The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	0	65103	4106548	tRNA,transposase,protease	Natrialba_phage(12.5%)	56	NA	NA
AZX02268.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZX02269.1|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA	NA
AZX02270.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZX02271.1|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX02272.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZX02273.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZX02274.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZX02275.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZX02276.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZX02277.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZX02278.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZX02279.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZX02280.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZX02281.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZX05660.1|20126_20531_-	lipoprotein	NA	NA	NA	NA	NA
AZX02282.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02283.1|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZX02284.1|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX02285.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02286.1|28313_28649_-	CoA transferase	NA	NA	NA	NA	NA
AZX02287.1|28673_29108_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02288.1|29140_30367_-	thiolase family protein	NA	NA	NA	NA	NA
AZX02289.1|30363_30861_-	dehydratase	NA	NA	NA	NA	NA
AZX05661.1|31068_31977_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02290.1|32162_33005_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX02291.1|33047_34469_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX02292.1|34624_35575_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02293.1|35571_36762_-	MFS transporter	NA	NA	NA	NA	NA
AZX02294.1|36948_37923_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZX02295.1|37924_40063_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX02296.1|40059_40599_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZX02297.1|40602_41331_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX02298.1|41317_42211_+	M48 family peptidase	NA	NA	NA	NA	NA
AZX02299.1|42281_42677_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZX02300.1|42686_43217_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZX02301.1|43345_43645_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02302.1|43662_44613_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02303.1|44711_45662_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02304.1|46161_46797_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02305.1|46768_47005_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX02306.1|47132_48026_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02307.1|49195_50443_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZX02308.1|50439_51054_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZX02309.1|51189_52140_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02310.1|52182_53439_+	MFS transporter	NA	NA	NA	NA	NA
AZX02311.1|54670_55405_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZX02312.1|55410_56001_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZX02313.1|56025_56715_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX02314.1|56711_57473_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX02315.1|57552_58452_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX02316.1|58545_59496_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02317.1|60296_61523_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZX02318.1|61522_61942_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX02319.1|62125_63067_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02320.1|63490_64327_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02321.1|64521_65103_-|protease	protease	protease	NA	NA	NA	NA
>prophage 2
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	70133	124170	4106548	tRNA,transposase	Planktothrix_phage(20.0%)	52	NA	NA
AZX02326.1|70133_71084_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02327.1|71177_71492_+|transposase	transposase	transposase	NA	NA	NA	NA
AZX02328.1|72684_74592_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZX02329.1|74753_75374_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX02330.1|75405_75987_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZX02331.1|76075_76327_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05662.1|76328_77078_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02332.1|77276_78686_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZX02333.1|78682_79633_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05663.1|79707_80652_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02334.1|80648_82523_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZX02335.1|83870_84575_-	DUF2837 domain-containing protein	NA	NA	NA	NA	NA
AZX02336.1|84571_85678_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZX02337.1|85939_86533_-	sugar transferase	NA	NA	NA	NA	NA
AZX02338.1|86529_87762_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA	NA
AZX02339.1|87779_89039_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZX02340.1|89062_90151_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZX02341.1|90158_91259_-	aminotransferase DegT	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZX02342.1|91262_91838_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX02343.1|91841_92894_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AZX02344.1|93024_94032_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZX02345.1|94033_95320_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZX02346.1|95336_95492_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02347.1|95516_96320_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AZX02348.1|96316_97183_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZX02349.1|97251_98388_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX02350.1|98387_99227_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZX02351.1|100159_100762_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02352.1|100791_101445_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX02353.1|101577_102834_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AZX02354.1|102836_103781_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZX02355.1|103856_104132_+	DUF493 domain-containing protein	NA	NA	NA	NA	NA
AZX02356.1|104139_104802_+	octanoyltransferase	NA	NA	NA	NA	NA
AZX02357.1|104863_105865_+	lipoyl synthase	NA	NA	NA	NA	NA
AZX02358.1|105879_106428_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AZX02359.1|106485_107382_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZX02360.1|107378_108440_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZX02361.1|108475_109426_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02362.1|110325_111519_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX02363.1|111600_112230_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AZX02364.1|112291_112975_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX02365.1|112984_114667_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX05664.1|114954_115302_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZX02366.1|115392_115710_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02367.1|115992_117009_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX02368.1|117084_117885_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX02369.1|117881_118757_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX02370.1|118767_120060_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX02371.1|120102_121143_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZX02372.1|121248_122070_-	phosphodiesterase	NA	NA	NA	NA	NA
AZX02373.1|122170_123121_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02374.1|123219_124170_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	166991	303594	4106548	tRNA,transposase,protease	Klosneuvirus(10.53%)	116	NA	NA
AZX02406.1|166991_167942_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02407.1|169385_170288_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02408.1|170265_170895_-	LemA family protein	NA	NA	NA	NA	NA
AZX02409.1|171225_172608_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZX02410.1|172641_173271_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZX02411.1|173319_174927_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZX02412.1|174951_175635_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05669.1|175716_176193_-	bacterioferritin	NA	NA	NA	NA	NA
AZX02413.1|178464_178992_+	lipoprotein	NA	NA	NA	NA	NA
AZX02414.1|179083_179899_+	lipoprotein	NA	NA	NA	NA	NA
AZX02415.1|179959_180694_+	sulfurtransferase	NA	NA	NA	NA	NA
AZX02416.1|180731_182810_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZX02417.1|183059_183332_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02418.1|183430_184519_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZX02419.1|184522_186427_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AZX02420.1|186423_190098_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AZX02421.1|190158_190722_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZX02422.1|190729_191152_-	glyoxalase	NA	NA	NA	NA	NA
AZX02423.1|191179_191599_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AZX05670.1|191627_192074_-	N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AZX02424.1|192200_192698_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02425.1|192852_195123_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZX02426.1|195166_196399_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX02427.1|196497_197448_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02428.1|197493_198186_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AZX02429.1|198182_199076_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX02430.1|199470_200571_+	aminomethyltransferase	NA	NA	NA	NA	NA
AZX02431.1|200652_201027_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZX02432.1|201086_203951_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZX02433.1|204095_204836_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02434.1|204905_206117_+	CoA transferase	NA	NA	NA	NA	NA
AZX02435.1|206145_207114_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02436.1|207727_208678_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02437.1|208834_209158_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AZX02438.1|209262_210312_-	cyclase	NA	NA	NA	NA	NA
AZX02439.1|210308_211133_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AZX02440.1|211133_211430_-	YciI family protein	NA	NA	NA	NA	NA
AZX02441.1|211455_211731_-	muconolactone delta-isomerase	NA	NA	NA	NA	NA
AZX02442.1|211787_212432_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX02443.1|212431_213118_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX05671.1|213247_214099_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02444.1|214149_214875_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX02445.1|214906_216256_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZX02446.1|216367_217300_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX02447.1|217757_220553_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZX02448.1|221146_224089_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZX02449.1|224160_224880_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZX02450.1|224918_225467_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZX02451.1|225621_226521_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZX02452.1|226545_227496_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02453.1|227713_228409_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02454.1|228425_229838_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZX02455.1|229950_231381_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AZX02456.1|231422_233336_-	phosphomethylpyrimidine synthase	NA	NA	NA	NA	NA
AZX02457.1|233654_234221_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
AZX02458.1|234311_235313_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
AZX02459.1|235427_236378_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02460.1|236464_237415_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02461.1|237411_238362_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02462.1|238460_239258_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX02463.1|240207_240618_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZX02464.1|241639_242383_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02465.1|242426_243470_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX02466.1|243640_245743_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02467.1|247153_248110_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02468.1|248128_248620_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZX02469.1|248616_249972_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZX02470.1|249972_250671_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZX02471.1|250667_251369_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZX02472.1|251621_252671_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZX02473.1|252776_253718_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZX02474.1|253714_255604_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZX02475.1|255690_256329_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05672.1|256471_257716_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZX02476.1|257787_258324_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZX02477.1|258475_259867_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZX02478.1|259883_260864_-	AEC family transporter	NA	NA	NA	NA	NA
AZX02479.1|260999_261983_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZX02480.1|262047_262947_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02481.1|263053_264808_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX02482.1|264815_265940_-	CoA transferase	NA	NA	NA	NA	NA
AZX02483.1|265953_266934_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02484.1|267664_268615_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02485.1|269174_269720_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02486.1|269803_271423_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX02487.1|271438_272593_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZX02488.1|272606_272732_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AZX02489.1|272728_274480_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZX02490.1|274476_276156_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZX02491.1|276191_276767_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AZX02492.1|277909_278188_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX02493.1|279231_280182_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02494.1|280168_280384_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02495.1|280459_280621_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZX02496.1|280628_280769_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02497.1|281287_281737_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZX02498.1|281746_282358_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX02499.1|282516_283371_-	cytochrome c1	NA	NA	NA	NA	NA
AZX02500.1|283390_284773_-	cytochrome b	NA	NA	NA	NA	NA
