NA	NA	NA	NA	NA
AZW64443.1|2096920_2097202_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64444.1|2097243_2097564_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64445.1|2097870_2098074_+	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AZW64446.1|2098157_2098724_+	DUF924 domain-containing protein	NA	NA	NA	NA	NA
AZW64447.1|2099069_2099270_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AZW64448.1|2099381_2099960_-	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AZW64449.1|2100138_2101449_+	trigger factor	NA	NA	NA	NA	NA
AZW64450.1|2101451_2102105_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AZW64451.1|2102209_2103514_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AZW64452.1|2103702_2106156_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AZW64453.1|2106279_2107230_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64454.1|2107457_2108681_+	CoA transferase	NA	NA	NA	NA	NA
AZW64455.1|2108746_2109718_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64456.1|2109730_2110186_+	MaoC family dehydratase	NA	NA	NA	NA	NA
AZW64457.1|2110199_2111003_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZW64458.1|2110999_2111431_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64459.1|2111427_2112585_+	thiolase	NA	NA	NA	NA	NA
AZW64460.1|2112606_2113383_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZW64461.1|2115547_2116264_+	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZW64462.1|2116256_2116898_+	CoA transferase subunit B	NA	NA	NA	NA	NA
AZW64463.1|2116932_2117664_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64464.1|2117681_2117894_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64465.1|2118464_2119415_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64466.1|2120972_2121701_-	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
AZW64467.1|2121751_2122954_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZW64468.1|2123031_2125068_+	UvrABC system protein B	NA	NA	NA	NA	NA
AZW64469.1|2125320_2125812_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AZW64470.1|2126027_2126540_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AZW64471.1|2126557_2127769_+	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AZW64472.1|2127806_2128217_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AZW64473.1|2128218_2128542_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AZW64474.1|2128544_2129057_+	co-chaperone protein HscB	NA	NA	NA	NA	NA
AZW64475.1|2129186_2131049_+	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AZW64476.1|2131058_2131400_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AZW64477.1|2131399_2131594_+	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AZW64478.1|2131718_2132612_+	methylglyoxal synthase	NA	NA	NA	NA	NA
AZW64479.1|2132608_2133559_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64480.1|2133683_2134493_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW64481.1|2134693_2135644_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	2163427	2215224	4104318	protease,transposase,tRNA	Klosneuvirus(22.22%)	50	NA	NA
AZW64501.1|2163427_2166052_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
AZW64502.1|2166038_2166293_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
AZW64503.1|2166359_2166941_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64504.1|2167244_2167505_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AZW64505.1|2167670_2168294_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AZW64506.1|2168293_2169067_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AZW64507.1|2169063_2170272_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AZW64508.1|2170297_2170771_-	RidA family protein	NA	NA	NA	NA	NA
AZW64509.1|2170844_2171795_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64510.1|2171893_2173243_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZW64511.1|2174008_2174764_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
AZW64512.1|2174856_2177739_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
AZW64513.1|2178061_2178487_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
AZW64514.1|2178514_2179663_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AZW64515.1|2179659_2180166_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZW64516.1|2180172_2181468_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AZW64517.1|2181508_2182813_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AZW64518.1|2182814_2183453_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64519.1|2183455_2184616_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AZW64520.1|2184642_2185998_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AZW64521.1|2186001_2187072_+	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AZW64522.1|2187210_2187447_+	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AZW64523.1|2187534_2188641_+	GTPase HflX	NA	NA	NA	NA	NA
AZW64524.1|2188606_2189911_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AZW64525.1|2189929_2190829_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
AZW64526.1|2191012_2192170_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AZW64527.1|2192234_2193542_+	adenylosuccinate synthetase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
AZW64528.1|2193655_2194195_+	phosphoribosyltransferase	NA	NA	NA	NA	NA
AZW64529.1|2194472_2194685_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
AZW64530.1|2194704_2196735_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
AZW66267.1|2197534_2199703_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
AZW64531.1|2200112_2200412_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64532.1|2200696_2201110_+	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
AZW64533.1|2201069_2202020_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64534.1|2202118_2203069_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64535.1|2203055_2203256_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64536.1|2203268_2204354_+	AI-2E family transporter	NA	NA	NA	NA	NA
AZW64537.1|2204369_2205131_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW64538.1|2205127_2206051_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
AZW64539.1|2206149_2206674_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZW64540.1|2206682_2207426_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AZW64541.1|2207521_2207761_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64542.1|2207774_2207927_-	lipoprotein	NA	NA	NA	NA	NA
AZW64543.1|2208012_2209503_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
AZW64544.1|2209594_2210533_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
AZW64545.1|2210529_2210706_-	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA	NA
