The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	0	122073	4105484	transposase,protease,tRNA	Planktothrix_phage(16.67%)	110	NA	NA
AZX13036.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZX13037.1|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA	NA
AZX13038.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZX13039.1|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX13040.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZX13041.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZX13042.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZX13043.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZX13044.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZX13045.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZX13046.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZX13047.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZX13048.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZX13049.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZX16428.1|20126_20531_-	lipoprotein	NA	NA	NA	NA	NA
AZX13050.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13051.1|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZX13052.1|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX13053.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13054.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
AZX13055.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13056.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
AZX13057.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
AZX16429.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13058.1|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX13059.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX13060.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13061.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
AZX13062.1|36949_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZX13063.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX13064.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZX13065.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX13066.1|41318_42212_+	M48 family peptidase	NA	NA	NA	NA	NA
AZX13067.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZX13068.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZX13069.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AZX13070.1|43663_44614_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13071.1|45113_45749_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13072.1|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX13073.1|46084_46978_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13074.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZX13075.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZX13076.1|50141_51092_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13077.1|51134_52391_+	MFS transporter	NA	NA	NA	NA	NA
AZX13078.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZX13079.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZX13080.1|54977_55667_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX13081.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX13082.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX13083.1|57497_58448_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13084.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZX13085.1|60474_60894_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX13086.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13087.1|62442_63279_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13088.1|63473_64055_-|protease	protease	protease	NA	NA	NA	NA
AZX13089.1|64067_64385_-	ferredoxin	NA	NA	NA	NA	NA
AZX13090.1|64488_65547_-	oxidoreductase	NA	NA	NA	NA	NA
AZX13091.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX13092.1|67482_68664_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13093.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13094.1|70129_70444_+|transposase	transposase	transposase	NA	NA	NA	NA
AZX13095.1|71636_73544_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZX13096.1|73705_74326_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX13097.1|74357_74939_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZX13098.1|75027_75279_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16430.1|75280_76030_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13099.1|76228_77638_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZX13100.1|77634_78585_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16431.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13101.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZX13102.1|82822_83527_-	DUF2837 domain-containing protein	NA	NA	NA	NA	NA
AZX13103.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZX13104.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
AZX13105.1|85481_86714_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA	NA
AZX13106.1|86731_87991_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZX13107.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZX13108.1|89110_90211_-	aminotransferase DegT	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZX13109.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX13110.1|90793_91846_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AZX13111.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZX13112.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZX13113.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13114.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AZX13115.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZX13116.1|96203_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX13117.1|97339_98179_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZX13118.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13119.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX13120.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AZX13121.1|101788_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZX13122.1|102808_103084_+	DUF493 domain-containing protein	NA	NA	NA	NA	NA
AZX13123.1|103091_103754_+	octanoyltransferase	NA	NA	NA	NA	NA
AZX13124.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
AZX13125.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AZX13126.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZX13127.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZX13128.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13129.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX13130.1|110552_111182_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AZX13131.1|111243_111927_-	cell division protein	NA	NA	NA	NA	NA
AZX13132.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX16432.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZX13133.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
AZX16433.1|114944_115961_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX13134.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX13135.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX13136.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX13137.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZX13138.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
AZX13139.1|121122_122073_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	164895	225406	4105484	transposase,protease,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
AZX13170.1|164895_165846_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13171.1|167289_168192_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13172.1|168169_168799_-	LemA family protein	NA	NA	NA	NA	NA
AZX13173.1|169129_170512_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZX13174.1|170545_171175_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZX13175.1|171223_172831_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZX13176.1|172855_173539_+	hypothetical protein	NA	NA	NA	NA	NA
AZX16439.1|173620_174097_-	bacterioferritin	NA	NA	NA	NA	NA
AZX13177.1|174303_175254_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13178.1|176369_176897_+	lipoprotein	NA	NA	NA	NA	NA
AZX13179.1|176988_177804_+	lipoprotein	NA	NA	NA	NA	NA
AZX13180.1|177864_178599_+	sulfurtransferase	NA	NA	NA	NA	NA
AZX13181.1|178636_180715_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZX13182.1|180964_181237_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13183.1|181335_182424_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZX13184.1|182427_184332_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AZX13185.1|184328_188003_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AZX13186.1|188063_188627_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZX13187.1|188634_189057_-	glyoxalase	NA	NA	NA	NA	NA
AZX13188.1|189084_189504_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AZX16440.1|189532_189979_-	N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AZX13189.1|190105_190603_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13190.1|190757_193028_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZX13191.1|193076_194309_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX13192.1|194407_195358_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13193.1|195403_196096_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AZX13194.1|196092_196986_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX13195.1|197380_198481_+	aminomethyltransferase	NA	NA	NA	NA	NA
AZX13196.1|198562_198937_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZX13197.1|198996_201861_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZX13198.1|202005_202746_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13199.1|202815_204027_+	CoA transferase	NA	NA	NA	NA	NA
AZX13200.1|204055_205024_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13201.1|205637_206588_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13202.1|206744_207068_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AZX13203.1|207172_208222_-	cyclase	NA	NA	NA	NA	NA
AZX13204.1|208218_209043_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AZX13205.1|209043_209340_-	YciI family protein	NA	NA	NA	NA	NA
AZX13206.1|209365_209641_-	muconolactone delta-isomerase	NA	NA	NA	NA	NA
AZX13207.1|209697_210342_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX13208.1|210341_211028_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX16441.1|211157_212009_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13209.1|212059_212785_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX13210.1|212816_214166_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZX13211.1|214277_215210_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX13212.1|215667_218463_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZX13213.1|219056_221999_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZX13214.1|222070_222790_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZX13215.1|222828_223377_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZX13216.1|223531_224431_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZX13217.1|224455_225406_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	233338	286926	4105484	transposase,protease,tRNA	Bacillus_phage(25.0%)	48	NA	NA
AZX13225.1|233338_234289_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13226.1|234375_235326_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13227.1|235322_236273_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13228.1|236371_237169_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX13229.1|238118_238529_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZX13230.1|239550_240294_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13231.1|240337_241381_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX13232.1|241551_243654_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13233.1|245064_246021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13234.1|246039_246531_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZX13235.1|246527_247883_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZX13236.1|247883_248582_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZX13237.1|248578_249280_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZX13238.1|249532_250582_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZX13239.1|250687_251629_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZX13240.1|251625_253515_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZX13241.1|253601_254240_+	hypothetical protein	NA	NA	NA	NA	NA
AZX16442.1|254382_255627_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZX13242.1|255698_256235_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZX13243.1|256386_257778_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZX13244.1|257794_258775_-	AEC family transporter	NA	NA	NA	NA	NA
AZX13245.1|258910_259894_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZX13246.1|259958_260858_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13247.1|260964_262719_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX13248.1|262726_263851_-	CoA transferase	NA	NA	NA	NA	NA
AZX13249.1|263864_264845_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13250.1|265575_266526_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13251.1|267085_267631_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13252.1|267714_269334_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX13253.1|269349_270504_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZX13254.1|270517_270643_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AZX13255.1|270639_272391_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZX13256.1|272387_274067_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZX13257.1|274102_274678_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AZX13258.1|275820_276099_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX13259.1|277142_278093_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13260.1|278079_278295_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13261.1|278370_278532_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZX13262.1|278539_278680_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13263.1|279198_279648_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZX13264.1|279657_280269_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX13265.1|280427_281282_-	cytochrome c1	NA	NA	NA	NA	NA
AZX13266.1|281301_282684_-	cytochrome b	NA	NA	NA	NA	NA
AZX13267.1|282748_283390_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZX13268.1|283529_283988_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AZX13269.1|284012_284789_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZX16443.1|284842_285979_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZX13270.1|285975_286926_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	401157	470501	4105484	transposase,tRNA	Heterosigma_akashiwo_virus(20.0%)	58	NA	NA
AZX13376.1|401157_402141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZX13377.1|402067_402769_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13378.1|402817_403588_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX13379.1|403584_404826_-	CoA transferase	NA	NA	NA	NA	NA
AZX13380.1|404930_406637_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZX13381.1|406633_407530_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13382.1|407570_409160_-	sulfurtransferase	NA	NA	NA	NA	NA
AZX13383.1|409209_410202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13384.1|410270_410870_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16450.1|411330_412308_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13385.1|412386_413337_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13386.1|413425_414340_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX13387.1|414336_414996_+	LysE family translocator	NA	NA	NA	NA	NA
AZX13388.1|415085_416009_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