AZX02501.1|284837_285479_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZX02502.1|285618_286077_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AZX02503.1|286101_286878_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZX05673.1|286931_288068_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZX02504.1|288064_289015_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02505.1|289113_289740_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZX02506.1|289762_290689_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
AZX02507.1|290697_292284_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX02508.1|292280_293285_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
AZX02509.1|293484_294345_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX02510.1|294376_295378_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
AZX02511.1|295448_296258_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX02512.1|296335_298195_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZX02513.1|298323_299526_-	MFS transporter	NA	NA	NA	NA	NA
AZX02514.1|299639_300521_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02515.1|302023_302584_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
AZX02516.1|302643_303594_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	357009	416477	4106548	tRNA,transposase	Streptococcus_phage(50.0%)	56	NA	NA
AZX02568.1|357009_357960_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02569.1|358071_358794_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02570.1|358892_359636_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AZX02571.1|359866_361375_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02572.1|361494_362226_+	iron-containing redox enzyme family protein	NA	NA	NA	NA	NA
AZX02573.1|362270_363731_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AZX02574.1|363755_364235_+	heme-binding protein	NA	NA	NA	NA	NA
AZX02575.1|364253_365264_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
AZX02576.1|365478_366219_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX02577.1|366410_367436_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02578.1|367395_368346_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02579.1|369394_370033_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
AZX02580.1|370069_371464_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
AZX02581.1|371835_372624_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	25.7	1.2e-19
AZX02582.1|372728_373436_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX02583.1|373549_375004_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B	tRNA	NA	NA	NA	NA
AZX02584.1|375006_376545_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A	tRNA	NA	NA	NA	NA
AZX02585.1|376547_376856_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C	tRNA	NA	NA	NA	NA
AZX02586.1|377086_378130_+	rod shape-determining protein	NA	NA	NA	NA	NA
AZX02587.1|378218_379103_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AZX02588.1|379089_379653_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AZX02589.1|379666_381619_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
AZX02590.1|381615_382752_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
AZX02591.1|382777_383833_-	lactate dehydrogenase	NA	NA	NA	NA	NA
AZX02592.1|383843_385337_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02593.1|385549_386125_-	nucleoid occlusion factor SlmA	NA	NA	NA	NA	NA
AZX02594.1|386174_386921_-	pyrimidine 5'-nucleotidase	NA	NA	NA	NA	NA
AZX02595.1|386920_387823_-	acetylglutamate kinase	NA	NA	NA	NA	NA
AZX02596.1|388084_388873_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX02597.1|389013_389505_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
AZX02598.1|389501_390245_-	phospholipid-binding protein	NA	NA	NA	NA	NA
AZX02599.1|390241_390844_-	phosphoheptose isomerase	NA	A0A067XQR2	Caulobacter_phage	34.8	5.7e-17
AZX02600.1|390843_391320_-	YraN family protein	NA	NA	NA	NA	NA
AZX02601.1|391444_392383_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	NA	NA	NA	NA
AZX02602.1|392379_392952_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.5	3.2e-25
AZX02603.1|392948_393899_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02604.1|393997_394948_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02605.1|395084_396002_+	reductase	NA	NA	NA	NA	NA
AZX02606.1|395998_396247_+	glutaredoxin family protein	NA	NA	NA	NA	NA
AZX02607.1|396243_397449_+	CoA transferase	NA	NA	NA	NA	NA
AZX02608.1|397521_398517_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02609.1|398539_399760_-	CoA transferase	NA	NA	NA	NA	NA
AZX02610.1|399756_400401_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02611.1|402131_402941_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05679.1|403158_404199_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
AZX02612.1|404297_405281_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02613.1|405207_405909_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02614.1|405957_406728_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX02615.1|406724_407966_-	CoA transferase	NA	NA	NA	NA	NA
AZX02616.1|408070_409777_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZX02617.1|409773_410670_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02618.1|410710_412300_-	sulfurtransferase	NA	NA	NA	NA	NA
AZX02619.1|412349_413342_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02620.1|413410_414010_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05680.1|414470_415448_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02621.1|415526_416477_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	424288	479262	4106548	transposase	Bradyrhizobium_phage(20.0%)	44	NA	NA
AZX02630.1|424288_425266_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02631.1|425461_426667_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AZX02632.1|426663_428175_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX05682.1|428190_429504_-	short-chain fatty acids transporter	NA	NA	NA	NA	NA
AZX02633.1|429694_429874_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02634.1|430283_431018_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AZX02635.1|433462_434413_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02636.1|434544_434943_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
AZX02637.1|435353_435824_-	universal stress protein	NA	NA	NA	NA	NA
AZX02638.1|435912_436257_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
AZX02639.1|436356_437757_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX02640.1|439545_440064_-	methyltransferase	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
AZX02641.1|440174_440930_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
AZX02642.1|441125_442358_+	CoA transferase	NA	NA	NA	NA	NA
AZX02643.1|442350_443136_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX02644.1|443202_444174_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02645.1|444184_445162_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02646.1|445287_446460_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX02647.1|446486_447515_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX02648.1|447580_448774_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX02649.1|450555_451506_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02650.1|451604_452555_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02651.1|452653_453559_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02652.1|453734_453938_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.2	5.8e-14
AZX02653.1|454448_454889_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02654.1|454918_455554_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02655.1|455663_457304_-	1-pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA	NA
AZX02656.1|457300_458764_-	Short chain fatty acid transporter	NA	NA	NA	NA	NA
AZX02657.1|458794_462181_-	molybdopterin oxidoreductase	NA	NA	NA	NA	NA
AZX02658.1|462322_462727_-	RidA family protein	NA	NA	NA	NA	NA
AZX02659.1|462870_463857_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02660.1|463843_464125_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02661.1|464870_466103_-	2-methylfumaryl-CoA isomerase	NA	NA	NA	NA	NA
AZX05683.1|466102_466576_-	MaoC family dehydratase	NA	NA	NA	NA	NA
AZX02662.1|466728_467691_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02663.1|467668_468922_-	CoA transferase	NA	NA	NA	NA	NA
AZX02664.1|469043_469994_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02665.1|469990_470653_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
AZX02666.1|470660_471620_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
AZX02667.1|471776_472448_-	hydrolase	NA	NA	NA	NA	NA
AZX02668.1|472450_473416_-	23S rRNA pseudouridine(955/2504/2580) synthase	NA	NA	NA	NA	NA
AZX02669.1|473923_477052_+	ribonuclease E/G	NA	NA	NA	NA	NA
AZX02670.1|477127_478195_-	choloylglycine hydrolase	NA	NA	NA	NA	NA
AZX02671.1|478311_479262_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	623942	724406	4106548	tRNA,tail,transposase,terminase	uncultured_Caudovirales_phage(13.79%)	111	NA	NA
AZX02800.1|623942_624893_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02801.1|625591_625975_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02802.1|626032_626635_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
AZX05688.1|626652_627054_-	DoxX family protein	NA	NA	NA	NA	NA
AZX02803.1|627187_628081_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02804.1|628077_628659_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AZX02805.1|629453_630188_+	arginyltransferase	NA	NA	NA	NA	NA
AZX02806.1|630228_631278_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AZX02807.1|631425_632004_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AZX02808.1|632390_633368_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
AZX02809.1|633461_637856_-	dermonecrotic toxin	NA	NA	NA	NA	NA
AZX02810.1|638056_638905_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX02811.1|639063_639876_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
AZX02812.1|639931_640882_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02813.1|640980_641781_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02814.1|641842_642226_+	thioredoxin	NA	NA	NA	NA	NA
AZX02815.1|642237_643671_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZX02816.1|643877_644207_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
AZX05689.1|644209_644878_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX02817.1|645141_646062_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AZX02818.1|646108_646321_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AZX02819.1|646343_646766_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZX02820.1|646782_647883_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX02821.1|647979_649497_-	peptidase	NA	NA	NA	NA	NA
AZX02822.1|649572_650412_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZX02823.1|650433_651315_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AZX02824.1|651396_652491_-	porin	NA	NA	NA	NA	NA
AZX02825.1|652784_653735_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05690.1|653809_654751_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02826.1|654834_655194_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02827.1|655575_656613_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02828.1|656929_658270_+	peptidase M24 family protein	NA	NA	NA	NA	NA
AZX02829.1|658279_658732_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02830.1|658828_660010_+	monooxygenase	NA	NA	NA	NA	NA
AZX02831.1|660069_661101_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZX02832.1|661141_661381_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX02833.1|661450_663040_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZX02834.1|663039_663588_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZX02835.1|663668_664241_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AZX02836.1|664259_665171_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AZX02837.1|665244_666213_-	threonine/serine dehydratase	NA	NA	NA	NA	NA
AZX02838.1|666335_667409_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZX02839.1|667413_669234_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZX02840.1|669310_670261_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02841.1|670349_670685_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AZX02842.1|670818_671469_+	carbonic anhydrase	NA	NA	NA	NA	NA
AZX02843.1|671490_672909_-	amidase	NA	NA	NA	NA	NA
AZX02844.1|672978_673734_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05691.1|673702_674461_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX02845.1|674471_675353_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX02846.1|675369_676077_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZX02847.1|676079_676838_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZX02848.1|677047_678790_+	sulfite reductase	NA	NA	NA	NA	NA
AZX02849.1|678782_679307_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AZX02850.1|679346_680141_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX02851.1|680308_681382_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02852.1|681480_682431_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02853.1|682682_682895_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05692.1|682960_683572_-	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZX02854.1|684051_684372_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02855.1|684364_685063_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02856.1|685077_685299_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02857.1|685316_686267_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05693.1|686942_687392_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZX02858.1|687378_688656_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZX02859.1|688658_690077_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZX05694.1|690105_691161_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZX02860.1|691166_691409_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZX02861.1|691531_692134_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZX02862.1|692562_693513_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX02863.1|693530_694178_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZX02864.1|694187_694439_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02865.1|694501_694984_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZX02866.1|694985_695186_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02867.1|695185_695581_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZX02868.1|695577_695976_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZX02869.1|695972_696395_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02870.1|696402_696903_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZX02871.1|697157_697676_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZX02872.1|697685_698015_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZX02873.1|698032_698323_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZX02874.1|698348_700961_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZX02875.1|700970_701330_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02876.1|701397_701931_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZX02877.1|701927_702317_+	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZX02878.1|702309_706266_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AZX02879.1|706270_706687_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02880.1|706905_707169_+	hypothetical protein	NA	A0A1B0V3F2	Roseobacter_phage	41.8	7.2e-09
AZX02881.1|707168_707981_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02882.1|707985_708228_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02883.1|708206_708758_+	lysozyme	NA	NA	NA	NA	NA
