The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	0	122073	4100921	transposase,protease,tRNA	Planktothrix_phage(16.67%)	110	NA	NA
AZX95673.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZX95674.1|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA	NA
AZX95675.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZX95676.1|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX95677.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZX95678.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZX95679.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZX95680.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZX95681.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZX95682.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZX95683.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZX95684.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZX95685.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZX95686.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZX99057.1|20126_20531_-	lipoprotein	NA	NA	NA	NA	NA
AZX95687.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AZX95688.1|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZX95689.1|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX95690.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95691.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
AZX95692.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
AZX95693.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
AZX95694.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
AZX99058.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX95695.1|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX95696.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX95697.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95698.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
AZX95699.1|36949_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZX95700.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX95701.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZX95702.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX95703.1|41318_42212_+	M48 family peptidase	NA	NA	NA	NA	NA
AZX95704.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZX95705.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZX95706.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AZX95707.1|43663_44614_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95708.1|45113_45749_+	hypothetical protein	NA	NA	NA	NA	NA
AZX95709.1|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX95710.1|46084_46978_+	hypothetical protein	NA	NA	NA	NA	NA
AZX95711.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZX95712.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZX95713.1|50141_51092_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95714.1|51134_52391_+	MFS transporter	NA	NA	NA	NA	NA
AZX95715.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZX95716.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZX95717.1|54977_55667_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX95718.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX95719.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX95720.1|57497_58448_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95721.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZX95722.1|60474_60894_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX95723.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
AZX99059.1|62442_63279_-	hypothetical protein	NA	NA	NA	NA	NA
AZX95724.1|63473_64055_-|protease	protease	protease	NA	NA	NA	NA
AZX95725.1|64067_64385_-	ferredoxin	NA	NA	NA	NA	NA
AZX95726.1|64488_65547_-	oxidoreductase	NA	NA	NA	NA	NA
AZX95727.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX95728.1|67482_68664_-	hypothetical protein	NA	NA	NA	NA	NA
AZX95729.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95730.1|70129_70444_+|transposase	transposase	transposase	NA	NA	NA	NA
AZX95731.1|71636_73544_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZX95732.1|73705_74326_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX95733.1|74357_74939_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZX95734.1|75027_75279_-	hypothetical protein	NA	NA	NA	NA	NA
AZX99060.1|75280_76030_-	hypothetical protein	NA	NA	NA	NA	NA
AZX95735.1|76228_77638_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZX95736.1|77634_78585_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99061.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95737.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZX95738.1|82822_83527_-	DUF2837 domain-containing protein	NA	NA	NA	NA	NA
AZX95739.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZX95740.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
AZX95741.1|85481_86714_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA	NA
AZX95742.1|86731_87991_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZX95743.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZX95744.1|89110_90211_-	aminotransferase DegT	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZX95745.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX95746.1|90793_91846_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AZX95747.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZX95748.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZX95749.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
AZX95750.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AZX95751.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZX95752.1|96203_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX95753.1|97339_98179_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZX95754.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
AZX95755.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX95756.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AZX95757.1|101788_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZX95758.1|102808_103084_+	DUF493 domain-containing protein	NA	NA	NA	NA	NA
AZX95759.1|103091_103754_+	octanoyltransferase	NA	NA	NA	NA	NA
AZX95760.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
AZX95761.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AZX95762.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZX95763.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZX95764.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95765.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX95766.1|110552_111182_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AZX95767.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX95768.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX99062.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZX95769.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
AZX95770.1|114944_115961_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX95771.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX95772.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX95773.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX95774.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZX95775.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
AZX95776.1|121122_122073_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	164893	225404	4100921	transposase,protease,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
AZX95808.1|164893_165844_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95809.1|167287_168190_-	hypothetical protein	NA	NA	NA	NA	NA
AZX95810.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
AZX99067.1|169127_170510_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZX95811.1|170543_171173_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZX95812.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZX95813.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
AZX99068.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
AZX95814.1|174301_175252_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95815.1|176367_176895_+	lipoprotein	NA	NA	NA	NA	NA
AZX95816.1|176986_177802_+	lipoprotein	NA	NA	NA	NA	NA
AZX95817.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
AZX95818.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZX95819.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
AZX95820.1|181333_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZX95821.1|182425_184330_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AZX95822.1|184326_188001_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AZX95823.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZX95824.1|188632_189055_-	glyoxalase	NA	NA	NA	NA	NA
AZX95825.1|189082_189502_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AZX99069.1|189530_189977_-	N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AZX95826.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
AZX95827.1|190755_193026_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZX95828.1|193074_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX95829.1|194405_195356_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95830.1|195401_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AZX95831.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX95832.1|197378_198479_+	aminomethyltransferase	NA	NA	NA	NA	NA
AZX95833.1|198560_198935_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZX95834.1|198994_201859_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZX95835.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX95836.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
AZX95837.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX95838.1|205635_206586_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95839.1|206742_207066_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AZX95840.1|207170_208220_-	cyclase	NA	NA	NA	NA	NA
AZX95841.1|208216_209041_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AZX95842.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
AZX95843.1|209363_209639_-	muconolactone delta-isomerase	NA	NA	NA	NA	NA
AZX95844.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX95845.1|210339_211026_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX99070.1|211155_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX95846.1|212057_212783_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX95847.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZX95848.1|214275_215208_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX95849.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZX95850.1|219054_221997_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZX95851.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZX95852.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZX95853.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZX95854.1|224453_225404_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	233336	287973	4100921	transposase,protease,tRNA	Bacillus_phage(25.0%)	49	NA	NA
AZX95862.1|233336_234287_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95863.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95864.1|235320_236271_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95865.1|236369_237320_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95866.1|237418_238216_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX95867.1|239165_239576_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZX95868.1|240597_241341_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX95869.1|241384_242428_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX95870.1|242598_244701_+	hypothetical protein	NA	NA	NA	NA	NA
AZX95871.1|246111_247068_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX95872.1|247086_247578_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZX95873.1|247574_248930_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZX95874.1|248930_249629_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZX95875.1|249625_250327_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZX95876.1|250579_251629_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZX95877.1|251734_252676_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZX95878.1|252672_254562_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZX95879.1|254648_255287_+	hypothetical protein	NA	NA	NA	NA	NA
AZX99071.1|255429_256674_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZX95880.1|256745_257282_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZX95881.1|257433_258825_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZX95882.1|258841_259822_-	AEC family transporter	NA	NA	NA	NA	NA
AZX95883.1|259957_260941_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZX95884.1|261005_261905_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX95885.1|262011_263766_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX95886.1|263773_264898_-	CoA transferase	NA	NA	NA	NA	NA
AZX95887.1|264911_265892_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX95888.1|266622_267573_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95889.1|268132_268678_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX95890.1|268761_270381_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX95891.1|270396_271551_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZX95892.1|271564_271690_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AZX95893.1|271686_273438_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZX95894.1|273434_275114_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZX95895.1|275149_275725_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AZX95896.1|276867_277146_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX95897.1|278189_279140_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX95898.1|279126_279342_-	hypothetical protein	NA	NA	NA	NA	NA
AZX95899.1|279417_279579_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZX95900.1|279586_279727_+	hypothetical protein	NA	NA	NA	NA	NA
AZX95901.1|280245_280695_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZX95902.1|280704_281316_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX95903.1|281474_282329_-	cytochrome c1	NA	NA	NA	NA	NA
AZX95904.1|282348_283731_-	cytochrome b	NA	NA	NA	NA	NA
AZX95905.1|283795_284437_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZX95906.1|284576_285035_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AZX95907.1|285059_285836_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZX95908.1|285889_287026_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZX95909.1|287022_287973_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	391906	449415	4100921	transposase	Orpheovirus(14.29%)	50	NA	NA
AZX96008.1|391906_392857_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96009.1|392993_393911_+	reductase	NA	NA	NA	NA	NA
AZX96010.1|393907_394156_+	glutaredoxin family protein	NA	NA	NA	NA	NA
AZX96011.1|394152_395358_+	CoA transferase	NA	NA	NA	NA	NA
AZX96012.1|395430_396426_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96013.1|396448_397669_-	CoA transferase	NA	NA	NA	NA	NA
AZX96014.1|397665_398310_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96015.1|400040_400850_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX99077.1|401067_402108_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
AZX96016.1|402206_403190_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96017.1|403116_403818_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96018.1|403866_404637_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX96019.1|404633_405875_-	CoA transferase	NA	NA	NA	NA	NA
AZX96020.1|405979_407686_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZX96021.1|407682_408579_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96022.1|408619_410209_-	sulfurtransferase	NA	NA	NA	NA	NA
AZX96023.1|410258_411251_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96024.1|411319_411919_-	hypothetical protein	NA	NA	NA	NA	NA