AZX13389.1|416014_416470_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13390.1|416466_417570_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AZX16451.1|417489_417798_+	GtrA family protein	NA	NA	NA	NA	NA
AZX13391.1|417757_419377_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA	NA
AZX13392.1|419373_420432_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
AZX13393.1|420561_421056_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX13394.1|421148_422126_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13395.1|422321_423527_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AZX13396.1|423523_425035_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX16452.1|425050_426364_-	short-chain fatty acids transporter	NA	NA	NA	NA	NA
AZX13397.1|426554_426734_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13398.1|427143_427878_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AZX13399.1|430322_431273_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16453.1|431269_431677_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX13400.1|431673_432342_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX13401.1|432960_433932_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX16454.1|434038_435001_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13402.1|435119_436841_+	D-lactate dehydrogenase	NA	NA	NA	NA	NA
AZX13403.1|436884_438015_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX13404.1|438028_439219_-	pimeloyl-CoA dehydrogenase large subunit	NA	NA	NA	NA	NA
AZX13405.1|439399_440419_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX16455.1|440551_441724_-	acetylornithine deacetylase	NA	NA	NA	NA	NA
AZX13406.1|441716_442391_-	DUF1028 domain-containing protein	NA	NA	NA	NA	NA
AZX13407.1|442401_442830_-	RidA family protein	NA	NA	NA	NA	NA
AZX13408.1|442860_444135_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX13409.1|444499_445483_+	oxidoreductase	NA	NA	NA	NA	NA
AZX16456.1|445566_446511_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13410.1|446658_448800_-	CoA-binding protein	NA	NA	NA	NA	NA
AZX13411.1|448799_449579_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX13412.1|449977_450871_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX13413.1|450934_451954_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX16457.1|452010_452991_+	NAD(P)-dependent oxidoreductase	NA	M1IDV7	Acanthocystis_turfacea_Chlorella_virus	29.5	7.6e-11
AZX13414.1|453188_455021_-	glutamine--fructose-6-phosphate aminotransferase	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	48.1	4.3e-156
AZX13415.1|455170_455659_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX13416.1|455680_456898_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX13417.1|456894_459012_-	crotonase	NA	NA	NA	NA	NA
AZX13418.1|459269_461072_+	DNA alkylation response protein	NA	NA	NA	NA	NA
AZX13419.1|461153_462140_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13420.1|462191_464381_+	CoA-binding protein	NA	NA	NA	NA	NA
AZX13421.1|464377_465175_+	citryl-CoA lyase	NA	NA	NA	NA	NA
AZX13422.1|465171_466008_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX13423.1|466027_468403_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C	tRNA	NA	NA	NA	NA
AZX13424.1|468501_469452_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13425.1|469550_470501_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	707882	808346	4105484	transposase,terminase,tail,tRNA	uncultured_Caudovirales_phage(13.79%)	111	NA	NA
AZX13632.1|707882_708833_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13633.1|709531_709915_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13634.1|709972_710575_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
AZX16465.1|710592_710994_-	DoxX family protein	NA	NA	NA	NA	NA
AZX13635.1|711127_712021_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13636.1|712017_712599_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AZX13637.1|713393_714128_+	arginyltransferase	NA	NA	NA	NA	NA
AZX13638.1|714168_715218_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AZX13639.1|715365_715944_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AZX13640.1|716330_717308_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
AZX13641.1|717401_721796_-	dermonecrotic toxin	NA	NA	NA	NA	NA
AZX13642.1|721996_722845_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13643.1|723003_723816_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
AZX13644.1|723871_724822_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13645.1|724920_725721_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13646.1|725782_726166_+	thioredoxin	NA	NA	NA	NA	NA
AZX13647.1|726177_727611_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZX13648.1|727817_728147_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
AZX16466.1|728149_728818_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX13649.1|729081_730002_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AZX13650.1|730048_730261_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AZX13651.1|730283_730706_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZX13652.1|730722_731823_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX13653.1|731919_733437_-	peptidase	NA	NA	NA	NA	NA
AZX13654.1|733512_734352_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZX13655.1|734373_735255_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AZX13656.1|735336_736431_-	porin	NA	NA	NA	NA	NA
AZX13657.1|736724_737675_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16467.1|737749_738691_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13658.1|738774_739134_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13659.1|739515_740553_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13660.1|740869_742210_+	peptidase M24 family protein	NA	NA	NA	NA	NA
AZX13661.1|742219_742672_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13662.1|742768_743950_+	monooxygenase	NA	NA	NA	NA	NA
AZX13663.1|744009_745041_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZX13664.1|745081_745321_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX13665.1|745390_746980_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZX13666.1|746979_747528_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZX13667.1|747608_748181_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AZX13668.1|748199_749111_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AZX13669.1|749184_750153_-	threonine/serine dehydratase	NA	NA	NA	NA	NA
AZX13670.1|750275_751349_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZX13671.1|751353_753174_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZX13672.1|753250_754201_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13673.1|754289_754625_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AZX13674.1|754758_755409_+	carbonic anhydrase	NA	NA	NA	NA	NA
AZX13675.1|755430_756849_-	amidase	NA	NA	NA	NA	NA
AZX13676.1|756918_757674_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16468.1|757642_758401_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX13677.1|758411_759293_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX13678.1|759309_760017_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZX13679.1|760019_760778_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZX13680.1|760987_762730_+	sulfite reductase	NA	NA	NA	NA	NA
AZX13681.1|762722_763247_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AZX13682.1|763286_764081_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX13683.1|764248_765322_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13684.1|765420_766371_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13685.1|766622_766835_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16469.1|766900_767512_-	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZX13686.1|767991_768312_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13687.1|768304_769003_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13688.1|769017_769239_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13689.1|769256_770207_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16470.1|770882_771332_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZX13690.1|771318_772596_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZX13691.1|772598_774017_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZX16471.1|774045_775101_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZX13692.1|775106_775349_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZX13693.1|775471_776074_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZX13694.1|776502_777453_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13695.1|777470_778118_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZX13696.1|778127_778379_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13697.1|778441_778924_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZX13698.1|778925_779126_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13699.1|779125_779521_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZX13700.1|779517_779916_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZX13701.1|779912_780335_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13702.1|780342_780843_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZX13703.1|781097_781616_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZX13704.1|781625_781955_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZX13705.1|781972_782263_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZX13706.1|782288_784901_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZX13707.1|784910_785270_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13708.1|785337_785871_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZX13709.1|785867_786257_+	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZX13710.1|786249_790206_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AZX13711.1|790210_790627_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13712.1|790845_791109_+	hypothetical protein	NA	A0A1B0V3F2	Roseobacter_phage	41.8	7.2e-09
AZX13713.1|791108_791921_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13714.1|791925_792168_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13715.1|792146_792698_+	lysozyme	NA	NA	NA	NA	NA
AZX13716.1|792679_793213_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AZX13717.1|793209_793491_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13718.1|793833_794034_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13719.1|794040_794712_-	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZX13720.1|795067_795754_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX13721.1|795734_796307_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZX13722.1|796372_798103_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZX13723.1|798155_798584_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZX13724.1|798586_799267_+	protein TolQ	NA	NA	NA	NA	NA
AZX13725.1|799266_799725_+	protein TolR	NA	NA	NA	NA	NA
AZX13726.1|799761_800736_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AZX13727.1|800752_802069_+	protein TolB	NA	NA	NA	NA	NA
AZX13728.1|802100_802598_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AZX13729.1|802684_803374_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZX13730.1|803373_804423_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX13731.1|804419_805214_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZX13732.1|805382_805733_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13733.1|805708_806266_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13734.1|807190_807409_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13735.1|807395_808346_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	823033	851351	4105484	transposase	Planktothrix_phage(100.0%)	24	NA	NA
AZX13745.1|823033_823984_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13746.1|824143_825016_-	carboxyvinyl-carboxyphosphonate phosphorylmutase	NA	NA	NA	NA	NA
AZX13747.1|825356_825575_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
AZX13748.1|825614_826994_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
AZX13749.1|827035_828433_-	amidase	NA	NA	NA	NA	NA
AZX13750.1|828472_830125_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
AZX13751.1|830128_831013_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX13752.1|831012_831954_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX13753.1|832032_833652_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX13754.1|833818_834634_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13755.1|834701_835271_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13756.1|835271_836222_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13757.1|836876_837974_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZX13758.1|838007_839273_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AZX13759.1|839430_840381_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13760.1|840479_841430_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13761.1|841673_842264_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZX16473.1|842279_844724_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX13762.1|844843_845815_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13763.1|845946_846471_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZX13764.1|846430_847381_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13765.1|847602_849798_-	DNA methylase	NA	NA	NA	NA	NA
AZX13766.1|849870_850278_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX13767.1|850400_851351_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	902944	951966	4105484	transposase,holin	Acinetobacter_phage(25.0%)	44	NA	NA
AZX13807.1|902944_903895_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13808.1|903993_904944_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13809.1|905042_905699_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX13810.1|905846_908555_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
AZX13811.1|908564_909584_+	fructose 1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
AZX13812.1|909580_910531_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13813.1|910629_911118_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AZX13814.1|911114_911798_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AZX13815.1|911827_915283_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
AZX13816.1|915318_916179_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
AZX13817.1|916307_917225_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13818.1|917362_918343_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13819.1|918402_920193_+	acetolactate synthase catalytic subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	26.1	2.0e-25
AZX13820.1|920189_920966_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX13821.1|920975_921494_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX13822.1|921606_923877_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX13823.1|924088_926320_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX13824.1|926620_926950_-	DUF2818 domain-containing protein	NA	NA	NA	NA	NA
AZX13825.1|926966_928451_-	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA	NA
AZX13826.1|928461_929964_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
AZX13827.1|929960_931973_-	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
AZX13828.1|931990_932299_-	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA	NA
AZX13829.1|932295_932943_-	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA	NA
AZX13830.1|932960_933449_-	NADH-quinone oxidoreductase subunit I	NA	NA	NA	NA	NA
AZX13831.1|933470_934544_-	NADH-quinone oxidoreductase subunit H	NA	NA	NA	NA	NA
AZX13832.1|934543_936871_-	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA	NA
AZX13833.1|936886_938254_-	NADH oxidoreductase (quinone) subunit F	NA	NA	NA	NA	NA