AZW64546.1|2210708_2211371_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
AZW66268.1|2212992_2213136_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
AZW64547.1|2213132_2214107_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64548.1|2214273_2215224_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	2221194	2277288	4104318	transposase	uncultured_Caudovirales_phage(20.0%)	55	NA	NA
AZW64554.1|2221194_2222145_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64555.1|2223190_2225056_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZW66269.1|2225313_2226834_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZW64556.1|2226921_2227572_-	flavodoxin family protein	NA	NA	NA	NA	NA
AZW64557.1|2228520_2229816_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AZW64558.1|2229837_2230722_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW66270.1|2230820_2231696_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZW64559.1|2231685_2232042_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
AZW64560.1|2232115_2233147_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZW64561.1|2233276_2233456_-	DUF3008 domain-containing protein	NA	NA	NA	NA	NA
AZW64562.1|2233553_2234078_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
AZW64563.1|2234088_2234925_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW64564.1|2235037_2235409_+	transcriptional regulator	NA	NA	NA	NA	NA
AZW64565.1|2235405_2235957_+	ATPase	NA	NA	NA	NA	NA
AZW64566.1|2235972_2237664_-	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AZW64567.1|2237712_2238393_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64568.1|2238640_2239105_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64569.1|2239274_2240204_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZW64570.1|2240216_2240864_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64571.1|2240937_2242755_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AZW64572.1|2242838_2243789_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64573.1|2244441_2245392_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64574.1|2245410_2245758_-	GFA family protein	NA	NA	NA	NA	NA
AZW64575.1|2245786_2247226_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
AZW64576.1|2247244_2247640_-	VOC family protein	NA	NA	NA	NA	NA
AZW64577.1|2247814_2248423_+	peptidase S16	NA	NA	NA	NA	NA
AZW64578.1|2248435_2249254_+	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
AZW64579.1|2249205_2250180_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZW64580.1|2250208_2251270_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64581.1|2251266_2253483_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZW64582.1|2253496_2253955_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AZW64583.1|2254112_2254457_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64584.1|2254613_2255519_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW66271.1|2255605_2256619_+	flavin-nucleotide-binding protein	NA	NA	NA	NA	NA
AZW66272.1|2258598_2259615_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW64585.1|2259757_2261110_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AZW64586.1|2261284_2261581_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64587.1|2262718_2263669_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64588.1|2264154_2264331_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64589.1|2264302_2264941_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64590.1|2265015_2265987_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64591.1|2265990_2266845_+	polysaccharide deacetylase	NA	NA	NA	NA	NA
AZW64592.1|2266863_2267685_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW64593.1|2267716_2268511_+	amidase	NA	NA	NA	NA	NA
AZW64594.1|2268559_2269165_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66273.1|2269161_2269956_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW64595.1|2270241_2271747_-	microcystin degradation protein MlrC	NA	NA	NA	NA	NA
AZW64596.1|2271788_2272571_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
AZW64597.1|2272640_2273087_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64598.1|2273083_2274310_-	NnrS family protein	NA	NA	NA	NA	NA
AZW64599.1|2274302_2274707_-	preprotein translocase subunit TatC	NA	NA	NA	NA	NA
AZW64600.1|2274866_2275169_+	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
AZW64601.1|2275165_2276116_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64602.1|2276102_2276294_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64603.1|2276337_2277288_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	2503995	2559475	4104318	transposase,tRNA	Planktothrix_phage(40.0%)	50	NA	NA
AZW64787.1|2503995_2504946_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64788.1|2505425_2506082_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AZW64789.1|2506096_2507764_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZW64790.1|2507766_2508396_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW64791.1|2508607_2509702_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW64792.1|2509846_2510659_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AZW64793.1|2510662_2512366_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA	NA
AZW64794.1|2512416_2513547_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZW64795.1|2513733_2514810_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
AZW66281.1|2514891_2515542_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZW64796.1|2515556_2516990_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
AZW64797.1|2517243_2518062_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW64798.1|2518058_2518763_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
AZW64799.1|2519662_2520778_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64800.1|2520811_2521186_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64801.1|2521208_2522366_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
AZW64802.1|2522378_2522612_-	lipoprotein	NA	NA	NA	NA	NA
AZW64803.1|2523246_2526216_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZW64804.1|2526230_2526440_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZW64805.1|2526591_2527221_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64806.1|2527217_2529335_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
AZW64807.1|2529331_2530012_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
AZW64808.1|2530008_2530569_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
AZW64809.1|2530575_2531673_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZW64810.1|2531810_2532419_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