AZX99078.1|412379_413357_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96025.1|413435_414386_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96026.1|414474_415389_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX96027.1|415385_416045_+	LysE family translocator	NA	NA	NA	NA	NA
AZX96028.1|416134_417058_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
AZX96029.1|417063_417519_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96030.1|417515_418619_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AZX99079.1|418538_418847_+	GtrA family protein	NA	NA	NA	NA	NA
AZX96031.1|418806_420426_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA	NA
AZX96032.1|420422_421481_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
AZX96033.1|421610_422105_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX96034.1|422197_423175_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96035.1|423370_424576_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AZX96036.1|424572_426084_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX99080.1|426099_427413_-	short-chain fatty acids transporter	NA	NA	NA	NA	NA
AZX96037.1|427603_427783_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96038.1|428192_428927_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AZX96039.1|431371_432322_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96040.1|432453_432852_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
AZX96041.1|433262_433733_-	universal stress protein	NA	NA	NA	NA	NA
AZX96042.1|433821_434166_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
AZX96043.1|434265_435666_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX96044.1|437454_437973_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
AZX96045.1|438083_438839_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
AZX96046.1|439034_440267_+	CoA transferase	NA	NA	NA	NA	NA
AZX96047.1|440259_441045_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX96048.1|441111_442083_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96049.1|442093_443071_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96050.1|443196_444369_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX96051.1|444395_445424_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX96052.1|445489_446683_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX96053.1|448464_449415_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	622887	723351	4100921	terminase,transposase,tail,tRNA	uncultured_Caudovirales_phage(13.79%)	111	NA	NA
AZX96205.1|622887_623838_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96206.1|624536_624920_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96207.1|624977_625580_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
AZX99087.1|625597_625999_-	DoxX family protein	NA	NA	NA	NA	NA
AZX99088.1|626132_627026_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96208.1|627022_627604_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AZX96209.1|628398_629133_+	arginyltransferase	NA	NA	NA	NA	NA
AZX96210.1|629173_630223_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AZX96211.1|630370_630949_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AZX96212.1|631335_632313_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
AZX96213.1|632406_636801_-	dermonecrotic toxin	NA	NA	NA	NA	NA
AZX96214.1|637001_637850_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96215.1|638008_638821_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
AZX96216.1|638876_639827_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96217.1|639925_640726_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96218.1|640787_641171_+	thioredoxin	NA	NA	NA	NA	NA
AZX96219.1|641182_642616_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZX96220.1|642822_643152_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
AZX99089.1|643154_643823_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX96221.1|644086_645007_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AZX96222.1|645053_645266_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AZX96223.1|645288_645711_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZX96224.1|645727_646828_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX96225.1|646924_648442_-	peptidase	NA	NA	NA	NA	NA
AZX96226.1|648517_649357_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZX96227.1|649378_650260_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AZX96228.1|650341_651436_-	porin	NA	NA	NA	NA	NA
AZX96229.1|651729_652680_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99090.1|652754_653696_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96230.1|653779_654139_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96231.1|654520_655558_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96232.1|655874_657215_+	peptidase M24 family protein	NA	NA	NA	NA	NA
AZX96233.1|657224_657677_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96234.1|657773_658955_+	monooxygenase	NA	NA	NA	NA	NA
AZX96235.1|659014_660046_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZX96236.1|660086_660326_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX96237.1|660395_661985_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZX96238.1|661984_662533_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZX96239.1|662613_663186_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AZX96240.1|663204_664116_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AZX96241.1|664189_665158_-	threonine/serine dehydratase	NA	NA	NA	NA	NA
AZX96242.1|665280_666354_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZX96243.1|666358_668179_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZX96244.1|668255_669206_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96245.1|669294_669630_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AZX96246.1|669763_670414_+	carbonic anhydrase	NA	NA	NA	NA	NA
AZX99091.1|670435_671854_-	amidase	NA	NA	NA	NA	NA
AZX96247.1|671923_672679_-	hypothetical protein	NA	NA	NA	NA	NA
AZX99092.1|672647_673406_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX96248.1|673416_674298_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX96249.1|674314_675022_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZX96250.1|675024_675783_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZX96251.1|675992_677735_+	sulfite reductase	NA	NA	NA	NA	NA
AZX96252.1|677727_678252_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AZX96253.1|678291_679086_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX96254.1|679253_680327_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96255.1|680425_681376_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96256.1|681627_681840_-	hypothetical protein	NA	NA	NA	NA	NA
AZX99093.1|681905_682517_-	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZX96257.1|682996_683317_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96258.1|683309_684008_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96259.1|684022_684244_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96260.1|684261_685212_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99094.1|685887_686337_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZX96261.1|686323_687601_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZX96262.1|687603_689022_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZX99095.1|689050_690106_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZX96263.1|690111_690354_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZX96264.1|690476_691079_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZX96265.1|691507_692458_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96266.1|692475_693123_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZX96267.1|693132_693384_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96268.1|693446_693929_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZX96269.1|693930_694131_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96270.1|694130_694526_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZX96271.1|694522_694921_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZX96272.1|694917_695340_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96273.1|695347_695848_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZX96274.1|696102_696621_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZX96275.1|696630_696960_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZX96276.1|696977_697268_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZX96277.1|697293_699906_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZX96278.1|699915_700275_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96279.1|700342_700876_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZX96280.1|700872_701262_+	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZX96281.1|701254_705211_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AZX96282.1|705215_705632_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96283.1|705850_706114_+	hypothetical protein	NA	A0A1B0V3F2	Roseobacter_phage	41.8	7.2e-09
AZX96284.1|706113_706926_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96285.1|706930_707173_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96286.1|707151_707703_+	lysozyme	NA	NA	NA	NA	NA
AZX96287.1|707684_708218_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AZX99096.1|708214_708496_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96288.1|708838_709039_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96289.1|709045_709717_-	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZX99097.1|710072_710759_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX96290.1|710739_711312_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZX96291.1|711377_713108_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZX96292.1|713160_713589_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZX96293.1|713591_714272_+	protein TolQ	NA	NA	NA	NA	NA
AZX96294.1|714271_714730_+	protein TolR	NA	NA	NA	NA	NA
AZX96295.1|714766_715741_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AZX96296.1|715757_717074_+	protein TolB	NA	NA	NA	NA	NA
AZX96297.1|717105_717603_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AZX96298.1|717689_718379_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZX96299.1|718378_719428_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX96300.1|719424_720219_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZX96301.1|720387_720738_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96302.1|720713_721271_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96303.1|722195_722414_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96304.1|722400_723351_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	738038	796069	4100921	transposase	Planktothrix_phage(33.33%)	45	NA	NA
AZX96314.1|738038_738989_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96315.1|739148_740021_-	carboxyvinyl-carboxyphosphonate phosphorylmutase	NA	NA	NA	NA	NA
AZX96316.1|740361_740580_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
AZX96317.1|740619_741999_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
AZX96318.1|742040_743438_-	amidase	NA	NA	NA	NA	NA
AZX96319.1|743477_745130_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
AZX96320.1|745133_746018_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AZX96321.1|746017_746959_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX96322.1|747037_748657_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX96323.1|748823_749639_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96324.1|749706_750276_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96325.1|750276_751227_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96326.1|751881_752979_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZX96327.1|753012_754278_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AZX96328.1|754435_755386_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96329.1|755629_756220_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZX96330.1|756235_758680_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX96331.1|758799_759771_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96332.1|759902_760427_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZX96333.1|760386_761337_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96334.1|761558_763754_-	DNA methylase	NA	NA	NA	NA	NA
AZX96335.1|763826_764234_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX96336.1|764356_765307_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96337.1|765422_765866_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX96338.1|765928_766723_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX96339.1|766888_768025_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
AZX96340.1|768095_769229_-	GTPase ObgE	NA	NA	NA	NA	NA
AZX96341.1|769378_769639_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
AZX96342.1|769672_769984_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
AZX96343.1|770408_771557_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AZX96344.1|771671_772637_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
AZX96345.1|772905_773772_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96346.1|773902_775951_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZX96347.1|775968_777966_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZX96348.1|778000_779338_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZX96349.1|779600_781454_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96350.1|781508_782990_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX96351.1|783005_783593_-	cyclolysin-activating lysine-acyltransferase CyaC	NA	NA	NA	NA	NA
AZX96352.1|783675_783855_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96353.1|784041_789162_+	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
AZX96354.1|789239_791378_+	cyclolysin secretion/processing ATP-binding protein CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
AZX96355.1|791374_792697_+	protein CyaD	NA	NA	NA	NA	NA
AZX96356.1|792698_794123_+	protein CyaE	NA	NA	NA	NA	NA
AZX96357.1|794213_795122_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96358.1|795118_796069_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	857222	906486	4100921	transposase,holin	Vibrio_phage(33.33%)	40	NA	NA
AZX96412.1|857222_858173_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99099.1|858145_858745_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96413.1|858746_859181_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX96414.1|859177_859612_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96415.1|859595_860399_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AZX96416.1|860415_861231_-	DNA repair exonuclease	NA	NA	NA	NA	NA
AZX99100.1|861227_862043_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AZX96417.1|862189_862891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96418.1|862918_864877_-|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AZX96419.1|864959_865910_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96420.1|866130_866799_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX96421.1|866922_868029_+	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX96422.1|868041_871155_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
AZX96423.1|871151_872645_+	RND transporter	NA	NA	NA	NA	NA
AZX96424.1|872659_873331_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX96425.1|873374_873869_-	azurin	NA	NA	NA	NA	NA
AZX96426.1|874009_874657_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX99101.1|874760_876809_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZX96427.1|876805_878818_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZX99102.1|878843_880178_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX96428.1|880286_881279_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96429.1|881345_883430_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AZX96430.1|883454_884426_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96431.1|884554_885556_-	peptidase M14	NA	NA	NA	NA	NA