AZX13834.1|938250_938745_-	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA	NA
AZX13835.1|938790_940047_-	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA	NA
AZX13836.1|940049_940697_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA	NA
AZX13837.1|940747_941224_-	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA	NA
AZX13838.1|941260_941620_-	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA	NA
AZX13839.1|941808_942966_-	porin	NA	NA	NA	NA	NA
AZX13840.1|943088_943292_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13841.1|943278_944229_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16476.1|944201_944801_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13842.1|944802_945237_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX13843.1|945233_945668_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13844.1|945651_946455_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AZX13845.1|946471_947287_-	DNA repair exonuclease	NA	NA	NA	NA	NA
AZX13846.1|947283_948099_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AZX13847.1|948245_948947_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13848.1|948974_950933_-|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AZX13849.1|951015_951966_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	974989	1028507	4105484	transposase,holin	Acidithiobacillus_phage(33.33%)	46	NA	NA
AZX16478.1|974989_976006_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX13866.1|976202_977186_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13867.1|978784_980173_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX13868.1|980203_981193_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13869.1|981303_982536_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX13870.1|982817_983618_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13871.1|983640_985872_-|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZX13872.1|986659_987106_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZX13873.1|987127_987874_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZX13874.1|988017_988995_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZX13875.1|989628_990240_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZX13876.1|990233_991451_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZX13877.1|991591_992542_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13878.1|992538_993258_-	lipoprotein	NA	NA	NA	NA	NA
AZX13879.1|993378_995538_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
AZX13880.1|995628_995898_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
AZX16479.1|995986_996193_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13881.1|996191_996719_+	lipoprotein	NA	NA	NA	NA	NA
AZX13882.1|996737_997517_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AZX13883.1|997684_998701_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AZX13884.1|998773_999265_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AZX13885.1|999275_1000991_-	acetolactate synthase, large subunit, biosynthetic type	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
AZX13886.1|1002154_1003105_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13887.1|1003101_1004952_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AZX13888.1|1005332_1005992_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AZX13889.1|1006079_1006232_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13890.1|1006340_1006508_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13891.1|1006519_1007200_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AZX13892.1|1007481_1008198_+	flagellar brake protein	NA	NA	NA	NA	NA
AZX13893.1|1008212_1009514_-	phospholipase	NA	NA	NA	NA	NA
AZX13894.1|1011658_1014547_+	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
AZX13895.1|1014770_1016123_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX13896.1|1016151_1016673_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AZX13897.1|1016669_1018124_+	carboxylase	NA	NA	NA	NA	NA
AZX13898.1|1018158_1018407_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13899.1|1018512_1019388_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13900.1|1019413_1020469_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13901.1|1020481_1021273_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13902.1|1021305_1022676_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AZX13903.1|1023852_1024803_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13904.1|1024855_1025077_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13905.1|1025236_1025449_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13906.1|1025568_1026687_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZX13907.1|1026783_1026999_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13908.1|1027192_1027444_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13909.1|1027556_1028507_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	1042014	1114508	4105484	transposase	Bacillus_virus(16.67%)	59	NA	NA
AZX13920.1|1042014_1042965_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13921.1|1042961_1043936_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX13922.1|1044060_1044972_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AZX16481.1|1045248_1045641_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZX13923.1|1045770_1046721_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13924.1|1046750_1046933_-	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZX13925.1|1046971_1047229_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13926.1|1047705_1048887_-	MFS transporter	NA	NA	NA	NA	NA
AZX13927.1|1049102_1049780_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX13928.1|1049776_1050550_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AZX13929.1|1050627_1051209_-	OmpA family protein	NA	NA	NA	NA	NA
AZX13930.1|1051579_1054261_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZX13931.1|1054260_1055394_+	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AZX13932.1|1055386_1056472_+	prephenate dehydratase	NA	NA	NA	NA	NA
AZX13933.1|1056558_1057458_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AZX13934.1|1057454_1058783_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZX13935.1|1058797_1059469_+	cytidylate kinase	NA	NA	NA	NA	NA
AZX13936.1|1059641_1061372_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZX13937.1|1061373_1061733_+	integration host factor subunit beta	NA	NA	NA	NA	NA
AZX13938.1|1061924_1062239_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AZX13939.1|1062281_1063502_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZX13940.1|1063498_1064440_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZX13941.1|1064436_1065426_+	ADP-L-glycero-D-mannoheptose-6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZX13942.1|1065460_1066045_+	DUF655 domain-containing protein	NA	NA	NA	NA	NA
AZX13943.1|1066143_1067094_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13944.1|1067174_1068086_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
AZX13945.1|1068146_1069292_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AZX13946.1|1069311_1070226_+	deacetylase	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
AZX13947.1|1070297_1071047_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
AZX13948.1|1071046_1071976_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
AZX13949.1|1072219_1074046_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX13950.1|1074128_1074770_+	peroxiredoxin	NA	NA	NA	NA	NA
AZX13951.1|1074959_1075994_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX13952.1|1077830_1078895_+	sulfate/thiosulfate import ATP-binding protein CysA	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
AZX16482.1|1079692_1080601_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
AZX13953.1|1082088_1083363_+	radical SAM protein	NA	NA	NA	NA	NA
AZX13954.1|1083516_1083897_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13955.1|1083904_1084777_-	multidrug DMT transporter permease	NA	NA	NA	NA	NA
AZX13956.1|1085082_1085463_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AZX13957.1|1085673_1086399_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
AZX13958.1|1086494_1087445_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13959.1|1087549_1088599_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AZX16483.1|1088736_1089753_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX13960.1|1091261_1091834_-	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AZX13961.1|1091893_1092625_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AZX16484.1|1092676_1093594_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13962.1|1094401_1097581_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX13963.1|1097577_1098960_+	multidrug transporter	NA	NA	NA	NA	NA
AZX13964.1|1099029_1099281_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZX13965.1|1099426_1100077_-	SCO family protein	NA	NA	NA	NA	NA
AZX13966.1|1100227_1102342_-	M3 family peptidase	NA	NA	NA	NA	NA
AZX13967.1|1102417_1103269_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AZX13968.1|1103265_1103892_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX13969.1|1103888_1105643_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AZX13970.1|1105935_1108641_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AZX13971.1|1108653_1110315_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AZX13972.1|1110327_1112118_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AZX13973.1|1112339_1113515_-	flagellin FliC	NA	NA	NA	NA	NA
AZX13974.1|1113557_1114508_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	1126115	1175053	4105484	transposase,holin,tRNA	uncultured_Mediterranean_phage(37.5%)	45	NA	NA
AZX13983.1|1126115_1127249_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13984.1|1127525_1128074_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZX13985.1|1128092_1128578_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX13986.1|1128755_1129694_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZX13987.1|1129696_1130014_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX13988.1|1130059_1131004_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13989.1|1132684_1133335_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZX13990.1|1133388_1133724_+	hypothetical protein	NA	NA	NA	NA	NA
AZX13991.1|1133720_1134581_+	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZX13992.1|1134597_1134879_-	hypothetical protein	NA	NA	NA	NA	NA
AZX13993.1|1134952_1135216_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZX13994.1|1135459_1136410_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX13995.1|1136708_1137446_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZX13996.1|1137881_1138205_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZX13997.1|1138239_1138800_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZX13998.1|1138920_1139796_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZX13999.1|1139808_1140756_+	motility protein MotB	NA	NA	NA	NA	NA
AZX14000.1|1140857_1141151_+	response regulator	NA	NA	NA	NA	NA
AZX14001.1|1141177_1143235_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZX14002.1|1143249_1143750_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZX14003.1|1143823_1145530_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZX14004.1|1146393_1147446_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZX14005.1|1147498_1147888_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZX14006.1|1147896_1148529_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZX16486.1|1148628_1149645_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX16487.1|1150475_1151483_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZX14007.1|1151479_1153123_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AZX14008.1|1153119_1154022_-	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
AZX14009.1|1154147_1154621_-	endoribonuclease YbeY	NA	NA	NA	NA	NA
AZX14010.1|1154610_1155633_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
AZX14011.1|1155629_1157057_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZX16488.1|1157994_1159011_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX14012.1|1159343_1160279_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZX14013.1|1160328_1162209_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AZX14014.1|1162275_1162620_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZX14015.1|1162764_1163901_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZX14016.1|1163897_1164971_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AZX14017.1|1165128_1166565_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZX16489.1|1166655_1167297_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX16490.1|1167632_1168649_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX14018.1|1168981_1171729_+	pertactin autotransporter	NA	NA	NA	NA	NA
AZX16491.1|1171795_1173217_-	siroheme synthase	NA	NA	NA	NA	NA
AZX14019.1|1173480_1174197_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14020.1|1174281_1174599_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AZX14021.1|1174639_1175053_+|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 11
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	1184121	1265398	4105484	transposase,tRNA	Planktothrix_phage(16.67%)	59	NA	NA
AZX14029.1|1184121_1185072_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16492.1|1185439_1186216_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZX14030.1|1186260_1187118_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZX14031.1|1187139_1188156_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZX14032.1|1188290_1189331_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZX14033.1|1189525_1191607_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZX14034.1|1191842_1193336_+	exopolyphosphatase	NA	NA	NA	NA	NA
AZX14035.1|1193566_1194361_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX14036.1|1194581_1195940_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZX14037.1|1195936_1196779_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZX14038.1|1196797_1198684_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZX14039.1|1198921_1199554_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA	NA
AZX14040.1|1199572_1200175_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14041.1|1200326_1201277_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14042.1|1202079_1202880_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14043.1|1202923_1203910_-	homoserine kinase	NA	NA	NA	NA	NA
AZX14044.1|1204049_1205063_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZX14045.1|1205059_1206010_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14046.1|1206122_1206581_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AZX14047.1|1206617_1207931_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14048.1|1207948_1208320_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AZX14049.1|1208316_1209780_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AZX14050.1|1209872_1210649_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX14051.1|1210630_1213510_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AZX14052.1|1213692_1214643_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14053.1|1214810_1215635_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AZX14054.1|1215634_1216513_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX14055.1|1217417_1218533_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX14056.1|1218540_1219356_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AZX14057.1|1219352_1221218_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AZX14058.1|1221296_1221929_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14059.1|1221925_1222228_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14060.1|1222270_1223791_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