AZW64811.1|2532415_2533708_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZW64812.1|2533721_2534264_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
AZW64813.1|2534273_2535110_-	M48 family peptidase	NA	NA	NA	NA	NA
AZW64814.1|2535143_2536205_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
AZW64815.1|2536246_2537299_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZW64816.1|2537314_2537617_-	hypothetical protein	NA	NA	NA	NA	NA
AZW64817.1|2537758_2538709_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64818.1|2538887_2540582_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZW64819.1|2540578_2541664_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
AZW64820.1|2541711_2542611_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64821.1|2542621_2543266_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AZW64822.1|2544287_2547530_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
AZW64823.1|2547540_2548638_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
AZW64824.1|2548900_2549884_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
AZW64825.1|2549982_2550933_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64826.1|2551031_2551982_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64827.1|2551991_2552681_-	VIT family protein	NA	NA	NA	NA	NA
AZW64828.1|2552740_2553178_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZW64829.1|2553223_2554117_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZW64830.1|2554266_2555217_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64831.1|2555213_2556386_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZW64832.1|2556382_2557537_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW64833.1|2557733_2558084_-	RnfH family protein	NA	NA	NA	NA	NA
AZW64834.1|2558073_2558508_-	ubiquinone-binding protein	NA	NA	NA	NA	NA
AZW64835.1|2558524_2559475_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	2605568	2672086	4104318	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
AZW64878.1|2605568_2606519_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64879.1|2606888_2607461_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
AZW64880.1|2607463_2608474_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
AZW64881.1|2608466_2608967_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
AZW64882.1|2608977_2609319_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
AZW64883.1|2609330_2610122_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA	NA
AZW64884.1|2610138_2610408_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA	NA
AZW64885.1|2610430_2611219_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
AZW66285.1|2611265_2612282_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW64886.1|2612498_2613941_-	PAS domain S-box protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
AZW64887.1|2614119_2615739_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
AZW64888.1|2615859_2617680_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
AZW64889.1|2617758_2619291_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
AZW64890.1|2619324_2620971_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
AZW64891.1|2621040_2622063_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
AZW64892.1|2622080_2623214_-	flagellar biosynthesis protein FlgI	NA	NA	NA	NA	NA
AZW64893.1|2623216_2623906_-	flagellar L-ring protein	NA	NA	NA	NA	NA
AZW64894.1|2623905_2624691_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
AZW64895.1|2624734_2625499_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
AZW64896.1|2625537_2626959_-	flagellar hook protein FlgE	NA	NA	NA	NA	NA
AZW64897.1|2627024_2627729_-	flagellar basal body rod modification protein	NA	NA	NA	NA	NA
AZW64898.1|2627776_2628196_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
AZW64899.1|2628208_2628616_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
AZW66286.1|2628799_2629510_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
AZW64900.1|2629636_2629927_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
AZW64901.1|2629944_2630427_+	flagellar protein FlgN	NA	NA	NA	NA	NA
AZW64902.1|2634932_2636087_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
AZW66287.1|2636410_2637427_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW64903.1|2637673_2638462_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW64904.1|2638528_2639209_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW64905.1|2639205_2639976_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
AZW64906.1|2640074_2641025_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64907.1|2641080_2641998_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
AZW64908.1|2642008_2643187_-	mandelate racemase	NA	NA	NA	NA	NA
AZW64909.1|2643206_2644202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64910.1|2645790_2646399_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZW64911.1|2646386_2647427_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZW64912.1|2647444_2648407_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64913.1|2648403_2649597_-	CoA transferase	NA	NA	NA	NA	NA
AZW64914.1|2649593_2650391_-	citryl-CoA lyase	NA	NA	NA	NA	NA
AZW64915.1|2650416_2651403_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW64916.1|2651421_2653461_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
AZW66288.1|2653662_2654343_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64917.1|2654356_2655268_-	CoA ester lyase	NA	NA	NA	NA	NA
AZW64918.1|2655264_2655843_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW64919.1|2655981_2656887_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64920.1|2656894_2660314_+	nuclease	NA	NA	NA	NA	NA
AZW64921.1|2660301_2662902_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
AZW64922.1|2663857_2664490_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AZW64923.1|2664883_2665642_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64924.1|2665638_2666841_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZW64925.1|2667028_2667979_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW64926.1|2668886_2670032_+	DUF3182 domain-containing protein	NA	NA	NA	NA	NA
AZW66289.1|2670051_2670774_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW64927.1|2670890_2671070_+	hypothetical protein	NA	NA	NA	NA	NA
AZW64928.1|2671135_2672086_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	2876198	2957475	4104318	transposase,tRNA	Planktothrix_phage(16.67%)	59	NA	NA
AZW65093.1|2876198_2877149_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65094.1|2877145_2878048_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65095.1|2878135_2878894_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW65096.1|2878906_2880055_-	cell division protein ZapE	NA	NA	NA	NA	NA