AZX02884.1|708739_709273_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AZX02885.1|709269_709551_-	hypothetical protein	NA	NA	NA	NA	NA
AZX02886.1|709893_710094_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02887.1|710100_710772_-	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZX02888.1|711127_711814_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX02889.1|711794_712367_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZX02890.1|712432_714163_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZX02891.1|714215_714644_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZX02892.1|714646_715327_+	protein TolQ	NA	NA	NA	NA	NA
AZX02893.1|715326_715785_+	protein TolR	NA	NA	NA	NA	NA
AZX02894.1|715821_716796_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AZX02895.1|716812_718129_+	protein TolB	NA	NA	NA	NA	NA
AZX02896.1|718160_718658_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AZX02897.1|718744_719434_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZX02898.1|719433_720483_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX02899.1|720479_721274_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZX02900.1|721442_721793_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02901.1|721768_722326_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX02902.1|723250_723469_+	hypothetical protein	NA	NA	NA	NA	NA
AZX02903.1|723455_724406_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	858288	907552	4106548	holin,transposase	Vibrio_phage(33.33%)	40	NA	NA
AZX03006.1|858288_859239_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05699.1|859211_859811_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03007.1|859812_860247_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX03008.1|860243_860678_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03009.1|860661_861465_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AZX03010.1|861481_862297_-	DNA repair exonuclease	NA	NA	NA	NA	NA
AZX03011.1|862293_863109_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AZX03012.1|863255_863957_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03013.1|863984_865943_-|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AZX03014.1|866025_866976_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03015.1|867196_867865_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX03016.1|867988_869095_+	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX03017.1|869107_872221_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
AZX03018.1|872217_873711_+	RND transporter	NA	NA	NA	NA	NA
AZX03019.1|873725_874397_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX03020.1|874440_874935_-	azurin	NA	NA	NA	NA	NA
AZX03021.1|875075_875723_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX05700.1|875826_877875_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZX03022.1|877871_879884_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZX03023.1|879909_881244_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX05701.1|881352_882345_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX03024.1|882411_884496_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AZX03025.1|884520_885492_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX03026.1|885620_886622_-	peptidase M14	NA	NA	NA	NA	NA
AZX03027.1|886655_887897_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX03028.1|887977_888901_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
AZX03029.1|888978_889803_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX03030.1|889999_891016_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX03031.1|891212_892196_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX03032.1|893794_895183_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX03033.1|895213_896203_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX03034.1|896313_897546_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX03035.1|897827_898628_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03036.1|898650_900882_-|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZX03037.1|901669_902116_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZX03038.1|902137_902884_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZX03039.1|903027_904005_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZX03040.1|904638_905250_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZX03041.1|905243_906461_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZX03042.1|906601_907552_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	917164	982104	4106548	transposase	Bacillus_phage(18.18%)	60	NA	NA
AZX03051.1|917164_918115_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03052.1|918111_919962_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AZX03053.1|920342_921002_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AZX03054.1|921089_921242_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03055.1|921350_921518_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03056.1|921529_922210_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AZX03057.1|922491_923208_+	flagellar brake protein	NA	NA	NA	NA	NA
AZX03058.1|923222_924524_-	phospholipase	NA	NA	NA	NA	NA
AZX03059.1|926668_929557_+	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
AZX03060.1|929780_931133_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX03061.1|931161_931683_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AZX03062.1|931679_933134_+	carboxylase	NA	NA	NA	NA	NA
AZX03063.1|933168_933417_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03064.1|933522_934398_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03065.1|934423_935479_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03066.1|935491_936283_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03067.1|936315_937686_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AZX03068.1|938862_939813_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03069.1|939865_940087_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03070.1|940246_940459_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03071.1|940578_941697_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZX03072.1|941793_942009_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03073.1|942202_942454_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03074.1|942566_943517_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03075.1|943513_943897_-	ferredoxin	NA	NA	NA	NA	NA
AZX03076.1|943951_945769_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
AZX05703.1|945915_946743_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
AZX03077.1|946788_947769_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZX03078.1|947765_947978_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03079.1|947974_949156_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AZX03080.1|949319_950054_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
AZX03081.1|950055_952668_-	penicillin-binding protein	NA	NA	NA	NA	NA
AZX03082.1|952803_954717_-	S9 family peptidase	NA	NA	NA	NA	NA
AZX03083.1|955332_955743_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX03084.1|955840_956926_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZX03085.1|957024_957975_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03086.1|957971_958946_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX03087.1|959070_959982_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AZX03088.1|960258_960651_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZX03089.1|960780_961731_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03090.1|961760_961943_-	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZX03091.1|961981_962239_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03092.1|962715_963897_-	MFS transporter	NA	NA	NA	NA	NA
AZX03093.1|964112_964790_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX03094.1|964786_965560_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AZX03095.1|965637_966219_-	OmpA family protein	NA	NA	NA	NA	NA
AZX03096.1|966589_969271_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZX03097.1|969270_970404_+	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AZX03098.1|970396_971482_+	prephenate dehydratase	NA	NA	NA	NA	NA
AZX03099.1|971568_972468_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AZX03100.1|972464_973793_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZX03101.1|973807_974479_+	cytidylate kinase	NA	NA	NA	NA	NA
AZX03102.1|974651_976382_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZX03103.1|976383_976743_+	integration host factor subunit beta	NA	NA	NA	NA	NA
AZX03104.1|976934_977249_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AZX03105.1|977291_978512_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZX03106.1|978508_979450_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZX03107.1|979446_980436_+	ADP-L-glycero-D-mannoheptose-6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZX03108.1|980470_981055_+	DUF655 domain-containing protein	NA	NA	NA	NA	NA
AZX03109.1|981153_982104_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	1001504	1074020	4106548	tRNA,transposase	Enterococcus_phage(14.29%)	59	NA	NA
AZX03124.1|1001504_1002455_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03125.1|1002559_1003609_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AZX03126.1|1003746_1004763_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX03127.1|1006271_1006844_-	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AZX03128.1|1006903_1007635_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AZX05705.1|1007686_1008604_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03129.1|1009411_1012591_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX03130.1|1012587_1013970_+	multidrug transporter	NA	NA	NA	NA	NA
AZX03131.1|1014039_1014291_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZX03132.1|1014436_1015087_-	SCO family protein	NA	NA	NA	NA	NA
AZX03133.1|1015237_1017352_-	M3 family peptidase	NA	NA	NA	NA	NA
AZX03134.1|1017427_1018279_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AZX03135.1|1018275_1018902_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX03136.1|1018898_1020653_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AZX03137.1|1020945_1023651_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AZX03138.1|1023663_1025325_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AZX03139.1|1025337_1027128_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AZX03140.1|1027349_1028525_-	flagellin FliC	NA	NA	NA	NA	NA
AZX03141.1|1028567_1029518_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03142.1|1029616_1030357_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AZX03143.1|1030551_1032588_+	transketolase	NA	NA	NA	NA	NA
AZX03144.1|1032605_1033616_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AZX03145.1|1033733_1034927_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
AZX03146.1|1034956_1035730_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX03147.1|1035726_1036917_-	acetate kinase	NA	NA	NA	NA	NA
AZX03148.1|1036942_1037881_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
AZX05706.1|1037877_1040226_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
AZX03149.1|1040380_1041088_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX03150.1|1042534_1043083_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZX03151.1|1043101_1043587_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX03152.1|1043764_1044703_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZX03153.1|1044705_1045023_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03154.1|1045068_1046013_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03155.1|1047693_1048344_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZX03156.1|1048397_1048733_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03157.1|1048729_1049590_+	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZX03158.1|1049606_1049888_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03159.1|1049961_1050225_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZX03160.1|1050468_1051419_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03161.1|1051717_1052455_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZX03162.1|1052890_1053214_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZX03163.1|1053248_1053809_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZX03164.1|1053929_1054805_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZX03165.1|1054817_1055765_+	motility protein MotB	NA	NA	NA	NA	NA
AZX03166.1|1055866_1056160_+	response regulator	NA	NA	NA	NA	NA
AZX03167.1|1056186_1058244_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZX03168.1|1058258_1058759_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZX03169.1|1058832_1060539_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZX03170.1|1061402_1062455_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZX03171.1|1062507_1062897_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZX03172.1|1062905_1063538_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZX03173.1|1063637_1064654_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX05707.1|1065484_1066492_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZX03174.1|1066488_1068132_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AZX03175.1|1068128_1069031_-	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
AZX03176.1|1069156_1069630_-	endoribonuclease YbeY	NA	NA	NA	NA	NA
AZX03177.1|1069619_1070642_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
AZX03178.1|1070638_1072066_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZX03179.1|1073003_1074020_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
>prophage 10
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	1082641	1161668	4106548	holin,transposase,tRNA	Planktothrix_phage(18.18%)	60	NA	NA
AZX03186.1|1082641_1083658_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX03187.1|1083990_1086738_+	pertactin autotransporter	NA	NA	NA	NA	NA
AZX05709.1|1086804_1088226_-	siroheme synthase	NA	NA	NA	NA	NA
AZX03188.1|1088489_1089206_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03189.1|1089290_1089608_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AZX03190.1|1089648_1090062_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX03191.1|1090063_1090423_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03192.1|1090465_1092010_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
AZX03193.1|1092093_1092924_+	transglycosylase	NA	NA	NA	NA	NA
AZX03194.1|1092958_1094113_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AZX03195.1|1094155_1095028_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03196.1|1095144_1097433_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZX03197.1|1098639_1099104_+	barstar family protein 2	NA	NA	NA	NA	NA
AZX03198.1|1099130_1100081_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05710.1|1100448_1101225_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZX03199.1|1101269_1102127_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZX03200.1|1102148_1103165_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZX03201.1|1103299_1104340_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZX03202.1|1104534_1106616_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZX03203.1|1106851_1108345_+	exopolyphosphatase	NA	NA	NA	NA	NA
AZX03204.1|1108575_1109370_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX03205.1|1109590_1110949_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZX03206.1|1110945_1111788_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZX03207.1|1111806_1113693_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZX03208.1|1113930_1114563_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA	NA