AZX14061.1|1223797_1224553_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX14062.1|1224582_1225687_-	peptide chain release factor 2	NA	NA	NA	NA	NA
AZX16493.1|1225789_1227490_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
AZX14063.1|1227471_1228449_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14064.1|1228458_1229739_+	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA	NA
AZX14065.1|1229731_1230427_+	lipoprotein-releasing system ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
AZX14066.1|1230460_1231288_+	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZX14067.1|1231569_1234800_+	autotransporter SphB3	NA	NA	NA	NA	NA
AZX14068.1|1235068_1235245_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14069.1|1235535_1239462_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZX14070.1|1241361_1243158_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14071.1|1243157_1244126_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX14072.1|1244195_1245041_+	PHP domain-containing protein	NA	NA	NA	NA	NA
AZX14073.1|1245108_1245663_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
AZX14074.1|1245709_1246660_-|transposase	IS481 family transposase IS481v2	transposase	NA	NA	NA	NA
AZX14075.1|1246758_1247391_-	fimbrial protein	NA	NA	NA	NA	NA
AZX14076.1|1247555_1249838_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZX14077.1|1249992_1252689_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
AZX14078.1|1252814_1253303_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX14079.1|1255713_1258584_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
AZX14080.1|1258629_1259844_+	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
AZX14081.1|1260073_1261501_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
AZX14082.1|1261541_1262690_+	cell division protein ZapE	NA	NA	NA	NA	NA
AZX14083.1|1262702_1263461_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX14084.1|1263548_1264451_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14085.1|1264447_1265398_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	1406081	1474568	4105484	transposase	Planktothrix_phage(33.33%)	58	NA	NA
AZX14202.1|1406081_1407032_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14203.1|1407800_1408439_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX16503.1|1409328_1409775_+	glutamate racemase	NA	NA	NA	NA	NA
AZX14204.1|1409856_1410558_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
AZX14205.1|1410558_1411326_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
AZX14206.1|1411322_1412561_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AZX14207.1|1412560_1413487_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AZX14208.1|1413589_1414705_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX14209.1|1414720_1415671_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14210.1|1416024_1416606_-	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
AZX14211.1|1416602_1417436_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AZX16504.1|1417646_1418960_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
AZX14212.1|1419136_1420018_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
AZX14213.1|1420037_1420889_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
AZX14214.1|1420941_1422030_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
AZX14215.1|1422140_1423268_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX16505.1|1423502_1424114_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX14216.1|1424212_1425163_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14217.1|1425384_1425762_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AZX16506.1|1425909_1426407_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AZX14218.1|1426403_1426931_+	RES domain-containing protein	NA	NA	NA	NA	NA
AZX14219.1|1427064_1427880_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX14220.1|1427892_1429074_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX14221.1|1429121_1430015_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
AZX16507.1|1430141_1430612_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14222.1|1430737_1431565_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
AZX14223.1|1431593_1432370_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AZX14224.1|1432366_1432660_-	biotin--protein ligase	NA	NA	NA	NA	NA
AZX14225.1|1432656_1433121_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX14226.1|1433132_1433918_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
AZX14227.1|1433943_1434444_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
AZX14228.1|1434526_1435705_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
AZX14229.1|1437332_1437668_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AZX14230.1|1437855_1439304_+	CoA transferase	NA	NA	NA	NA	NA
AZX16508.1|1439361_1439706_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
AZX14231.1|1439812_1440352_-	peroxiredoxin	NA	NA	NA	NA	NA
AZX14232.1|1440444_1441395_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14233.1|1441381_1441864_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14234.1|1442133_1442565_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14235.1|1442746_1443151_-	DoxX family protein	NA	NA	NA	NA	NA
AZX14236.1|1444387_1444711_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14237.1|1444713_1445601_-	aldo/keto reductase	NA	NA	NA	NA	NA
AZX14238.1|1445633_1446059_-	universal stress protein	NA	NA	NA	NA	NA
AZX14239.1|1446130_1446484_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14240.1|1446723_1447230_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14241.1|1447268_1448600_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
AZX14242.1|1448659_1449475_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AZX14243.1|1449471_1450326_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
AZX16509.1|1453388_1455932_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
AZX14244.1|1457298_1459053_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
AZX14245.1|1459049_1461170_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
AZX14246.1|1461174_1463370_-	1,4-alpha-glucan-branching protein	NA	NA	NA	NA	NA
AZX16510.1|1463366_1466708_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
AZX14247.1|1469510_1470461_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14248.1|1470526_1470706_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16511.1|1470822_1471545_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX14249.1|1471564_1472710_-	DUF3182 domain-containing protein	NA	NA	NA	NA	NA
AZX14250.1|1473617_1474568_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	1535059	1590547	4105484	transposase,protease	Mollivirus(16.67%)	56	NA	NA
AZX14297.1|1535059_1536010_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14298.1|1537211_1537658_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
AZX14299.1|1537650_1539126_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
AZX14300.1|1539122_1539878_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
AZX14301.1|1539870_1540881_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
AZX14302.1|1540870_1542547_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
AZX14303.1|1542859_1543192_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
AZX14304.1|1543205_1543601_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14305.1|1543610_1543937_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
AZX14306.1|1543933_1544260_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZX14307.1|1544186_1545209_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZX14308.1|1545205_1545586_-	flagellar protein FliT	NA	NA	NA	NA	NA
AZX14309.1|1545603_1546032_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
AZX14310.1|1546039_1547413_-	flagellar hook protein FliD	NA	NA	NA	NA	NA
AZX16516.1|1547553_1547931_-	flagellar protein	NA	NA	NA	NA	NA
AZX14311.1|1548193_1549501_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AZX14312.1|1549561_1550392_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX14313.1|1550388_1550877_+	colicin V synthesis protein	NA	NA	NA	NA	NA
AZX14314.1|1550918_1552439_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
AZX16517.1|1552482_1552959_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AZX14315.1|1553762_1556360_-	bifunctional uridylyltransferase/uridylyl-removing protein	NA	NA	NA	NA	NA
AZX14316.1|1556389_1557211_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
AZX14317.1|1557937_1558687_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
AZX14318.1|1558819_1559749_+	elongation factor Ts	NA	NA	NA	NA	NA
AZX14319.1|1559846_1560563_+	UMP kinase	NA	NA	NA	NA	NA
AZX14320.1|1560577_1561138_+	ribosome-recycling factor	NA	NA	NA	NA	NA
AZX14321.1|1561175_1562069_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	2.0e-18
AZX14322.1|1562088_1562946_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AZX14323.1|1562942_1564142_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AZX14324.1|1564181_1565516_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
AZX14325.1|1565568_1567905_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AZX16518.1|1568030_1568594_+	outer membrane protein chaperone	NA	NA	NA	NA	NA
AZX14326.1|1568602_1569694_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZX14327.1|1569765_1570221_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZX14328.1|1570221_1571016_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZX14329.1|1571012_1572194_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZX14330.1|1572180_1572786_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
AZX14331.1|1572782_1573556_+	RNA methyltransferase	NA	NA	NA	NA	NA
AZX14332.1|1573567_1574395_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA	NA
AZX14333.1|1574556_1576920_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
AZX14334.1|1576987_1577707_-	GMP synthase	NA	NA	NA	NA	NA
AZX14335.1|1577830_1578256_+	NfeD-like family protein 1	NA	NA	NA	NA	NA
AZX14336.1|1578290_1579241_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14337.1|1579358_1580285_+	paraslipin	NA	NA	NA	NA	NA
AZX14338.1|1580350_1581508_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AZX14339.1|1581488_1581956_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AZX14340.1|1582103_1583054_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14341.1|1583070_1583505_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AZX14342.1|1583494_1583845_+	RnfH family protein	NA	NA	NA	NA	NA
AZX14343.1|1584041_1585196_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX14344.1|1585192_1586365_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX14345.1|1586412_1587306_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX14346.1|1587351_1587789_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX14347.1|1587848_1588538_+	VIT family protein	NA	NA	NA	NA	NA
AZX14348.1|1588547_1589498_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14349.1|1589596_1590547_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	1883117	1931133	4105484	transposase,tRNA	Moraxella_phage(16.67%)	44	NA	NA
AZX14594.1|1883117_1884068_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14595.1|1884166_1886767_-	DUF3394 domain-containing protein	NA	NA	NA	NA	NA
AZX14596.1|1886873_1887878_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX14597.1|1887986_1889327_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
AZX14598.1|1889367_1890396_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14599.1|1890591_1891137_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14600.1|1891133_1891694_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
AZX14601.1|1891792_1892743_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14602.1|1892780_1893368_+	DUF1949 domain-containing protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
AZX14603.1|1893385_1893769_-	thioredoxin	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
AZX14604.1|1895128_1896421_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
AZX14605.1|1896555_1897596_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
AZX16530.1|1897693_1898710_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX14606.1|1898977_1899625_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX14607.1|1899750_1900509_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
AZX16531.1|1900583_1901273_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
AZX14608.1|1901290_1902175_+	peptidase	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
AZX14609.1|1902171_1902951_+	3'-5' exonuclease	NA	NA	NA	NA	NA
AZX14610.1|1902977_1903655_+	hypothetical protein	NA	NA	NA	NA	NA
AZX16532.1|1903943_1904696_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14611.1|1904814_1906215_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
AZX14612.1|1906238_1906637_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZX14613.1|1906812_1907013_+	copper chaperone	NA	NA	NA	NA	NA
AZX14614.1|1907151_1907880_+	glutaredoxin	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
AZX14615.1|1908013_1909429_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
AZX14616.1|1909432_1910296_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AZX14617.1|1910308_1911058_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
AZX14618.1|1911240_1913256_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZX16533.1|1913237_1913786_-	arylesterase	NA	NA	NA	NA	NA
AZX14619.1|1913862_1914582_+	ABC transporter	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
AZX14620.1|1914681_1915632_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14621.1|1915730_1916681_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14622.1|1916829_1917168_-	phospholipid-binding protein	NA	NA	NA	NA	NA
AZX14623.1|1917225_1917387_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AZX14624.1|1917418_1917619_-	CsbD family protein	NA	NA	NA	NA	NA
AZX14625.1|1917884_1920458_-	cyanophycin synthetase	NA	NA	NA	NA	NA
AZX14626.1|1920528_1923102_-	cyanophycin synthetase	NA	NA	NA	NA	NA
AZX14627.1|1925628_1926117_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
AZX14628.1|1926208_1927360_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX14629.1|1927413_1928235_+	DUF455 domain-containing protein	NA	NA	NA	NA	NA
AZX14630.1|1928273_1929503_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
AZX14631.1|1929631_1930072_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
AZX14632.1|1930016_1930196_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14633.1|1930182_1931133_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	1934526	1995731	4105484	transposase,protease,tRNA	Lake_Baikal_phage(21.43%)	53	NA	NA
AZX14638.1|1934526_1937388_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
AZX14639.1|1937377_1938343_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
AZX14640.1|1938402_1940397_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
AZX14641.1|1940495_1941446_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14642.1|1941442_1941817_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14643.1|1942078_1943287_+	acyl-CoA desaturase	NA	NA	NA	NA	NA
AZX14644.1|1943283_1945584_+	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AZX14645.1|1945636_1948249_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX14646.1|1948608_1950534_-	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AZX14647.1|1950530_1951427_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AZX14648.1|1951433_1952573_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AZX14649.1|1952572_1953394_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AZX14650.1|1954964_1955294_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX14651.1|1955676_1956933_+	autotransporter Phg	NA	NA	NA	NA	NA