AZW65097.1|2880095_2881523_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
AZW65098.1|2881752_2882967_-	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
AZW65099.1|2883012_2885883_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
AZW65100.1|2888293_2888782_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZW65101.1|2888907_2891604_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
AZW65102.1|2891758_2894041_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZW65103.1|2894205_2894838_+	fimbrial protein	NA	NA	NA	NA	NA
AZW65104.1|2894936_2895887_+|transposase	IS481 family transposase IS481v2	transposase	NA	NA	NA	NA
AZW65105.1|2895933_2896488_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
AZW65106.1|2896555_2897401_-	PHP domain-containing protein	NA	NA	NA	NA	NA
AZW65107.1|2897470_2898439_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW65108.1|2898438_2900235_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65109.1|2902134_2906061_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZW65110.1|2906351_2906528_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65111.1|2906796_2910027_-	autotransporter SphB3	NA	NA	NA	NA	NA
AZW65112.1|2910308_2911136_-	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZW65113.1|2911169_2911865_-	lipoprotein-releasing system ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
AZW65114.1|2911857_2913138_-	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA	NA
AZW65115.1|2913147_2914125_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66304.1|2914106_2915807_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
AZW65116.1|2915909_2917013_+	peptide chain release factor 2	NA	NA	NA	NA	NA
AZW65117.1|2917043_2917799_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZW65118.1|2917805_2919326_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
AZW65119.1|2919368_2919671_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65120.1|2919667_2920300_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65121.1|2920378_2922244_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AZW65122.1|2922240_2923056_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AZW65123.1|2923063_2924179_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW65124.1|2925083_2925962_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW65125.1|2925961_2926786_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AZW65126.1|2926953_2927904_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65127.1|2928086_2930966_+	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AZW65128.1|2930947_2931724_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW65129.1|2931816_2933280_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AZW65130.1|2933276_2933648_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AZW65131.1|2933665_2934979_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65132.1|2935015_2935474_+	CBS domain-containing protein	NA	NA	NA	NA	NA
AZW65133.1|2935586_2936537_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65134.1|2936533_2937547_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZW65135.1|2937686_2938673_+	homoserine kinase	NA	NA	NA	NA	NA
AZW65136.1|2938716_2939517_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65137.1|2940319_2941270_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65138.1|2941421_2942024_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65139.1|2942042_2942675_+	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA	NA
AZW65140.1|2942912_2944799_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZW65141.1|2944817_2945660_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZW65142.1|2945656_2947015_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZW65143.1|2947235_2948030_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZW65144.1|2948260_2949754_-	exopolyphosphatase	NA	NA	NA	NA	NA
AZW65145.1|2949989_2952071_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZW65146.1|2952265_2953306_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZW65147.1|2953440_2954457_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZW65148.1|2954478_2955336_+	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZW66305.1|2955380_2956157_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZW65149.1|2956524_2957475_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	2966543	3015481	4104318	transposase,tRNA,holin	uncultured_Mediterranean_phage(37.5%)	45	NA	NA
AZW65157.1|2966543_2966957_-|holin	phage holin family protein	holin	NA	NA	NA	NA
AZW65158.1|2966997_2967315_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AZW65159.1|2967399_2968116_-	hypothetical protein	NA	NA	NA	NA	NA
AZW66306.1|2968379_2969801_+	siroheme synthase	NA	NA	NA	NA	NA
AZW65160.1|2969867_2972615_-	pertactin autotransporter	NA	NA	NA	NA	NA
AZW66307.1|2972947_2973964_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW66308.1|2974299_2974941_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZW65161.1|2975031_2976468_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZW65162.1|2976625_2977699_+|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AZW65163.1|2977695_2978832_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZW65164.1|2978976_2979321_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZW65165.1|2979387_2981268_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
AZW65166.1|2981317_2982253_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZW66309.1|2982585_2983602_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW65167.1|2984539_2985967_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZW65168.1|2985963_2986986_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
AZW65169.1|2986975_2987449_+	endoribonuclease YbeY	NA	NA	NA	NA	NA
AZW65170.1|2987574_2988477_+	transporter associated domain protein	NA	NA	NA	NA	NA
AZW65171.1|2988473_2990117_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AZW66310.1|2990113_2991121_-	aldo/keto reductase	NA	NA	NA	NA	NA
AZW66311.1|2991951_2992968_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW65172.1|2993067_2993700_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZW65173.1|2993708_2994098_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZW65174.1|2994150_2995203_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZW65175.1|2996066_2997773_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZW65176.1|2997846_2998347_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZW65177.1|2998361_3000419_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZW65178.1|3000445_3000739_-	response regulator	NA	NA	NA	NA	NA
AZW65179.1|3000840_3001788_-	motility protein MotB	NA	NA	NA	NA	NA