AZX03209.1|1114581_1115184_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03210.1|1115335_1116286_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03211.1|1117088_1117889_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03212.1|1117932_1118919_-	homoserine kinase	NA	NA	NA	NA	NA
AZX03213.1|1119058_1120072_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZX03214.1|1120068_1121019_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03215.1|1121131_1121590_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AZX03216.1|1121626_1122940_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03217.1|1122957_1123329_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AZX03218.1|1123325_1124789_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AZX03219.1|1124881_1125658_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX03220.1|1125639_1128519_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AZX03221.1|1129818_1130643_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AZX03222.1|1130642_1131521_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX03223.1|1132425_1133541_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX03224.1|1133548_1134364_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AZX03225.1|1134360_1136226_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AZX03226.1|1136304_1136937_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03227.1|1136933_1137236_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03228.1|1137278_1138799_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
AZX03229.1|1138805_1139561_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX03230.1|1139590_1140695_-	peptide chain release factor 2	NA	NA	NA	NA	NA
AZX05711.1|1140797_1142498_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
AZX03231.1|1142479_1143457_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03232.1|1143466_1144747_+	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA	NA
AZX03233.1|1144739_1145435_+	lipoprotein-releasing system ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
AZX03234.1|1145468_1146296_+	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZX03235.1|1146577_1149808_+	autotransporter SphB3	NA	NA	NA	NA	NA
AZX03236.1|1150076_1150253_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03237.1|1150543_1154470_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZX03238.1|1156369_1158166_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03239.1|1158165_1159134_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX03240.1|1159203_1160049_+	PHP domain-containing protein	NA	NA	NA	NA	NA
AZX03241.1|1160116_1160671_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
AZX03242.1|1160717_1161668_-|transposase	IS481 family transposase IS481v2	transposase	NA	NA	NA	NA
>prophage 11
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	1320045	1385474	4106548	transposase	Planktothrix_phage(33.33%)	55	NA	NA
AZX03368.1|1320045_1320996_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03369.1|1321764_1322403_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX05722.1|1323292_1323739_+	glutamate racemase	NA	NA	NA	NA	NA
AZX03370.1|1323820_1324522_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
AZX03371.1|1324522_1325290_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
AZX03372.1|1325286_1326525_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AZX03373.1|1326524_1327451_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AZX03374.1|1327553_1328669_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX03375.1|1328684_1329635_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03376.1|1329988_1330570_-	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
AZX03377.1|1330566_1331400_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AZX05723.1|1331610_1332924_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
AZX03378.1|1333100_1333982_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
AZX03379.1|1334001_1334853_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
AZX03380.1|1334905_1335994_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
AZX03381.1|1336104_1337232_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX05724.1|1337466_1338078_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX03382.1|1338176_1339127_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03383.1|1339348_1339726_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AZX05725.1|1339873_1340371_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AZX03384.1|1340367_1340895_+	RES domain-containing protein	NA	NA	NA	NA	NA
AZX03385.1|1341028_1341844_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX03386.1|1341856_1343038_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX03387.1|1343085_1343979_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
AZX05726.1|1344105_1344576_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03388.1|1344701_1345529_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
AZX03389.1|1345557_1346334_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AZX03390.1|1346330_1346624_-	biotin--protein ligase	NA	NA	NA	NA	NA
AZX03391.1|1346620_1347085_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX03392.1|1347096_1347882_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
AZX03393.1|1347907_1348408_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
AZX03394.1|1348490_1349669_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
AZX03395.1|1351296_1351632_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AZX03396.1|1351819_1353268_+	CoA transferase	NA	NA	NA	NA	NA
AZX03397.1|1353325_1353670_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
AZX03398.1|1353776_1354316_-	peroxiredoxin	NA	NA	NA	NA	NA
AZX03399.1|1354408_1355359_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03400.1|1355457_1356408_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03401.1|1356394_1356877_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03402.1|1357146_1357578_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03403.1|1357759_1358164_-	DoxX family protein	NA	NA	NA	NA	NA
AZX03404.1|1359400_1359724_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03405.1|1359726_1360614_-	aldo/keto reductase	NA	NA	NA	NA	NA
AZX03406.1|1360646_1361072_-	universal stress protein	NA	NA	NA	NA	NA
AZX03407.1|1361143_1361497_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03408.1|1361736_1362243_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03409.1|1362281_1363613_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
AZX03410.1|1363672_1364488_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AZX03411.1|1364484_1365339_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
AZX05727.1|1368401_1370945_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
AZX03412.1|1372311_1374066_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
AZX03413.1|1374062_1376183_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
AZX03414.1|1376187_1378383_-	1,4-alpha-glucan-branching protein	NA	NA	NA	NA	NA
AZX05728.1|1378379_1381721_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
AZX03415.1|1384523_1385474_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	1450078	1505565	4106548	transposase,protease	Mollivirus(16.67%)	56	NA	NA
AZX03467.1|1450078_1451029_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03468.1|1452230_1452677_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
AZX03469.1|1452669_1454145_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
AZX03470.1|1454141_1454897_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
AZX03471.1|1454889_1455900_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
AZX03472.1|1455889_1457566_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
AZX03473.1|1457878_1458211_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
AZX03474.1|1458224_1458620_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03475.1|1458629_1458956_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
AZX03476.1|1458952_1459279_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZX03477.1|1459205_1459619_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03478.1|1460223_1460604_-	flagellar protein FliT	NA	NA	NA	NA	NA
AZX03479.1|1460621_1461050_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
AZX03480.1|1461057_1462431_-	flagellar hook protein FliD	NA	NA	NA	NA	NA
AZX05732.1|1462571_1462949_-	flagellar protein	NA	NA	NA	NA	NA
AZX03481.1|1463211_1464519_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AZX03482.1|1464579_1465410_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX03483.1|1465406_1465895_+	colicin V synthesis protein	NA	NA	NA	NA	NA
AZX03484.1|1465936_1467457_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
AZX05733.1|1467500_1467977_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AZX03485.1|1468780_1471378_-	bifunctional uridylyltransferase/uridylyl-removing protein	NA	NA	NA	NA	NA
AZX03486.1|1471407_1472229_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
AZX03487.1|1472955_1473705_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
AZX03488.1|1473837_1474767_+	elongation factor Ts	NA	NA	NA	NA	NA
AZX03489.1|1474864_1475581_+	UMP kinase	NA	NA	NA	NA	NA
AZX03490.1|1475595_1476156_+	ribosome-recycling factor	NA	NA	NA	NA	NA
AZX03491.1|1476193_1477087_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	2.0e-18
AZX03492.1|1477106_1477964_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AZX03493.1|1477960_1479160_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AZX03494.1|1479199_1480534_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
AZX03495.1|1480586_1482923_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AZX05734.1|1483048_1483612_+	outer membrane protein chaperone	NA	NA	NA	NA	NA
AZX03496.1|1483620_1484712_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZX03497.1|1484783_1485239_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZX03498.1|1485239_1486034_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZX03499.1|1486030_1487212_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZX03500.1|1487198_1487804_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
AZX03501.1|1487800_1488574_+	RNA methyltransferase	NA	NA	NA	NA	NA
AZX03502.1|1488585_1489413_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA	NA
AZX03503.1|1489574_1491938_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
AZX03504.1|1492005_1492725_-	GMP synthase	NA	NA	NA	NA	NA
AZX03505.1|1492848_1493274_+	NfeD-like family protein 1	NA	NA	NA	NA	NA
AZX03506.1|1493308_1494259_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03507.1|1494376_1495303_+	paraslipin	NA	NA	NA	NA	NA
AZX03508.1|1495368_1496526_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AZX03509.1|1496506_1496974_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AZX03510.1|1497121_1498072_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03511.1|1498088_1498523_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AZX03512.1|1498512_1498863_+	RnfH family protein	NA	NA	NA	NA	NA
AZX03513.1|1499059_1500214_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX03514.1|1500210_1501383_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX03515.1|1501430_1502324_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX03516.1|1502369_1502807_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX03517.1|1502866_1503556_+	VIT family protein	NA	NA	NA	NA	NA
AZX03518.1|1503565_1504516_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03519.1|1504614_1505565_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	1799183	1856461	4106548	tRNA,transposase	Klosneuvirus(13.33%)	51	NA	NA
AZX03764.1|1799183_1800134_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03765.1|1800231_1802832_-	DUF3394 domain-containing protein	NA	NA	NA	NA	NA
AZX03766.1|1802938_1803943_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX03767.1|1804051_1805392_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
AZX03768.1|1805432_1806461_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03769.1|1806656_1807202_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03770.1|1807198_1807759_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
AZX03771.1|1807857_1808808_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03772.1|1808845_1809433_+	DUF1949 domain-containing protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
AZX03773.1|1809450_1809834_-	thioredoxin	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
AZX03774.1|1811193_1812486_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
AZX03775.1|1812620_1813661_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
AZX03776.1|1813758_1814775_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX03777.1|1815042_1815690_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX03778.1|1815815_1816574_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
AZX05746.1|1816648_1817338_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
AZX03779.1|1817355_1818240_+	peptidase	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
AZX03780.1|1818236_1819016_+	3'-5' exonuclease	NA	NA	NA	NA	NA
AZX03781.1|1819042_1819720_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05747.1|1820008_1820761_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03782.1|1820879_1822280_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
AZX03783.1|1822303_1822702_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZX03784.1|1822877_1823078_+	copper chaperone	NA	NA	NA	NA	NA
AZX03785.1|1823216_1823945_+	glutaredoxin	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
AZX03786.1|1824078_1825494_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
AZX03787.1|1825497_1826361_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AZX03788.1|1826373_1827123_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
AZX03789.1|1827305_1829321_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZX05748.1|1829302_1829851_-	arylesterase	NA	NA	NA	NA	NA
AZX03790.1|1829927_1830647_+	ABC transporter	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
AZX03791.1|1830745_1831696_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03792.1|1831844_1832183_-	phospholipid-binding protein	NA	NA	NA	NA	NA
AZX03793.1|1832240_1832402_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AZX03794.1|1832433_1832634_-	CsbD family protein	NA	NA	NA	NA	NA
AZX03795.1|1832899_1835473_-	cyanophycin synthetase	NA	NA	NA	NA	NA
AZX03796.1|1835543_1838117_-	cyanophycin synthetase	NA	NA	NA	NA	NA
AZX03797.1|1840643_1841132_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
AZX03798.1|1841223_1842375_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX03799.1|1842428_1843250_+	DUF455 domain-containing protein	NA	NA	NA	NA	NA
AZX03800.1|1843288_1844518_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
AZX03801.1|1844646_1845087_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
AZX03802.1|1845031_1845211_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03803.1|1845197_1846148_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03804.1|1846144_1846618_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX03805.1|1846779_1847718_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03806.1|1847719_1848928_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
AZX03807.1|1849032_1849539_-	lipoprotein signal peptidase	NA	NA	NA	NA	NA
AZX03808.1|1849541_1852403_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