AZX14652.1|1957007_1957289_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14653.1|1957330_1957651_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14654.1|1957957_1958161_+	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AZX14655.1|1958244_1958811_+	DUF924 domain-containing protein	NA	NA	NA	NA	NA
AZX14656.1|1959156_1959357_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AZX14657.1|1959468_1960047_-	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AZX14658.1|1960225_1961536_+	trigger factor	NA	NA	NA	NA	NA
AZX14659.1|1961538_1962192_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AZX14660.1|1962296_1963601_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AZX14661.1|1963789_1966243_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AZX14662.1|1966366_1967317_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14663.1|1967544_1968768_+	CoA transferase	NA	NA	NA	NA	NA
AZX14664.1|1968833_1969805_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX14665.1|1969817_1970273_+	MaoC family dehydratase	NA	NA	NA	NA	NA
AZX14666.1|1970286_1971090_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX14667.1|1971086_1971518_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14668.1|1971514_1972672_+	thiolase	NA	NA	NA	NA	NA
AZX14669.1|1972693_1973470_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX14670.1|1975634_1976351_+	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX14671.1|1976343_1976985_+	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX14672.1|1977019_1977751_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14673.1|1977768_1977981_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14674.1|1978551_1979502_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14675.1|1981059_1981788_-	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
AZX14676.1|1981838_1983041_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZX14677.1|1983118_1985155_+	UvrABC system protein B	NA	NA	NA	NA	NA
AZX14678.1|1985407_1985899_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AZX14679.1|1986114_1986627_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AZX14680.1|1986644_1987856_+	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AZX14681.1|1987893_1988304_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AZX14682.1|1988305_1988629_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AZX14683.1|1988631_1989144_+	co-chaperone protein HscB	NA	NA	NA	NA	NA
AZX14684.1|1989273_1991136_+	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AZX14685.1|1991145_1991487_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AZX14686.1|1991486_1991681_+	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AZX14687.1|1991805_1992699_+	methylglyoxal synthase	NA	NA	NA	NA	NA
AZX14688.1|1992695_1993646_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14689.1|1993770_1994580_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX14690.1|1994780_1995731_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2023514	2064205	4105484	transposase,protease,tRNA	Klosneuvirus(25.0%)	36	NA	NA
AZX14710.1|2023514_2026139_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
AZX14711.1|2026125_2026380_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
AZX14712.1|2026446_2027028_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14713.1|2027331_2027592_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AZX14714.1|2027757_2028381_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AZX14715.1|2028380_2029154_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AZX14716.1|2029150_2030359_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AZX14717.1|2030384_2030858_-	RidA family protein	NA	NA	NA	NA	NA
AZX14718.1|2030931_2031882_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14719.1|2031980_2032931_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14720.1|2033029_2034379_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZX14721.1|2035144_2035900_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
AZX14722.1|2035992_2038875_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
AZX14723.1|2039197_2039623_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
AZX14724.1|2039650_2040799_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AZX14725.1|2040795_2041302_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX14726.1|2041308_2042604_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AZX14727.1|2042644_2043949_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX14728.1|2043950_2044589_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14729.1|2044591_2045752_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AZX14730.1|2045778_2047134_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AZX14731.1|2047137_2048208_+	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AZX14732.1|2048346_2048583_+	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AZX14733.1|2048670_2049777_+	GTPase HflX	NA	NA	NA	NA	NA
AZX14734.1|2049742_2051047_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AZX14735.1|2051065_2051965_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
AZX14736.1|2052148_2053306_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AZX14737.1|2053370_2054678_+	adenylosuccinate synthetase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
AZX14738.1|2054791_2055331_+	phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX14739.1|2055608_2055821_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
AZX14740.1|2055840_2057871_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
AZX16535.1|2058670_2060839_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
AZX14741.1|2061248_2061548_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14742.1|2061832_2062246_+	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
AZX14743.1|2062205_2063156_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14744.1|2063254_2064205_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2075409	2123766	4105484	transposase	Klosneuvirus(16.67%)	44	NA	NA
AZX14758.1|2075409_2076360_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14759.1|2076356_2077631_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AZX14760.1|2077728_2078928_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AZX14761.1|2078924_2079578_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX14762.1|2079574_2081011_+	dethiobiotin synthase	NA	NA	NA	NA	NA
AZX14763.1|2080998_2081358_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
AZX14764.1|2082330_2083281_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14765.1|2084326_2086192_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX16537.1|2086449_2087970_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZX14766.1|2088057_2088708_-	flavodoxin family protein	NA	NA	NA	NA	NA
AZX14767.1|2089656_2090952_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AZX14768.1|2090973_2091858_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX16538.1|2091956_2092832_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZX14769.1|2092821_2093178_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
AZX14770.1|2093251_2094283_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX14771.1|2094412_2094592_-	DUF3008 domain-containing protein	NA	NA	NA	NA	NA
AZX14772.1|2094689_2095214_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
AZX14773.1|2095224_2096061_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX14774.1|2096173_2096545_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX14775.1|2096541_2097093_+	ATPase	NA	NA	NA	NA	NA
AZX14776.1|2097108_2098800_-	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AZX14777.1|2098848_2099529_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14778.1|2099776_2100241_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14779.1|2100410_2101340_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX14780.1|2101352_2102000_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14781.1|2102073_2103891_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AZX14782.1|2103974_2104925_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14783.1|2105577_2106528_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14784.1|2106546_2106894_-	GFA family protein	NA	NA	NA	NA	NA
AZX14785.1|2106922_2108362_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.6	9.7e-55
AZX14786.1|2108380_2108776_-	VOC family protein	NA	NA	NA	NA	NA
AZX14787.1|2108950_2109559_+	peptidase S16	NA	NA	NA	NA	NA
AZX14788.1|2109571_2110390_+	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
AZX14789.1|2110341_2111316_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX14790.1|2111344_2112406_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14791.1|2112402_2114619_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZX14792.1|2114632_2115091_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AZX14793.1|2115248_2115593_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14794.1|2115749_2116655_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX16539.1|2116741_2117755_+	flavin-nucleotide-binding protein	NA	NA	NA	NA	NA
AZX16540.1|2119734_2120751_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX14795.1|2120893_2122246_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AZX14796.1|2122420_2122717_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14797.1|2122815_2123766_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2135262	2199631	4105484	transposase	Vibrio_phage(20.0%)	52	NA	NA
AZX14811.1|2135262_2136213_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14812.1|2136199_2136391_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14813.1|2136434_2137385_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14814.1|2137483_2138449_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX14815.1|2138586_2139486_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14816.1|2142080_2143568_+	hypothetical protein	NA	NA	NA	NA	NA
AZX14817.1|2143578_2144775_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZX14818.1|2144847_2146167_+	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AZX14819.1|2146163_2147039_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX14820.1|2147069_2148239_-	CoA transferase	NA	NA	NA	NA	NA
AZX14821.1|2148235_2148550_-	ferredoxin	NA	NA	NA	NA	NA
AZX14822.1|2148571_2149294_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX14823.1|2149293_2150112_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX14824.1|2150116_2150644_-	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
AZX14825.1|2150649_2151915_-	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA	NA
AZX14826.1|2152264_2153404_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX14827.1|2153481_2154354_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX14828.1|2155224_2156175_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14829.1|2156134_2156770_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14830.1|2157129_2158452_-	isocitrate lyase	NA	NA	NA	NA	NA
AZX14831.1|2158680_2159592_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
AZX14832.1|2161016_2161589_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AZX14833.1|2161628_2163458_-	UvrABC system protein C	NA	NA	NA	NA	NA
AZX14834.1|2163420_2164479_-	beta-hexosaminidase	NA	NA	NA	NA	NA
AZX14835.1|2164516_2164978_-	holo-ACP synthase	NA	NA	NA	NA	NA
AZX14836.1|2165062_2165809_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AZX14837.1|2167299_2170530_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX14838.1|2170596_2171928_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX14839.1|2172180_2172555_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX14840.1|2172657_2173836_-	hypothetical protein	NA	NA	NA	NA	NA
AZX14841.1|2173846_2174437_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX16542.1|2174547_2175354_+	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA	NA
AZX14842.1|2175379_2176174_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
AZX14843.1|2177174_2178149_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX14844.1|2178307_2178820_-	superoxide dismutase [Cu-Zn] SodC1	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
AZX14845.1|2178976_2179948_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX14846.1|2181692_2182499_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX16543.1|2182495_2183632_-	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
AZX14847.1|2183747_2184512_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14848.1|2184625_2185396_-	spermidine synthase	NA	NA	NA	NA	NA
AZX14849.1|2185480_2186692_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX14850.1|2186740_2187115_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AZX14851.1|2187215_2188478_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
AZX14852.1|2188474_2189332_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX14853.1|2189504_2190506_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX14854.1|2190957_2191908_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14855.1|2193423_2194623_+	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA	NA
AZX14856.1|2194991_2195228_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
AZX14857.1|2195291_2195459_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
AZX14858.1|2195572_2197468_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
AZX14859.1|2197631_2198582_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14860.1|2198680_2199631_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2386099	2447447	4105484	transposase,tRNA	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
AZX14997.1|2386099_2387050_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX14998.1|2387166_2387886_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX14999.1|2388058_2389045_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15000.1|2389045_2389528_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AZX15001.1|2389531_2390815_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX15002.1|2390811_2391750_+	CoA ester lyase	NA	NA	NA	NA	NA
AZX15003.1|2391746_2393456_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
AZX15004.1|2393465_2394713_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZX15005.1|2396323_2397613_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
AZX15006.1|2398750_2399524_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
AZX15007.1|2400185_2400929_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15008.1|2401003_2401744_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15009.1|2401939_2402776_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15010.1|2402826_2403597_-	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZX15011.1|2403646_2404699_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AZX15012.1|2404695_2405322_-	thymidylate kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
AZX15013.1|2405318_2406365_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
AZX15014.1|2406531_2407548_+	folate-binding protein	NA	NA	NA	NA	NA
AZX16552.1|2407646_2408597_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15015.1|2411337_2412627_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZX15016.1|2412745_2413216_-	DNA-binding protein	NA	NA	NA	NA	NA
AZX15017.1|2413226_2414435_-	flavohemoprotein	NA	NA	NA	NA	NA
AZX15018.1|2414581_2415046_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
AZX15019.1|2415069_2416020_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15020.1|2417004_2417778_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX15021.1|2417774_2418773_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15022.1|2418857_2419634_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
AZX15023.1|2419789_2421457_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.6e-53
AZX15024.1|2421774_2422899_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15025.1|2423025_2423649_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15026.1|2423645_2425547_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX15027.1|2425595_2426390_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX15028.1|2426402_2427404_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