AZX96432.1|885589_886831_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX96433.1|886911_887835_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
AZX96434.1|887912_888737_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX96435.1|888933_889950_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX96436.1|890146_891130_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96437.1|892728_894117_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX96438.1|894147_895137_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96439.1|895247_896480_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX96440.1|896761_897562_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96441.1|897584_899816_-|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZX96442.1|900603_901050_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZX96443.1|901071_901818_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZX96444.1|901961_902939_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZX96445.1|903572_904184_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZX96446.1|904177_905395_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZX96447.1|905535_906486_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	916098	981038	4100921	transposase	Bacillus_phage(18.18%)	60	NA	NA
AZX96456.1|916098_917049_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96457.1|917045_918896_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AZX96458.1|919276_919936_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AZX96459.1|920023_920176_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96460.1|920284_920452_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96461.1|920463_921144_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AZX96462.1|921425_922142_+	flagellar brake protein	NA	NA	NA	NA	NA
AZX96463.1|922156_923458_-	phospholipase	NA	NA	NA	NA	NA
AZX96464.1|925602_928491_+	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
AZX96465.1|928714_930067_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX96466.1|930095_930617_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AZX96467.1|930613_932068_+	carboxylase	NA	NA	NA	NA	NA
AZX96468.1|932102_932351_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96469.1|932456_933332_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96470.1|933357_934413_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96471.1|934425_935217_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96472.1|935249_936620_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AZX96473.1|937796_938747_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96474.1|938799_939021_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96475.1|939180_939393_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96476.1|939512_940631_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZX96477.1|940727_940943_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96478.1|941136_941388_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96479.1|941500_942451_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96480.1|942447_942831_-	ferredoxin	NA	NA	NA	NA	NA
AZX96481.1|942885_944703_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
AZX96482.1|944849_945677_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
AZX96483.1|945722_946703_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZX96484.1|946699_946912_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96485.1|946908_948090_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AZX96486.1|948253_948988_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
AZX96487.1|948989_951602_-	penicillin-binding protein	NA	NA	NA	NA	NA
AZX96488.1|951737_953651_-	S9 family peptidase	NA	NA	NA	NA	NA
AZX96489.1|954266_954677_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX96490.1|954774_955860_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZX96491.1|955958_956909_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96492.1|956905_957880_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX96493.1|958004_958916_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AZX99104.1|959192_959585_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZX96494.1|959714_960665_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96495.1|960694_960877_-	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZX96496.1|960915_961173_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96497.1|961649_962831_-	MFS transporter	NA	NA	NA	NA	NA
AZX96498.1|963046_963724_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX96499.1|963720_964494_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AZX96500.1|964571_965153_-	OmpA family protein	NA	NA	NA	NA	NA
AZX96501.1|965523_968205_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZX96502.1|968204_969338_+	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AZX96503.1|969330_970416_+	prephenate dehydratase	NA	NA	NA	NA	NA
AZX96504.1|970502_971402_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AZX96505.1|971398_972727_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZX96506.1|972741_973413_+	cytidylate kinase	NA	NA	NA	NA	NA
AZX96507.1|973585_975316_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZX96508.1|975317_975677_+	integration host factor subunit beta	NA	NA	NA	NA	NA
AZX96509.1|975868_976183_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AZX96510.1|976225_977446_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZX96511.1|977442_978384_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZX96512.1|978380_979370_+	ADP-L-glycero-D-mannoheptose-6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZX96513.1|979404_979989_+	DUF655 domain-containing protein	NA	NA	NA	NA	NA
AZX96514.1|980087_981038_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	1000438	1063589	4100921	transposase	Enterococcus_phage(16.67%)	53	NA	NA
AZX96529.1|1000438_1001389_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96530.1|1001493_1002543_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AZX96531.1|1002680_1003697_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX96532.1|1005205_1005778_-	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AZX96533.1|1005837_1006569_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AZX99106.1|1006620_1007538_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96534.1|1008345_1011525_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX96535.1|1011521_1012904_+	multidrug transporter	NA	NA	NA	NA	NA
AZX96536.1|1012973_1013225_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZX96537.1|1013370_1014021_-	SCO family protein	NA	NA	NA	NA	NA
AZX96538.1|1014171_1016286_-	M3 family peptidase	NA	NA	NA	NA	NA
AZX96539.1|1016361_1017213_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AZX96540.1|1017209_1017836_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX96541.1|1017832_1019587_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AZX96542.1|1019879_1022585_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AZX96543.1|1022597_1024259_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AZX96544.1|1024271_1026062_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AZX96545.1|1026283_1027459_-	flagellin FliC	NA	NA	NA	NA	NA
AZX96546.1|1027501_1028452_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96547.1|1028550_1029291_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AZX96548.1|1029485_1031522_+	transketolase	NA	NA	NA	NA	NA
AZX96549.1|1031539_1032550_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AZX96550.1|1032667_1033861_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
AZX96551.1|1033890_1034664_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX96552.1|1034660_1035851_-	acetate kinase	NA	NA	NA	NA	NA
AZX96553.1|1035876_1036815_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
AZX99107.1|1036811_1039160_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
AZX96554.1|1039314_1040022_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX96555.1|1040059_1041193_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96556.1|1041469_1042018_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZX96557.1|1042036_1042522_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX96558.1|1042699_1043638_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZX96559.1|1043640_1043958_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96560.1|1044003_1044948_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96561.1|1046628_1047279_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZX96562.1|1047332_1047668_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96563.1|1047664_1048525_+	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZX96564.1|1048541_1048823_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96565.1|1048896_1049160_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZX96566.1|1049403_1050354_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96567.1|1050652_1051390_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZX96568.1|1051825_1052149_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZX96569.1|1052183_1052744_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZX96570.1|1052864_1053740_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZX96571.1|1053752_1054700_+	motility protein MotB	NA	NA	NA	NA	NA
AZX96572.1|1054801_1055095_+	response regulator	NA	NA	NA	NA	NA
AZX96573.1|1055121_1057179_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZX96574.1|1057193_1057694_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZX96575.1|1057767_1059474_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZX96576.1|1060337_1061390_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZX96577.1|1061442_1061832_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZX96578.1|1061840_1062473_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZX96579.1|1062572_1063589_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	1069573	1137735	4100921	transposase,holin,tRNA	uncultured_Mediterranean_phage(25.0%)	55	NA	NA
AZX96584.1|1069573_1071001_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZX96585.1|1071938_1072955_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX96586.1|1073287_1074223_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZX96587.1|1074272_1076153_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AZX96588.1|1076219_1076564_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZX96589.1|1076708_1077845_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZX96590.1|1077841_1078915_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AZX96591.1|1079072_1080509_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZX99109.1|1080599_1081241_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX96592.1|1081576_1082593_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX96593.1|1082925_1085673_+	pertactin autotransporter	NA	NA	NA	NA	NA
AZX99110.1|1085739_1087161_-	siroheme synthase	NA	NA	NA	NA	NA
AZX96594.1|1087424_1088141_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96595.1|1088225_1088543_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AZX96596.1|1088583_1088997_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX96597.1|1088998_1089358_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96598.1|1089400_1090945_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
AZX96599.1|1091028_1091859_+	transglycosylase	NA	NA	NA	NA	NA
AZX96600.1|1091893_1093048_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AZX96601.1|1093090_1093963_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96602.1|1094079_1096368_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZX96603.1|1097574_1098039_+	barstar family protein 2	NA	NA	NA	NA	NA
AZX96604.1|1098065_1099016_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99111.1|1099383_1100160_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZX96605.1|1100204_1101062_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZX96606.1|1101083_1102100_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZX96607.1|1102234_1103275_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZX96608.1|1103469_1105551_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZX96609.1|1105786_1107280_+	exopolyphosphatase	NA	NA	NA	NA	NA
AZX96610.1|1107510_1108305_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX96611.1|1108525_1109884_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZX96612.1|1109880_1110723_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZX96613.1|1110741_1112628_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZX96614.1|1112865_1113498_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA	NA
AZX96615.1|1113516_1114119_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96616.1|1114270_1115221_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96617.1|1116023_1116824_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96618.1|1116867_1117854_-	homoserine kinase	NA	NA	NA	NA	NA
AZX96619.1|1117993_1119007_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZX96620.1|1119003_1119954_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96621.1|1120066_1120525_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AZX96622.1|1120561_1121875_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96623.1|1121892_1122264_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AZX96624.1|1122260_1123724_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AZX96625.1|1123816_1124593_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX96626.1|1124574_1127454_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AZX96627.1|1127636_1128587_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96628.1|1128754_1129579_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AZX96629.1|1129578_1130457_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX96630.1|1131361_1132477_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX96631.1|1132484_1133300_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AZX96632.1|1133296_1135162_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AZX96633.1|1135240_1135873_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX96634.1|1135869_1136172_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96635.1|1136214_1137735_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 11
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	1318916	1384345	4100921	transposase	Planktothrix_phage(33.33%)	55	NA	NA
AZX96776.1|1318916_1319867_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96777.1|1320635_1321274_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX99121.1|1322163_1322610_+	glutamate racemase	NA	NA	NA	NA	NA
AZX96778.1|1322691_1323393_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
AZX96779.1|1323393_1324161_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
AZX96780.1|1324157_1325396_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AZX96781.1|1325395_1326322_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AZX96782.1|1326424_1327540_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX96783.1|1327555_1328506_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96784.1|1328859_1329441_-	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
AZX96785.1|1329437_1330271_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AZX99122.1|1330481_1331795_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
AZX96786.1|1331971_1332853_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
AZX96787.1|1332872_1333724_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
AZX96788.1|1333776_1334865_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