AZX03809.1|1852392_1853358_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
AZX03810.1|1853417_1855412_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
AZX03811.1|1855510_1856461_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	1907710	1966980	4106548	tRNA,transposase,protease	Klosneuvirus(40.0%)	49	NA	NA
AZX03858.1|1907710_1908661_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03859.1|1908785_1909595_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX03860.1|1909795_1910746_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03861.1|1912019_1913237_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
AZX03862.1|1914293_1915196_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03863.1|1915272_1916145_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
AZX03864.1|1916275_1916644_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
AZX03865.1|1916701_1917748_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
AZX03866.1|1917943_1919200_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZX03867.1|1919204_1920542_+	glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX03868.1|1920691_1921648_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03869.1|1923120_1923471_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03870.1|1923518_1925093_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX03871.1|1925145_1926090_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX03872.1|1926107_1926938_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX03873.1|1926930_1928565_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
AZX03874.1|1928561_1929917_+	amidase	NA	NA	NA	NA	NA
AZX03875.1|1930823_1932401_+	lipoprotein	NA	NA	NA	NA	NA
AZX03876.1|1932404_1933679_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05749.1|1933776_1934151_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03877.1|1935866_1937000_+	general secretion pathway protein	NA	NA	NA	NA	NA
AZX03878.1|1937037_1937643_+	prepilin-type cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
AZX03879.1|1937639_1938458_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03880.1|1938529_1941154_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
AZX03881.1|1941140_1941395_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
AZX03882.1|1941461_1942043_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03883.1|1942346_1942607_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AZX03884.1|1942772_1943396_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AZX03885.1|1943395_1944169_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AZX03886.1|1944165_1945374_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AZX03887.1|1945399_1945873_-	RidA family protein	NA	NA	NA	NA	NA
AZX03888.1|1945946_1946897_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03889.1|1946995_1947946_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03890.1|1948044_1949394_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZX03891.1|1950159_1950915_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
AZX03892.1|1951007_1953890_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
AZX03893.1|1954212_1954638_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
AZX03894.1|1954665_1955814_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AZX03895.1|1955810_1956317_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX03896.1|1956323_1957619_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AZX03897.1|1957659_1958964_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX03898.1|1958965_1959604_+	hypothetical protein	NA	NA	NA	NA	NA
AZX03899.1|1959606_1960767_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AZX03900.1|1960793_1962149_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AZX03901.1|1962152_1963223_+	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AZX03902.1|1963361_1963598_+	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AZX03903.1|1963685_1964792_+	GTPase HflX	NA	NA	NA	NA	NA
AZX03904.1|1964757_1966062_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AZX03905.1|1966080_1966980_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 15
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	1977220	2021543	4106548	transposase	Staphylococcus_phage(25.0%)	44	NA	NA
AZX03913.1|1977220_1978171_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03914.1|1978269_1979220_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03915.1|1979206_1979407_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03916.1|1979419_1980505_+	AI-2E family transporter	NA	NA	NA	NA	NA
AZX03917.1|1980520_1981282_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX03918.1|1981278_1982202_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
AZX03919.1|1982300_1982825_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX03920.1|1982833_1983577_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AZX03921.1|1983672_1983912_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03922.1|1983925_1984078_-	lipoprotein	NA	NA	NA	NA	NA
AZX03923.1|1984163_1985654_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
AZX03924.1|1985745_1986684_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
AZX03925.1|1986680_1986857_-	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA	NA
AZX03926.1|1986859_1987522_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
AZX05751.1|1989143_1989287_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
AZX03927.1|1989283_1990258_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03928.1|1990424_1991375_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03929.1|1991371_1992646_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AZX03930.1|1992743_1993943_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AZX03931.1|1993939_1994593_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX03932.1|1994589_1996026_+	dethiobiotin synthase	NA	NA	NA	NA	NA
AZX03933.1|1996013_1996373_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
AZX03934.1|1997345_1998296_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03935.1|1999341_2001207_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX05752.1|2001464_2002985_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZX03936.1|2003072_2003723_-	flavodoxin family protein	NA	NA	NA	NA	NA
AZX03937.1|2004671_2005967_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AZX03938.1|2005988_2006873_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05753.1|2006971_2007847_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZX03939.1|2007836_2008193_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
AZX03940.1|2008266_2009298_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX03941.1|2009427_2009607_-	DUF3008 domain-containing protein	NA	NA	NA	NA	NA
AZX03942.1|2009704_2010229_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
AZX03943.1|2010239_2011076_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX03944.1|2011188_2011560_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX03945.1|2011556_2012108_+	ATPase	NA	NA	NA	NA	NA
AZX03946.1|2012123_2013815_-	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AZX03947.1|2013863_2014544_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX03948.1|2014791_2015256_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03949.1|2015425_2016355_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX03950.1|2016367_2017015_-	hypothetical protein	NA	NA	NA	NA	NA
AZX03951.1|2017088_2018906_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AZX03952.1|2018989_2019940_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX03953.1|2020592_2021543_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	2343450	2409318	4106548	tRNA,transposase	Pandoravirus(20.0%)	56	NA	NA
AZX04198.1|2343450_2343957_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
AZX04199.1|2343949_2344798_-	hydrolase	NA	NA	NA	NA	NA
AZX04200.1|2344895_2345438_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04201.1|2345481_2346432_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04202.1|2346587_2346914_-	cation:proton antiporter	NA	NA	NA	NA	NA
AZX04203.1|2346910_2347195_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AZX04204.1|2347191_2347671_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AZX04205.1|2347667_2349296_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AZX04206.1|2349292_2349637_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AZX04207.1|2349636_2352570_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AZX04208.1|2354776_2355073_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04209.1|2355179_2356097_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04210.1|2356101_2356815_-	NAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX04211.1|2356828_2357800_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX04212.1|2359519_2359900_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04213.1|2359903_2361091_+	MFS transporter	NA	NA	NA	NA	NA
AZX05767.1|2361529_2362252_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZX04214.1|2362545_2363496_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04215.1|2363492_2363921_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05768.1|2365322_2366285_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX04216.1|2366400_2367354_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04217.1|2367363_2368356_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX04218.1|2368407_2369163_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX04219.1|2369227_2369917_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX04220.1|2370138_2371089_+	hydrolase	NA	NA	NA	NA	NA
AZX04221.1|2371119_2372316_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX05769.1|2372312_2373086_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX05770.1|2373153_2374125_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX04222.1|2374210_2375155_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04223.1|2375132_2376002_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
AZX05771.1|2376245_2376869_+	glutathione S-transferase	NA	NA	NA	NA	NA
AZX04224.1|2377183_2377483_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX04225.1|2377496_2380571_-	autotransporter SphB2	NA	NA	NA	NA	NA
AZX04226.1|2380700_2381375_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX04227.1|2381367_2383182_+	histidine kinase	NA	NA	NA	NA	NA
AZX04228.1|2383235_2384183_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04229.1|2384287_2385238_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04230.1|2385790_2387416_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AZX05772.1|2387465_2388500_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AZX04231.1|2388502_2389849_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05773.1|2389845_2391360_-	VWA domain-containing protein	NA	NA	NA	NA	NA
AZX04232.1|2391350_2392361_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04233.1|2392834_2393776_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AZX04234.1|2393784_2394753_-	AAA family ATPase	NA	NA	NA	NA	NA
AZX04235.1|2396292_2397261_+	transporter	NA	NA	NA	NA	NA
AZX04236.1|2397438_2398428_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX04237.1|2398474_2399233_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX04238.1|2399422_2400160_+	hypothetical protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AZX04239.1|2400258_2401209_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04240.1|2401393_2402176_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AZX04241.1|2402169_2402871_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX04242.1|2403110_2403713_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04243.1|2405039_2405990_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04244.1|2405986_2407543_-	LTA synthase family protein	NA	NA	NA	NA	NA
AZX04245.1|2407535_2408309_-	oxidoreductase	NA	NA	NA	NA	NA
AZX04246.1|2408367_2409318_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	2445267	2511591	4106548	transposase	Ectocarpus_siliculosus_virus(10.0%)	58	NA	NA
AZX04270.1|2445267_2446218_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04271.1|2446237_2447143_-	pirin family protein	NA	NA	NA	NA	NA
AZX04272.1|2447220_2447919_-	pirin family protein	NA	NA	NA	NA	NA
AZX04273.1|2448078_2449023_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04274.1|2449032_2450523_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AZX04275.1|2450519_2451587_-	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
AZX04276.1|2451650_2453063_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AZX04277.1|2453248_2454469_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
AZX04278.1|2454490_2455441_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04279.1|2455539_2456190_-	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	NA	NA	NA	NA
AZX04280.1|2456307_2458110_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX04281.1|2457987_2459727_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.1	1.0e-10
AZX04282.1|2459761_2460667_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX04283.1|2460848_2462225_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX04284.1|2462391_2463132_-	ribonuclease PH	NA	NA	NA	NA	NA
AZX04285.1|2463268_2464195_+	YicC family protein	NA	NA	NA	NA	NA
AZX04286.1|2464467_2464623_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04287.1|2464635_2464764_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04288.1|2464760_2465045_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX04289.1|2465103_2466594_-	AMP nucleosidase	NA	NA	NA	NA	NA
AZX04290.1|2466838_2467438_+	NlpC/P60 family protein	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
AZX04291.1|2467442_2468213_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX04292.1|2468450_2469164_+	cytochrome C	NA	NA	NA	NA	NA
AZX04293.1|2469160_2470078_+	cytochrome C	NA	NA	NA	NA	NA
AZX04294.1|2470198_2470846_+	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
AZX04295.1|2470887_2471091_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AZX04296.1|2471115_2473395_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
AZX04297.1|2473407_2474136_-	glutamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
AZX04298.1|2474132_2474792_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
AZX04299.1|2474860_2475613_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
AZX04300.1|2475794_2476745_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04301.1|2477637_2478543_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AZX04302.1|2478554_2479682_+	lipoprotein	NA	NA	NA	NA	NA
AZX04303.1|2479770_2480385_-	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
AZX04304.1|2481038_2482226_-	cupin	NA	NA	NA	NA	NA
AZX05776.1|2482222_2484820_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
AZX04305.1|2485074_2485290_+	dodecin domain-containing protein	NA	NA	NA	NA	NA
AZX04306.1|2485745_2486300_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
AZX04307.1|2486567_2487128_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX04308.1|2487239_2488544_+	peptidase	NA	NA	NA	NA	NA
AZX04309.1|2488540_2490052_+	thiol oxidoreductase	NA	NA	NA	NA	NA
AZX04310.1|2490157_2491159_+	aminopeptidase	NA	NA	NA	NA	NA
AZX04311.1|2491139_2492261_+	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
AZX04312.1|2492184_2492373_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04313.1|2492359_2493310_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04314.1|2493306_2493933_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
AZX05777.1|2493998_2494844_+	hypothetical protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