AZX15029.1|2427400_2427907_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
AZX15030.1|2427899_2428748_-	hydrolase	NA	NA	NA	NA	NA
AZX15031.1|2428845_2429388_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15032.1|2429431_2430382_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15033.1|2430537_2430864_-	cation:proton antiporter	NA	NA	NA	NA	NA
AZX15034.1|2430860_2431145_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AZX15035.1|2431141_2431621_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AZX15036.1|2431617_2433246_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AZX15037.1|2433242_2433587_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AZX15038.1|2433586_2436520_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AZX15039.1|2437678_2438629_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15040.1|2438727_2439024_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15041.1|2439130_2440048_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15042.1|2440052_2440766_-	NAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX15043.1|2440779_2441751_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX15044.1|2443470_2443851_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15045.1|2443854_2445042_+	MFS transporter	NA	NA	NA	NA	NA
AZX16553.1|2445480_2446203_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZX15046.1|2446496_2447447_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2468238	2539339	4105484	transposase	Tetraselmis_virus(10.0%)	54	NA	NA
AZX15061.1|2468238_2469189_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15062.1|2469741_2471367_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AZX16558.1|2471416_2472451_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AZX15063.1|2472453_2473800_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16559.1|2473796_2475311_-	VWA domain-containing protein	NA	NA	NA	NA	NA
AZX15064.1|2475301_2476312_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15065.1|2476785_2477727_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AZX15066.1|2477735_2478704_-	AAA family ATPase	NA	NA	NA	NA	NA
AZX15067.1|2480243_2481212_+	transporter	NA	NA	NA	NA	NA
AZX15068.1|2481389_2482379_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX15069.1|2482425_2483184_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX15070.1|2483373_2484111_+	hypothetical protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AZX15071.1|2484209_2485160_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15072.1|2485344_2486127_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AZX15073.1|2486120_2486822_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX15074.1|2487061_2487664_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15075.1|2488990_2489941_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15076.1|2489937_2491494_-	LTA synthase family protein	NA	NA	NA	NA	NA
AZX15077.1|2491486_2492260_-	oxidoreductase	NA	NA	NA	NA	NA
AZX15078.1|2492318_2493269_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15079.1|2493350_2494526_-	capsule biosynthesis protein CapA	NA	NA	NA	NA	NA
AZX15080.1|2494539_2496417_-	beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase	NA	NA	NA	NA	NA
AZX15081.1|2496540_2497566_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
AZX15082.1|2497577_2498867_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
AZX15083.1|2498889_2499987_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
AZX15084.1|2499983_2500874_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZX15085.1|2500870_2502955_-	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AZX15086.1|2502986_2504156_-	capsule biosynthesis protein	NA	NA	NA	NA	NA
AZX15087.1|2504197_2504938_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX15088.1|2504937_2505708_-	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA	NA
AZX15089.1|2506563_2507349_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
AZX15090.1|2507375_2509460_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15091.1|2509627_2511583_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZX16560.1|2511906_2512407_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
AZX15092.1|2512505_2514032_-	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA	NA
AZX16561.1|2514169_2515057_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15093.1|2515071_2516025_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
AZX15094.1|2516076_2518167_-	DNA helicase RecG	NA	NA	NA	NA	NA
AZX15095.1|2518182_2518569_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
AZX15096.1|2521262_2522066_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
AZX15097.1|2523359_2524262_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15098.1|2524326_2525103_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AZX15099.1|2525424_2526474_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15100.1|2526597_2528268_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX15101.1|2528272_2529067_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
AZX15102.1|2529165_2530116_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15103.1|2530135_2531041_-	pirin family protein	NA	NA	NA	NA	NA
AZX15104.1|2531118_2531817_-	pirin family protein	NA	NA	NA	NA	NA
AZX15105.1|2531976_2532921_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15106.1|2532930_2534421_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AZX15107.1|2534417_2535485_-	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
AZX15108.1|2535548_2536961_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AZX15109.1|2537146_2538367_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
AZX15110.1|2538388_2539339_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2580281	2642128	4105484	transposase,protease,tRNA	Planktothrix_phage(14.29%)	60	NA	NA
AZX15149.1|2580281_2581232_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15150.1|2581330_2581939_-	recombination protein RecR	NA	NA	NA	NA	NA
AZX15151.1|2581989_2582316_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AZX15152.1|2582362_2584588_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
AZX15153.1|2585255_2588660_-	nuclease	NA	NA	NA	NA	NA
AZX15154.1|2588672_2591333_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15155.1|2591536_2592739_-	MFS transporter	NA	NA	NA	NA	NA
AZX15156.1|2593425_2594538_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
AZX15157.1|2594544_2595495_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15158.1|2595593_2595995_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AZX15159.1|2596067_2596646_-|protease	protease	protease	NA	NA	NA	NA
AZX16564.1|2596763_2597252_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AZX15160.1|2597265_2598198_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.5	2.3e-25
AZX15161.1|2598235_2599123_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.7	3.4e-18
AZX15162.1|2599280_2600975_+	thiamine pyrophosphate-binding protein	NA	E5ERI2	Ostreococcus_lucimarinus_virus	24.5	3.8e-26
AZX15163.1|2600991_2602248_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX15164.1|2602385_2602931_-	acyl dehydratase	NA	NA	NA	NA	NA
AZX15165.1|2602962_2604522_-	acetolactate synthase large subunit	NA	NA	NA	NA	NA
AZX15166.1|2604650_2605403_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	2.8e-29
AZX15167.1|2605424_2606117_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX15168.1|2606139_2606931_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15169.1|2606957_2607863_-	agmatinase	NA	NA	NA	NA	NA
AZX15170.1|2608055_2608892_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15171.1|2608983_2610006_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	40.7	1.6e-67
AZX15172.1|2610142_2611195_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	37.8	4.8e-35
AZX15173.1|2611199_2612390_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AZX15174.1|2612392_2612872_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.5	6.5e-16
AZX15175.1|2613057_2613537_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AZX15176.1|2613544_2613781_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15177.1|2613800_2614202_-	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
AZX15178.1|2614204_2614456_-	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA	NA
AZX15179.1|2614510_2615392_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	36.1	1.8e-51
AZX15180.1|2615616_2616063_+	GFA family protein	NA	NA	NA	NA	NA
AZX15181.1|2616147_2617212_-	fructose-bisphosphate aldolase class II	NA	NA	NA	NA	NA
AZX15182.1|2617348_2617930_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AZX15183.1|2618164_2619295_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX15184.1|2619472_2620699_+	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	58.8	5.2e-134
AZX15185.1|2620757_2621273_+	transporter	NA	NA	NA	NA	NA
AZX15186.1|2621295_2621622_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AZX15187.1|2621655_2622846_+	formate dehydrogenase	NA	NA	NA	NA	NA
AZX15188.1|2622919_2623324_+	GFA family protein	NA	NA	NA	NA	NA
AZX15189.1|2623540_2624491_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15190.1|2624589_2625360_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
AZX15191.1|2625356_2626028_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
AZX15192.1|2626024_2626666_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
AZX15193.1|2626678_2627599_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
AZX15194.1|2627759_2628920_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15195.1|2628961_2629912_-	ornithine cyclodeaminase	NA	NA	NA	NA	NA
AZX15196.1|2630510_2630735_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15197.1|2630899_2632594_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AZX15198.1|2632715_2632985_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AZX15199.1|2633100_2633499_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AZX15200.1|2633509_2634466_-	glutathione synthetase	NA	NA	NA	NA	NA
AZX15201.1|2634602_2635148_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
AZX15202.1|2635168_2637118_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
AZX15203.1|2637505_2638282_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX15204.1|2638287_2638680_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15205.1|2639101_2640052_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15206.1|2640048_2641146_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
AZX15207.1|2641177_2642128_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2773007	2813676	4105484	transposase,tRNA	Salmonella_phage(33.33%)	43	NA	NA
AZX15318.1|2773007_2773958_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15319.1|2774068_2774251_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15320.1|2774350_2774947_-	lipoprotein	NA	NA	NA	NA	NA
AZX15321.1|2775130_2776222_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15322.1|2776721_2777132_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15323.1|2777190_2777532_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
AZX15324.1|2777537_2779955_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX15325.1|2779967_2780990_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
AZX15326.1|2781064_2781424_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AZX15327.1|2781439_2781637_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AZX15328.1|2781972_2782923_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15329.1|2782909_2783098_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15330.1|2783117_2783567_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AZX15331.1|2783563_2784514_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15332.1|2784624_2786073_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX15333.1|2786187_2786469_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15334.1|2786572_2787523_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15335.1|2787767_2788481_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX15336.1|2788603_2788831_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX15337.1|2789125_2789764_-	DedA family protein	NA	NA	NA	NA	NA
AZX15338.1|2789836_2790907_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZX15339.1|2790903_2791854_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15340.1|2792269_2792794_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZX15341.1|2792797_2793067_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15342.1|2793265_2794327_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZX15343.1|2794410_2796045_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZX15344.1|2796046_2796850_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX15345.1|2796878_2797838_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX15346.1|2797841_2799356_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15347.1|2799392_2800397_-	peptidase M20	NA	NA	NA	NA	NA
AZX15348.1|2800828_2801299_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZX15349.1|2801334_2801946_-	LysE family translocator	NA	NA	NA	NA	NA
AZX15350.1|2801976_2802600_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZX15351.1|2802680_2804213_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX15352.1|2804247_2805489_-	MFS transporter	NA	NA	NA	NA	NA
AZX15353.1|2805532_2806564_-	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZX15354.1|2806560_2807730_-	amine oxidase	NA	NA	NA	NA	NA
AZX15355.1|2807723_2808404_-	anti-sigma factor	NA	NA	NA	NA	NA
AZX15356.1|2808565_2809408_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15357.1|2809570_2810542_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX15358.1|2810713_2811592_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZX15359.1|2811614_2812685_-	FUSC family protein	NA	NA	NA	NA	NA
AZX15360.1|2812725_2813676_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2869141	2942011	4105484	transposase,tRNA	Moraxella_phage(16.67%)	59	NA	NA
AZX15404.1|2869141_2869558_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AZX15405.1|2869668_2870301_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
AZX15406.1|2870329_2870773_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
AZX15407.1|2870794_2871886_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15408.1|2871940_2872741_-	aldolase	NA	NA	NA	NA	NA
AZX15409.1|2872876_2873497_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX15410.1|2873636_2874110_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15411.1|2875249_2876200_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15412.1|2876196_2883858_-	adhesin	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
AZX15413.1|2884098_2888145_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
AZX15414.1|2888457_2889039_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AZX15415.1|2889035_2890334_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX15416.1|2890413_2891442_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX15417.1|2891365_2891716_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15418.1|2891702_2892653_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15419.1|2892649_2893600_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15420.1|2893916_2894522_+	fimbrial protein FimX	NA	NA	NA	NA	NA
AZX15421.1|2894575_2895889_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AZX15422.1|2895963_2896434_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA	NA