AZX96789.1|1334975_1336103_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX99123.1|1336337_1336949_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX96790.1|1337047_1337998_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96791.1|1338096_1339047_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96792.1|1339268_1339646_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AZX99124.1|1339793_1340291_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AZX96793.1|1340287_1340815_+	RES domain-containing protein	NA	NA	NA	NA	NA
AZX96794.1|1340948_1341764_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX96795.1|1341776_1342958_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX96796.1|1343005_1343899_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
AZX99125.1|1344025_1344496_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96797.1|1344621_1345449_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
AZX96798.1|1345477_1346254_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AZX96799.1|1346250_1346544_-	biotin--protein ligase	NA	NA	NA	NA	NA
AZX96800.1|1346540_1347005_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX96801.1|1347016_1347802_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
AZX96802.1|1347827_1348328_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
AZX96803.1|1348410_1349589_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
AZX96804.1|1351216_1351552_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AZX96805.1|1351739_1353188_+	CoA transferase	NA	NA	NA	NA	NA
AZX96806.1|1353245_1353590_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
AZX96807.1|1353696_1354236_-	peroxiredoxin	NA	NA	NA	NA	NA
AZX96808.1|1354328_1355279_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96809.1|1355265_1355748_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96810.1|1356017_1356449_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96811.1|1356630_1357035_-	DoxX family protein	NA	NA	NA	NA	NA
AZX96812.1|1358271_1358595_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96813.1|1358597_1359485_-	aldo/keto reductase	NA	NA	NA	NA	NA
AZX96814.1|1359517_1359943_-	universal stress protein	NA	NA	NA	NA	NA
AZX96815.1|1360014_1360368_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96816.1|1360607_1361114_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96817.1|1361152_1362484_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
AZX96818.1|1362543_1363359_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AZX96819.1|1363355_1364210_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
AZX99126.1|1367272_1369816_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
AZX96820.1|1371182_1372937_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
AZX96821.1|1372933_1375054_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
AZX96822.1|1375058_1377254_-	1,4-alpha-glucan-branching protein	NA	NA	NA	NA	NA
AZX99127.1|1377250_1380592_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
AZX96823.1|1383394_1384345_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	1448943	1504431	4100921	transposase,protease	Mollivirus(16.67%)	56	NA	NA
AZX96874.1|1448943_1449894_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96875.1|1451095_1451542_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
AZX96876.1|1451534_1453010_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
AZX96877.1|1453006_1453762_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
AZX96878.1|1453754_1454765_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
AZX96879.1|1454754_1456431_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
AZX96880.1|1456743_1457076_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
AZX96881.1|1457089_1457485_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96882.1|1457494_1457821_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
AZX96883.1|1457817_1458144_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZX96884.1|1458070_1459093_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZX96885.1|1459089_1459470_-	flagellar protein FliT	NA	NA	NA	NA	NA
AZX96886.1|1459487_1459916_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
AZX96887.1|1459923_1461297_-	flagellar hook protein FliD	NA	NA	NA	NA	NA
AZX99132.1|1461437_1461815_-	flagellar protein	NA	NA	NA	NA	NA
AZX96888.1|1462077_1463385_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AZX96889.1|1463445_1464276_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX96890.1|1464272_1464761_+	colicin V synthesis protein	NA	NA	NA	NA	NA
AZX96891.1|1464802_1466323_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
AZX99133.1|1466366_1466843_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AZX96892.1|1467646_1470244_-	bifunctional uridylyltransferase/uridylyl-removing protein	NA	NA	NA	NA	NA
AZX96893.1|1470273_1471095_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
AZX96894.1|1471821_1472571_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
AZX96895.1|1472703_1473633_+	elongation factor Ts	NA	NA	NA	NA	NA
AZX96896.1|1473730_1474447_+	UMP kinase	NA	NA	NA	NA	NA
AZX96897.1|1474461_1475022_+	ribosome-recycling factor	NA	NA	NA	NA	NA
AZX96898.1|1475059_1475953_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	2.0e-18
AZX96899.1|1475972_1476830_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AZX96900.1|1476826_1478026_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AZX96901.1|1478065_1479400_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
AZX96902.1|1479452_1481789_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AZX99134.1|1481914_1482478_+	outer membrane protein chaperone	NA	NA	NA	NA	NA
AZX96903.1|1482486_1483578_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZX96904.1|1483649_1484105_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZX96905.1|1484105_1484900_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZX96906.1|1484896_1486078_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZX96907.1|1486064_1486670_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
AZX96908.1|1486666_1487440_+	RNA methyltransferase	NA	NA	NA	NA	NA
AZX96909.1|1487451_1488279_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA	NA
AZX96910.1|1488440_1490804_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
AZX96911.1|1490871_1491591_-	GMP synthase	NA	NA	NA	NA	NA
AZX96912.1|1491714_1492140_+	NfeD-like family protein 1	NA	NA	NA	NA	NA
AZX96913.1|1492174_1493125_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96914.1|1493242_1494169_+	paraslipin	NA	NA	NA	NA	NA
AZX96915.1|1494234_1495392_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AZX96916.1|1495372_1495840_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AZX96917.1|1495987_1496938_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96918.1|1496954_1497389_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AZX96919.1|1497378_1497729_+	RnfH family protein	NA	NA	NA	NA	NA
AZX96920.1|1497925_1499080_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX96921.1|1499076_1500249_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX96922.1|1500296_1501190_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX96923.1|1501235_1501673_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX96924.1|1501732_1502422_+	VIT family protein	NA	NA	NA	NA	NA
AZX96925.1|1502431_1503382_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96926.1|1503480_1504431_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	1543754	1601836	4100921	transposase,protease,tRNA	Planktothrix_phage(15.38%)	60	NA	NA
AZX96959.1|1543754_1544567_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AZX96960.1|1544711_1545806_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX96961.1|1546017_1546647_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX96962.1|1546649_1548317_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX96963.1|1548331_1548988_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AZX96964.1|1549467_1550418_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96965.1|1550444_1551218_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZX96966.1|1551229_1552471_+	MFS transporter	NA	NA	NA	NA	NA
AZX96967.1|1554252_1555203_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96968.1|1555234_1556332_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
AZX96969.1|1556328_1557279_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96970.1|1557700_1558093_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96971.1|1558098_1558875_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX96972.1|1559262_1561212_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
AZX96973.1|1561232_1561778_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
AZX96974.1|1561914_1562871_+	glutathione synthetase	NA	NA	NA	NA	NA
AZX96975.1|1562881_1563280_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AZX96976.1|1563395_1563665_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AZX96977.1|1563786_1565481_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AZX96978.1|1565645_1565870_-	hypothetical protein	NA	NA	NA	NA	NA
AZX96979.1|1566468_1567419_+	ornithine cyclodeaminase	NA	NA	NA	NA	NA
AZX96980.1|1567460_1568621_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX96981.1|1568781_1569702_+	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
AZX96982.1|1569714_1570356_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
AZX96983.1|1570352_1571024_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
AZX96984.1|1571020_1571791_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
AZX96985.1|1571889_1572840_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX96986.1|1573056_1573461_-	GFA family protein	NA	NA	NA	NA	NA
AZX96987.1|1573534_1574725_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZX96988.1|1574758_1575085_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AZX96989.1|1575107_1575623_-	transporter	NA	NA	NA	NA	NA
AZX96990.1|1575681_1576908_-	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	58.8	5.2e-134
AZX96991.1|1577085_1578216_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX96992.1|1578450_1579032_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
AZX96993.1|1579168_1580233_+	fructose-bisphosphate aldolase class II	NA	NA	NA	NA	NA
AZX96994.1|1580317_1580764_-	GFA family protein	NA	NA	NA	NA	NA
AZX96995.1|1580988_1581870_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	36.1	1.8e-51
AZX96996.1|1581924_1582176_+	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA	NA
AZX96997.1|1582178_1582580_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
AZX96998.1|1582599_1582836_+	hypothetical protein	NA	NA	NA	NA	NA
AZX96999.1|1582843_1583323_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
AZX97000.1|1583508_1583988_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.5	6.5e-16
AZX97001.1|1583990_1585181_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AZX97002.1|1585185_1586238_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	37.8	4.8e-35
AZX97003.1|1586374_1587397_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	40.7	1.6e-67
AZX97004.1|1587488_1588325_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97005.1|1588517_1589423_+	agmatinase	NA	NA	NA	NA	NA
AZX97006.1|1589449_1590241_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97007.1|1590263_1590956_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX97008.1|1590977_1591730_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	2.8e-29
AZX97009.1|1591858_1593418_+	acetolactate synthase large subunit	NA	NA	NA	NA	NA
AZX97010.1|1593449_1593995_+	acyl dehydratase	NA	NA	NA	NA	NA
AZX97011.1|1594132_1595389_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX97012.1|1595405_1597100_-	thiamine pyrophosphate-binding protein	NA	E5ERI2	Ostreococcus_lucimarinus_virus	24.5	3.8e-26
AZX97013.1|1597257_1598145_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.7	3.4e-18
AZX97014.1|1598182_1599115_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.5	2.3e-25
AZX97015.1|1599128_1599617_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AZX97016.1|1599734_1600313_+|protease	protease	protease	NA	NA	NA	NA
AZX97017.1|1600385_1600787_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AZX97018.1|1600885_1601836_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	1657036	1728190	4100921	transposase	Ectocarpus_siliculosus_virus(10.0%)	54	NA	NA
AZX97065.1|1657036_1657987_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97066.1|1658008_1659229_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
AZX97067.1|1659414_1660827_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AZX97068.1|1660890_1661958_+	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
AZX97069.1|1661954_1663445_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AZX99138.1|1663454_1664399_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97070.1|1664558_1665257_+	pirin family protein	NA	NA	NA	NA	NA
AZX97071.1|1665334_1666240_+	pirin family protein	NA	NA	NA	NA	NA
AZX97072.1|1666259_1667210_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97073.1|1667308_1668103_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
AZX97074.1|1668107_1669778_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX97075.1|1669901_1670951_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97076.1|1671272_1672049_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AZX97077.1|1672113_1673016_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97078.1|1674309_1675113_+	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
AZX97079.1|1677806_1678193_+	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
AZX97080.1|1678208_1680299_+	DNA helicase RecG	NA	NA	NA	NA	NA
AZX97081.1|1680350_1681304_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
AZX99139.1|1681318_1682206_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97082.1|1682343_1683870_+	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA	NA
AZX99140.1|1683968_1684469_+	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
AZX97083.1|1684792_1686748_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZX97084.1|1686915_1689000_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97085.1|1689026_1689812_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
AZX97086.1|1690667_1691438_+	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA	NA
AZX97087.1|1691437_1692178_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX97088.1|1692219_1693389_+	capsule biosynthesis protein	NA	NA	NA	NA	NA
AZX97089.1|1693420_1695505_+	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AZX97090.1|1695501_1696392_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZX97091.1|1696388_1697486_+	capsular polysaccharide export protein	NA	NA	NA	NA	NA
AZX97092.1|1697508_1698798_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
AZX97093.1|1698809_1699835_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
AZX97094.1|1699831_1701889_+	capsular polysaccharide export protein	NA	NA	NA	NA	NA
AZX97095.1|1701902_1703078_+	capsule biosynthesis protein CapA	NA	NA	NA	NA	NA
AZX97096.1|1703159_1704110_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97097.1|1704168_1704942_+	oxidoreductase	NA	NA	NA	NA	NA
AZX97098.1|1704934_1706491_+	LTA synthase family protein	NA	NA	NA	NA	NA
AZX97099.1|1706487_1707438_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97100.1|1708764_1709367_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97101.1|1709606_1710308_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX97102.1|1710301_1711084_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AZX97103.1|1711268_1712219_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97104.1|1712317_1713055_-	hypothetical protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AZX97105.1|1713244_1714003_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX97106.1|1714049_1715039_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX97107.1|1715216_1716185_-	transporter	NA	NA	NA	NA	NA