AZX04315.1|2494947_2495547_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04316.1|2495543_2496308_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
AZX04317.1|2496377_2497328_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04318.1|2497426_2498035_-	recombination protein RecR	NA	NA	NA	NA	NA
AZX04319.1|2498085_2498412_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AZX04320.1|2498458_2500684_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
AZX04321.1|2501351_2504756_-	nuclease	NA	NA	NA	NA	NA
AZX04322.1|2504768_2507429_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04323.1|2507632_2508835_-	MFS transporter	NA	NA	NA	NA	NA
AZX04324.1|2509521_2510634_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
AZX04325.1|2510640_2511591_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	2539636	2590808	4106548	tRNA,transposase	Salmonella_phage(20.0%)	48	NA	NA
AZX04357.1|2539636_2540587_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04358.1|2540685_2541456_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
AZX04359.1|2541452_2542124_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
AZX04360.1|2542120_2542762_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
AZX04361.1|2542774_2543695_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
AZX04362.1|2543855_2545016_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX04363.1|2545057_2546008_-	ornithine cyclodeaminase	NA	NA	NA	NA	NA
AZX04364.1|2546606_2546831_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04365.1|2546995_2548690_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AZX04366.1|2548811_2549081_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AZX04367.1|2549196_2549595_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AZX04368.1|2549605_2550562_-	glutathione synthetase	NA	NA	NA	NA	NA
AZX04369.1|2550698_2551244_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
AZX04370.1|2551264_2553214_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
AZX04371.1|2553601_2554378_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX04372.1|2554383_2554776_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04373.1|2555197_2556148_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04374.1|2556144_2557242_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
AZX04375.1|2557273_2558224_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04376.1|2560005_2561247_-	MFS transporter	NA	NA	NA	NA	NA
AZX04377.1|2561258_2562032_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZX04378.1|2562058_2563009_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04379.1|2563107_2563890_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX04380.1|2563978_2565205_-	transporter	NA	NA	NA	NA	NA
AZX04381.1|2565930_2567316_+	alcaligin biosynthesis enzyme	NA	NA	NA	NA	NA
AZX04382.1|2567334_2567940_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX04383.1|2567936_2569793_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AZX04384.1|2569789_2570590_+	siderophore ferric iron reductase	NA	NA	NA	NA	NA
AZX04385.1|2570604_2571798_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZX04386.1|2571865_2572840_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX04387.1|2572962_2574186_+	MFS transporter	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
AZX04388.1|2574296_2576501_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX04389.1|2576795_2577455_+	antibiotic resistance protein	NA	NA	NA	NA	NA
AZX04390.1|2577462_2577669_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04391.1|2578007_2578763_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX04392.1|2578778_2578940_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04393.1|2579033_2579549_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
AZX04394.1|2579821_2580139_+	virulence factor	NA	NA	NA	NA	NA
AZX04395.1|2580326_2580575_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04396.1|2580853_2582209_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
AZX04397.1|2582255_2583635_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
AZX04398.1|2583697_2584330_-	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AZX05779.1|2584329_2586690_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
AZX04399.1|2586731_2587691_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
AZX04400.1|2587677_2588364_+	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AZX04401.1|2588360_2588693_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AZX04402.1|2588808_2589759_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04403.1|2589857_2590808_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	2689103	2729771	4106548	tRNA,transposase	Salmonella_phage(33.33%)	43	NA	NA
AZX04486.1|2689103_2690054_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04487.1|2690164_2690347_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04488.1|2690446_2691043_-	lipoprotein	NA	NA	NA	NA	NA
AZX04489.1|2691226_2692318_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04490.1|2692817_2693228_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04491.1|2693286_2693628_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
AZX04492.1|2693633_2696051_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX04493.1|2696063_2697086_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
AZX04494.1|2697160_2697520_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AZX04495.1|2697535_2697733_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AZX04496.1|2698068_2699019_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04497.1|2699005_2699194_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04498.1|2699213_2699663_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AZX04499.1|2699659_2700610_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04500.1|2700720_2702169_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX04501.1|2702283_2702565_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04502.1|2702668_2703619_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04503.1|2703863_2704577_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX04504.1|2704699_2704927_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX04505.1|2705221_2705860_-	DedA family protein	NA	NA	NA	NA	NA
AZX04506.1|2705932_2707003_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZX04507.1|2706999_2707950_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04508.1|2708364_2708889_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZX04509.1|2708892_2709162_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04510.1|2709360_2710422_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZX04511.1|2710505_2712140_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZX04512.1|2712141_2712945_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX04513.1|2712973_2713933_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX04514.1|2713936_2715451_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX04515.1|2715487_2716492_-	peptidase M20	NA	NA	NA	NA	NA
AZX04516.1|2716923_2717394_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZX04517.1|2717429_2718041_-	LysE family translocator	NA	NA	NA	NA	NA
AZX04518.1|2718071_2718695_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZX04519.1|2718775_2720308_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX04520.1|2720342_2721584_-	MFS transporter	NA	NA	NA	NA	NA
AZX04521.1|2721627_2722659_-	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZX04522.1|2722655_2723825_-	amine oxidase	NA	NA	NA	NA	NA
AZX04523.1|2723818_2724499_-	anti-sigma factor	NA	NA	NA	NA	NA
AZX04524.1|2724660_2725503_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04525.1|2725665_2726637_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX04526.1|2726808_2727687_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZX04527.1|2727709_2728780_-	FUSC family protein	NA	NA	NA	NA	NA
AZX04528.1|2728820_2729771_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	2791344	2928058	4106548	transposase,protease	Agrobacterium_phage(14.29%)	101	NA	NA
AZX04579.1|2791344_2792295_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04580.1|2792291_2799953_-	adhesin	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
AZX04581.1|2800193_2804240_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
AZX04582.1|2804552_2805134_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AZX04583.1|2805130_2806429_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX04584.1|2806508_2807537_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX04585.1|2807460_2807811_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04586.1|2808743_2809694_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04587.1|2810010_2810616_+	fimbrial protein FimX	NA	NA	NA	NA	NA
AZX04588.1|2810669_2811983_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AZX04589.1|2812057_2812528_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA	NA
AZX04590.1|2812527_2813316_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AZX04591.1|2813326_2814979_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AZX04592.1|2815066_2816017_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05789.1|2817178_2817685_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AZX04593.1|2817681_2818446_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AZX04594.1|2818461_2818746_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AZX04595.1|2818810_2819800_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AZX04596.1|2819971_2820901_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AZX04597.1|2820872_2821559_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AZX04598.1|2821592_2822138_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AZX04599.1|2822182_2823448_+	peptidase M48	NA	NA	NA	NA	NA
AZX04600.1|2823444_2824347_+	ribosome biogenesis GTPase	NA	NA	NA	NA	NA
AZX04601.1|2825528_2826473_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX04602.1|2826567_2828085_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX04603.1|2828126_2829755_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX04604.1|2829862_2830744_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04605.1|2833856_2834231_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AZX04606.1|2834255_2834594_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AZX04607.1|2834637_2836272_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AZX04608.1|2836310_2837657_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA	NA
AZX05790.1|2837764_2839186_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AZX04609.1|2839255_2839840_-	nitroreductase	NA	NA	NA	NA	NA
AZX04610.1|2839942_2840893_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04611.1|2841027_2842134_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04612.1|2842144_2843242_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AZX04613.1|2843386_2844592_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZX04614.1|2844598_2845120_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AZX04615.1|2845116_2845608_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AZX04616.1|2845604_2845856_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AZX04617.1|2845836_2846322_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AZX04618.1|2846457_2849919_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04619.1|2849915_2850821_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AZX04620.1|2850830_2851262_-	lipoprotein	NA	NA	NA	NA	NA
AZX05791.1|2851508_2852012_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AZX04621.1|2852023_2853490_+	MFS transporter	NA	NA	NA	NA	NA
AZX04622.1|2853564_2854440_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05792.1|2854436_2855444_-	biotin synthase	NA	NA	NA	NA	NA
AZX04623.1|2855911_2856217_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX04624.1|2856307_2856898_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04625.1|2857088_2858105_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX04626.1|2858296_2860633_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
AZX04627.1|2860715_2861150_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZX04628.1|2861248_2862199_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04629.1|2862297_2863248_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04630.1|2863244_2864039_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZX04631.1|2864070_2864775_-	oxidoreductase	NA	NA	NA	NA	NA
AZX04632.1|2864849_2865650_-	SURF1 family protein	NA	NA	NA	NA	NA
AZX04633.1|2865646_2866054_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZX04634.1|2866050_2866692_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZX04635.1|2866684_2868706_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX04636.1|2869945_2871277_+	MFS transporter	NA	NA	NA	NA	NA
AZX04637.1|2871273_2872224_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04638.1|2873930_2874236_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04639.1|2874904_2875243_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX04640.1|2879796_2880399_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04641.1|2880495_2881785_+	MFS transporter	NA	NA	NA	NA	NA
AZX04642.1|2881842_2882574_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZX04643.1|2882570_2883374_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZX04644.1|2883370_2884459_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX04645.1|2884455_2885385_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX04646.1|2885533_2886679_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX04647.1|2887980_2891802_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX04648.1|2891958_2892627_-	lipoprotein	NA	NA	NA	NA	NA
AZX04649.1|2892631_2894305_-	MCE family protein	NA	NA	NA	NA	NA
AZX04650.1|2894323_2895643_-	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AZX04651.1|2895647_2897999_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZX05793.1|2898018_2900187_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZX04652.1|2900183_2905373_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZX04653.1|2905462_2905777_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZX04654.1|2906004_2906250_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZX04655.1|2906344_2906863_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZX04656.1|2906962_2908168_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZX04657.1|2908283_2909681_-	chloride channel protein EriC	NA	NA	NA	NA	NA
AZX04658.1|2909797_2910376_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZX04659.1|2910448_2911840_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZX04660.1|2912007_2912958_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04661.1|2913238_2913859_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZX04662.1|2913855_2914269_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZX04663.1|2914265_2915309_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZX04664.1|2915364_2915553_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04665.1|2915562_2916327_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZX04666.1|2916417_2917074_+	adenylate kinase	NA	NA	NA	NA	NA
AZX04667.1|2917165_2917924_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX04668.1|2917949_2919551_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZX04669.1|2919751_2920756_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZX04670.1|2920856_2921120_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZX04671.1|2921237_2922014_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZX04672.1|2922604_2923555_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04673.1|2925938_2927051_-	malate dehydrogenase	NA	NA	NA	NA	NA