AZW65180.1|3001800_3002676_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZW65181.1|3002796_3003357_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZW65182.1|3003391_3003715_-	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZW65183.1|3004150_3004888_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZW65184.1|3005186_3006137_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65185.1|3006380_3006644_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZW65186.1|3006717_3006999_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65187.1|3007015_3007876_-	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZW65188.1|3007872_3008208_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65189.1|3008261_3008912_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZW65190.1|3010592_3011537_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65191.1|3011582_3011900_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65192.1|3011902_3012841_-	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZW65193.1|3013018_3013504_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZW65194.1|3013522_3014071_+	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZW65195.1|3014347_3015481_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	3027088	3099582	4104318	transposase	Bacillus_virus(16.67%)	59	NA	NA
AZW65204.1|3027088_3028039_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65205.1|3028081_3029257_+	flagellin FliC	NA	NA	NA	NA	NA
AZW65206.1|3029478_3031269_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AZW65207.1|3031281_3032943_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AZW65208.1|3032955_3035661_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AZW65209.1|3035953_3037708_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AZW65210.1|3037704_3038331_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW65211.1|3038327_3039179_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AZW65212.1|3039254_3041369_+	M3 family peptidase	NA	NA	NA	NA	NA
AZW65213.1|3041519_3042170_+	SCO family protein	NA	NA	NA	NA	NA
AZW65214.1|3042315_3042567_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZW65215.1|3042636_3044019_-	multidrug transporter	NA	NA	NA	NA	NA
AZW65216.1|3044015_3047195_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZW66313.1|3048002_3048920_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65217.1|3048971_3049703_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AZW65218.1|3049762_3050335_+	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AZW66314.1|3051843_3052860_+|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZW65219.1|3052997_3054047_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AZW65220.1|3054151_3055102_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65221.1|3055197_3055923_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
AZW65222.1|3056133_3056514_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
AZW65223.1|3056819_3057692_+	multidrug DMT transporter permease	NA	NA	NA	NA	NA
AZW65224.1|3057699_3058080_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65225.1|3058233_3059508_-	radical SAM protein	NA	NA	NA	NA	NA
AZW66315.1|3060995_3061904_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
AZW65226.1|3062701_3063766_-	sulfate/thiosulfate import ATP-binding protein CysA	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
AZW65227.1|3065602_3066637_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW65228.1|3066826_3067468_-	peroxiredoxin	NA	NA	NA	NA	NA
AZW65229.1|3067550_3069377_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW65230.1|3069620_3070550_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
AZW65231.1|3070549_3071299_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
AZW65232.1|3071370_3072285_-	deacetylase	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
AZW65233.1|3072304_3073450_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AZW65234.1|3073510_3074422_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
AZW65235.1|3074502_3075453_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65236.1|3075551_3076136_-	DUF655 domain-containing protein	NA	NA	NA	NA	NA
AZW65237.1|3076170_3077160_-	ADP-L-glycero-D-mannoheptose-6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZW65238.1|3077156_3078098_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZW65239.1|3078094_3079315_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZW65240.1|3079357_3079672_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AZW65241.1|3079863_3080223_-	integration host factor subunit beta	NA	NA	NA	NA	NA
AZW65242.1|3080224_3081955_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZW65243.1|3082127_3082799_-	cytidylate kinase	NA	NA	NA	NA	NA
AZW65244.1|3082813_3084142_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZW65245.1|3084138_3085038_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AZW65246.1|3085124_3086210_-	prephenate dehydratase	NA	NA	NA	NA	NA
AZW65247.1|3086202_3087336_-	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AZW65248.1|3087335_3090017_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZW65249.1|3090387_3090969_+	OmpA family protein	NA	NA	NA	NA	NA
AZW65250.1|3091046_3091820_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AZW65251.1|3091816_3092494_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZW65252.1|3092709_3093891_+	MFS transporter	NA	NA	NA	NA	NA
AZW65253.1|3094367_3094625_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65254.1|3094663_3094846_+	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZW65255.1|3094875_3095826_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66316.1|3095955_3096348_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZW65256.1|3096624_3097536_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AZW65257.1|3097660_3098635_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW65258.1|3098631_3099582_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	3113089	3166607	4104318	transposase,holin	Bacillus_phage(33.33%)	46	NA	NA
AZW65269.1|3113089_3114040_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65270.1|3114152_3114404_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65271.1|3114597_3114813_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65272.1|3114909_3116028_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZW65273.1|3116147_3116360_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65274.1|3116519_3116741_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65275.1|3116793_3117744_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65276.1|3118920_3120291_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AZW65277.1|3120323_3121115_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65278.1|3121127_3122183_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65279.1|3122208_3123084_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65280.1|3123189_3123438_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65281.1|3123472_3124927_-	carboxylase	NA	NA	NA	NA	NA