AZX97108.1|1717724_1718693_+	AAA family ATPase	NA	NA	NA	NA	NA
AZX97109.1|1718701_1719643_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AZX97110.1|1720116_1721127_+	hypothetical protein	NA	NA	NA	NA	NA
AZX99141.1|1721117_1722632_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AZX97111.1|1722628_1723975_+	hypothetical protein	NA	NA	NA	NA	NA
AZX99142.1|1723977_1725012_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AZX97112.1|1725061_1726687_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AZX97113.1|1727239_1728190_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	1748981	1810329	4100921	transposase,tRNA	uncultured_Caudovirales_phage(12.5%)	52	NA	NA
AZX97128.1|1748981_1749932_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97129.1|1750225_1750948_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZX97130.1|1751386_1752574_-	MFS transporter	NA	NA	NA	NA	NA
AZX97131.1|1752577_1752958_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97132.1|1754677_1755649_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX97133.1|1755662_1756376_+	NAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX97134.1|1756380_1757298_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97135.1|1757404_1757701_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97136.1|1757799_1758750_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97137.1|1759908_1762842_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AZX97138.1|1762841_1763186_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AZX97139.1|1763182_1764811_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AZX97140.1|1764807_1765287_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AZX97141.1|1765283_1765568_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AZX97142.1|1765564_1765891_+	cation:proton antiporter	NA	NA	NA	NA	NA
AZX97143.1|1766046_1766997_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97144.1|1767040_1767583_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97145.1|1767680_1768529_+	hydrolase	NA	NA	NA	NA	NA
AZX97146.1|1768521_1769028_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
AZX97147.1|1769024_1770026_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
AZX97148.1|1770038_1770833_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX97149.1|1770881_1772783_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX97150.1|1772779_1773403_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97151.1|1773529_1774654_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97152.1|1774971_1776639_+	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.6e-53
AZX97153.1|1776794_1777571_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
AZX97154.1|1777655_1778654_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97155.1|1778650_1779424_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX97156.1|1780408_1781359_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97157.1|1781382_1781847_-	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
AZX97158.1|1781993_1783202_+	flavohemoprotein	NA	NA	NA	NA	NA
AZX97159.1|1783212_1783683_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX97160.1|1783801_1785091_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZX97161.1|1787831_1788782_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97162.1|1788880_1789897_-	folate-binding protein	NA	NA	NA	NA	NA
AZX97163.1|1790063_1791110_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
AZX97164.1|1791106_1791733_+	thymidylate kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
AZX97165.1|1791729_1792782_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AZX97166.1|1792831_1793602_+	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZX97167.1|1793652_1794489_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97168.1|1794684_1795425_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97169.1|1795499_1796243_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97170.1|1796904_1797678_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
AZX99147.1|1798815_1800105_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
AZX97171.1|1801715_1802963_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZX97172.1|1802972_1804682_-	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
AZX97173.1|1804678_1805617_-	CoA ester lyase	NA	NA	NA	NA	NA
AZX97174.1|1805613_1806897_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX97175.1|1806900_1807383_-	TRAP transporter small permease	NA	NA	NA	NA	NA
AZX97176.1|1807383_1808370_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97177.1|1808542_1809262_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97178.1|1809378_1810329_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	1991514	2061166	4100921	transposase,tRNA	Staphylococcus_phage(16.67%)	56	NA	NA
AZX97309.1|1991514_1994172_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
AZX97310.1|1994249_1995452_-	MFS transporter	NA	NA	NA	NA	NA
AZX97311.1|1995448_1995961_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX99157.1|1996083_1996422_-	DNA-binding protein	NA	NA	NA	NA	NA
AZX97312.1|1996797_1997748_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97313.1|1997846_1998797_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97314.1|1998960_2000856_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
AZX97315.1|2000969_2001137_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
AZX97316.1|2001200_2001437_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
AZX97317.1|2001805_2003005_-	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA	NA
AZX97318.1|2004520_2005471_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97319.1|2005922_2006924_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97320.1|2007096_2007954_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX97321.1|2007950_2009213_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
AZX97322.1|2009313_2009688_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AZX97323.1|2009736_2010948_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX97324.1|2011032_2011803_+	spermidine synthase	NA	NA	NA	NA	NA
AZX97325.1|2011916_2012681_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX99158.1|2012796_2013933_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
AZX97326.1|2013929_2014736_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX97327.1|2016480_2017452_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX97328.1|2017608_2018121_+	superoxide dismutase [Cu-Zn] SodC1	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
AZX97329.1|2018279_2019254_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97330.1|2020254_2021049_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
AZX99159.1|2021074_2021881_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA	NA
AZX97331.1|2021991_2022582_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX97332.1|2022592_2023771_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97333.1|2023873_2024248_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX97334.1|2024500_2025832_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX97335.1|2025898_2029129_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX97336.1|2030619_2031366_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AZX97337.1|2031450_2031912_+	holo-ACP synthase	NA	NA	NA	NA	NA
AZX97338.1|2031949_2033008_+	beta-hexosaminidase	NA	NA	NA	NA	NA
AZX97339.1|2032970_2034800_+	UvrABC system protein C	NA	NA	NA	NA	NA
AZX97340.1|2034839_2035412_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AZX99160.1|2036836_2037748_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
AZX97341.1|2037976_2039299_+	isocitrate lyase	NA	NA	NA	NA	NA
AZX97342.1|2039658_2040294_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97343.1|2040253_2041204_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97344.1|2042074_2042947_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX97345.1|2043024_2044164_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97346.1|2044513_2045779_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA	NA
AZX97347.1|2045784_2046312_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
AZX97348.1|2046316_2047135_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX97349.1|2047134_2047857_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX97350.1|2047878_2048193_+	ferredoxin	NA	NA	NA	NA	NA
AZX97351.1|2048189_2049359_+	CoA transferase	NA	NA	NA	NA	NA
AZX97352.1|2049389_2050265_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX97353.1|2050261_2051581_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AZX97354.1|2051653_2052850_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZX97355.1|2052860_2054348_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97356.1|2056942_2057842_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97357.1|2057979_2058945_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX97358.1|2059043_2059994_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97359.1|2060037_2060229_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97360.1|2060215_2061166_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	2072662	2122058	4100921	transposase	Erysipelothrix_phage(16.67%)	44	NA	NA
AZX97372.1|2072662_2073613_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97373.1|2074750_2075047_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97374.1|2075221_2076574_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AZX97375.1|2076716_2077733_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX99162.1|2079712_2080726_-	flavin-nucleotide-binding protein	NA	NA	NA	NA	NA
AZX97376.1|2080812_2081718_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97377.1|2081874_2082219_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97378.1|2082376_2082835_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AZX97379.1|2082848_2085065_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZX97380.1|2085061_2086123_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97381.1|2086151_2087126_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX97382.1|2087077_2087896_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
AZX97383.1|2087908_2088517_-	peptidase S16	NA	NA	NA	NA	NA
AZX97384.1|2088691_2089087_+	VOC family protein	NA	NA	NA	NA	NA
AZX97385.1|2089105_2090545_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
AZX97386.1|2090573_2090921_+	GFA family protein	NA	NA	NA	NA	NA
AZX97387.1|2090939_2091890_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97388.1|2092542_2093493_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97389.1|2093576_2095394_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AZX97390.1|2095467_2096115_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97391.1|2096127_2097057_-	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX97392.1|2097226_2097691_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97393.1|2097938_2098619_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97394.1|2098667_2100359_+	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AZX97395.1|2100374_2100926_-	ATPase	NA	NA	NA	NA	NA
AZX97396.1|2100922_2101294_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX97397.1|2101406_2102243_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX97398.1|2102253_2102778_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
AZX97399.1|2102875_2103055_+	DUF3008 domain-containing protein	NA	NA	NA	NA	NA
AZX97400.1|2103184_2104216_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX97401.1|2104289_2104646_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
AZX99163.1|2104635_2105511_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZX97402.1|2105609_2106494_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97403.1|2106515_2107811_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AZX97404.1|2108759_2109410_+	flavodoxin family protein	NA	NA	NA	NA	NA
AZX99164.1|2109497_2111018_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZX97405.1|2111275_2113141_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX97406.1|2114186_2115137_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97407.1|2116109_2116469_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
AZX97408.1|2116456_2117893_-	dethiobiotin synthase	NA	NA	NA	NA	NA
AZX97409.1|2117889_2118543_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX97410.1|2118539_2119739_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AZX97411.1|2119836_2121111_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AZX97412.1|2121107_2122058_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	2133262	2266257	4100921	transposase,protease,tRNA	Klosneuvirus(12.5%)	113	NA	NA
AZX97426.1|2133262_2134213_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97427.1|2134172_2134586_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
AZX97428.1|2134870_2135170_+	hypothetical protein	NA	NA	NA	NA	NA
AZX99166.1|2135579_2137748_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
AZX97429.1|2138547_2140599_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
AZX97430.1|2140618_2140831_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AZX97431.1|2141108_2141648_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX97432.1|2141761_2143069_-	adenylosuccinate synthetase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
AZX97433.1|2143133_2144291_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AZX97434.1|2144474_2145374_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AZX97435.1|2145392_2146697_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AZX97436.1|2146662_2147769_-	GTPase HflX	NA	NA	NA	NA	NA
AZX97437.1|2147856_2148093_-	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AZX97438.1|2148231_2149302_-	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AZX97439.1|2149305_2150661_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AZX97440.1|2150687_2151848_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AZX97441.1|2151850_2152489_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97442.1|2152490_2153795_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX97443.1|2153835_2155131_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AZX97444.1|2155137_2155644_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX97445.1|2155640_2156789_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AZX97446.1|2156816_2157242_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
AZX97447.1|2157564_2160447_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
AZX97448.1|2160539_2161295_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
AZX97449.1|2162060_2163410_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZX97450.1|2163508_2164459_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97451.1|2164557_2165508_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97452.1|2165581_2166055_+	RidA family protein	NA	NA	NA	NA	NA
AZX97453.1|2166080_2167289_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AZX97454.1|2167285_2168059_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AZX97455.1|2168058_2168682_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AZX97456.1|2168847_2169108_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
AZX97457.1|2169411_2169993_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97458.1|2170059_2170314_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
AZX97459.1|2170300_2172925_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
AZX97460.1|2172996_2173815_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97461.1|2173811_2174417_-	prepilin-type cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
AZX97462.1|2174454_2175588_-	general secretion pathway protein	NA	NA	NA	NA	NA