AZX15423.1|2896433_2897222_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AZX15424.1|2897232_2898885_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AZX15425.1|2898972_2899923_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16575.1|2901084_2901591_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AZX15426.1|2901587_2902352_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AZX15427.1|2902367_2902652_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AZX15428.1|2902716_2903706_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AZX15429.1|2903877_2904807_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AZX15430.1|2904778_2905465_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AZX15431.1|2905498_2906044_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AZX15432.1|2906088_2907354_+	peptidase M48	NA	NA	NA	NA	NA
AZX15433.1|2907350_2908253_+	ribosome biogenesis GTPase	NA	NA	NA	NA	NA
AZX15434.1|2909434_2910379_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX15435.1|2910473_2911991_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15436.1|2912032_2913661_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX15437.1|2913768_2914650_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15438.1|2917762_2918137_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AZX15439.1|2918161_2918500_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AZX15440.1|2918543_2920178_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AZX15441.1|2920216_2921563_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA	NA
AZX16576.1|2921670_2923092_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AZX15442.1|2923161_2923746_-	nitroreductase	NA	NA	NA	NA	NA
AZX15443.1|2923848_2924799_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15444.1|2924933_2926040_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15445.1|2926050_2927148_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AZX15446.1|2927292_2928498_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZX15447.1|2928504_2929026_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AZX15448.1|2929022_2929514_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AZX15449.1|2929510_2929762_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AZX15450.1|2929742_2930228_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AZX15451.1|2930363_2933825_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15452.1|2933821_2934727_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AZX15453.1|2934736_2935168_-	lipoprotein	NA	NA	NA	NA	NA
AZX16577.1|2935414_2935918_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AZX15454.1|2935929_2937396_+	MFS transporter	NA	NA	NA	NA	NA
AZX15455.1|2937470_2938346_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16578.1|2938342_2939350_-	biotin synthase	NA	NA	NA	NA	NA
AZX15456.1|2939817_2940123_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX15457.1|2940213_2940804_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX16579.1|2940994_2942011_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	2945154	3011965	4105484	transposase,protease	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
AZX15460.1|2945154_2946105_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15461.1|2946203_2947154_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15462.1|2947150_2947945_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZX15463.1|2947976_2948681_-	oxidoreductase	NA	NA	NA	NA	NA
AZX15464.1|2948755_2949556_-	SURF1 family protein	NA	NA	NA	NA	NA
AZX15465.1|2949552_2949960_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZX15466.1|2949956_2950598_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZX15467.1|2950590_2952612_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX15468.1|2953851_2955183_+	MFS transporter	NA	NA	NA	NA	NA
AZX15469.1|2955179_2956130_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15470.1|2957836_2958142_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15471.1|2958810_2959149_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX15472.1|2963702_2964305_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15473.1|2964401_2965691_+	MFS transporter	NA	NA	NA	NA	NA
AZX15474.1|2965748_2966480_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZX15475.1|2966476_2967280_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZX15476.1|2967276_2968365_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX15477.1|2968361_2969291_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX15478.1|2969439_2970585_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15479.1|2970606_2971557_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15480.1|2971887_2975709_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX15481.1|2975865_2976534_-	lipoprotein	NA	NA	NA	NA	NA
AZX15482.1|2976538_2978212_-	MCE family protein	NA	NA	NA	NA	NA
AZX15483.1|2978230_2979550_-	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AZX15484.1|2979554_2981906_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZX16580.1|2981925_2984094_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZX15485.1|2984090_2989280_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZX15486.1|2989369_2989684_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZX15487.1|2989911_2990157_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZX15488.1|2990251_2990770_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZX15489.1|2990869_2992075_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZX15490.1|2992190_2993588_-	chloride channel protein EriC	NA	NA	NA	NA	NA
AZX15491.1|2993704_2994283_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZX15492.1|2994355_2995747_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZX15493.1|2995914_2996865_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15494.1|2997145_2997766_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZX15495.1|2997762_2998176_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZX15496.1|2998172_2999216_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZX15497.1|2999271_2999460_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15498.1|2999469_3000234_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZX15499.1|3000324_3000981_+	adenylate kinase	NA	NA	NA	NA	NA
AZX15500.1|3001072_3001831_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX15501.1|3001856_3003458_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZX15502.1|3003658_3004663_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZX15503.1|3004763_3005027_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZX15504.1|3005144_3005921_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZX15505.1|3006511_3007462_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15506.1|3009845_3010958_-	malate dehydrogenase	NA	NA	NA	NA	NA
AZX15507.1|3011014_3011965_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	3042351	3082589	4105484	transposase	Planktothrix_phage(50.0%)	39	NA	NA
AZX15536.1|3042351_3043302_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15537.1|3043288_3043534_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15538.1|3043422_3044319_-	inositol monophosphatase	NA	NA	NA	NA	NA
AZX15539.1|3046596_3048822_+	glycosyl hydrolase	NA	NA	NA	NA	NA
AZX15540.1|3048986_3050075_+	methionine import ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZX15541.1|3050031_3050685_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX15542.1|3050732_3051530_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15543.1|3052061_3053012_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15544.1|3053092_3054241_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZX15545.1|3054297_3055248_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15546.1|3055234_3055453_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15547.1|3055346_3055652_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX15548.1|3055680_3056115_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX15549.1|3056116_3057361_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX15550.1|3057357_3058068_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX16582.1|3058082_3058994_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX15551.1|3059363_3060314_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15552.1|3060405_3060810_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15553.1|3060806_3061265_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15554.1|3061271_3062180_+	hypothetical protein	NA	NA	NA	NA	NA
AZX16583.1|3062176_3063043_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX15555.1|3063029_3063857_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX15556.1|3063867_3064995_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZX15557.1|3066072_3067311_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX15558.1|3067352_3068615_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15559.1|3068621_3069374_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX15560.1|3069425_3069611_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15561.1|3069886_3070351_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZX15562.1|3070382_3071042_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZX15563.1|3071186_3073295_+	AsmA family protein	NA	NA	NA	NA	NA
AZX15564.1|3073291_3074242_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15565.1|3074345_3074966_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX16584.1|3075069_3075810_+	oxidoreductase	NA	NA	NA	NA	NA
AZX15566.1|3076944_3078069_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15567.1|3078114_3078483_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15568.1|3078724_3079675_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15569.1|3080710_3081253_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15570.1|3081457_3081652_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15571.1|3081638_3082589_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	3320781	3355619	4105484	transposase,holin	Erwinia_phage(20.0%)	36	NA	NA
AZX15759.1|3320781_3321732_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15760.1|3322176_3322488_-	cell division protein ZapA	NA	NA	NA	NA	NA
AZX15761.1|3322487_3323018_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15762.1|3323180_3324131_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15763.1|3324420_3324885_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZX15764.1|3324899_3326405_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZX15765.1|3326658_3328266_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX15766.1|3328321_3329227_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX15767.1|3329667_3330618_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15768.1|3330716_3331667_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15769.1|3331748_3332330_-	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA	NA
AZX16601.1|3332754_3333060_+	RND transporter	NA	NA	NA	NA	NA
AZX15770.1|3333073_3334408_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
AZX15771.1|3334429_3334969_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AZX15772.1|3335116_3335581_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
AZX15773.1|3335723_3336839_-	GTP-binding protein	NA	NA	NA	NA	NA
AZX15774.1|3337115_3337619_-	transcriptional repressor	NA	NA	NA	NA	NA
AZX15775.1|3337756_3337957_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15776.1|3337947_3338670_+	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
AZX15777.1|3338666_3339563_+	metal ABC transporter permease	NA	NA	NA	NA	NA
AZX15778.1|3339559_3340495_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX16602.1|3340500_3341124_+	DUF1007 domain-containing protein	NA	NA	NA	NA	NA
AZX15779.1|3341114_3342083_+	nickel transporter	NA	NA	NA	NA	NA
AZX15780.1|3342131_3344273_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX15781.1|3344285_3345266_-	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
AZX15782.1|3345280_3345973_-	DUF484 domain-containing protein	NA	NA	NA	NA	NA
AZX15783.1|3345999_3346911_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
AZX15784.1|3346953_3347844_-	acyltransferase	NA	NA	NA	NA	NA
AZX15785.1|3347840_3348695_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA	NA
AZX15786.1|3348843_3350142_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.9	1.6e-125
AZX15787.1|3350252_3350504_+	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AZX15788.1|3350583_3351624_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AZX15789.1|3351903_3353322_+	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
AZX15790.1|3353392_3353728_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX15791.1|3353727_3354570_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZX15792.1|3354668_3355619_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	3367448	3418327	4105484	transposase,protease,tRNA,integrase	Planktothrix_phage(33.33%)	40	3401123:3401141	3421011:3421029
AZX15801.1|3367448_3368399_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16604.1|3368711_3370190_+	phospholipase D family protein	NA	NA	NA	NA	NA
AZX15802.1|3370196_3371306_-	molybdenum import ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
AZX15803.1|3371317_3371998_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AZX15804.1|3372019_3372775_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX16605.1|3372910_3373795_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX15805.1|3373882_3374464_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15806.1|3374556_3374679_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15807.1|3374724_3375024_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX16606.1|3375175_3375601_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15808.1|3377807_3378311_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX15809.1|3378326_3379277_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15810.1|3379263_3379461_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15811.1|3379804_3380578_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15812.1|3380710_3381721_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX15813.1|3381872_3383528_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX15814.1|3383582_3383924_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AZX15815.1|3383937_3385377_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX15816.1|3385509_3386325_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15817.1|3386343_3386532_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15818.1|3386518_3387469_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15819.1|3388856_3389804_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15820.1|3390030_3390771_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15821.1|3390856_3391807_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15822.1|3393248_3394820_-	winged helix family transcriptional regulator	NA	NA	NA	NA	NA
AZX15823.1|3395152_3397006_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15824.1|3397050_3399615_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZX15825.1|3400033_3400984_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
3401123:3401141	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
AZX15826.1|3403849_3404344_-	DUF4276 domain-containing protein	NA	NA	NA	NA	NA
AZX15827.1|3404360_3405311_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15828.1|3405297_3405498_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15829.1|3405494_3406706_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AZX15830.1|3406721_3409673_-	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
AZX15831.1|3409674_3412794_-	restriction endonuclease	NA	NA	NA	NA	NA
AZX16607.1|3412790_3412931_-	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZX15832.1|3412941_3413988_-	Fic family protein	NA	NA	NA	NA	NA
AZX15833.1|3414329_3415457_-|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
AZX15834.1|3415736_3416828_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
AZX15835.1|3416900_3417683_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AZX15836.1|3417679_3418327_-|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