AZX04674.1|2927107_2928058_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	2958444	3002135	4106548	transposase	Planktothrix_phage(33.33%)	42	NA	NA
AZX04703.1|2958444_2959395_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04704.1|2959381_2959627_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04705.1|2959515_2960412_-	inositol monophosphatase	NA	NA	NA	NA	NA
AZX04706.1|2962689_2964915_+	glycosyl hydrolase	NA	NA	NA	NA	NA
AZX04707.1|2965079_2966168_+	methionine import ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZX04708.1|2966124_2966778_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX04709.1|2966825_2967623_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX04710.1|2968154_2969105_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04711.1|2969185_2970334_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZX04712.1|2970390_2971341_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04713.1|2971327_2971546_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04714.1|2971439_2971745_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX04715.1|2971773_2972208_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX04716.1|2972209_2973454_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX04717.1|2973450_2974161_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05795.1|2974175_2975087_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX04718.1|2975449_2975854_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04719.1|2975850_2976309_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04720.1|2976315_2977224_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05796.1|2977220_2978087_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX04721.1|2978073_2978901_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX04722.1|2978911_2980039_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZX04723.1|2981116_2982355_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04724.1|2982396_2983659_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX04725.1|2983665_2984418_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX04726.1|2984469_2984655_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04727.1|2984930_2985395_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZX04728.1|2985426_2986086_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZX04729.1|2986230_2988339_+	AsmA family protein	NA	NA	NA	NA	NA
AZX04730.1|2988335_2989286_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04731.1|2989389_2990010_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05797.1|2990113_2990854_+	oxidoreductase	NA	NA	NA	NA	NA
AZX04732.1|2991988_2993113_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04733.1|2993158_2993527_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04734.1|2993768_2994719_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04735.1|2995754_2996297_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04736.1|2996501_2996696_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04737.1|2996682_2997633_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04738.1|2997629_2998595_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04739.1|2998664_2999501_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
AZX04740.1|2999977_3001123_+	porin	NA	NA	NA	NA	NA
AZX04741.1|3001184_3002135_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	3186551	3247580	4106548	transposase	Xanthomonas_phage(50.0%)	49	NA	NA
AZX04888.1|3186551_3187502_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04889.1|3187510_3188059_+	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA	NA
AZX04890.1|3188055_3188664_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX04891.1|3188846_3189317_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX04892.1|3189323_3190583_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZX04893.1|3190635_3191448_-	oxidoreductase	NA	NA	NA	NA	NA
AZX04894.1|3191562_3192117_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX04895.1|3192126_3193116_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX04896.1|3193295_3194015_-	VOC family protein	NA	NA	NA	NA	NA
AZX04897.1|3194031_3196767_-	protein translocase subunit SecA	NA	NA	NA	NA	NA
AZX05812.1|3196946_3197933_-	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	51.8	3.4e-27
AZX04898.1|3197974_3198469_+	DUF721 domain-containing protein	NA	NA	NA	NA	NA
AZX04899.1|3198580_3199504_-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
AZX04900.1|3199732_3200917_-	cell division protein FtsZ	NA	NA	NA	NA	NA
AZX04901.1|3201105_3202332_-	cell division protein FtsA	NA	NA	NA	NA	NA
AZX04902.1|3202336_3203158_-	cell division protein FtsQ	NA	NA	NA	NA	NA
AZX04903.1|3203170_3204121_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
AZX04904.1|3204117_3205524_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
AZX04905.1|3205520_3206594_-	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	NA	NA	NA	NA	NA
AZX04906.1|3206590_3207784_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
AZX04907.1|3207780_3209313_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
AZX04908.1|3209309_3210479_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
AZX04909.1|3210468_3213306_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
AZX05813.1|3213302_3215003_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
AZX04910.1|3215029_3215308_-	cell division protein FtsL	NA	NA	NA	NA	NA
AZX04911.1|3215307_3216402_-	ribosomal RNA small subunit methyltransferase H	NA	NA	NA	NA	NA
AZX04912.1|3216410_3216902_-	transcriptional regulator MraZ	NA	NA	NA	NA	NA
AZX04913.1|3217641_3219450_+	ABC transporter ATP-binding protein	NA	A0A1B0RXA0	Streptococcus_phage	28.6	1.6e-43
AZX04914.1|3219489_3220569_-	dihydroorotase	NA	NA	NA	NA	NA
AZX04915.1|3220565_3221759_-	amidohydrolase	NA	NA	NA	NA	NA
AZX04916.1|3221908_3222187_+	DNA topoisomerase III	NA	NA	NA	NA	NA
AZX04917.1|3222515_3222908_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05814.1|3229632_3230109_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX04918.1|3230261_3231374_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
AZX04919.1|3231441_3232002_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
AZX04920.1|3232025_3232358_-	cytochrome C	NA	NA	NA	NA	NA
AZX04921.1|3232341_3234030_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZX04922.1|3234149_3234938_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AZX04923.1|3235645_3236596_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04924.1|3237040_3237352_-	cell division protein ZapA	NA	NA	NA	NA	NA
AZX04925.1|3237351_3237882_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04926.1|3238044_3238995_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04927.1|3239093_3240044_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04928.1|3240333_3240798_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZX04929.1|3240812_3242318_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZX04930.1|3242571_3244179_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX04931.1|3244234_3245140_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX04932.1|3245580_3246531_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04933.1|3246629_3247580_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	3269305	3307720	4106548	holin,transposase	Tupanvirus(16.67%)	36	NA	NA
AZX04955.1|3269305_3269641_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX04956.1|3269640_3270483_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZX04957.1|3270581_3271532_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04958.1|3271596_3272568_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04959.1|3272631_3273651_-	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
AZX05817.1|3273652_3275026_-	MFS transporter	NA	NA	NA	NA	NA
AZX04960.1|3275303_3275984_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AZX04961.1|3275996_3278123_+	lytic transglycosylase	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
AZX04962.1|3278119_3279214_+	CCA-adding enzyme	NA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
AZX04963.1|3279228_3280488_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX04964.1|3280507_3282232_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
AZX04965.1|3282470_3283223_-	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
AZX04966.1|3283361_3284312_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05818.1|3284624_3286103_+	phospholipase D family protein	NA	NA	NA	NA	NA
AZX04967.1|3286109_3287219_-	molybdenum import ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
AZX04968.1|3287230_3287911_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AZX04969.1|3287932_3288688_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX05819.1|3288823_3289708_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX04970.1|3289795_3290377_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04971.1|3290469_3290592_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04972.1|3290637_3290937_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX05820.1|3291088_3291514_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04973.1|3293720_3294224_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX04974.1|3294239_3295190_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04975.1|3295176_3295374_-	hypothetical protein	NA	NA	NA	NA	NA
AZX04976.1|3295717_3296491_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX04977.1|3296623_3297634_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX04978.1|3297785_3299441_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX04979.1|3299495_3299837_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AZX04980.1|3299850_3301290_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX04981.1|3301422_3302238_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04982.1|3302256_3302445_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04983.1|3302431_3303382_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX04984.1|3304769_3305717_+	hypothetical protein	NA	NA	NA	NA	NA
AZX04985.1|3305943_3306684_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX04986.1|3306769_3307720_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	3402988	3448060	4106548	tRNA,transposase	Staphylococcus_phage(20.0%)	38	NA	NA
AZX05055.1|3402988_3403939_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05056.1|3404705_3405800_-	CoA transferase	NA	NA	NA	NA	NA
AZX05057.1|3405792_3407127_-	CoA ligase	NA	NA	NA	NA	NA
AZX05058.1|3407080_3407764_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05059.1|3407789_3408953_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX05060.1|3408949_3409951_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX05061.1|3409950_3410823_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX05062.1|3410819_3411569_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZX05063.1|3411565_3412357_-	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZX05064.1|3412353_3413493_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX05065.1|3413801_3414554_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX05066.1|3414587_3415370_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX05067.1|3415373_3415763_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX05068.1|3416902_3417766_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX05069.1|3417801_3418890_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05070.1|3418886_3419837_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05071.1|3419823_3420192_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05072.1|3420190_3423169_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05073.1|3424095_3424974_+	fatty acid desaturase	NA	NA	NA	NA	NA
AZX05074.1|3426922_3427873_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05075.1|3427869_3428337_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZX05076.1|3428379_3429150_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX05077.1|3429170_3429971_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZX05078.1|3429981_3431391_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZX05079.1|3431485_3432271_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX05080.1|3432510_3433527_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX05081.1|3433634_3434027_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZX05082.1|3434164_3434845_+	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AZX05083.1|3434849_3435848_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05084.1|3435916_3436867_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05085.1|3438371_3439073_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
AZX05086.1|3439072_3440497_+	ATP-binding protein	NA	NA	NA	NA	NA
AZX05087.1|3441566_3442907_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX05088.1|3443022_3444786_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AZX05089.1|3444897_3445776_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZX05090.1|3445888_3446704_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZX05091.1|3446707_3446959_+	cell division topological specificity factor	NA	NA	NA	NA	NA
AZX05092.1|3447043_3448060_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
>prophage 25
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	3465804	3590726	4106548	tRNA,transposase	Acinetobacter_phage(22.22%)	105	NA	NA
AZX05103.1|3465804_3466821_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX05104.1|3466916_3467627_-	oxidoreductase	NA	NA	NA	NA	NA
AZX05824.1|3467623_3468613_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05105.1|3468744_3470340_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZX05106.1|3470342_3471080_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05107.1|3471235_3472108_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZX05108.1|3472376_3473597_+	MFS transporter	NA	NA	NA	NA	NA
AZX05109.1|3473593_3474253_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX05110.1|3474324_3474957_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZX05111.1|3474986_3475505_+	flavin reductase	NA	NA	NA	NA	NA
AZX05112.1|3475515_3476625_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX05113.1|3476671_3477526_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZX05114.1|3477527_3478430_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05115.1|3479652_3480603_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05116.1|3482359_3483349_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05117.1|3483524_3484313_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZX05118.1|3484309_3485341_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZX05119.1|3485359_3485923_-	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZX05120.1|3485978_3487499_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZX05121.1|3487762_3488467_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX05122.1|3488474_3489212_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZX05123.1|3489317_3489692_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZX05124.1|3489734_3491024_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05125.1|3491020_3492190_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZX05126.1|3492186_3493026_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZX05127.1|3493085_3494021_+	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZX05128.1|3494033_3494984_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05129.1|3495082_3496045_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZX05130.1|3496076_3496436_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZX05131.1|3496560_3497463_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZX05132.1|3497464_3499237_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