AZX99167.1|2177303_2177678_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97463.1|2177775_2179050_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97464.1|2179053_2180631_-	lipoprotein	NA	NA	NA	NA	NA
AZX97465.1|2181537_2182893_-	amidase	NA	NA	NA	NA	NA
AZX97466.1|2182889_2184524_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
AZX97467.1|2184516_2185347_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX97468.1|2185364_2186309_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX97469.1|2186361_2187936_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97470.1|2187983_2188334_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97471.1|2189806_2190763_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97472.1|2190912_2192250_-	glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97473.1|2192254_2193511_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZX97474.1|2193706_2194753_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
AZX97475.1|2194810_2195179_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
AZX97476.1|2195309_2196182_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AZX97477.1|2196258_2197161_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97478.1|2198217_2199435_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
AZX97479.1|2200708_2201659_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97480.1|2201859_2202669_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX97481.1|2202793_2203744_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97482.1|2203740_2204634_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AZX97483.1|2204758_2204953_-	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AZX97484.1|2204952_2205294_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AZX97485.1|2205303_2207166_-	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AZX97486.1|2207295_2207808_-	co-chaperone protein HscB	NA	NA	NA	NA	NA
AZX97487.1|2207810_2208134_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AZX97488.1|2208135_2208546_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AZX97489.1|2208583_2209795_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AZX97490.1|2209812_2210325_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AZX97491.1|2210540_2211032_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AZX97492.1|2211284_2213321_-	UvrABC system protein B	NA	NA	NA	NA	NA
AZX97493.1|2213398_2214601_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZX97494.1|2214651_2215380_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
AZX97495.1|2216937_2217888_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97496.1|2218458_2218671_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97497.1|2218688_2219420_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97498.1|2219454_2220096_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX97499.1|2220088_2220805_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX97500.1|2222969_2223746_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX97501.1|2223767_2224925_-	thiolase	NA	NA	NA	NA	NA
AZX97502.1|2224921_2225353_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97503.1|2225349_2226153_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX97504.1|2226166_2226622_-	MaoC family dehydratase	NA	NA	NA	NA	NA
AZX97505.1|2226634_2227606_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX97506.1|2227671_2228895_-	CoA transferase	NA	NA	NA	NA	NA
AZX97507.1|2229122_2230073_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97508.1|2230196_2232650_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AZX97509.1|2232838_2234143_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AZX97510.1|2234247_2234901_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AZX97511.1|2234903_2236214_-	trigger factor	NA	NA	NA	NA	NA
AZX97512.1|2236392_2236971_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AZX97513.1|2237082_2237283_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AZX97514.1|2237628_2238195_-	DUF924 domain-containing protein	NA	NA	NA	NA	NA
AZX97515.1|2238278_2238482_-	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AZX97516.1|2238788_2239109_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97517.1|2239150_2239432_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97518.1|2239506_2240763_-	autotransporter Phg	NA	NA	NA	NA	NA
AZX97519.1|2241145_2241475_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX97520.1|2243045_2243867_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AZX97521.1|2243866_2245006_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AZX97522.1|2245012_2245909_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AZX97523.1|2245905_2247831_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AZX97524.1|2248190_2250803_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX97525.1|2250855_2253156_-	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AZX97526.1|2253152_2254361_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
AZX97527.1|2254622_2254997_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97528.1|2254993_2255944_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97529.1|2256042_2258037_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
AZX97530.1|2258096_2259062_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
AZX97531.1|2259051_2261913_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
AZX97532.1|2261915_2262422_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
AZX97533.1|2262526_2263735_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
AZX97534.1|2263736_2264675_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97535.1|2264836_2265310_+	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX97536.1|2265306_2266257_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	2542007	2606223	4100921	transposase,protease,tRNA	Salmonella_phage(16.67%)	60	NA	NA
AZX97764.1|2542007_2543495_-|protease	serine protease	protease	W5SAB9	Pithovirus	31.5	1.2e-07
AZX97765.1|2543532_2544594_-	siderophore-interacting protein	NA	NA	NA	NA	NA
AZX99180.1|2544590_2545091_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97766.1|2545103_2545703_-	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.1	2.2e-05
AZX97767.1|2545699_2546200_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97768.1|2546201_2547431_-	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA	NA
AZX97769.1|2547620_2547860_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	46.6	5.4e-11
AZX97770.1|2548042_2548795_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	6.9e-12
AZX97771.1|2548796_2549732_-	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA	NA
AZX97772.1|2549813_2550800_-	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
AZX97773.1|2550799_2551858_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
AZX97774.1|2551914_2552097_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
AZX99181.1|2552148_2552742_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
AZX97775.1|2552850_2553450_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AZX97776.1|2553446_2554157_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX97777.1|2554158_2554986_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
AZX97778.1|2556802_2558044_-	MFS transporter	NA	NA	NA	NA	NA
AZX97779.1|2558055_2558829_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZX97780.1|2558855_2559806_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97781.1|2559904_2560687_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX97782.1|2560775_2562002_-	transporter	NA	NA	NA	NA	NA
AZX97783.1|2562727_2564113_+	alcaligin biosynthesis enzyme	NA	NA	NA	NA	NA
AZX97784.1|2564131_2564737_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX97785.1|2564733_2566590_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AZX97786.1|2566586_2567387_+	siderophore ferric iron reductase	NA	NA	NA	NA	NA
AZX97787.1|2567401_2568595_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZX97788.1|2568662_2569637_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX97789.1|2569759_2570983_+	MFS transporter	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
AZX97790.1|2571093_2573298_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX97791.1|2573592_2574252_+	antibiotic resistance protein	NA	NA	NA	NA	NA
AZX97792.1|2574259_2574466_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97793.1|2574804_2575560_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX97794.1|2575575_2575737_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97795.1|2575830_2576346_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
AZX97796.1|2576618_2576936_+	virulence factor	NA	NA	NA	NA	NA
AZX97797.1|2577123_2577372_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97798.1|2577650_2579006_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
AZX97799.1|2579052_2580432_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
AZX97800.1|2580494_2581127_-	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AZX99182.1|2581126_2583487_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
AZX97801.1|2583528_2584488_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
AZX97802.1|2584474_2585161_+	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AZX97803.1|2585157_2585490_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AZX97804.1|2585605_2586556_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97805.1|2586654_2587605_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97806.1|2587601_2589668_-	cation acetate symporter	NA	NA	NA	NA	NA
AZX97807.1|2589667_2589940_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
AZX97808.1|2590634_2590724_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AZX97809.1|2590723_2592508_+	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AZX97810.1|2592531_2594697_+	K(+)-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
AZX97811.1|2594707_2595307_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
AZX97812.1|2598128_2598824_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
AZX97813.1|2598832_2599783_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97814.1|2599881_2601123_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97815.1|2601272_2602253_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97816.1|2602451_2603708_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
AZX97817.1|2603910_2604336_+	DUF1841 domain-containing protein	NA	NA	NA	NA	NA
AZX97818.1|2604377_2604740_-	cytochrome	NA	NA	NA	NA	NA
AZX97819.1|2604752_2605106_-	cytochrome C	NA	NA	NA	NA	NA
AZX97820.1|2605272_2606223_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	2685900	2726568	4100921	transposase,tRNA	Salmonella_phage(33.33%)	44	NA	NA
AZX97887.1|2685900_2686851_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97888.1|2686961_2687144_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97889.1|2687243_2687840_-	lipoprotein	NA	NA	NA	NA	NA
AZX97890.1|2688023_2689115_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97891.1|2689614_2690025_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97892.1|2690083_2690425_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
AZX97893.1|2690430_2692848_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX97894.1|2692860_2693883_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
AZX97895.1|2693957_2694317_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AZX97896.1|2694332_2694530_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AZX97897.1|2694865_2695816_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97898.1|2695802_2695991_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97899.1|2696010_2696460_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AZX97900.1|2696456_2697407_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97901.1|2697517_2698966_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX97902.1|2699080_2699362_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97903.1|2699465_2700416_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97904.1|2700660_2701374_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX97905.1|2701496_2701724_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX97906.1|2702018_2702657_-	DedA family protein	NA	NA	NA	NA	NA
AZX97907.1|2702729_2703800_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZX97908.1|2703796_2704747_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97909.1|2705162_2705687_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZX97910.1|2705690_2705960_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97911.1|2706158_2707220_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZX97912.1|2707303_2708938_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZX97913.1|2708939_2709743_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX97914.1|2709771_2710731_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX97915.1|2710734_2712249_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97916.1|2712285_2713290_-	peptidase M20	NA	NA	NA	NA	NA
AZX97917.1|2713297_2713546_-	hypothetical protein	NA	NA	NA	NA	NA
AZX97918.1|2713720_2714191_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZX97919.1|2714226_2714838_-	LysE family translocator	NA	NA	NA	NA	NA
AZX97920.1|2714868_2715492_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZX97921.1|2715572_2717105_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX97922.1|2717139_2718381_-	MFS transporter	NA	NA	NA	NA	NA
AZX97923.1|2718424_2719456_-	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZX97924.1|2719452_2720622_-	amine oxidase	NA	NA	NA	NA	NA
AZX97925.1|2720615_2721296_-	anti-sigma factor	NA	NA	NA	NA	NA
AZX97926.1|2721457_2722300_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97927.1|2722462_2723434_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX97928.1|2723605_2724484_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZX97929.1|2724506_2725577_-	FUSC family protein	NA	NA	NA	NA	NA
AZX97930.1|2725617_2726568_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	2782033	2854903	4100921	transposase,tRNA	Moraxella_phage(16.67%)	59	NA	NA
AZX97973.1|2782033_2782450_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AZX97974.1|2782560_2783193_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
AZX97975.1|2783221_2783665_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
AZX97976.1|2783686_2784778_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX97977.1|2784832_2785633_-	aldolase	NA	NA	NA	NA	NA
AZX97978.1|2785768_2786389_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX97979.1|2786528_2787002_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX97980.1|2788141_2789092_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97981.1|2789088_2796750_-	adhesin	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
AZX97982.1|2796990_2801037_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
AZX97983.1|2801349_2801931_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AZX97984.1|2801927_2803226_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX97985.1|2803305_2804334_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX97986.1|2804257_2804608_+	hypothetical protein	NA	NA	NA	NA	NA
AZX97987.1|2804594_2805545_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97988.1|2805541_2806492_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX97989.1|2806808_2807414_+	fimbrial protein FimX	NA	NA	NA	NA	NA
AZX97990.1|2807467_2808781_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AZX97991.1|2808855_2809326_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA	NA