AZW65282.1|3124923_3125445_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AZW65283.1|3125473_3126826_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW65284.1|3127049_3129938_-	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
AZW65285.1|3132082_3133384_+	phospholipase	NA	NA	NA	NA	NA
AZW65286.1|3133398_3134115_-	flagellar brake protein	NA	NA	NA	NA	NA
AZW65287.1|3134396_3135077_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AZW65288.1|3135088_3135256_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65289.1|3135364_3135517_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65290.1|3135604_3136264_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AZW65291.1|3136644_3138495_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AZW65292.1|3138491_3139442_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65293.1|3140605_3142321_+	acetolactate synthase, large subunit, biosynthetic type	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
AZW65294.1|3142331_3142823_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AZW65295.1|3142895_3143912_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AZW65296.1|3144079_3144859_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AZW65297.1|3144877_3145405_-	lipoprotein	NA	NA	NA	NA	NA
AZW65298.1|3145403_3145610_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65299.1|3145698_3145968_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
AZW65300.1|3146058_3148218_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
AZW65301.1|3148338_3149058_+	lipoprotein	NA	NA	NA	NA	NA
AZW65302.1|3149054_3150005_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65303.1|3150145_3151363_+	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZW65304.1|3151356_3151968_-	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZW65305.1|3152601_3153579_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZW65306.1|3153722_3154469_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZW65307.1|3154490_3154937_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZW65308.1|3155724_3157956_+|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZW65309.1|3157978_3158779_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65310.1|3159060_3160293_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZW65311.1|3160403_3161393_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW65312.1|3161423_3162812_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW65313.1|3164410_3165394_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW66318.1|3165590_3166607_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	3231065	3304227	4104318	transposase	Klosneuvirus(16.67%)	59	NA	NA
AZW65366.1|3231065_3232016_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65367.1|3232012_3233032_-	fructose 1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
AZW65368.1|3233041_3235750_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
AZW65369.1|3235897_3236554_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZW65370.1|3236652_3237603_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65371.1|3237708_3238644_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AZW65372.1|3238843_3240538_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZW65373.1|3240572_3241499_+	VOC family protein	NA	NA	NA	NA	NA
AZW66322.1|3241567_3242665_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65374.1|3242683_3243547_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
AZW65375.1|3243558_3244341_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW65376.1|3244337_3245456_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
AZW65377.1|3245452_3246985_+	long-chain fatty acid--CoA ligase	NA	NA	NA	NA	NA
AZW65378.1|3247025_3248033_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
AZW65379.1|3248177_3248900_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65380.1|3248915_3249938_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
AZW65381.1|3250254_3250989_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65382.1|3251073_3252819_+	acetolactate synthase catalytic subunit	NA	NA	NA	NA	NA
AZW65383.1|3252815_3253568_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW65384.1|3253612_3254569_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW65385.1|3254657_3255224_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65386.1|3255231_3256092_-	aminotransferase	NA	NA	NA	NA	NA
AZW65387.1|3256121_3256865_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.5e-32
AZW65388.1|3256881_3257565_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW65389.1|3258402_3259317_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW65390.1|3259381_3260290_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65391.1|3260380_3261805_-	protein CyaE	NA	NA	NA	NA	NA
AZW65392.1|3261806_3263129_-	protein CyaD	NA	NA	NA	NA	NA
AZW65393.1|3263125_3265264_-	cyclolysin secretion/processing ATP-binding protein CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
AZW65394.1|3265341_3270462_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
AZW66323.1|3270648_3270828_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65395.1|3270910_3271498_+	cyclolysin-activating lysine-acyltransferase CyaC	NA	NA	NA	NA	NA
AZW65396.1|3271513_3272995_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZW65397.1|3273049_3274903_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65398.1|3275165_3276503_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZW65399.1|3276537_3278535_-	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZW65400.1|3278552_3280601_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZW65401.1|3280731_3281598_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW65402.1|3281866_3282832_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
AZW65403.1|3282946_3284095_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AZW65404.1|3284519_3284831_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
AZW65405.1|3284864_3285125_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
AZW65406.1|3285274_3286408_+	GTPase ObgE	NA	NA	NA	NA	NA
AZW65407.1|3286478_3287615_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
AZW65408.1|3287780_3288575_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW65409.1|3288637_3289081_+	transcriptional regulator	NA	NA	NA	NA	NA