AZX05133.1|3499271_3500048_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX05825.1|3503172_3503493_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX05134.1|3503565_3504447_+	ATP synthase subunit A	NA	NA	NA	NA	NA
AZX05135.1|3504563_3504806_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
AZX05136.1|3504943_3505414_+	ATP synthase subunit B	NA	NA	NA	NA	NA
AZX05137.1|3505426_3505966_+	ATP synthase subunit delta	NA	NA	NA	NA	NA
AZX05138.1|3506000_3507542_+	ATP synthase subunit alpha	NA	NA	NA	NA	NA
AZX05139.1|3507640_3508546_+	ATP synthase subunit gamma	NA	NA	NA	NA	NA
AZX05140.1|3508588_3509989_+	ATP synthase subunit beta	NA	NA	NA	NA	NA
AZX05141.1|3509998_3510421_+	ATP synthase epsilon chain	NA	NA	NA	NA	NA
AZX05826.1|3510603_3511488_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05142.1|3511563_3512640_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AZX05143.1|3512946_3515049_+	primosomal protein N'	NA	NA	NA	NA	NA
AZX05144.1|3515091_3517161_+	ATP-dependent DNA helicase Rep	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
AZX05145.1|3517259_3518210_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05146.1|3518338_3519472_-	peptidase	NA	NA	NA	NA	NA
AZX05147.1|3519515_3520421_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX05148.1|3520423_3522124_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
AZX05149.1|3522120_3523041_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX05150.1|3523048_3524026_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX05151.1|3524084_3525119_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZX05152.1|3527093_3527330_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05153.1|3527456_3528320_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZX05154.1|3528408_3529230_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX05155.1|3529309_3530047_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX05156.1|3530043_3531036_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AZX05157.1|3531149_3531812_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05158.1|3531856_3533005_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX05159.1|3535328_3536279_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05160.1|3536619_3537570_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05161.1|3537668_3538619_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05162.1|3538915_3539413_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05163.1|3539455_3541231_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AZX05827.1|3541277_3542105_+	copper resistance protein B	NA	NA	NA	NA	NA
AZX05164.1|3542111_3542846_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX05165.1|3544015_3544810_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05166.1|3545099_3545690_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX05167.1|3545723_3547052_-	amidase	NA	NA	NA	NA	NA
AZX05168.1|3547126_3548272_-	transporter	NA	NA	NA	NA	NA
AZX05169.1|3548383_3549382_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05170.1|3549344_3549779_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AZX05171.1|3551295_3552180_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX05172.1|3552176_3553382_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZX05173.1|3553378_3554239_-	endonuclease	NA	NA	NA	NA	NA
AZX05174.1|3554351_3556142_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AZX05175.1|3556182_3556848_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
AZX05176.1|3556848_3557157_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
AZX05828.1|3557322_3558609_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05177.1|3560042_3560993_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05178.1|3562944_3564159_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AZX05179.1|3564264_3565254_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AZX05180.1|3565250_3565859_+	hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AZX05181.1|3565871_3566501_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AZX05182.1|3566497_3567118_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AZX05183.1|3567149_3567941_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AZX05184.1|3568783_3569248_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZX05185.1|3569266_3570193_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZX05186.1|3570246_3571533_-	cytochrome c	NA	NA	NA	NA	NA
AZX05187.1|3572463_3573336_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AZX05188.1|3573332_3574283_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AZX05189.1|3574381_3575332_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05830.1|3575436_3575667_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05829.1|3575793_3576183_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05190.1|3576199_3578581_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZX05191.1|3578573_3579950_-	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
AZX05192.1|3579965_3580961_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX05193.1|3580979_3581972_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05194.1|3582212_3582773_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA	NA
AZX05195.1|3582777_3583104_-	monothiol glutaredoxin, Grx4 family	NA	NA	NA	NA	NA
AZX05196.1|3583140_3583953_-	protein-(glutamine-N5) methyltransferase, release factor-specific	NA	NA	NA	NA	NA
AZX05197.1|3583963_3585046_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
AZX05198.1|3585132_3586407_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
AZX05199.1|3587301_3588252_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05200.1|3588350_3590726_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C	tRNA	NA	NA	NA	NA
>prophage 26
CP025353	Bordetella pertussis strain J024 chromosome, complete genome	4106548	3706578	3839504	4106548	tRNA,transposase,integrase	uncultured_Mediterranean_phage(10.34%)	118	3751221:3751238	3795861:3795878
AZX05297.1|3706578_3707529_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05298.1|3707525_3708161_-	transporter	NA	NA	NA	NA	NA
AZX05299.1|3708290_3709190_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
AZX05300.1|3709285_3709777_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
AZX05301.1|3709823_3710789_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05302.1|3711922_3713164_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
AZX05303.1|3713277_3714294_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
AZX05304.1|3714328_3714805_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05305.1|3714947_3715856_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
AZX05306.1|3715969_3717082_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
AZX05307.1|3717182_3717716_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX05308.1|3717804_3719055_+	kynureninase	NA	NA	NA	NA	NA
AZX05309.1|3719156_3719669_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
AZX05310.1|3719574_3719781_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05311.1|3719767_3720718_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05312.1|3720783_3721722_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
AZX05313.1|3721744_3722371_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
AZX05314.1|3722367_3723024_-	HAD family hydrolase	NA	NA	NA	NA	NA
AZX05315.1|3723020_3723623_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05316.1|3723629_3724256_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.5e-07
AZX05317.1|3724397_3724967_+	bacterioferritin	NA	NA	NA	NA	NA
AZX05318.1|3725037_3726357_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AZX05319.1|3726463_3726655_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AZX05320.1|3726906_3728196_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX05321.1|3728350_3729346_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05322.1|3729430_3730105_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05323.1|3730101_3731052_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05324.1|3731038_3731221_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05325.1|3731213_3732455_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
AZX05326.1|3732451_3733396_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
AZX05327.1|3733514_3734465_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05328.1|3734424_3735354_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05329.1|3735407_3735743_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
AZX05330.1|3735787_3736552_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX05331.1|3736575_3737316_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05332.1|3737323_3738898_-	long-chain fatty acid--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.6	2.0e-13
AZX05333.1|3738911_3739889_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05334.1|3740161_3740761_-	ureidoglycolate hydrolase	NA	NA	NA	NA	NA
AZX05335.1|3740794_3747697_-	autotransporter BatB	NA	NA	NA	NA	NA
AZX05336.1|3748143_3748275_-	entericidin	NA	NA	NA	NA	NA
AZX05337.1|3748306_3748468_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05338.1|3748540_3748747_-	DUF3596 domain-containing protein	NA	NA	NA	NA	NA
AZX05339.1|3749751_3750411_+	haloacid dehalogenase	NA	NA	NA	NA	NA
AZX05340.1|3750438_3751584_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
3751221:3751238	attL	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
AZX05341.1|3751724_3752060_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
AZX05342.1|3752134_3752995_-	Band 7 protein	NA	A0A2C9D0H9	Yersinia_phage	53.6	1.7e-51
AZX05343.1|3753258_3753960_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX05344.1|3754129_3754525_+	RidA family protein	NA	NA	NA	NA	NA
AZX05345.1|3754634_3755585_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05346.1|3755595_3756237_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05347.1|3756403_3756646_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05348.1|3756744_3757695_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05349.1|3757730_3758198_+	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
AZX05350.1|3758431_3758809_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05351.1|3758805_3758988_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05352.1|3758991_3759978_+	DNA recombinase	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
AZX05353.1|3759974_3760622_+	exonuclease	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
AZX05354.1|3760679_3761207_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05355.1|3761240_3762428_+	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
AZX05356.1|3762417_3762780_+	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	47.9	1.8e-13
AZX05357.1|3762772_3762892_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05358.1|3762892_3763093_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX05359.1|3763089_3764079_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
AZX05360.1|3765565_3767536_-	DUF3120 domain-containing protein	NA	NA	NA	NA	NA
AZX05361.1|3767777_3768176_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05362.1|3768184_3769108_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05363.1|3769565_3770516_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05364.1|3770746_3772438_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
AZX05365.1|3772486_3772759_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
AZX05366.1|3772755_3773127_-	ribonuclease P protein component	NA	NA	NA	NA	NA
AZX05367.1|3773222_3773357_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
AZX05368.1|3773762_3775172_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
AZX05369.1|3775168_3776284_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.6e-41
AZX05370.1|3776378_3778832_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
AZX05371.1|3778950_3779742_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05372.1|3779861_3781289_+	amidase	NA	NA	NA	NA	NA
AZX05838.1|3781327_3782299_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05373.1|3782717_3783881_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX05374.1|3783968_3784814_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX05375.1|3786370_3787321_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05376.1|3787875_3788250_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX05377.1|3788324_3789383_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZX05378.1|3789406_3790357_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05379.1|3793238_3794408_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX05839.1|3794508_3796116_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
3795861:3795878	attR	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
AZX05380.1|3796162_3798184_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
AZX05381.1|3798212_3798458_-	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
AZX05382.1|3798471_3799662_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
AZX05383.1|3799857_3800823_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX05384.1|3800845_3801985_-	alanine racemase	NA	NA	NA	NA	NA
AZX05385.1|3802196_3803159_+	immunogenic protein	NA	NA	NA	NA	NA
AZX05386.1|3803282_3805307_+	C4-dicarboxylate ABC transporter permease	NA	NA	NA	NA	NA
AZX05387.1|3805503_3807747_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX05388.1|3808025_3808484_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05389.1|3809411_3812033_-	hypothetical protein	NA	NA	NA	NA	NA
AZX05390.1|3812096_3814724_+	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
AZX05391.1|3814875_3815940_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX05392.1|3815936_3816710_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
AZX05393.1|3816718_3817552_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX05394.1|3817564_3818344_+	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
AZX05840.1|3818378_3819851_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AZX05395.1|3819878_3820637_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX05396.1|3820692_3822543_-	acetolactate synthase, large subunit, biosynthetic type	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
AZX05397.1|3822636_3823113_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX05398.1|3823129_3824050_-	bestrophin	NA	NA	NA	NA	NA
AZX05399.1|3824156_3824657_+	SET domain-containing protein	NA	NA	NA	NA	NA
AZX05400.1|3825030_3825723_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
AZX05401.1|3826031_3826982_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX05402.1|3826978_3830752_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
AZX05403.1|3831088_3832978_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
AZX05404.1|3832989_3833883_+	cobalamin-binding protein	NA	NA	NA	NA	NA
AZX05405.1|3833908_3834784_+	thiazole synthase	NA	NA	NA	NA	NA
AZX05406.1|3834780_3835632_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AZX05407.1|3835693_3836374_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
AZX05408.1|3836377_3836737_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05409.1|3836737_3837697_+	hypothetical protein	NA	NA	NA	NA	NA
AZX05410.1|3837717_3838206_-	D-beta-D-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
AZX05411.1|3838487_3839504_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