AZX97992.1|2809325_2810114_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AZX97993.1|2810124_2811777_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AZX97994.1|2811864_2812815_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99193.1|2813976_2814483_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AZX97995.1|2814479_2815244_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AZX97996.1|2815259_2815544_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AZX97997.1|2815608_2816598_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AZX97998.1|2816769_2817699_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AZX97999.1|2817670_2818357_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AZX98000.1|2818390_2818936_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AZX98001.1|2818980_2820246_+	peptidase M48	NA	NA	NA	NA	NA
AZX98002.1|2820242_2821145_+	ribosome biogenesis GTPase	NA	NA	NA	NA	NA
AZX98003.1|2822326_2823271_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX98004.1|2823365_2824883_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX98005.1|2824924_2826553_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX98006.1|2826660_2827542_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98007.1|2830654_2831029_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AZX98008.1|2831053_2831392_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AZX98009.1|2831435_2833070_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AZX98010.1|2833108_2834455_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA	NA
AZX99194.1|2834562_2835984_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AZX98011.1|2836053_2836638_-	nitroreductase	NA	NA	NA	NA	NA
AZX98012.1|2836740_2837691_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98013.1|2837825_2838932_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98014.1|2838942_2840040_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AZX98015.1|2840184_2841390_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZX98016.1|2841396_2841918_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AZX98017.1|2841914_2842406_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AZX98018.1|2842402_2842654_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AZX99195.1|2842634_2843120_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AZX98019.1|2843255_2846717_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98020.1|2846713_2847619_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AZX98021.1|2847628_2848060_-	lipoprotein	NA	NA	NA	NA	NA
AZX99196.1|2848306_2848810_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AZX98022.1|2848821_2850288_+	MFS transporter	NA	NA	NA	NA	NA
AZX98023.1|2850362_2851238_-	hypothetical protein	NA	NA	NA	NA	NA
AZX99197.1|2851234_2852242_-	biotin synthase	NA	NA	NA	NA	NA
AZX98024.1|2852709_2853015_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX98025.1|2853105_2853696_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98026.1|2853886_2854903_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	2858046	2924857	4100921	transposase,protease	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
AZX98029.1|2858046_2858997_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98030.1|2859095_2860046_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98031.1|2860042_2860837_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZX98032.1|2860868_2861573_-	oxidoreductase	NA	NA	NA	NA	NA
AZX98033.1|2861647_2862448_-	SURF1 family protein	NA	NA	NA	NA	NA
AZX98034.1|2862444_2862852_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZX98035.1|2862848_2863490_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZX98036.1|2863482_2865504_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX98037.1|2866743_2868075_+	MFS transporter	NA	NA	NA	NA	NA
AZX98038.1|2868071_2869022_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98039.1|2870728_2871034_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98040.1|2871702_2872041_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX98041.1|2876594_2877197_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98042.1|2877293_2878583_+	MFS transporter	NA	NA	NA	NA	NA
AZX98043.1|2878640_2879372_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZX98044.1|2879368_2880172_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZX98045.1|2880168_2881257_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX98046.1|2881253_2882183_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX98047.1|2882331_2883477_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX98048.1|2883498_2884449_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98049.1|2884779_2888601_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX98050.1|2888757_2889426_-	lipoprotein	NA	NA	NA	NA	NA
AZX98051.1|2889430_2891104_-	MCE family protein	NA	NA	NA	NA	NA
AZX98052.1|2891122_2892442_-	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AZX98053.1|2892446_2894798_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZX99198.1|2894817_2896986_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZX98054.1|2896982_2902172_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZX98055.1|2902261_2902576_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZX98056.1|2902803_2903049_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZX98057.1|2903143_2903662_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZX98058.1|2903761_2904967_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZX98059.1|2905082_2906480_-	chloride channel protein EriC	NA	NA	NA	NA	NA
AZX98060.1|2906596_2907175_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZX98061.1|2907247_2908639_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZX98062.1|2908806_2909757_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98063.1|2910037_2910658_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZX98064.1|2910654_2911068_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZX98065.1|2911064_2912108_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZX98066.1|2912163_2912352_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98067.1|2912361_2913126_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZX98068.1|2913216_2913873_+	adenylate kinase	NA	NA	NA	NA	NA
AZX98069.1|2913964_2914723_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX98070.1|2914748_2916350_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZX98071.1|2916550_2917555_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZX98072.1|2917655_2917919_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZX98073.1|2918036_2918813_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZX98074.1|2919403_2920354_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98075.1|2922737_2923850_-	malate dehydrogenase	NA	NA	NA	NA	NA
AZX98076.1|2923906_2924857_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	2955243	2994432	4100921	transposase	Planktothrix_phage(50.0%)	38	NA	NA
AZX98105.1|2955243_2956194_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98106.1|2956180_2956426_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98107.1|2956314_2957211_-	inositol monophosphatase	NA	NA	NA	NA	NA
AZX98108.1|2959488_2961714_+	glycosyl hydrolase	NA	NA	NA	NA	NA
AZX98109.1|2961878_2962967_+	methionine import ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZX98110.1|2962923_2963577_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX98111.1|2963624_2964422_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX98112.1|2964953_2965904_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98113.1|2965984_2967133_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZX98114.1|2967189_2968140_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98115.1|2968126_2968345_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98116.1|2968238_2968544_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX98117.1|2968572_2969007_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX98118.1|2969008_2970253_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX98119.1|2970249_2970960_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX99200.1|2970974_2971886_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX98120.1|2972248_2972653_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98121.1|2972649_2973108_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98122.1|2973114_2974023_+	hypothetical protein	NA	NA	NA	NA	NA
AZX99201.1|2974019_2974886_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX98123.1|2974872_2975700_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX98124.1|2975710_2976838_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZX98125.1|2977915_2979154_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98126.1|2979195_2980458_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX98127.1|2980464_2981217_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX98128.1|2981268_2981454_-	hypothetical protein	NA	NA	NA	NA	NA
AZX99202.1|2981729_2982194_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZX98129.1|2982225_2982885_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZX98130.1|2983029_2985138_+	AsmA family protein	NA	NA	NA	NA	NA
AZX98131.1|2985134_2986085_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98132.1|2986188_2986809_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX99203.1|2986912_2987653_+	oxidoreductase	NA	NA	NA	NA	NA
AZX98133.1|2988787_2989912_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98134.1|2989957_2990326_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98135.1|2990567_2991518_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98136.1|2992553_2993096_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98137.1|2993300_2993495_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98138.1|2993481_2994432_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	3232445	3267283	4100921	transposase,holin	Erwinia_phage(20.0%)	36	NA	NA
AZX98324.1|3232445_3233396_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98325.1|3233840_3234152_-	cell division protein ZapA	NA	NA	NA	NA	NA
AZX98326.1|3234151_3234682_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98327.1|3234844_3235795_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98328.1|3236084_3236549_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZX98329.1|3236563_3238069_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZX98330.1|3238322_3239930_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX98331.1|3239985_3240891_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX98332.1|3241331_3242282_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98333.1|3242380_3243331_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98334.1|3243412_3243994_-	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA	NA
AZX99222.1|3244418_3244724_+	RND transporter	NA	NA	NA	NA	NA
AZX98335.1|3244737_3246072_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
AZX98336.1|3246093_3246633_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AZX98337.1|3246780_3247245_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
AZX98338.1|3247387_3248503_-	GTP-binding protein	NA	NA	NA	NA	NA
AZX98339.1|3248779_3249283_-	transcriptional repressor	NA	NA	NA	NA	NA
AZX98340.1|3249420_3249621_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98341.1|3249611_3250334_+	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
AZX98342.1|3250330_3251227_+	metal ABC transporter permease	NA	NA	NA	NA	NA
AZX98343.1|3251223_3252159_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX99223.1|3252164_3252788_+	DUF1007 domain-containing protein	NA	NA	NA	NA	NA
AZX98344.1|3252778_3253747_+	nickel transporter	NA	NA	NA	NA	NA
AZX98345.1|3253795_3255937_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX98346.1|3255949_3256930_-	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
AZX98347.1|3256944_3257637_-	DUF484 domain-containing protein	NA	NA	NA	NA	NA
AZX98348.1|3257663_3258575_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
AZX98349.1|3258617_3259508_-	acyltransferase	NA	NA	NA	NA	NA
AZX98350.1|3259504_3260359_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA	NA
AZX98351.1|3260507_3261806_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.9	1.6e-125
AZX98352.1|3261916_3262168_+	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AZX98353.1|3262247_3263288_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AZX98354.1|3263567_3264986_+	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
AZX98355.1|3265056_3265392_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX98356.1|3265391_3266234_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZX98357.1|3266332_3267283_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	3279112	3329991	4100921	transposase,protease,tRNA,integrase	Planktothrix_phage(33.33%)	40	3312787:3312805	3332675:3332693
AZX98365.1|3279112_3280063_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99226.1|3280375_3281854_+	phospholipase D family protein	NA	NA	NA	NA	NA
AZX98366.1|3281860_3282970_-	molybdenum import ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
AZX98367.1|3282981_3283662_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AZX98368.1|3283683_3284439_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX99227.1|3284574_3285459_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX98369.1|3285546_3286128_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98370.1|3286220_3286343_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98371.1|3286388_3286688_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX99228.1|3286839_3287265_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98372.1|3289471_3289975_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX98373.1|3289990_3290941_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98374.1|3290927_3291125_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98375.1|3291468_3292242_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX98376.1|3292374_3293385_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX98377.1|3293536_3295192_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX98378.1|3295246_3295588_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AZX98379.1|3295601_3297041_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX98380.1|3297173_3297989_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98381.1|3298007_3298196_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98382.1|3298182_3299133_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98383.1|3300520_3301468_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98384.1|3301694_3302435_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98385.1|3302520_3303471_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98386.1|3304912_3306484_-	winged helix family transcriptional regulator	NA	NA	NA	NA	NA
AZX98387.1|3306816_3308670_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98388.1|3308714_3311279_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZX98389.1|3311697_3312648_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
3312787:3312805	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
AZX98390.1|3315513_3316008_-	DUF4276 domain-containing protein	NA	NA	NA	NA	NA
AZX98391.1|3316024_3316975_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98392.1|3316961_3317162_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98393.1|3317158_3318370_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AZX98394.1|3318385_3321337_-	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
AZX98395.1|3321338_3324458_-	restriction endonuclease	NA	NA	NA	NA	NA
AZX99229.1|3324454_3324595_-	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZX98396.1|3324605_3325652_-	Fic family protein	NA	NA	NA	NA	NA
AZX98397.1|3325993_3327121_-|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
AZX98398.1|3327400_3328492_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
AZX98399.1|3328564_3329347_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AZX98400.1|3329343_3329991_-|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