AZW65410.1|3289196_3290147_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65411.1|3290133_3290322_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65412.1|3290269_3290677_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZW65413.1|3290749_3292945_+	DNA methylase	NA	NA	NA	NA	NA
AZW65414.1|3293166_3294117_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65415.1|3294076_3294601_-	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZW65416.1|3294732_3295704_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66324.1|3295823_3298268_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZW65417.1|3298283_3298874_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZW65418.1|3299117_3300068_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65419.1|3300225_3301491_-	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AZW65420.1|3301524_3302622_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZW65421.1|3303276_3304227_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	3315514	3415627	4104318	transposase,tRNA,terminase,tail	uncultured_Caudovirales_phage(13.79%)	109	NA	NA
AZW65432.1|3315514_3316465_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65433.1|3317196_3317574_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
AZW65434.1|3317558_3318260_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65435.1|3318403_3319096_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
AZW65436.1|3319095_3320199_-	aminoglycoside phosphotransferase	NA	NA	NA	NA	NA
AZW65437.1|3320308_3322681_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
AZW65438.1|3322677_3324237_+	chaperone SurA	NA	NA	NA	NA	NA
AZW65439.1|3324261_3325059_+	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA	NA
AZW65440.1|3325090_3326236_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
AZW65441.1|3326340_3327783_+	pyruvate kinase	NA	NA	NA	NA	NA
AZW66325.1|3327785_3328874_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65442.1|3331152_3332103_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65443.1|3332089_3332308_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65444.1|3333232_3333790_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW65445.1|3333765_3334116_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65446.1|3334284_3335079_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZW65447.1|3335075_3336125_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AZW65448.1|3336124_3336814_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZW65449.1|3336900_3337398_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AZW65450.1|3337429_3338746_-	protein TolB	NA	NA	NA	NA	NA
AZW65451.1|3338762_3339737_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AZW65452.1|3339773_3340232_-	protein TolR	NA	NA	NA	NA	NA
AZW65453.1|3340231_3340912_-	protein TolQ	NA	NA	NA	NA	NA
AZW65454.1|3340914_3341343_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZW65455.1|3341395_3343126_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZW65456.1|3343191_3343764_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZW65457.1|3343744_3344431_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW65458.1|3344786_3345458_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZW65459.1|3345464_3345665_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65460.1|3346007_3346289_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65461.1|3346285_3346819_-	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AZW65462.1|3346800_3347352_-	lysozyme	NA	NA	NA	NA	NA
AZW65463.1|3347330_3347573_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65464.1|3347577_3348390_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65465.1|3348389_3348653_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65466.1|3348871_3349288_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65467.1|3349292_3353249_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AZW65468.1|3353241_3353631_-	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZW65469.1|3353627_3354161_-	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZW65470.1|3354228_3354588_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65471.1|3354597_3357210_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZW65472.1|3357235_3357526_-	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZW65473.1|3357543_3357873_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZW65474.1|3357882_3358401_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZW65475.1|3358655_3359156_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZW65476.1|3359163_3359586_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65477.1|3359582_3359981_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZW65478.1|3359977_3360373_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZW65479.1|3360372_3360573_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65480.1|3360574_3361057_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZW65481.1|3361119_3361371_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65482.1|3361380_3362028_-	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZW65483.1|3362045_3362996_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65484.1|3363424_3364027_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZW65485.1|3364149_3364392_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZW66326.1|3364397_3365453_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZW65486.1|3365481_3366900_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZW65487.1|3366902_3368180_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZW65488.1|3368166_3368616_-|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZW65489.1|3369291_3370242_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65490.1|3370259_3370481_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65491.1|3370495_3371194_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65492.1|3371186_3371507_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66327.1|3371986_3372598_+	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZW65493.1|3372663_3372876_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65494.1|3373127_3374078_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65495.1|3374176_3375250_-	hypothetical protein	NA	NA	NA	NA	NA
AZW65496.1|3375417_3376212_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW65497.1|3376251_3376776_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AZW65498.1|3376768_3378511_-	sulfite reductase	NA	NA	NA	NA	NA
AZW65499.1|3378720_3379479_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZW65500.1|3379481_3380189_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZW65501.1|3380205_3381087_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW65502.1|3381097_3381856_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW66328.1|3381824_3382580_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65503.1|3382649_3384068_+	amidase	NA	NA	NA	NA	NA