3421011:3421029	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
>prophage 28
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	3467214	3520955	4105484	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
AZX15873.1|3467214_3468165_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15874.1|3468569_3469214_-	urease accessory protein UreG	NA	NA	NA	NA	NA
AZX15875.1|3469238_3469823_-	urease accessory protein UreF	NA	NA	NA	NA	NA
AZX15876.1|3469923_3470541_-	urease accessory protein UreE	NA	NA	NA	NA	NA
AZX15877.1|3470543_3472259_-	urease subunit alpha	NA	NA	NA	NA	NA
AZX15878.1|3472255_3472564_-	urease subunit beta	NA	NA	NA	NA	NA
AZX15879.1|3472580_3473216_-	urease accessory protein UreJ	NA	NA	NA	NA	NA
AZX15880.1|3473242_3473545_-	urease subunit gamma	NA	NA	NA	NA	NA
AZX15881.1|3473645_3474500_-	urease accessory protein UreD	NA	NA	NA	NA	NA
AZX15882.1|3475081_3475354_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AZX15883.1|3475771_3476179_-	GFA family protein	NA	NA	NA	NA	NA
AZX15884.1|3476548_3477343_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15885.1|3477443_3478679_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX15886.1|3478747_3479764_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX15887.1|3479760_3481152_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX15888.1|3481148_3482345_+	MFS transporter	NA	NA	NA	NA	NA
AZX15889.1|3482341_3483880_-	SpoVR family protein	NA	NA	NA	NA	NA
AZX15890.1|3483876_3485136_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15891.1|3487076_3488027_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15892.1|3488793_3489888_-	CoA transferase	NA	NA	NA	NA	NA
AZX15893.1|3489880_3491215_-	CoA ligase	NA	NA	NA	NA	NA
AZX15894.1|3491168_3491852_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15895.1|3491877_3493041_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX15896.1|3493037_3494039_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX15897.1|3494038_3494911_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX15898.1|3494907_3495657_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZX15899.1|3495653_3496445_-	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZX15900.1|3496441_3497581_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15901.1|3497889_3498642_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX15902.1|3498675_3499458_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX15903.1|3499461_3499851_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX16610.1|3500990_3501854_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX15904.1|3501889_3502978_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15905.1|3502974_3503925_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15906.1|3503911_3504280_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15907.1|3504278_3507257_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15908.1|3508183_3509062_+	fatty acid desaturase	NA	NA	NA	NA	NA
AZX15909.1|3511010_3511961_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15910.1|3511957_3512425_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZX15911.1|3512467_3513238_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX15912.1|3513258_3514059_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZX15913.1|3514069_3515479_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZX15914.1|3515573_3516359_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX16611.1|3516598_3517615_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX15915.1|3517722_3518115_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZX15916.1|3518252_3518933_+	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AZX15917.1|3518937_3519936_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX15918.1|3520004_3520955_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	3527110	3586409	4105484	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
AZX15922.1|3527110_3528874_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AZX15923.1|3528985_3529864_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZX15924.1|3529976_3530792_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZX15925.1|3530795_3531047_+	cell division topological specificity factor	NA	NA	NA	NA	NA
AZX16612.1|3531131_3532148_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX15926.1|3532478_3532700_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15927.1|3535060_3535978_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX15928.1|3536475_3537684_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX15929.1|3537763_3539335_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX15930.1|3539452_3540388_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZX15931.1|3540576_3541521_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZX15932.1|3541589_3541805_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15933.1|3542088_3547806_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZX15934.1|3547811_3548939_+	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZX15935.1|3548994_3549621_+	aminotransferase	NA	NA	NA	NA	NA
AZX16613.1|3549892_3550909_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX15936.1|3551004_3551715_-	oxidoreductase	NA	NA	NA	NA	NA
AZX16614.1|3551711_3552701_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX15937.1|3552832_3554428_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZX15938.1|3554430_3555168_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15939.1|3555323_3556196_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZX15940.1|3556464_3557685_+	MFS transporter	NA	NA	NA	NA	NA
AZX15941.1|3557681_3558341_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX15942.1|3558412_3559045_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZX15943.1|3559074_3559593_+	flavin reductase	NA	NA	NA	NA	NA
AZX15944.1|3559603_3560713_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX15945.1|3560759_3561614_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZX15946.1|3561615_3562518_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15947.1|3563740_3564691_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15948.1|3566446_3567436_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15949.1|3567611_3568400_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZX15950.1|3568396_3569428_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZX15951.1|3569446_3570010_-	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZX15952.1|3570065_3571586_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZX15953.1|3571849_3572554_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX15954.1|3572561_3573299_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZX15955.1|3573404_3573779_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZX15956.1|3573821_3575111_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15957.1|3575107_3576277_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZX15958.1|3576273_3577113_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZX15959.1|3577172_3578108_+	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZX15960.1|3578120_3579071_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15961.1|3579169_3580132_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZX15962.1|3580163_3580523_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZX15963.1|3580647_3581550_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZX15964.1|3581551_3583324_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
AZX15965.1|3583358_3584135_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX15966.1|3585458_3586409_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	3601347	3659420	4105484	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
AZX15978.1|3601347_3602298_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15979.1|3602426_3603560_-	peptidase	NA	NA	NA	NA	NA
AZX15980.1|3603603_3604509_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX15981.1|3604511_3606212_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
AZX15982.1|3606208_3607129_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX15983.1|3607136_3608114_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX15984.1|3608172_3609207_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZX15985.1|3611181_3611418_-	hypothetical protein	NA	NA	NA	NA	NA
AZX15986.1|3611544_3612408_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZX15987.1|3612496_3613318_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX15988.1|3613397_3614135_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX15989.1|3614131_3615124_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AZX15990.1|3615237_3615900_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15991.1|3615944_3617093_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX15992.1|3619416_3620367_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15993.1|3620707_3621658_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15994.1|3621756_3622707_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX15995.1|3623003_3623501_+	hypothetical protein	NA	NA	NA	NA	NA
AZX15996.1|3623543_3625319_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AZX16617.1|3625365_3626193_+	copper resistance protein B	NA	NA	NA	NA	NA
AZX15997.1|3626199_3626934_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX15998.1|3628103_3628898_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX15999.1|3629187_3629778_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX16000.1|3629811_3631140_-	amidase	NA	NA	NA	NA	NA
AZX16001.1|3631214_3632360_-	transporter	NA	NA	NA	NA	NA
AZX16002.1|3632471_3633470_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16003.1|3633432_3633867_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AZX16004.1|3635383_3636268_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX16005.1|3636264_3637470_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZX16006.1|3637466_3638327_-	endonuclease	NA	NA	NA	NA	NA
AZX16007.1|3638439_3640230_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AZX16008.1|3640270_3640936_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
AZX16009.1|3640936_3641245_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
AZX16618.1|3641410_3642697_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16010.1|3644130_3645081_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16011.1|3647032_3648247_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AZX16012.1|3648352_3649342_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AZX16013.1|3649338_3649947_+	hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AZX16014.1|3649959_3650589_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AZX16015.1|3650585_3651206_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AZX16016.1|3651237_3652029_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AZX16017.1|3652871_3653336_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZX16018.1|3653354_3654281_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZX16019.1|3654334_3655621_-	cytochrome c	NA	NA	NA	NA	NA
AZX16020.1|3656551_3657424_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AZX16021.1|3657420_3658371_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AZX16022.1|3658469_3659420_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 32
CP025356	Bordetella pertussis strain H034 chromosome, complete genome	4105484	4003503	4068415	4105484	transposase	Planktothrix_phage(40.0%)	58	NA	NA
AZX16342.1|4003503_4003989_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16343.1|4004207_4005188_+	protein BugT	NA	NA	NA	NA	NA
AZX16344.1|4005454_4006264_+	Pertussis toxin subunit 1	NA	NA	NA	NA	NA
AZX16345.1|4006303_4006984_+	Pertussis toxin subunit 2	NA	NA	NA	NA	NA
AZX16346.1|4006977_4007436_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
AZX16347.1|4007447_4007810_+	Pertussis toxin subunit 5	NA	NA	NA	NA	NA
AZX16348.1|4007892_4008576_+	Pertussis toxin subunit 3	NA	NA	NA	NA	NA
AZX16349.1|4008631_4008940_+	type IV secretion protein A	NA	NA	NA	NA	NA
AZX16350.1|4008958_4009273_+	type IV secretion protein B	NA	NA	NA	NA	NA
AZX16351.1|4009269_4011744_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
AZX16352.1|4011751_4013143_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
AZX16353.1|4013139_4013325_+	type IV secretion protein I	NA	NA	NA	NA	NA
AZX16354.1|4013303_4014005_+	type IV secretion protein E	NA	NA	NA	NA	NA
AZX16355.1|4014001_4014823_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
AZX16634.1|4014803_4015928_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
AZX16356.1|4015920_4016940_+	type IV secretion protein H	NA	NA	NA	NA	NA
AZX16357.1|4017145_4018180_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX16635.1|4018280_4019072_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX16358.1|4019154_4019529_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
AZX16359.1|4019506_4020916_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
AZX16360.1|4020908_4022291_+	DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
AZX16361.1|4022625_4024230_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX16362.1|4024265_4025279_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX16363.1|4025289_4026216_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX16364.1|4026606_4027557_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16365.1|4027726_4028953_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
AZX16366.1|4029152_4030019_+	DUF815 domain-containing protein	NA	NA	NA	NA	NA
AZX16367.1|4030011_4030974_+	NUDIX domain-containing protein	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
AZX16368.1|4031074_4032025_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16369.1|4032123_4033074_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16370.1|4033172_4034123_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX16371.1|4034119_4035613_-	RND transporter	NA	NA	NA	NA	NA
AZX16372.1|4035609_4038717_-	multidrug transporter subunit MdtC	NA	NA	NA	NA	NA
AZX16373.1|4038713_4041782_-	multidrug transporter subunit MdtB	NA	NA	NA	NA	NA
AZX16374.1|4041778_4043029_-	multidrug transporter subunit MdtA	NA	NA	NA	NA	NA
AZX16375.1|4043209_4043971_-	cell division protein ZapD	NA	NA	NA	NA	NA
AZX16376.1|4044003_4044654_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AZX16377.1|4044656_4045496_-	prepilin peptidase	NA	NA	NA	NA	NA
AZX16378.1|4045736_4046480_+	hypothetical protein	NA	NA	NA	NA	NA
AZX16379.1|4046562_4046910_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZX16380.1|4047007_4047850_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZX16381.1|4047894_4048782_-	segregation/condensation protein A	NA	NA	NA	NA	NA
AZX16382.1|4048808_4048997_-	DUF3460 domain-containing protein	NA	NA	NA	NA	NA
AZX16383.1|4049094_4050552_+	MFS transporter	NA	NA	NA	NA	NA
AZX16384.1|4050538_4052065_+	glycerol kinase	NA	NA	NA	NA	NA
AZX16385.1|4052083_4052551_-	hypothetical protein	NA	NA	NA	NA	NA
AZX16386.1|4052550_4053573_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX16387.1|4053693_4054434_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
AZX16388.1|4054488_4055589_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX16389.1|4055590_4056781_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX16390.1|4056900_4057917_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
AZX16391.1|4058235_4058907_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
AZX16392.1|4058903_4059812_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX16393.1|4060023_4060671_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AZX16394.1|4064522_4065599_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AZX16395.1|4065609_4066419_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX16396.1|4066508_4067282_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX16397.1|4067464_4068415_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