3332675:3332693	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
>prophage 26
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	3378878	3432619	4100921	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
AZX98437.1|3378878_3379829_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98438.1|3380233_3380878_-	urease accessory protein UreG	NA	NA	NA	NA	NA
AZX98439.1|3380902_3381487_-	urease accessory protein UreF	NA	NA	NA	NA	NA
AZX98440.1|3381587_3382205_-	urease accessory protein UreE	NA	NA	NA	NA	NA
AZX98441.1|3382207_3383923_-	urease subunit alpha	NA	NA	NA	NA	NA
AZX98442.1|3383919_3384228_-	urease subunit beta	NA	NA	NA	NA	NA
AZX98443.1|3384244_3384880_-	urease accessory protein UreJ	NA	NA	NA	NA	NA
AZX98444.1|3384906_3385209_-	urease subunit gamma	NA	NA	NA	NA	NA
AZX98445.1|3385309_3386164_-	urease accessory protein UreD	NA	NA	NA	NA	NA
AZX98446.1|3386745_3387018_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AZX98447.1|3387435_3387843_-	GFA family protein	NA	NA	NA	NA	NA
AZX98448.1|3388212_3389007_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98449.1|3389107_3390343_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX98450.1|3390411_3391428_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX98451.1|3391424_3392816_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX98452.1|3392812_3394009_+	MFS transporter	NA	NA	NA	NA	NA
AZX98453.1|3394005_3395544_-	SpoVR family protein	NA	NA	NA	NA	NA
AZX98454.1|3395540_3396800_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98455.1|3398740_3399691_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98456.1|3400457_3401552_-	CoA transferase	NA	NA	NA	NA	NA
AZX98457.1|3401544_3402879_-	CoA ligase	NA	NA	NA	NA	NA
AZX98458.1|3402832_3403516_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98459.1|3403541_3404705_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX98460.1|3404701_3405703_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX98461.1|3405702_3406575_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX98462.1|3406571_3407321_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZX98463.1|3407317_3408109_-	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZX98464.1|3408105_3409245_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX98465.1|3409553_3410306_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX98466.1|3410339_3411122_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX98467.1|3411125_3411515_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX98468.1|3412654_3413518_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX98469.1|3413553_3414642_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98470.1|3414638_3415589_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98471.1|3415575_3415944_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98472.1|3415942_3418921_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98473.1|3419847_3420726_+	fatty acid desaturase	NA	NA	NA	NA	NA
AZX98474.1|3422674_3423625_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98475.1|3423621_3424089_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZX98476.1|3424131_3424902_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX98477.1|3424922_3425723_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZX98478.1|3425733_3427143_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZX98479.1|3427237_3428023_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX98480.1|3428262_3429279_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX98481.1|3429386_3429779_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZX98482.1|3429916_3430597_+	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AZX98483.1|3430601_3431600_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX98484.1|3431668_3432619_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	3438774	3498074	4100921	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
AZX98488.1|3438774_3440538_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AZX98489.1|3440649_3441528_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZX98490.1|3441640_3442456_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZX98491.1|3442459_3442711_+	cell division topological specificity factor	NA	NA	NA	NA	NA
AZX98492.1|3442795_3443812_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX98493.1|3444142_3444364_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98494.1|3446724_3447642_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX98495.1|3448139_3449348_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX98496.1|3449427_3450999_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX98497.1|3451116_3452052_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZX98498.1|3452240_3453185_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZX98499.1|3453253_3453469_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98500.1|3453752_3459470_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZX98501.1|3459475_3460603_+	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZX98502.1|3460658_3461285_+	aminotransferase	NA	NA	NA	NA	NA
AZX98503.1|3461556_3462573_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX98504.1|3462668_3463379_-	oxidoreductase	NA	NA	NA	NA	NA
AZX99232.1|3463375_3464365_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX99233.1|3464496_3466092_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZX98505.1|3466094_3466832_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98506.1|3466987_3467860_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZX98507.1|3468128_3469349_+	MFS transporter	NA	NA	NA	NA	NA
AZX98508.1|3469345_3470005_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX98509.1|3470076_3470709_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZX98510.1|3470738_3471257_+	flavin reductase	NA	NA	NA	NA	NA
AZX98511.1|3471267_3472377_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX98512.1|3472423_3473278_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZX98513.1|3473279_3474182_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98514.1|3475404_3476355_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98515.1|3478111_3479101_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98516.1|3479276_3480065_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZX98517.1|3480061_3481093_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZX98518.1|3481111_3481675_-	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZX98519.1|3481730_3483251_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZX98520.1|3483514_3484219_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX98521.1|3484226_3484964_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZX98522.1|3485069_3485444_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZX98523.1|3485486_3486776_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98524.1|3486772_3487942_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZX98525.1|3487938_3488778_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZX98526.1|3488837_3489773_+	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZX98527.1|3489785_3490736_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98528.1|3490834_3491797_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZX98529.1|3491828_3492188_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZX98530.1|3492312_3493215_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZX98531.1|3493216_3494989_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
AZX98532.1|3495023_3495800_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX98533.1|3497123_3498074_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	3513012	3571085	4100921	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
AZX98545.1|3513012_3513963_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98546.1|3514091_3515225_-	peptidase	NA	NA	NA	NA	NA
AZX98547.1|3515268_3516174_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX98548.1|3516176_3517877_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
AZX98549.1|3517873_3518794_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX98550.1|3518801_3519779_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX98551.1|3519837_3520872_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZX98552.1|3522846_3523083_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98553.1|3523209_3524073_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZX98554.1|3524161_3524983_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX98555.1|3525062_3525800_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX98556.1|3525796_3526789_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AZX98557.1|3526902_3527565_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98558.1|3527609_3528758_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX98559.1|3531081_3532032_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98560.1|3532372_3533323_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98561.1|3533421_3534372_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98562.1|3534668_3535166_+	hypothetical protein	NA	NA	NA	NA	NA
AZX98563.1|3535208_3536984_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AZX99236.1|3537030_3537858_+	copper resistance protein B	NA	NA	NA	NA	NA
AZX98564.1|3537864_3538599_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX98565.1|3539768_3540563_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX98566.1|3540852_3541443_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX98567.1|3541476_3542805_-	amidase	NA	NA	NA	NA	NA
AZX98568.1|3542879_3544025_-	transporter	NA	NA	NA	NA	NA
AZX98569.1|3544136_3545135_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98570.1|3545097_3545532_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AZX98571.1|3547048_3547933_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX98572.1|3547929_3549135_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZX98573.1|3549131_3549992_-	endonuclease	NA	NA	NA	NA	NA
AZX98574.1|3550104_3551895_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AZX98575.1|3551935_3552601_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
AZX98576.1|3552601_3552910_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
AZX99237.1|3553075_3554362_-	hypothetical protein	NA	NA	NA	NA	NA
AZX98577.1|3555795_3556746_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98578.1|3558697_3559912_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AZX98579.1|3560017_3561007_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AZX98580.1|3561003_3561612_+	hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AZX98581.1|3561624_3562254_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AZX98582.1|3562250_3562871_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AZX98583.1|3562902_3563694_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AZX98584.1|3564536_3565001_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZX98585.1|3565019_3565946_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZX98586.1|3565999_3567286_-	cytochrome c	NA	NA	NA	NA	NA
AZX98587.1|3568216_3569089_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AZX98588.1|3569085_3570036_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AZX98589.1|3570134_3571085_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
CP025379	Bordetella pertussis strain I188 chromosome, complete genome	4100921	3998941	4063853	4100921	transposase	Planktothrix_phage(40.0%)	58	NA	NA
AZX98972.1|3998941_3999427_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98973.1|3999645_4000626_+	protein BugT	NA	NA	NA	NA	NA
AZX98974.1|4000892_4001702_+	Pertussis toxin subunit 1	NA	NA	NA	NA	NA
AZX98975.1|4001741_4002422_+	Pertussis toxin subunit 2	NA	NA	NA	NA	NA
AZX98976.1|4002415_4002874_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
AZX98977.1|4002885_4003248_+	Pertussis toxin subunit 5	NA	NA	NA	NA	NA
AZX98978.1|4003330_4004014_+	Pertussis toxin subunit 3	NA	NA	NA	NA	NA
AZX98979.1|4004069_4004378_+	type IV secretion protein A	NA	NA	NA	NA	NA
AZX98980.1|4004396_4004711_+	type IV secretion protein B	NA	NA	NA	NA	NA
AZX98981.1|4004707_4007182_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
AZX98982.1|4007189_4008581_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
AZX98983.1|4008577_4008763_+	type IV secretion protein I	NA	NA	NA	NA	NA
AZX98984.1|4008741_4009443_+	type IV secretion protein E	NA	NA	NA	NA	NA
AZX98985.1|4009439_4010261_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
AZX99259.1|4010241_4011366_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
AZX98986.1|4011358_4012378_+	type IV secretion protein H	NA	NA	NA	NA	NA
AZX98987.1|4012583_4013618_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX99260.1|4013718_4014510_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX98988.1|4014592_4014967_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
AZX98989.1|4014944_4016354_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
AZX98990.1|4016346_4017729_+	DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
AZX98991.1|4018063_4019668_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX98992.1|4019703_4020717_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX98993.1|4020727_4021654_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX98994.1|4022044_4022995_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98995.1|4023164_4024391_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
AZX98996.1|4024590_4025457_+	DUF815 domain-containing protein	NA	NA	NA	NA	NA
AZX98997.1|4025449_4026412_+	NUDIX domain-containing protein	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
AZX98998.1|4026512_4027463_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX98999.1|4027561_4028512_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99000.1|4028610_4029561_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX99001.1|4029557_4031051_-	RND transporter	NA	NA	NA	NA	NA
AZX99002.1|4031047_4034155_-	multidrug transporter subunit MdtC	NA	NA	NA	NA	NA
AZX99003.1|4034151_4037220_-	multidrug transporter subunit MdtB	NA	NA	NA	NA	NA
AZX99004.1|4037216_4038467_-	multidrug transporter subunit MdtA	NA	NA	NA	NA	NA
AZX99005.1|4038647_4039409_-	cell division protein ZapD	NA	NA	NA	NA	NA
AZX99006.1|4039441_4040092_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AZX99007.1|4040094_4040934_-	prepilin peptidase	NA	NA	NA	NA	NA
AZX99008.1|4041174_4041918_+	hypothetical protein	NA	NA	NA	NA	NA
AZX99009.1|4042000_4042348_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZX99010.1|4042445_4043288_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZX99011.1|4043332_4044220_-	segregation/condensation protein A	NA	NA	NA	NA	NA
AZX99012.1|4044246_4044435_-	DUF3460 domain-containing protein	NA	NA	NA	NA	NA
AZX99013.1|4044532_4045990_+	MFS transporter	NA	NA	NA	NA	NA
AZX99014.1|4045976_4047503_+	glycerol kinase	NA	NA	NA	NA	NA
AZX99015.1|4047521_4047989_-	hypothetical protein	NA	NA	NA	NA	NA
AZX99016.1|4047988_4049011_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX99017.1|4049131_4049872_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
AZX99018.1|4049926_4051027_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX99019.1|4051028_4052219_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX99020.1|4052338_4053355_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
AZX99021.1|4053673_4054345_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
AZX99022.1|4054341_4055250_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX99023.1|4055461_4056109_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AZX99024.1|4059960_4061037_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AZX99025.1|4061047_4061857_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX99026.1|4061946_4062720_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX99027.1|4062902_4063853_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