AZW65504.1|3384089_3384740_-	carbonic anhydrase	NA	NA	NA	NA	NA
AZW65505.1|3384873_3385209_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
AZW65506.1|3385297_3386248_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65507.1|3386324_3388145_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZW65508.1|3388149_3389223_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZW65509.1|3389345_3390314_+	threonine/serine dehydratase	NA	NA	NA	NA	NA
AZW65510.1|3390387_3391299_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AZW65511.1|3391317_3391890_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AZW65512.1|3391970_3392519_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZW65513.1|3392518_3394108_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZW65514.1|3394177_3394417_-	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZW65515.1|3394457_3395489_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZW65516.1|3395548_3396730_-	monooxygenase	NA	NA	NA	NA	NA
AZW65517.1|3396826_3397279_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65518.1|3397288_3398629_-	peptidase M24 family protein	NA	NA	NA	NA	NA
AZW65519.1|3398945_3399983_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65520.1|3400364_3400724_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66329.1|3400807_3401749_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65521.1|3401823_3402774_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW65522.1|3403067_3404162_+	porin	NA	NA	NA	NA	NA
AZW65523.1|3404243_3405125_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AZW65524.1|3405146_3405986_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZW65525.1|3406061_3407579_+	peptidase	NA	NA	NA	NA	NA
AZW65526.1|3407675_3408776_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW65527.1|3408792_3409215_-	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZW65528.1|3409237_3409450_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AZW65529.1|3409496_3410417_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AZW66330.1|3410680_3411349_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW65530.1|3411351_3411681_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
AZW65531.1|3411887_3413321_+	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZW65532.1|3413332_3413716_-	thioredoxin	NA	NA	NA	NA	NA
AZW65533.1|3413777_3414578_+	hypothetical protein	NA	NA	NA	NA	NA
AZW65534.1|3414676_3415627_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP025342	Bordetella pertussis strain F580 chromosome, complete genome	4104318	4026489	4086679	4104318	transposase	Planktothrix_phage(28.57%)	51	NA	NA
AZW66085.1|4026489_4027440_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66086.1|4027609_4028836_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
AZW66087.1|4029035_4029902_+	DUF815 domain-containing protein	NA	NA	NA	NA	NA
AZW66088.1|4029894_4030857_+	NUDIX domain-containing protein	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
AZW66089.1|4030957_4031908_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66090.1|4032006_4032957_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66091.1|4032953_4034447_-	RND transporter	NA	NA	NA	NA	NA
AZW66092.1|4034443_4037551_-	multidrug transporter subunit MdtC	NA	NA	NA	NA	NA
AZW66093.1|4037547_4040616_-	multidrug transporter subunit MdtB	NA	NA	NA	NA	NA
AZW66094.1|4040612_4041863_-	multidrug transporter subunit MdtA	NA	NA	NA	NA	NA
AZW66095.1|4042043_4042805_-	cell division protein ZapD	NA	NA	NA	NA	NA
AZW66096.1|4042837_4043488_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AZW66097.1|4043490_4044330_-	prepilin peptidase	NA	NA	NA	NA	NA
AZW66098.1|4044570_4045314_+	hypothetical protein	NA	NA	NA	NA	NA
AZW66099.1|4045396_4045744_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZW66100.1|4045841_4046684_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZW66101.1|4046728_4047616_-	segregation/condensation protein A	NA	NA	NA	NA	NA
AZW66102.1|4047642_4047831_-	DUF3460 domain-containing protein	NA	NA	NA	NA	NA
AZW66103.1|4047928_4049386_+	MFS transporter	NA	NA	NA	NA	NA
AZW66104.1|4049372_4050899_+	glycerol kinase	NA	NA	NA	NA	NA
AZW66105.1|4050917_4051385_-	hypothetical protein	NA	NA	NA	NA	NA
AZW66106.1|4051384_4052407_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW66107.1|4052527_4053268_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
AZW66108.1|4053322_4054423_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW66109.1|4054424_4055615_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW66110.1|4055734_4056751_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
AZW66111.1|4057069_4057741_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
AZW66112.1|4057737_4058646_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW66113.1|4058857_4059505_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AZW66114.1|4063356_4064433_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AZW66115.1|4064443_4065253_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW66116.1|4065342_4066116_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZW66117.1|4066298_4067249_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66355.1|4067137_4068160_+	CoA transferase	NA	NA	NA	NA	NA
AZW66118.1|4068149_4069304_+	CoA transferase	NA	NA	NA	NA	NA
AZW66119.1|4069343_4070756_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW66120.1|4070778_4071747_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW66121.1|4071748_4072573_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZW66122.1|4072569_4073331_+	nitrobenzoate reductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
AZW66123.1|4073411_4074098_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW66124.1|4074271_4075279_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
AZW66125.1|4075275_4076055_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW66356.1|4076136_4077375_+	CoA transferase	NA	NA	NA	NA	NA
AZW66126.1|4077921_4078872_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW66127.1|4078994_4080443_+	catalase	NA	A0A2K9L0T1	Tupanvirus	40.8	3.2e-106
AZW66128.1|4080503_4081385_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW66129.1|4081381_4082197_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.4	6.1e-30
AZW66130.1|4082198_4083242_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW66131.1|4083285_4084209_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
AZW66132.1|4084338_4085538_-	amidohydrolase	NA	NA	NA	NA	NA
AZW66133.1|4085728_4086679_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
